Query 007932
Match_columns 584
No_of_seqs 162 out of 2512
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 17:15:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007932.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007932hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.6E-44 3.4E-49 390.7 36.5 536 12-560 18-568 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.6E-36 5.6E-41 310.9 31.5 464 18-554 11-489 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3.7E-35 8.1E-40 317.6 35.2 458 24-556 10-480 (489)
4 PRK15462 dipeptide/tripeptide 100.0 1.4E-33 3E-38 301.2 34.2 462 25-557 6-484 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 2.3E-33 5.1E-38 303.3 33.6 451 24-555 6-471 (475)
6 PRK09584 tppB putative tripept 100.0 1.5E-32 3.2E-37 298.8 34.0 454 24-556 17-483 (500)
7 PRK05122 major facilitator sup 99.9 5.1E-24 1.1E-28 225.9 29.2 374 26-550 13-387 (399)
8 PRK03545 putative arabinose tr 99.9 1.9E-24 4E-29 228.6 23.9 374 25-552 6-380 (390)
9 PRK12382 putative transporter; 99.9 1.4E-23 3E-28 222.0 28.0 375 25-550 12-387 (392)
10 PRK11646 multidrug resistance 99.9 1.8E-23 3.9E-28 221.8 25.4 169 31-227 13-181 (400)
11 COG2814 AraJ Arabinose efflux 99.9 1.2E-22 2.7E-27 208.0 28.3 379 22-552 7-386 (394)
12 PRK11551 putative 3-hydroxyphe 99.9 4.6E-23 9.9E-28 219.0 25.7 356 25-509 12-368 (406)
13 TIGR01299 synapt_SV2 synaptic 99.9 6.8E-23 1.5E-27 229.1 27.9 170 34-231 173-355 (742)
14 TIGR00903 2A0129 major facilit 99.9 5.1E-23 1.1E-27 215.4 24.0 161 41-230 4-164 (368)
15 PRK10489 enterobactin exporter 99.9 4.7E-23 1E-27 219.9 23.8 385 31-557 20-404 (417)
16 PLN00028 nitrate transmembrane 99.9 1E-22 2.2E-27 220.8 26.5 176 26-230 34-218 (476)
17 PRK10504 putative transporter; 99.9 1.3E-22 2.8E-27 220.0 27.0 178 27-232 9-186 (471)
18 PRK11663 regulatory protein Uh 99.9 6.1E-23 1.3E-27 220.2 24.1 168 29-224 24-191 (434)
19 PRK10054 putative transporter; 99.9 3E-23 6.5E-28 219.7 20.8 178 24-229 3-180 (395)
20 PRK10077 xylE D-xylose transpo 99.9 4.3E-23 9.3E-28 224.1 22.6 188 26-229 10-213 (479)
21 PRK09556 uhpT sugar phosphate 99.9 3E-23 6.4E-28 224.8 21.2 156 52-229 52-210 (467)
22 TIGR00926 2A1704 Peptide:H+ sy 99.9 3.1E-23 6.6E-28 229.1 21.3 336 42-430 1-343 (654)
23 PRK14995 methyl viologen resis 99.9 9.2E-23 2E-27 222.4 22.5 399 27-510 5-412 (495)
24 PRK10213 nepI ribonucleoside t 99.9 2.7E-22 6E-27 212.3 24.6 177 20-224 12-188 (394)
25 TIGR00892 2A0113 monocarboxyla 99.9 8.5E-23 1.9E-27 220.2 21.0 150 53-230 43-193 (455)
26 TIGR00893 2A0114 d-galactonate 99.9 1.2E-22 2.5E-27 213.3 21.4 154 49-229 14-167 (399)
27 PRK09705 cynX putative cyanate 99.9 4.6E-22 1E-26 210.6 25.9 366 36-556 17-385 (393)
28 TIGR00894 2A0114euk Na(+)-depe 99.9 9.1E-23 2E-27 220.9 20.6 149 58-231 70-219 (465)
29 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.4E-22 5.1E-27 214.1 23.4 178 25-230 5-188 (412)
30 TIGR00879 SP MFS transporter, 99.9 6.2E-23 1.4E-27 221.4 19.2 145 62-230 69-216 (481)
31 TIGR00900 2A0121 H+ Antiporter 99.9 2.3E-22 5.1E-27 209.3 22.2 359 32-510 3-362 (365)
32 PRK09874 drug efflux system pr 99.9 4E-22 8.6E-27 211.7 24.2 378 28-551 14-397 (408)
33 TIGR00890 2A0111 Oxalate/Forma 99.9 2E-22 4.2E-27 210.7 20.9 349 31-509 6-355 (377)
34 PRK10406 alpha-ketoglutarate t 99.9 6.3E-22 1.4E-26 212.2 25.1 176 28-223 22-211 (432)
35 COG2271 UhpC Sugar phosphate p 99.9 5.2E-22 1.1E-26 200.7 21.7 181 23-230 20-205 (448)
36 PRK15402 multidrug efflux syst 99.9 9.9E-22 2.1E-26 208.9 25.3 174 28-229 10-186 (406)
37 TIGR00891 2A0112 putative sial 99.9 6.9E-22 1.5E-26 209.1 23.6 174 22-223 6-181 (405)
38 TIGR00887 2A0109 phosphate:H+ 99.9 2.6E-21 5.6E-26 211.5 27.3 184 26-231 14-225 (502)
39 PRK10642 proline/glycine betai 99.9 1.1E-21 2.3E-26 213.8 24.2 176 27-222 15-204 (490)
40 PRK11273 glpT sn-glycerol-3-ph 99.9 1E-21 2.2E-26 211.9 22.1 156 49-228 49-205 (452)
41 PRK10091 MFS transport protein 99.9 2.2E-21 4.7E-26 204.6 24.0 173 27-227 2-174 (382)
42 PRK03699 putative transporter; 99.9 5.9E-21 1.3E-25 202.2 27.3 175 24-226 3-178 (394)
43 PF07690 MFS_1: Major Facilita 99.9 2.3E-22 5E-27 208.4 15.7 166 34-226 2-167 (352)
44 TIGR00899 2A0120 sugar efflux 99.9 3.5E-21 7.7E-26 201.8 24.5 169 34-229 3-174 (375)
45 TIGR00711 efflux_EmrB drug res 99.9 9.4E-22 2E-26 213.8 20.6 399 30-510 4-409 (485)
46 PRK12307 putative sialic acid 99.9 3.1E-21 6.8E-26 206.3 23.9 167 25-219 15-181 (426)
47 TIGR00895 2A0115 benzoate tran 99.9 2.1E-21 4.5E-26 204.6 22.3 175 26-228 15-189 (398)
48 cd06174 MFS The Major Facilita 99.9 4.3E-21 9.4E-26 198.2 23.3 347 31-548 2-348 (352)
49 PRK09952 shikimate transporter 99.9 1.2E-20 2.5E-25 202.7 26.6 177 25-221 19-210 (438)
50 PRK11195 lysophospholipid tran 99.9 9E-21 2E-25 200.7 24.8 165 28-224 3-167 (393)
51 TIGR00710 efflux_Bcr_CflA drug 99.9 8.1E-21 1.8E-25 199.7 23.9 175 27-229 4-178 (385)
52 TIGR00898 2A0119 cation transp 99.9 6.2E-21 1.3E-25 208.7 23.8 148 54-231 114-264 (505)
53 PRK03893 putative sialic acid 99.9 6.9E-21 1.5E-25 207.8 22.9 168 24-219 16-183 (496)
54 PRK15011 sugar efflux transpor 99.9 2.9E-20 6.4E-25 196.8 26.8 183 21-229 8-192 (393)
55 TIGR00881 2A0104 phosphoglycer 99.9 4.1E-21 8.8E-26 200.9 19.7 151 51-228 17-168 (379)
56 PRK03633 putative MFS family t 99.9 2.1E-20 4.5E-25 197.1 24.6 156 27-210 5-160 (381)
57 KOG1330 Sugar transporter/spin 99.9 8.5E-22 1.8E-26 200.9 13.0 183 23-233 28-211 (493)
58 PRK09528 lacY galactoside perm 99.9 1.8E-20 3.8E-25 200.3 23.6 391 28-552 10-403 (420)
59 PRK11652 emrD multidrug resist 99.9 3.3E-20 7.1E-25 196.4 25.0 173 25-225 5-177 (394)
60 PRK15034 nitrate/nitrite trans 99.9 2E-20 4.4E-25 198.2 23.0 189 18-230 21-231 (462)
61 KOG2532 Permease of the major 99.9 3.1E-21 6.8E-26 205.5 17.0 368 58-552 67-447 (466)
62 TIGR00897 2A0118 polyol permea 99.9 9.5E-20 2.1E-24 193.5 27.9 171 24-218 9-180 (402)
63 PRK15403 multidrug efflux syst 99.9 9.2E-20 2E-24 194.2 27.4 148 55-229 42-189 (413)
64 PF05977 MFS_3: Transmembrane 99.9 1.1E-19 2.3E-24 197.0 27.2 358 28-510 10-368 (524)
65 PRK15075 citrate-proton sympor 99.9 5.7E-20 1.2E-24 197.2 23.5 173 26-218 13-199 (434)
66 KOG0569 Permease of the major 99.9 2E-20 4.3E-25 197.3 18.8 402 66-568 62-470 (485)
67 TIGR00712 glpT glycerol-3-phos 99.8 3.9E-20 8.4E-25 198.8 19.8 155 51-229 49-204 (438)
68 PRK11043 putative transporter; 99.8 2E-19 4.3E-24 190.9 24.6 148 55-229 32-179 (401)
69 PRK10473 multidrug efflux syst 99.8 3.9E-19 8.5E-24 188.0 26.1 170 31-228 6-175 (392)
70 PRK11102 bicyclomycin/multidru 99.8 2E-19 4.3E-24 189.0 23.6 159 43-229 6-164 (377)
71 TIGR00902 2A0127 phenyl propri 99.8 1.3E-18 2.8E-23 183.6 28.6 342 31-510 7-354 (382)
72 TIGR00792 gph sugar (Glycoside 99.8 5E-19 1.1E-23 189.8 25.2 356 37-512 8-381 (437)
73 PRK10133 L-fucose transporter; 99.8 9.1E-19 2E-23 187.8 26.8 158 22-204 20-177 (438)
74 TIGR00882 2A0105 oligosacchari 99.8 8.4E-19 1.8E-23 185.8 26.1 180 28-229 2-181 (396)
75 TIGR00886 2A0108 nitrite extru 99.8 8.4E-20 1.8E-24 190.9 17.0 164 29-219 2-176 (366)
76 COG2223 NarK Nitrate/nitrite t 99.8 1.2E-18 2.5E-23 176.8 24.0 392 24-555 10-404 (417)
77 TIGR00889 2A0110 nucleoside tr 99.8 5E-18 1.1E-22 181.1 30.3 388 32-554 6-404 (418)
78 KOG0254 Predicted transporter 99.8 1.5E-18 3.3E-23 190.0 26.6 405 65-566 90-497 (513)
79 PRK08633 2-acyl-glycerophospho 99.8 1.6E-18 3.4E-23 208.1 28.4 155 28-206 9-165 (1146)
80 PRK06814 acylglycerophosphoeth 99.8 9.2E-19 2E-23 209.8 25.7 369 34-509 21-394 (1140)
81 PF00854 PTR2: POT family; In 99.8 6.7E-21 1.5E-25 200.1 4.1 366 95-494 1-369 (372)
82 PRK11010 ampG muropeptide tran 99.8 8.5E-18 1.8E-22 182.9 27.2 181 23-229 7-193 (491)
83 PRK11128 putative 3-phenylprop 99.8 9.8E-18 2.1E-22 176.8 25.8 157 35-223 11-171 (382)
84 TIGR00883 2A0106 metabolite-pr 99.8 5.1E-18 1.1E-22 178.4 20.7 165 40-224 5-184 (394)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 2.1E-17 4.6E-22 175.7 23.6 172 30-226 5-202 (410)
86 KOG0252 Inorganic phosphate tr 99.8 5.9E-18 1.3E-22 172.1 17.8 439 28-565 41-510 (538)
87 TIGR00896 CynX cyanate transpo 99.8 4.5E-18 9.7E-23 177.4 17.3 327 47-512 19-349 (355)
88 KOG2615 Permease of the major 99.8 9.1E-17 2E-21 159.9 21.0 117 61-205 65-181 (451)
89 TIGR00901 2A0125 AmpG-related 99.7 1.1E-16 2.4E-21 167.0 20.6 157 48-229 7-176 (356)
90 TIGR01301 GPH_sucrose GPH fami 99.7 8.9E-16 1.9E-20 163.9 25.8 443 28-555 4-474 (477)
91 PF00083 Sugar_tr: Sugar (and 99.7 1E-20 2.2E-25 203.9 -12.3 142 65-230 47-191 (451)
92 PRK11902 ampG muropeptide tran 99.7 2.6E-15 5.7E-20 159.5 29.1 165 36-226 7-177 (402)
93 TIGR00805 oat sodium-independe 99.7 1.8E-16 3.9E-21 176.8 20.9 200 25-231 29-281 (633)
94 KOG0253 Synaptic vesicle trans 99.7 1.3E-15 2.8E-20 150.7 23.3 422 39-558 88-525 (528)
95 PRK09669 putative symporter Ya 99.7 8.7E-16 1.9E-20 165.3 23.2 176 31-226 12-199 (444)
96 KOG0255 Synaptic vesicle trans 99.7 1E-15 2.2E-20 168.2 23.9 140 57-226 111-250 (521)
97 PRK10429 melibiose:sodium symp 99.7 1.9E-15 4.1E-20 164.0 24.5 366 33-513 11-395 (473)
98 TIGR00788 fbt folate/biopterin 99.7 9.5E-15 2.1E-19 157.9 29.2 386 26-512 23-414 (468)
99 KOG3764 Vesicular amine transp 99.7 1.2E-16 2.5E-21 160.1 12.4 149 58-232 100-248 (464)
100 PTZ00207 hypothetical protein; 99.7 1.6E-14 3.5E-19 157.5 30.1 159 44-228 43-202 (591)
101 PRK09848 glucuronide transport 99.7 6.6E-15 1.4E-19 158.7 25.5 155 30-202 10-173 (448)
102 TIGR00806 rfc RFC reduced fola 99.7 1.1E-15 2.5E-20 159.3 18.5 174 26-230 24-202 (511)
103 PF13347 MFS_2: MFS/sugar tran 99.7 2.2E-15 4.7E-20 161.5 21.3 357 37-513 10-386 (428)
104 TIGR02718 sider_RhtX_FptX side 99.7 2.7E-14 5.9E-19 151.0 27.3 177 30-230 3-183 (390)
105 KOG2504 Monocarboxylate transp 99.7 5.1E-15 1.1E-19 159.9 20.0 421 30-551 44-475 (509)
106 PF03825 Nuc_H_symport: Nucleo 99.7 8.7E-14 1.9E-18 146.7 28.7 376 37-554 11-397 (400)
107 PF06609 TRI12: Fungal trichot 99.7 4.2E-14 9.2E-19 153.3 26.7 151 50-229 65-215 (599)
108 COG0738 FucP Fucose permease [ 99.6 1.9E-14 4.1E-19 145.4 20.9 154 28-205 12-165 (422)
109 KOG2533 Permease of the major 99.6 5.4E-14 1.2E-18 150.6 22.7 150 56-232 73-228 (495)
110 COG2807 CynX Cyanate permease 99.6 3E-13 6.5E-18 134.9 21.7 346 30-513 14-361 (395)
111 PRK11462 putative transporter; 99.6 2.5E-13 5.5E-18 146.7 22.6 174 32-224 13-197 (460)
112 PF01306 LacY_symp: LacY proto 99.6 4.1E-14 8.9E-19 146.9 15.6 387 28-553 7-401 (412)
113 COG2211 MelB Na+/melibiose sym 99.5 8.7E-12 1.9E-16 131.0 28.0 369 27-513 11-398 (467)
114 PRK15011 sugar efflux transpor 99.5 1.5E-12 3.4E-17 137.8 17.3 176 26-229 214-389 (393)
115 PRK10642 proline/glycine betai 99.5 1.2E-12 2.6E-17 142.8 16.4 182 26-231 248-430 (490)
116 KOG4686 Predicted sugar transp 99.4 8E-14 1.7E-18 133.4 4.9 134 51-207 66-199 (459)
117 COG2271 UhpC Sugar phosphate p 99.4 2.5E-12 5.4E-17 130.9 13.8 179 28-230 252-433 (448)
118 PF11700 ATG22: Vacuole efflux 99.4 9.5E-11 2.1E-15 126.1 26.6 84 451-549 382-465 (477)
119 TIGR00890 2A0111 Oxalate/Forma 99.4 5.4E-12 1.2E-16 131.7 13.4 170 28-223 205-374 (377)
120 PF03209 PUCC: PUCC protein; 99.4 2.7E-10 5.8E-15 116.7 25.1 379 55-549 6-395 (403)
121 PRK09556 uhpT sugar phosphate 99.4 5.8E-12 1.3E-16 136.6 13.7 176 28-228 258-446 (467)
122 TIGR00883 2A0106 metabolite-pr 99.4 7.7E-12 1.7E-16 131.4 14.1 171 25-220 216-390 (394)
123 PRK05122 major facilitator sup 99.4 7.8E-12 1.7E-16 132.5 14.1 173 37-239 225-397 (399)
124 TIGR00899 2A0120 sugar efflux 99.3 1.3E-11 2.8E-16 129.3 15.2 171 30-228 201-371 (375)
125 KOG2325 Predicted transporter/ 99.3 3.2E-12 7E-17 134.4 9.7 195 16-233 22-231 (488)
126 PRK03699 putative transporter; 99.3 1.4E-11 2.9E-16 130.6 14.2 172 28-227 205-376 (394)
127 PRK09952 shikimate transporter 99.3 1.8E-11 3.8E-16 131.7 14.7 182 26-230 248-432 (438)
128 cd06174 MFS The Major Facilita 99.3 2.4E-11 5.2E-16 125.3 14.4 173 28-227 175-348 (352)
129 PRK03893 putative sialic acid 99.3 7.6E-11 1.6E-15 128.7 18.3 149 46-219 293-441 (496)
130 PRK09874 drug efflux system pr 99.3 4.4E-11 9.5E-16 126.9 15.8 166 37-229 228-396 (408)
131 TIGR01299 synapt_SV2 synaptic 99.3 2.3E-11 5E-16 136.8 13.7 134 69-230 600-733 (742)
132 PRK09528 lacY galactoside perm 99.3 3.7E-11 8.1E-16 128.3 14.7 172 31-229 226-401 (420)
133 TIGR00902 2A0127 phenyl propri 99.3 5.2E-11 1.1E-15 125.6 15.2 169 28-226 205-374 (382)
134 TIGR00889 2A0110 nucleoside tr 99.3 3.6E-11 7.8E-16 128.4 13.1 179 30-232 210-403 (418)
135 PRK09705 cynX putative cyanate 99.3 1E-10 2.2E-15 123.9 16.4 176 28-231 205-381 (393)
136 PRK03545 putative arabinose tr 99.3 1.1E-10 2.5E-15 123.3 16.7 174 30-231 207-380 (390)
137 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.3E-16 109.9 7.2 133 70-229 4-136 (141)
138 PRK11273 glpT sn-glycerol-3-ph 99.2 5.9E-11 1.3E-15 128.1 13.6 177 28-229 253-433 (452)
139 PRK10489 enterobactin exporter 99.2 3.9E-11 8.4E-16 128.1 11.8 162 44-232 239-400 (417)
140 TIGR00893 2A0114 d-galactonate 99.2 9.7E-11 2.1E-15 122.7 14.3 177 28-228 215-396 (399)
141 PRK12382 putative transporter; 99.2 6.9E-11 1.5E-15 125.0 12.9 163 37-229 225-387 (392)
142 PRK11551 putative 3-hydroxyphe 99.2 1.7E-10 3.7E-15 122.5 15.8 170 31-228 223-393 (406)
143 KOG3626 Organic anion transpor 99.2 5.2E-10 1.1E-14 122.5 19.6 203 26-235 94-347 (735)
144 TIGR00897 2A0118 polyol permea 99.2 2.8E-10 6.1E-15 120.9 16.2 177 28-229 222-399 (402)
145 PRK15075 citrate-proton sympor 99.2 1.8E-10 3.9E-15 123.7 14.7 153 34-210 244-398 (434)
146 KOG2563 Permease of the major 99.2 3.7E-09 8.1E-14 108.7 23.0 132 52-205 68-201 (480)
147 TIGR00891 2A0112 putative sial 99.2 1.2E-10 2.7E-15 123.0 12.8 160 30-215 240-400 (405)
148 PLN00028 nitrate transmembrane 99.2 3.5E-10 7.5E-15 122.9 16.2 174 29-231 253-433 (476)
149 TIGR00892 2A0113 monocarboxyla 99.2 9.7E-11 2.1E-15 126.5 11.6 172 28-226 241-416 (455)
150 COG2223 NarK Nitrate/nitrite t 99.2 1.9E-10 4.1E-15 117.4 12.9 185 27-232 217-402 (417)
151 COG2814 AraJ Arabinose efflux 99.2 4.2E-10 9E-15 116.1 15.4 179 26-232 209-387 (394)
152 PRK03633 putative MFS family t 99.2 3.8E-10 8.2E-15 119.0 14.7 158 41-229 213-370 (381)
153 PF11700 ATG22: Vacuole efflux 99.1 5.2E-10 1.1E-14 120.5 15.1 184 26-230 279-467 (477)
154 PRK11663 regulatory protein Uh 99.1 4.7E-10 1E-14 120.4 14.5 178 28-229 243-422 (434)
155 TIGR00712 glpT glycerol-3-phos 99.1 7.8E-10 1.7E-14 118.9 15.4 178 28-229 251-431 (438)
156 TIGR00879 SP MFS transporter, 99.1 5.5E-10 1.2E-14 120.3 13.5 179 34-230 290-469 (481)
157 PRK10406 alpha-ketoglutarate t 99.1 9.5E-10 2.1E-14 118.0 15.1 176 30-229 244-422 (432)
158 PF03137 OATP: Organic Anion T 99.1 1E-11 2.2E-16 135.5 -0.6 198 32-236 6-255 (539)
159 PRK11010 ampG muropeptide tran 99.1 1.5E-09 3.3E-14 118.3 16.0 179 30-231 224-403 (491)
160 PRK11128 putative 3-phenylprop 99.1 1.4E-09 3.1E-14 114.6 14.7 166 28-223 205-371 (382)
161 TIGR01272 gluP glucose/galacto 99.1 2.1E-09 4.5E-14 110.0 14.2 162 28-219 140-303 (310)
162 PRK15402 multidrug efflux syst 99.1 2.6E-09 5.6E-14 113.6 15.5 173 28-223 215-387 (406)
163 TIGR00882 2A0105 oligosacchari 99.1 2.4E-09 5.2E-14 113.4 14.9 172 28-226 215-390 (396)
164 PF03092 BT1: BT1 family; Int 99.1 1.5E-08 3.2E-13 108.5 21.0 161 51-232 12-176 (433)
165 KOG2816 Predicted transporter 99.1 1.3E-08 2.8E-13 108.6 20.3 361 33-513 26-394 (463)
166 TIGR00881 2A0104 phosphoglycer 99.0 6.3E-10 1.4E-14 116.2 9.6 162 28-213 216-379 (379)
167 COG2270 Permeases of the major 99.0 7.1E-09 1.5E-13 106.1 16.5 129 47-199 34-170 (438)
168 PRK10504 putative transporter; 99.0 2.8E-09 6.1E-14 115.6 14.7 158 28-209 261-418 (471)
169 PRK10091 MFS transport protein 99.0 4.2E-09 9.1E-14 111.1 15.0 172 30-228 201-373 (382)
170 TIGR00900 2A0121 H+ Antiporter 99.0 1.5E-09 3.2E-14 112.8 11.4 155 28-208 210-365 (365)
171 KOG4686 Predicted sugar transp 99.0 3.1E-09 6.8E-14 102.3 12.1 171 17-216 253-427 (459)
172 PRK12307 putative sialic acid 99.0 4.9E-09 1.1E-13 112.0 15.3 148 41-214 244-391 (426)
173 TIGR00792 gph sugar (Glycoside 99.0 1E-09 2.2E-14 117.6 9.8 161 28-209 222-383 (437)
174 TIGR02332 HpaX 4-hydroxyphenyl 99.0 3.2E-09 6.9E-14 113.2 13.1 165 28-219 242-409 (412)
175 TIGR02718 sider_RhtX_FptX side 99.0 5.9E-09 1.3E-13 110.2 14.7 175 29-224 209-384 (390)
176 TIGR01272 gluP glucose/galacto 99.0 6.7E-09 1.4E-13 106.2 14.1 84 136-225 8-107 (310)
177 PRK14995 methyl viologen resis 99.0 3.2E-09 6.9E-14 116.0 12.1 154 28-205 259-412 (495)
178 PRK10133 L-fucose transporter; 99.0 1.1E-08 2.3E-13 110.0 15.4 165 31-225 261-427 (438)
179 PRK10054 putative transporter; 98.9 7.9E-09 1.7E-13 109.5 13.7 174 28-228 206-381 (395)
180 TIGR00711 efflux_EmrB drug res 98.9 3.2E-09 7E-14 115.4 10.9 156 28-206 255-410 (485)
181 TIGR00710 efflux_Bcr_CflA drug 98.9 1.8E-08 3.8E-13 105.8 16.0 164 28-214 206-369 (385)
182 PF05977 MFS_3: Transmembrane 98.9 1.4E-08 3E-13 110.7 15.0 172 30-228 220-391 (524)
183 TIGR00896 CynX cyanate transpo 98.9 8.2E-09 1.8E-13 107.6 12.8 153 28-208 197-350 (355)
184 TIGR00895 2A0115 benzoate tran 98.9 3.8E-09 8.2E-14 111.1 10.3 148 28-203 250-397 (398)
185 TIGR00894 2A0114euk Na(+)-depe 98.9 1.5E-08 3.3E-13 109.7 15.0 177 27-228 260-447 (465)
186 PRK10213 nepI ribonucleoside t 98.9 2.6E-08 5.6E-13 105.6 16.1 168 28-223 216-383 (394)
187 COG2270 Permeases of the major 98.9 1.9E-08 4.2E-13 103.0 13.8 172 28-226 252-424 (438)
188 PRK10077 xylE D-xylose transpo 98.9 2.2E-08 4.8E-13 108.7 14.6 161 46-230 289-456 (479)
189 PRK15034 nitrate/nitrite trans 98.9 3.9E-08 8.4E-13 104.9 15.3 187 28-231 252-454 (462)
190 PRK08633 2-acyl-glycerophospho 98.9 2.9E-08 6.3E-13 119.7 15.9 165 28-219 232-398 (1146)
191 PF13347 MFS_2: MFS/sugar tran 98.9 3.6E-08 7.8E-13 105.7 15.0 162 28-209 225-387 (428)
192 TIGR00887 2A0109 phosphate:H+ 98.8 1.6E-08 3.6E-13 110.6 12.2 168 35-226 295-484 (502)
193 PRK11902 ampG muropeptide tran 98.8 2.6E-08 5.6E-13 105.8 13.3 173 30-229 211-388 (402)
194 PRK11646 multidrug resistance 98.8 4.8E-08 1E-12 103.7 14.8 154 46-226 226-383 (400)
195 PRK06814 acylglycerophosphoeth 98.8 4.7E-08 1E-12 117.7 15.6 182 28-219 225-410 (1140)
196 PF05631 DUF791: Protein of un 98.8 2.6E-07 5.6E-12 93.5 18.2 153 57-232 62-217 (354)
197 PRK09848 glucuronide transport 98.8 2.9E-08 6.3E-13 107.0 12.2 163 28-209 228-391 (448)
198 PRK11195 lysophospholipid tran 98.8 1E-07 2.2E-12 101.0 15.5 162 39-228 216-377 (393)
199 TIGR00903 2A0129 major facilit 98.8 2E-07 4.3E-12 97.8 16.8 167 28-228 192-362 (368)
200 PRK10429 melibiose:sodium symp 98.8 2.9E-08 6.4E-13 107.8 10.8 165 28-209 231-396 (473)
201 TIGR00898 2A0119 cation transp 98.8 3.7E-08 8E-13 107.9 11.4 143 58-230 352-494 (505)
202 KOG2532 Permease of the major 98.7 3.1E-08 6.7E-13 106.2 9.4 177 28-229 258-445 (466)
203 COG2807 CynX Cyanate permease 98.7 3.5E-07 7.5E-12 92.0 15.2 170 28-224 208-378 (395)
204 PRK11043 putative transporter; 98.7 4E-07 8.6E-12 96.6 16.7 153 35-211 210-362 (401)
205 TIGR00901 2A0125 AmpG-related 98.7 8.4E-08 1.8E-12 100.0 11.1 145 29-190 210-355 (356)
206 PRK10473 multidrug efflux syst 98.7 4E-07 8.6E-12 96.3 15.6 146 40-217 215-360 (392)
207 KOG0253 Synaptic vesicle trans 98.7 3.2E-07 6.9E-12 91.9 13.5 172 27-227 325-515 (528)
208 PF07690 MFS_1: Major Facilita 98.7 3E-08 6.5E-13 102.5 6.2 144 30-197 208-352 (352)
209 KOG2504 Monocarboxylate transp 98.6 1.2E-07 2.5E-12 103.0 10.7 176 28-231 298-476 (509)
210 PRK11102 bicyclomycin/multidru 98.6 3.4E-07 7.4E-12 96.0 13.9 150 28-201 194-344 (377)
211 TIGR00886 2A0108 nitrite extru 98.6 2.1E-07 4.6E-12 97.0 10.5 142 28-193 225-366 (366)
212 KOG0569 Permease of the major 98.6 2.8E-07 6.2E-12 98.1 11.2 192 22-234 263-457 (485)
213 PF03825 Nuc_H_symport: Nucleo 98.6 8.7E-07 1.9E-11 93.7 14.6 176 28-229 207-393 (400)
214 PRK09669 putative symporter Ya 98.6 3.3E-07 7.1E-12 98.8 11.6 162 28-209 229-391 (444)
215 KOG3762 Predicted transporter 98.5 1.1E-06 2.3E-11 92.5 14.0 139 368-554 410-549 (618)
216 COG2211 MelB Na+/melibiose sym 98.5 1.2E-06 2.6E-11 92.6 13.9 162 28-208 236-398 (467)
217 TIGR00885 fucP L-fucose:H+ sym 98.5 1.6E-06 3.5E-11 92.4 13.7 163 29-221 233-402 (410)
218 PF01306 LacY_symp: LacY proto 98.4 1.2E-06 2.6E-11 91.5 11.4 177 27-230 219-399 (412)
219 PRK11652 emrD multidrug resist 98.4 4.8E-06 1E-10 88.1 15.5 147 39-210 218-364 (394)
220 PF06813 Nodulin-like: Nodulin 98.4 1.2E-05 2.6E-10 78.7 15.4 132 52-205 25-156 (250)
221 KOG1330 Sugar transporter/spin 98.3 8.3E-08 1.8E-12 99.2 -0.8 143 366-555 70-212 (493)
222 PF03209 PUCC: PUCC protein; 98.3 8.1E-06 1.8E-10 84.1 12.9 173 33-228 213-395 (403)
223 TIGR00880 2_A_01_02 Multidrug 98.3 7.2E-06 1.6E-10 72.1 10.9 133 371-551 5-137 (141)
224 TIGR00924 yjdL_sub1_fam amino 98.3 4.3E-06 9.2E-11 90.9 11.0 186 30-232 274-469 (475)
225 PRK11462 putative transporter; 98.3 8.1E-06 1.8E-10 88.3 12.7 160 30-209 230-390 (460)
226 KOG3098 Uncharacterized conser 98.2 0.00014 3E-09 77.1 21.1 99 70-196 56-154 (461)
227 KOG0637 Sucrose transporter an 98.2 8.7E-06 1.9E-10 84.3 11.7 166 28-203 32-202 (498)
228 PRK15403 multidrug efflux syst 98.2 3E-05 6.4E-10 82.8 15.0 171 28-222 218-388 (413)
229 KOG3764 Vesicular amine transp 98.2 2.2E-06 4.8E-11 87.1 5.3 177 29-226 271-449 (464)
230 COG0738 FucP Fucose permease [ 98.1 6.2E-05 1.3E-09 77.2 15.5 157 28-214 236-392 (422)
231 COG0477 ProP Permeases of the 98.1 2.5E-05 5.3E-10 77.8 12.7 152 42-219 16-173 (338)
232 PF12832 MFS_1_like: MFS_1 lik 98.1 2.9E-05 6.3E-10 61.4 8.8 70 33-104 5-74 (77)
233 KOG4332 Predicted sugar transp 98.1 2.9E-05 6.2E-10 74.8 10.3 89 54-164 62-150 (454)
234 PF01770 Folate_carrier: Reduc 98.0 0.0002 4.3E-09 74.8 17.3 173 28-230 5-181 (412)
235 TIGR01301 GPH_sucrose GPH fami 98.0 6.1E-05 1.3E-09 81.1 13.9 207 22-233 252-473 (477)
236 KOG3762 Predicted transporter 98.0 7.1E-06 1.5E-10 86.4 6.1 173 32-232 375-548 (618)
237 PF02487 CLN3: CLN3 protein; 98.0 0.0033 7.3E-08 65.7 24.7 61 448-508 334-394 (402)
238 PRK10207 dipeptide/tripeptide 98.0 1.6E-05 3.5E-10 86.6 8.0 178 37-232 278-477 (489)
239 PF00083 Sugar_tr: Sugar (and 97.9 1.1E-07 2.3E-12 102.6 -9.8 182 28-230 252-435 (451)
240 PRK09584 tppB putative tripept 97.9 6.1E-05 1.3E-09 82.4 11.2 178 37-232 281-480 (500)
241 KOG2533 Permease of the major 97.7 0.00011 2.3E-09 79.4 9.4 163 28-216 273-441 (495)
242 TIGR00788 fbt folate/biopterin 97.7 2.5E-05 5.3E-10 84.8 4.3 136 56-208 280-415 (468)
243 TIGR00805 oat sodium-independe 97.7 0.0002 4.4E-09 80.4 10.7 136 365-511 69-234 (633)
244 PF06609 TRI12: Fungal trichot 97.6 0.00074 1.6E-08 74.2 13.9 152 24-200 306-461 (599)
245 PF06963 FPN1: Ferroportin1 (F 97.5 0.021 4.6E-07 60.7 22.9 193 28-230 2-199 (432)
246 KOG0254 Predicted transporter 97.5 0.00064 1.4E-08 74.7 12.0 187 24-225 290-476 (513)
247 PRK15462 dipeptide/tripeptide 97.5 0.00031 6.7E-09 76.1 8.6 131 372-549 53-186 (493)
248 TIGR00769 AAA ADP/ATP carrier 97.2 0.047 1E-06 58.8 21.3 168 25-204 4-189 (472)
249 KOG2325 Predicted transporter/ 97.2 0.004 8.7E-08 66.4 12.9 157 367-555 74-232 (488)
250 KOG0252 Inorganic phosphate tr 97.2 0.00039 8.4E-09 72.4 5.0 179 28-230 304-497 (538)
251 TIGR00806 rfc RFC reduced fola 97.1 0.0052 1.1E-07 65.4 11.8 108 368-508 66-173 (511)
252 PTZ00207 hypothetical protein; 96.9 0.0046 9.9E-08 68.3 10.6 126 383-552 80-205 (591)
253 KOG2563 Permease of the major 96.9 0.015 3.3E-07 60.8 13.2 185 28-236 266-455 (480)
254 PF06779 DUF1228: Protein of u 96.9 0.011 2.4E-07 47.3 9.2 73 42-116 6-78 (85)
255 PF05978 UNC-93: Ion channel r 96.8 0.013 2.7E-07 53.2 10.7 103 69-199 42-144 (156)
256 KOG0255 Synaptic vesicle trans 96.8 0.0064 1.4E-07 66.9 10.5 129 368-547 122-250 (521)
257 KOG3574 Acetyl-CoA transporter 96.5 0.23 4.9E-06 51.1 17.8 159 23-200 26-189 (510)
258 KOG2615 Permease of the major 96.5 0.012 2.6E-07 60.1 8.8 135 45-205 277-413 (451)
259 PRK03612 spermidine synthase; 96.4 0.099 2.1E-06 57.4 16.2 169 35-226 21-193 (521)
260 PF03137 OATP: Organic Anion T 96.4 0.00055 1.2E-08 75.2 -1.6 149 352-512 27-204 (539)
261 KOG2816 Predicted transporter 96.3 0.011 2.3E-07 63.7 7.5 128 50-205 263-391 (463)
262 TIGR00926 2A1704 Peptide:H+ sy 96.3 0.017 3.7E-07 64.9 9.4 65 443-507 559-623 (654)
263 KOG3626 Organic anion transpor 96.1 0.029 6.2E-07 62.7 10.1 106 449-555 237-346 (735)
264 COG3104 PTR2 Dipeptide/tripept 95.7 0.007 1.5E-07 64.2 2.8 117 406-557 93-211 (498)
265 PF00854 PTR2: POT family; In 94.9 0.077 1.7E-06 55.6 7.9 124 406-557 2-128 (372)
266 PF06813 Nodulin-like: Nodulin 94.8 0.081 1.7E-06 52.0 7.0 91 404-509 65-155 (250)
267 PF06963 FPN1: Ferroportin1 (F 94.4 0.35 7.5E-06 51.6 11.3 137 47-201 277-413 (432)
268 KOG3880 Predicted small molecu 93.7 2.1 4.5E-05 43.0 14.1 49 457-505 350-398 (409)
269 PF07672 MFS_Mycoplasma: Mycop 93.4 4.2 9.1E-05 39.9 15.5 56 177-232 3-63 (267)
270 KOG3098 Uncharacterized conser 93.2 0.65 1.4E-05 49.7 10.6 143 47-201 259-409 (461)
271 PF13000 Acatn: Acetyl-coenzym 93.0 16 0.00034 39.5 20.7 60 451-510 407-466 (544)
272 TIGR00939 2a57 Equilibrative N 92.9 15 0.00034 39.3 28.3 60 448-507 371-430 (437)
273 KOG0637 Sucrose transporter an 92.7 0.53 1.1E-05 49.7 8.7 182 22-208 273-472 (498)
274 PF02487 CLN3: CLN3 protein; 91.3 0.59 1.3E-05 49.1 7.4 63 136-204 333-395 (402)
275 KOG3097 Predicted membrane pro 90.7 2 4.3E-05 43.5 9.9 120 22-170 23-142 (390)
276 PF05978 UNC-93: Ion channel r 90.1 1.5 3.4E-05 39.7 8.0 61 448-508 88-148 (156)
277 KOG3810 Micronutrient transpor 89.3 0.38 8.2E-06 48.9 3.7 149 49-227 25-179 (433)
278 KOG1479 Nucleoside transporter 89.3 32 0.00069 36.2 25.3 58 448-505 342-399 (406)
279 PF03092 BT1: BT1 family; Int 88.9 2.8 6.1E-05 45.0 10.4 113 408-554 62-177 (433)
280 KOG4332 Predicted sugar transp 88.3 1.6 3.4E-05 42.9 7.0 176 28-226 249-426 (454)
281 COG3202 ATP/ADP translocase [E 87.6 45 0.00097 36.0 19.1 168 24-205 23-209 (509)
282 TIGR00769 AAA ADP/ATP carrier 85.3 22 0.00047 38.6 14.6 57 454-510 133-190 (472)
283 PF05631 DUF791: Protein of un 82.7 30 0.00064 35.8 13.5 92 367-491 72-168 (354)
284 TIGR00939 2a57 Equilibrative N 82.7 1.9 4.2E-05 46.2 5.3 155 28-199 269-427 (437)
285 PF01770 Folate_carrier: Reduc 79.6 28 0.00061 36.8 12.4 131 37-192 256-388 (412)
286 PF03219 TLC: TLC ATP/ADP tran 75.1 1.2E+02 0.0027 33.0 16.2 42 469-510 164-205 (491)
287 PF07857 DUF1632: CEO family ( 70.1 31 0.00067 33.9 9.2 29 480-508 74-102 (254)
288 KOG3810 Micronutrient transpor 69.2 71 0.0015 33.1 11.6 102 67-193 274-375 (433)
289 COG5336 Uncharacterized protei 67.1 16 0.00035 30.3 5.4 41 74-114 52-92 (116)
290 PF03219 TLC: TLC ATP/ADP tran 66.4 90 0.002 34.0 12.8 67 145-216 289-355 (491)
291 COG0477 ProP Permeases of the 63.1 31 0.00066 33.3 8.1 61 449-509 94-156 (338)
292 KOG1479 Nucleoside transporter 63.0 79 0.0017 33.4 11.0 84 449-549 117-201 (406)
293 PF13000 Acatn: Acetyl-coenzym 61.1 66 0.0014 34.9 10.1 33 476-508 145-177 (544)
294 PF01733 Nucleoside_tran: Nucl 59.1 2.7 5.9E-05 42.8 -0.4 161 25-199 140-303 (309)
295 COG3202 ATP/ADP translocase [E 53.6 3.3E+02 0.0071 29.6 13.8 75 148-227 294-369 (509)
296 PF09527 ATPase_gene1: Putativ 52.2 67 0.0015 23.1 6.1 38 71-108 7-44 (55)
297 KOG4830 Predicted sugar transp 46.5 27 0.00059 34.4 4.1 62 35-98 24-94 (412)
298 COG5336 Uncharacterized protei 45.9 65 0.0014 26.9 5.6 33 478-510 35-67 (116)
299 KOG1237 H+/oligopeptide sympor 39.4 95 0.0021 34.6 7.6 92 449-556 152-249 (571)
300 KOG3574 Acetyl-CoA transporter 39.1 1.3E+02 0.0028 31.7 7.8 40 465-504 149-188 (510)
301 TIGR02230 ATPase_gene1 F0F1-AT 36.9 1.2E+02 0.0025 25.2 5.9 32 76-107 54-85 (100)
302 PF11947 DUF3464: Protein of u 32.5 1.3E+02 0.0029 27.0 6.0 90 86-195 56-145 (153)
303 PF06645 SPC12: Microsomal sig 31.2 54 0.0012 25.7 3.0 48 185-235 13-60 (76)
304 PF06912 DUF1275: Protein of u 30.9 4.5E+02 0.0098 24.6 11.4 33 186-219 168-200 (209)
305 KOG4112 Signal peptidase subun 28.6 54 0.0012 26.5 2.5 50 184-236 27-76 (101)
306 PRK11469 hypothetical protein; 26.7 4.4E+02 0.0095 24.6 8.8 53 59-112 129-182 (188)
307 COG2119 Predicted membrane pro 24.9 5E+02 0.011 24.2 8.3 36 73-109 143-178 (190)
308 PF07099 DUF1361: Protein of u 24.4 5E+02 0.011 23.7 8.5 39 49-87 40-84 (168)
309 PF02694 UPF0060: Uncharacteri 22.6 4.7E+02 0.01 22.0 8.4 49 63-112 53-101 (107)
310 PRK02237 hypothetical protein; 20.8 2.4E+02 0.0053 23.7 5.0 48 64-112 56-103 (109)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=390.68 Aligned_cols=536 Identities=45% Similarity=0.789 Sum_probs=474.4
Q ss_pred ccccCCCCccc---cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHh
Q 007932 12 VDLQGRPVLSS---KTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIA 88 (584)
Q Consensus 12 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~la 88 (584)
.++..++.... ++..|+.+.+.+..+.+|+.++|++...+..|+++.+|.+...+.-.++.+.....+.++++++++
T Consensus 18 ~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~la 97 (571)
T KOG1237|consen 18 VDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLA 97 (571)
T ss_pred eeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444444444 778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCC-C----CCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccc
Q 007932 89 DTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPT-C----TNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFG 163 (584)
Q Consensus 89 D~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~ 163 (584)
|.|.||.+++.++.++..+|..++.+.+.++.+.++ | ....|+.++......++.++.+.++|.|+..|+..+..
T Consensus 98 D~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fG 177 (571)
T KOG1237|consen 98 DSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFG 177 (571)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhc
Confidence 999999999999999999999999999999988776 3 23378888888889999999999999999999999999
Q ss_pred cccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCC
Q 007932 164 ADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKS 243 (584)
Q Consensus 164 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (584)
+|++++..+.+++.+.+.++|+++..++|..++..+..+++++.+|.+.|.++.+..+++++++....+.|++.+|.+ +
T Consensus 178 adQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~g-s 256 (571)
T KOG1237|consen 178 ADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRG-S 256 (571)
T ss_pred ccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCC-C
Confidence 999997777777778899999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred hhhhhHHHHHHHHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCC------CCCCCCCcccccc
Q 007932 244 PARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGN------GGDSKPPCTVTQV 317 (584)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~ 317 (584)
|..+..+++..+.++++...+.+++.. +.+. .+.....+.+++++++++++..+. ...+|+.|+.+++
T Consensus 257 p~t~i~~Vlvaa~~k~~~~~~~~~~~~-~~~~-----~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~V 330 (571)
T KOG1237|consen 257 PKTRIGQVLVAAAFKRKAVVSLDPEEL-YYDC-----TDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQV 330 (571)
T ss_pred chhHHHHHHHHHHHHHhccCCCcchhc-cccc-----cccccccCCcccchhhHhhccCCcccccccccCCccCCCceeh
Confidence 999999999999999887766654333 1111 111222335678889988888653 2367999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccC
Q 007932 318 EGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTG 397 (584)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~ 397 (584)
|+.|.+++...++...+.+++.+.|+.+++..|...++++.++++.+|++.++.+..+..++..|+.++...|+.||..+
T Consensus 331 ee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~ 410 (571)
T KOG1237|consen 331 EEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTG 410 (571)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcC
Confidence 99999999999999999999999999999999999999999855999999999999999999999999999999999988
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeecc
Q 007932 398 NPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQ 477 (584)
Q Consensus 398 ~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~ 477 (584)
++.+++.++++.+|+++..+++.+.+.++..+.+.+.. ..++.++++++|++++|++.|++|.+..++..++.+++
T Consensus 411 ~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~q 486 (571)
T KOG1237|consen 411 NPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQ 486 (571)
T ss_pred CCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhh----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhh
Confidence 88788999999999999999999999999888776644 12234689999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccC-CCCCccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 478 SPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIG-DNLNDCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 478 ~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
+|++||+.+++++.+...+|+.++..+...+....+. ..+|+. +++|.++.+++||+++....++.+.+.++.++++
T Consensus 487 aP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~ 564 (571)
T KOG1237|consen 487 APESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYD 564 (571)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeee
Confidence 9999999999999999999999999999998876644 458999 8999999999999999999999888777777666
Q ss_pred cccc
Q 007932 557 YKRE 560 (584)
Q Consensus 557 ~~~~ 560 (584)
+++.
T Consensus 565 ~~~~ 568 (571)
T KOG1237|consen 565 YKDD 568 (571)
T ss_pred eccc
Confidence 5543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=310.93 Aligned_cols=464 Identities=19% Similarity=0.307 Sum_probs=349.2
Q ss_pred CCccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC----CchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc
Q 007932 18 PVLSSKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLH----EDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG 93 (584)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G 93 (584)
+......+++|.++.++.++++|+++||++...+..|+..+++ +|.+++..+.+.|..-.++.++++||++||++|
T Consensus 11 ~~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG 90 (498)
T COG3104 11 TLEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLG 90 (498)
T ss_pred ccccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344455689999999999999999999999999999998888 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChh
Q 007932 94 RFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPY 173 (584)
Q Consensus 94 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~ 173 (584)
+||++..|.+++++|.++++... ......++++..+.++|.|..+|+++++++|++|++++
T Consensus 91 ~~~tI~lGail~~iGh~~L~~~~------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp- 151 (498)
T COG3104 91 TRRTIVLGAILMAIGHLVLAISS------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP- 151 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHhccc------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc-
Confidence 99999999999999999999762 02355699999999999999999999999999999887
Q ss_pred hhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCC-CChhh--h---
Q 007932 174 ERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKT-KSPAR--D--- 247 (584)
Q Consensus 174 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~--- 247 (584)
||-..++++|++.|+|+.++|++.+++.++.||+..|.+.++...++++.++.+++......... +.+.. .
T Consensus 152 ---rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~ 228 (498)
T COG3104 152 ---RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLP 228 (498)
T ss_pred ---ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhh
Confidence 79999999999999999999999999999999999999999999999988888776554332111 01111 0
Q ss_pred -hHHHHHHHHhhccccCCCCCCCccccccccccccccccccCCCcch-hhhHHHHhcCCCCCCCC--CcccccchhhHHH
Q 007932 248 -LIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFR-CLDKAAIKHGNGGDSKP--PCTVTQVEGTKLV 323 (584)
Q Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 323 (584)
...........- +...... +..+ .+....+....+ ...+ ...... +++||.
T Consensus 229 ~~~~~~~~~~~~~----------~~~~l~~-------------~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~-~er~r~ 283 (498)
T COG3104 229 VLGGLVVMILAAL----------LTLLLNQ-------------NTFSGVLLVISILIAII-YFAEAFRSPKVF-DERRRL 283 (498)
T ss_pred hHHHHHHHHHHHH----------HHHHHHH-------------HHHHHHHHHHHHHHHHH-HHHHHhccCccH-HHHHHH
Confidence 000100000000 0000000 0000 000000000000 0000 001122 678899
Q ss_pred HHHHHHHHHhhhhhhhhccccceEEEecc-cccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCC
Q 007932 324 LGMALIWLVTLIPSTIWAQINTLFVKQGT-TLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGI 402 (584)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~ 402 (584)
+..+.+++..++||+++.|+.+.+..+.. ..++... ++.+++++++++|++..++.+|+.++++.++.++. +.+
T Consensus 284 ~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~----~~p 358 (498)
T COG3104 284 LAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN----KQP 358 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC----CCC
Confidence 99999999999999999999976655553 3444433 48899999999999999999999999999987764 234
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchh
Q 007932 403 TMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDM 482 (584)
Q Consensus 403 ~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 482 (584)
+...++.+|+.+++.+++++.......-+. ....+.+|+++.|++.++||.+..|...+++.+.+|+.+
T Consensus 359 s~~~KFalGl~l~g~~fl~l~~~~~~~~~~-----------~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~ 427 (498)
T COG3104 359 STPIKFALGLILAGLGFLILLLAGIWFGGP-----------SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL 427 (498)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhcCC-----------CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH
Confidence 788889999999999998887763221110 123788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 007932 483 QSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSR 554 (584)
Q Consensus 483 rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~ 554 (584)
.+..++++.+....|+.++..+.+.... ..+..+......+|+.++...++..+.+....+.
T Consensus 428 ~s~~ma~wfLt~a~~~~l~g~va~~~~~----------~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~ 489 (498)
T COG3104 428 KSFIMAMWFLTVAAGQTLGGQVAGLTAV----------TDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPK 489 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhceecccccc----------cchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 9999999999999888888777653110 0001112233456888888887776665555443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.7e-35 Score=317.59 Aligned_cols=458 Identities=14% Similarity=0.216 Sum_probs=325.1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc-ccchhHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADT-YIGRFWTFTLSS 102 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~-~~Grk~~~~~~~ 102 (584)
+++||.++.+++.+++|++++|++.++++.|+++++|++..+++++.+.+....++.++++|+++|| + ||||+++++.
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~-G~r~~~~~g~ 88 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLL-GTKRTIVLGA 88 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhcc-chHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999 6 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
+++.++++++.++.+ ....++++|.++|+|.|...|+..++++|++|++++ +|.+++
T Consensus 89 ~~~~~g~~~~~~~~~-------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~~ 145 (489)
T PRK10207 89 IVLAIGYFMTGMSLL-------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGAF 145 (489)
T ss_pred HHHHHHHHHHHHhcc-------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcch
Confidence 999999999988631 123466899999999999999999999999998753 468899
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecC--CCCCChhhhhHHHHH-------
Q 007932 183 NWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKI--RKTKSPARDLIRVPI------- 253 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------- 253 (584)
++++++.|+|..+||.+++++.++.||++.|++.++..+++++.+...++.+++.. |++ .+. +..+...
T Consensus 146 ~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-d~~~~~l~~~~~~~ 223 (489)
T PRK10207 146 TLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDH-KPM-SFSKLLLVLLGSVV 223 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCc-cch-hhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999987766666655555554443321 211 111 1111100
Q ss_pred HHHh-hccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 007932 254 AAFR-NRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLV 332 (584)
Q Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (584)
.... ....... +... ..+......... .+.++....+ ...+++.+....++..
T Consensus 224 ~~~~~~~~~~~~-~~~~-----------------------~~~~~~~~i~~~-~f~~~~~~~~-~~~r~r~~~~~~l~~~ 277 (489)
T PRK10207 224 MIFVCAWLMHNV-EVAN-----------------------LVLIVLSIVVTI-IFFREAFKLD-KTGRNKMFVAFVLMLE 277 (489)
T ss_pred HHHHHHHHHhhh-hHHH-----------------------HHHHHHHHHHHH-HHHHHHhcCC-HHHHHHHHHHHHHHHH
Confidence 0000 0000000 0000 000000000000 0000000011 1234556666666777
Q ss_pred hhhhhhhhccccceEEEecc-cccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHH
Q 007932 333 TLIPSTIWAQINTLFVKQGT-TLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVG 411 (584)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig 411 (584)
...+|..+.|....+..+.. ..++... ++..+++++++++++..++.+|+.+++.+++.+| ...+++..++.+|
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r----~~~~~~~~k~~~G 352 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGIYTHLGSK----GKDLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC----CCCCCcHHHHHHH
Confidence 88888888888654333332 3344443 5777888999999999999999988877666555 3345788899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH
Q 007932 412 FVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT 491 (584)
Q Consensus 412 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~ 491 (584)
+++.+++++.+........+ . ....+.+|+++.+++.++||.+..|+.++++.+.+|++++|.++|+++
T Consensus 353 ~~l~~~~~~~~~~~~~~~~~---~--------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWFAD---A--------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHHHHHHhhcC---C--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 99999888765433211000 0 112567889999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCC-CccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 492 SGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNL-NDCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 492 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~-~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
+..++|+.++..+......... ..|+. ..+++.++|..++++++++.++++...+..+
T Consensus 422 l~~~ig~~lg~~l~~~~~~~~~-------~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~ 480 (489)
T PRK10207 422 LTQAAAFLLGGYVATFTAVPDN-------ITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLN 480 (489)
T ss_pred HHHHHHHHHHHHHHHHhccccc-------cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888765531000 00111 1234567788888888888777766655443
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=1.4e-33 Score=301.20 Aligned_cols=462 Identities=17% Similarity=0.241 Sum_probs=323.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
+++|.++.+++.++++++++|++..+++.|+++++|+++.+++.+.+.+.....++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+++.+++.... .+...++++..+..+|.|...++.+++++|++|++++ +|.+++++
T Consensus 86 ~~lg~lll~~~~-------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~i 142 (493)
T PRK15462 86 MAIGHVVLGASE-------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFSL 142 (493)
T ss_pred HHHHHHHHHHhh-------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceehH
Confidence 999987665431 1122345555666788888889999999999998643 69999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhh--hhHHHH-----HHH--
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPAR--DLIRVP-----IAA-- 255 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~-- 255 (584)
+++..|+|+.++|.+++++.+.+||++.|.+.++..+++.+.++...+.+.+....++.+.. +..... ...
T Consensus 143 ~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (493)
T PRK15462 143 MYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVA 222 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998777766666655555443332111101110 000000 000
Q ss_pred ---HhhccccCCCCCCCccccccccccccccccccCCCcchh-hhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHH
Q 007932 256 ---FRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRC-LDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWL 331 (584)
Q Consensus 256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (584)
+...... .+.... +......... -..+-.......+++||+.....++.
T Consensus 223 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~er~r~~~~~~l~~ 275 (493)
T PRK15462 223 TPALITVLFW--------------------------KEWSVYALIVATIIGLG-VLAKIYRKAENQKQRKELGLIVTLTF 275 (493)
T ss_pred HHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHhhHHHHHHHHH
Confidence 0000000 000000 0000000000 00000000012356788888999999
Q ss_pred Hhhhhhhhhccccce-EEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHH
Q 007932 332 VTLIPSTIWAQINTL-FVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGV 410 (584)
Q Consensus 332 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~i 410 (584)
..+.||..++|.++. .++...+.|+.+. ++.+|+.+++++|++..++.+|+..++..++.+|. +.++...++.+
T Consensus 276 ~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~----~~~s~~~Kfa~ 350 (493)
T PRK15462 276 FSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN----RTVRIWGKFAL 350 (493)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHH
Confidence 999999999999853 3333456777776 78899999999999999999999988876664432 23478889999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHH
Q 007932 411 GFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFF 490 (584)
Q Consensus 411 g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~ 490 (584)
|+++++++++++....... .. ....+.+|++..+++.++||.+..|...+++.+.+|++.||..+|++
T Consensus 351 g~~~~g~~f~~l~~~~~~~----~~--------~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w 418 (493)
T PRK15462 351 GLGLMSAGFCILTLSARWS----AM--------YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIY 418 (493)
T ss_pred HHHHHHHHHHHHHHHHhhc----CC--------CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHH
Confidence 9999999998887653211 00 11267889999999999999999999999999999999999999999
Q ss_pred HHHH-hHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHH-HHH-HHhhhhcccc
Q 007932 491 TSGI-GVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILN-LGA-FFWASSRYVY 557 (584)
Q Consensus 491 ~~~~-~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~-~l~-~~~~~~~~~~ 557 (584)
.+.. .+|+.++..+....... +..+-........++..+|..++.+++++ .++ +.+.++..|.
T Consensus 419 ~l~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (493)
T PRK15462 419 MLLSGAIANYLAGVIADQTSQA----SFDASGAINYSINAYIEVFDQITWGALACVGVVLMIWLYQALKF 484 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhccc----cCCccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8744 67777776666544211 00000000001224556787777777666 443 4444444433
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.3e-33 Score=303.31 Aligned_cols=451 Identities=16% Similarity=0.216 Sum_probs=323.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc-ccchhHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQ--LHEDTVSSVRNVNNWSGVVWITPLLGAYIADT-YIGRFWTFTL 100 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~-~~Grk~~~~~ 100 (584)
.+++|.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++|| + ||||++.+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~-G~~~~l~~ 84 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVW-GTKKTMVL 84 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhc-chHHHHHH
Confidence 46778899999999999999999999999999987 99999999999999999999999999999999 6 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccce
Q 007932 101 SSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVS 180 (584)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (584)
+.++.+++.++++++ .+.+.++++|.+.|+|.|...|+.+++++|++|+++.+ +|++
T Consensus 85 ~~~~~~~g~~~~~~~--------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~ 141 (475)
T TIGR00924 85 GGIVLMLGHFMLAMS--------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDG 141 (475)
T ss_pred HHHHHHHHHHHHHhc--------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccc
Confidence 999999999888875 33566888999999999999999999999999876421 5889
Q ss_pred eeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhh----HHH-----
Q 007932 181 FFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDL----IRV----- 251 (584)
Q Consensus 181 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----- 251 (584)
++++++++.|+|..+||.+++++.+++||++.|.+.++..+++.+.+...++.+++.++++ ++.... .+.
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 220 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALL 220 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-CCcchhhhhhHHHHHHHH
Confidence 9999999999999999999999999899999999988766666655555554443222111 111000 000
Q ss_pred --HHHHHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH
Q 007932 252 --PIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI 329 (584)
Q Consensus 252 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (584)
........... ..... . +..... ... ...-...... . ++ ..++ .++++......+
T Consensus 221 ~~~~~~~~~~~~~-~~~~~--~--~~~~~~-~~~------~~~~~~~~~~-~-----~~----~~~~-~~~~~~~~~l~l 277 (475)
T TIGR00924 221 AALALVFFCAWLM-HHVVI--A--NILLMT-VTL------AVIIFFFRLA-F-----KP----RLDA-VARNKMYAYIVL 277 (475)
T ss_pred HHHHHHHHHHHHH-hccHH--H--HHHHHH-HHH------HHHHHHHHHH-H-----hc----cCCH-HHHhHHHHHHHH
Confidence 00000000000 00000 0 000000 000 0000000000 0 00 0111 223444456677
Q ss_pred HHHhhhhhhhhccccceE-EEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHH
Q 007932 330 WLVTLIPSTIWAQINTLF-VKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRL 408 (584)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i 408 (584)
+.....+|+.+.|..+.+ +++...++...+ ++.+++++++++|++..++..|+.+++..++.|| ...++...++
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~----~~~~~~~~k~ 352 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK----GKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC----CCCCCcHHHH
Confidence 788888999999988643 333344555555 6788999999999999999999988765555554 2233666788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHH
Q 007932 409 GVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTT 488 (584)
Q Consensus 409 ~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g 488 (584)
.+|+++.+++++.++...... + +..+.+++|+++.+++.++||.+..|..++++++.+|++.||+++|
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~-----~-------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g 420 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFA-----D-------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLG 420 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-----C-------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999998887652110 0 0124688999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 007932 489 FFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 489 i~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
++.+...+|+.+++.+...... ..++..+|...++++++..+++++..+..
T Consensus 421 ~~~l~~~~g~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 421 MWFLAQAMGSLLGGYLATFGAV----------------PQGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----------------ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888765531 11234457777777777666666555543
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.5e-32 Score=298.82 Aligned_cols=454 Identities=14% Similarity=0.226 Sum_probs=320.1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc-ccchhHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADT-YIGRFWTFTLSS 102 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~-~~Grk~~~~~~~ 102 (584)
.+++|.++.+++.++++++++|++.++++.|+++++|++..+++++.+.+.......++++|+++|| + |||++++++.
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~-G~r~~~~~g~ 95 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVL-GTKRVIMLGA 95 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999888887878888899999999 6 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
++.+++..+++++. .+.+.+.++|+++|+|.|...++..++++|++|++++ +|.+++
T Consensus 96 ~~~~ig~~l~~~~~-------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~ 152 (500)
T PRK09584 96 IVLAIGYALVAWSG-------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAF 152 (500)
T ss_pred HHHHHHHHHHHHhc-------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcc
Confidence 99999988888752 2345677889999999999999999999999987642 466789
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeec--CCCCCChhhhhHHHH-------H
Q 007932 183 NWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHK--IRKTKSPARDLIRVP-------I 253 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~ 253 (584)
++++++.|+|+.+||.+++++.+++||++.|++.++..+++.+.+....+.+++. +|+. .+... .+.. .
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 230 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDF-EPINY-RKLLLTIVGVVA 230 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCc-cccch-hhHHHHHHHHHH
Confidence 9999999999999999999999999999999998876666655444433333222 1211 11111 1100 0
Q ss_pred HHH-hhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 007932 254 AAF-RNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLV 332 (584)
Q Consensus 254 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (584)
... .......+. ... . ............ ....... .+..++++.+..+.+++.
T Consensus 231 ~~~~~~~~~~~~~----~~~------------~-----~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~ 284 (500)
T PRK09584 231 LIAIATWLLHNQE----IAR------------M-----ALGVVALGIVVI----FGKEAFA-MKGAARRKMIVAFILMLE 284 (500)
T ss_pred HHHHHHHHHhcch----HHH------------H-----HHHHHHHHHHHH----HHHHHhh-cCHHHHHHHHHHHHHHHH
Confidence 000 000000000 000 0 000000000000 0000001 112345566666777788
Q ss_pred hhhhhhhhccccceEEEecc-cccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHH
Q 007932 333 TLIPSTIWAQINTLFVKQGT-TLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVG 411 (584)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig 411 (584)
.+.+|+.+.|.+..+..+.. ..+..+. ++..++++++++|++..++..|+.++...++.+|. +..+++.+|
T Consensus 285 ~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-------~~~~~~~~G 356 (500)
T PRK09584 285 AIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-------PMPHKFAIG 356 (500)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-------CcHHHHHHH
Confidence 89999999999877655432 2344444 57788999999999999999999888765554442 567889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH
Q 007932 412 FVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT 491 (584)
Q Consensus 412 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~ 491 (584)
+++++++++++....... +. ....+.+|+++.+++.++||.+..|...+++.+.+|+++||.++|++.
T Consensus 357 ~~l~~l~f~~l~~~~~~~----~~--------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFA----ND--------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHHHHHHHHHHhc----CC--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999999887763210 00 123667799999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCC-ccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 492 SGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLN-DCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 492 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~-~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
+...+|+.++..+...+... .-..|... .+++..+|..+++++++.+++++...++.+
T Consensus 425 l~~a~g~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~ 483 (500)
T PRK09584 425 LTTAGAALIAGYVANLMAVP-------DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLN 483 (500)
T ss_pred HHHHHHHHHHHHHHHHhccc-------cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888887776543210 00111111 224667788888877776666665555443
No 7
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=5.1e-24 Score=225.87 Aligned_cols=374 Identities=11% Similarity=0.021 Sum_probs=244.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
.+|.+..++...+...++.....+.++.|+++++|.|+.+.+++.+.+.++..+++++.|+++||+ ||||+++++.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 346777788888999999888899999999999999999999999999999999999999999999 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+++.+.+..+..... ....+...+++.|+++|++.+...+...+++.|.+|++ +|+++++++
T Consensus 92 ~~~~~~~~~~~~~~~------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~ 153 (399)
T PRK05122 92 ALSGLLYLLAGLLAA------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVISWN 153 (399)
T ss_pred HHHHHHHHHhhhhhc------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccchhhh
Confidence 887766655421000 00124667899999999999999999999999999887 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCC
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPD 265 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (584)
....++|..+|+.+++++.+..||+..+++..+..++..+. ..+ .++.++++ .+.
T Consensus 154 ~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~-~~~-------------------- 208 (399)
T PRK05122 154 GIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---ARP-RPAVPPVK-GER-------------------- 208 (399)
T ss_pred hhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---Hhc-CCCCCCCC-ccc--------------------
Confidence 99999999999999999999899998887665543332221 111 00000000 000
Q ss_pred CCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHH-HHHHhhhhhhhhcccc
Q 007932 266 NPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMAL-IWLVTLIPSTIWAQIN 344 (584)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 344 (584)
.++.+ ..|+.+.... ..+....+.......+
T Consensus 209 --------------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T PRK05122 209 --------------------------LPFRR----------------------VLGRVWPYGMGLALASIGFGTIATFIT 240 (399)
T ss_pred --------------------------hhHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0011111110 1111111111111111
Q ss_pred ceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007932 345 TLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYA 424 (584)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~ 424 (584)
.++..+ . +. ..+.......++.+++.++.+++.+|..+| +.+..+..+.+++......
T Consensus 241 ~~~~~~------~----~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~~~~~~~~~~~~~~~ 298 (399)
T PRK05122 241 LYYAAR------G----WD-GAALALTLFGVAFVGARLLFGNLINRLGGL-----------RVAIVSLLVEILGLLLLWL 298 (399)
T ss_pred HHHHHc------c----cc-cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHH
Confidence 111110 0 10 111222233444455555555554443322 3355566666666554443
Q ss_pred HHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHH
Q 007932 425 VEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFL 504 (584)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l 504 (584)
. .+.+..+...++.|++.....+.....+.+.+|++.||++.|+++....+|..+++.+
T Consensus 299 ~---------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 357 (399)
T PRK05122 299 A---------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPL 357 (399)
T ss_pred h---------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 1333455566788888888888777777789999999999999999999999998888
Q ss_pred HHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHh
Q 007932 505 VTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFW 550 (584)
Q Consensus 505 ~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~ 550 (584)
.+.+.+. .++...|++.+++.+++.+..+.
T Consensus 358 ~g~l~~~----------------~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 358 AGLVASW----------------FGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHH----------------cCHHHHHHHHHHHHHHHHHHHHH
Confidence 8776531 13455677777766666554443
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=1.9e-24 Score=228.61 Aligned_cols=374 Identities=12% Similarity=0.047 Sum_probs=242.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
.+|..++.+.+..+......+...+.+| .+.+++|.++.+.+++.+.+.++..+++++.|+++||+ ||||++.++.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 3455566666666665555554434444 56789999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+.+.++ ++.+.++++|+++|++.+...+...+++.|.+|++ +|++++++
T Consensus 84 ~~~~~~~~~~~--------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~ 137 (390)
T PRK03545 84 FIASHVLSALA--------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSL 137 (390)
T ss_pred HHHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHH
Confidence 99999888886 45788999999999999988899999999999987 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCC
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLP 264 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (584)
...+.++|..++|.+++.+.+..|||+.|++.++..++..+..+...|+.+ ++++++.++
T Consensus 138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~----------------- 197 (390)
T PRK03545 138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP---SEHSGSLKS----------------- 197 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCcchHHH-----------------
Confidence 999999999999999999999899999999988765555444333222110 000000000
Q ss_pred CCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH-HHHHHHhhhhhhhhccc
Q 007932 265 DNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM-ALIWLVTLIPSTIWAQI 343 (584)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (584)
+.+ .-.++..+.. ...+......+......
T Consensus 198 -----------------------------~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (390)
T PRK03545 198 -----------------------------LPL--------------------LFRRPALVSLYLLTVVVVTAHFTAYSYI 228 (390)
T ss_pred -----------------------------HHH--------------------HHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0001111111 11111111122222222
Q ss_pred cceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007932 344 NTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAY 423 (584)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~ 423 (584)
+.+...+ .+.+ ....+.+.....++.+++..+.+++.+|..+| .+.++..+..++.....
T Consensus 229 ~~~l~~~-~g~s-------~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------------~~~~~~~~~~~~~~~l~ 288 (390)
T PRK03545 229 EPFVQQV-AGLS-------ENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------------FLLIAIALLLVCLLLLL 288 (390)
T ss_pred HHHHHHh-cCCC-------ccHHHHHHHHHHHHHHHHHHHHHHHhhccchh------------HHHHHHHHHHHHHHHHH
Confidence 2211110 0111 11122333334445555555555543332221 24444444444443322
Q ss_pred HHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHH
Q 007932 424 AVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSF 503 (584)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~ 503 (584)
.. ..+.+.++...++.|++.....+.....+.+..| +.|++++|+++....+|..+|+.
T Consensus 289 ~~--------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~ 347 (390)
T PRK03545 289 PA--------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGAL 347 (390)
T ss_pred HH--------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 21 0133445556667777777666766777777777 57899999999999999999999
Q ss_pred HHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhh
Q 007932 504 LVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWAS 552 (584)
Q Consensus 504 l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~ 552 (584)
+.+.+.+. .++...|++.+++.+++++.++...
T Consensus 348 ~~G~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 348 LGNQVSLH----------------LGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhc----------------cChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99887631 1445567888888877777665554
No 9
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=1.4e-23 Score=222.05 Aligned_cols=375 Identities=10% Similarity=-0.003 Sum_probs=241.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
...+.++.+.+..+...++.....+.+|.|+.+++|.|..+.+++.+.+.++..+++++.|+++||+ ||||+++++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLA 90 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHH
Confidence 3446677777788888888888889999999999999999999999999999999999999999999 999999999887
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+........+. ....+.+.++++|+++|++.+...+...+++.|.+|++ +|++++++
T Consensus 91 ~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~ 152 (392)
T PRK12382 91 CGLAGLAYLLAAILPV------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSW 152 (392)
T ss_pred HHHHHHHHHhhhcccc------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhH
Confidence 7766544333211010 00145778999999999999988888888999999877 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCC
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLP 264 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (584)
.+.+.++|..++|.+++++.+.+||++.+.+..+..++.. .... +.++.++++ +.
T Consensus 153 ~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-~~-------------------- 207 (392)
T PRK12382 153 NGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFNG-TVRKVPAHA-GE-------------------- 207 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHHH-hccCCCCCc-cc--------------------
Confidence 9999999999999999999888999987665544322221 1111 111100000 00
Q ss_pred CCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH-HHHHHHhhhhhhhhccc
Q 007932 265 DNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM-ALIWLVTLIPSTIWAQI 343 (584)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (584)
. . ++.+ ..|..+.. .........+.......
T Consensus 208 -~----------------------~---~~~~----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~ 239 (392)
T PRK12382 208 -R----------------------P---SLWS----------------------VVGLIWKPGLGLALQGVGFAVIGTFV 239 (392)
T ss_pred -C----------------------c---hHHH----------------------HHHHHHHhHHHHHHHHHHHhHHHHHH
Confidence 0 0 0000 00000000 00011111111111111
Q ss_pred cceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007932 344 NTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAY 423 (584)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~ 423 (584)
+.++ .+ .. +. ..........++.+++.++.+++.+|+.+| +.+..+..+.+++.....
T Consensus 240 ~~~~-~~-----~~----~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~ 297 (392)
T PRK12382 240 SLYF-AS-----KG----WA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV-----------KVAIVSLLVETVGLLLLW 297 (392)
T ss_pred HHHH-Hh-----cC----Cc-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------eehHHHHHHHHHHHHHHH
Confidence 1111 10 01 11 111222233444555556666555444433 224556666666655444
Q ss_pred HHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHH
Q 007932 424 AVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSF 503 (584)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~ 503 (584)
.. .+.+..+...++.+++.+...+.....+.+.+|++.||++.|++++...+|+.+++.
T Consensus 298 ~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 298 LA---------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred Hc---------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 123344556677788888888887788888999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHh
Q 007932 504 LVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFW 550 (584)
Q Consensus 504 l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~ 550 (584)
+.+.+.+.. ++...|.+.+++.+++.++.+.
T Consensus 357 ~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 357 LAGMLATSF----------------GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHh----------------CchHHHHHHHHHHHHHHHHHHh
Confidence 998876422 3455677777777666555443
No 10
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.92 E-value=1.8e-23 Score=221.83 Aligned_cols=169 Identities=14% Similarity=0.132 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
++++...++.+.+.+.+.++++.|+++++|.|..+.|++.+...+...+.++++|+++||+ |||+++.++.++.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999999999999999999999999999999999999 999999999999999988
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++... ++.+.+++.|++.|++.+...|...+++.|.+|++ +|+++.++.+...+
T Consensus 92 ~~~~~--------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~ 145 (400)
T PRK11646 92 TMAIA--------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQDS 145 (400)
T ss_pred HHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHH
Confidence 88765 45777899999999999988899999999999987 59999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 227 (584)
+|..+||.+++++. .++|++.|++.++..++..++.
T Consensus 146 ~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 146 AGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 6899999998877655554443
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.2e-22 Score=207.96 Aligned_cols=379 Identities=13% Similarity=0.072 Sum_probs=267.8
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
+.+..|..++.+.++.|.....=+.....+| -+.+++|.+..++|+.++.|.++..++.|+...+.||+ .||++++..
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~ 84 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGL 84 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHH
Confidence 3456778888888888888888887766665 45789999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
+.++.++.++++++ ++++++.++|++.|+..|.+++...++.++..|++ +|+++
T Consensus 85 l~lFi~~n~l~alA--------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~~A 138 (394)
T COG2814 85 LALFIVSNLLSALA--------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPG------KRGRA 138 (394)
T ss_pred HHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chhhH
Confidence 99999999999998 67999999999999999999999999999999999 69999
Q ss_pred eeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCC-CChhhhhHHHHHHHHhhcc
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKT-KSPARDLIRVPIAAFRNRK 260 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 260 (584)
.++...+..+..++|..++.++.+.+|||..|++.+...+++.+..+...| +++.++. +.+..+..
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~~----------- 205 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGPLRTLL----------- 205 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcchhHHH-----------
Confidence 999999999999999999999999999999999988887777777666555 1111111 01000000
Q ss_pred ccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhh
Q 007932 261 IQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIW 340 (584)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (584)
+.+ .+.+....+...++.....+..+
T Consensus 206 --------------------------------~~l----------------------~~p~v~~~l~~t~l~~~g~F~~f 231 (394)
T COG2814 206 --------------------------------RLL----------------------RRPGVLLGLLATFLFMTGHFALY 231 (394)
T ss_pred --------------------------------HHh----------------------cCchHHHHHHHHHHHHcchhhhH
Confidence 000 01122223334444444444444
Q ss_pred ccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 007932 341 AQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIA 420 (584)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~ 420 (584)
.+..++..... +++ .....+......++.+++..+.+++.|| ..| +.+.....++++.++
T Consensus 232 tYi~P~L~~v~-g~s-------~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----------~~l~~~~~l~a~~~l 291 (394)
T COG2814 232 TYIRPFLESVA-GFS-------VSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----------RALIAALLLLALALL 291 (394)
T ss_pred HhHHHHHHHcc-CCC-------HhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----------hHHHHHHHHHHHHHH
Confidence 44443332211 111 1122344445566667777766666554 222 235555566666666
Q ss_pred HHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHH
Q 007932 421 IAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFL 500 (584)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~l 500 (584)
.+.+.. .+.+..+...++.+++..........-..+.. ++.++.+++++....++|..+
T Consensus 292 ~l~~~~--------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 292 ALTFTG--------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred HHHHhc--------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHH
Confidence 655541 22333444445566666555555555555533 477999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhh
Q 007932 501 NSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWAS 552 (584)
Q Consensus 501 g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~ 552 (584)
|..+.+.+.+. .++....++.+.+.+++.++.+...
T Consensus 351 GA~lGG~v~~~----------------~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 351 GAALGGLVLDA----------------LGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHh----------------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988742 2445556677776666665554443
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.91 E-value=4.6e-23 Score=219.02 Aligned_cols=356 Identities=13% Similarity=0.073 Sum_probs=232.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
.+|..+.+.....+.+.+..+......| .+.+++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 5556666777778888887776655555 45678999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+++.+. .+.+.+++.|++.|++.+...+...+++.|.+|++ +|++++++
T Consensus 90 ~~~~~~~~~~~--------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~ 143 (406)
T PRK11551 90 FGLFSLATAQA--------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTAVSL 143 (406)
T ss_pred HHHHHHHHHHh--------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHHHHH
Confidence 88888777765 45778999999999999999999999999999987 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCC
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLP 264 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (584)
.+...++|..+++.+++.+.+..+|++.|++.++..++..+......++.++..+++ . + +
T Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~---------------~----~ 203 (406)
T PRK11551 144 MYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA-G---------------A----G 203 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc-C---------------c----c
Confidence 999999999999999988888899999999877654444433333222111000000 0 0 0
Q ss_pred CCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH-HHHHHHhhhhhhhhccc
Q 007932 265 DNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM-ALIWLVTLIPSTIWAQI 343 (584)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (584)
++. ....+.. . + ....++.... ...+.....++....+.
T Consensus 204 ~~~------------------------~~~~~~~-~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (406)
T PRK11551 204 KQR------------------------APVLRAL-F------------G---EGRATATLLLWISYFFTLIVLYFLLNWL 243 (406)
T ss_pred hhh------------------------hhhHHHH-h------------h---hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000 0 0 0001111111 11111112222222222
Q ss_pred cceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007932 344 NTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAY 423 (584)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~ 423 (584)
+.+... .... ....+.+.....++.+++..+.+++.+|+.+|+ .+.++.+..++++....
T Consensus 244 p~~~~~------~g~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 244 PSLLVG------QGLS---RSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR-----------VVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHh------CCCC---hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHHHHHHHHHHHHH
Confidence 221111 1111 112233444455566666666666666555442 23334444444443333
Q ss_pred HHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHH
Q 007932 424 AVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSF 503 (584)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~ 503 (584)
.. .+.+.+....++.+++.....+...++..+.+|++.|+++.|+.+....+|+.+++.
T Consensus 304 ~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~ 362 (406)
T PRK11551 304 AA---------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPL 362 (406)
T ss_pred hc---------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhh
Confidence 22 123334445566677777777888888899999999999999999999999999999
Q ss_pred HHHHhh
Q 007932 504 LVTLVD 509 (584)
Q Consensus 504 l~~~i~ 509 (584)
+.+.+.
T Consensus 363 ~~g~l~ 368 (406)
T PRK11551 363 LAGQLL 368 (406)
T ss_pred hHhhhh
Confidence 987765
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=6.8e-23 Score=229.09 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLT 113 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~ 113 (584)
.++.+...+.... .....+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.+++.++++
T Consensus 173 ~l~~~~~g~d~~~-is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~a 250 (742)
T TIGR01299 173 GLALMADGVEVFV-VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSS 250 (742)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHH
Confidence 3333444333333 34445567788999999999999999999999999999999999 999999999999999888888
Q ss_pred HhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhH
Q 007932 114 MAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGA 193 (584)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 193 (584)
++ ++.+.++++|++.|++.|+..+...+++.|.+|++ +|++.+++......+|.
T Consensus 251 fa--------------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~------~Rg~~~g~~~~~~~iG~ 304 (742)
T TIGR01299 251 FV--------------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE------KRGEHLSWLCMFWMIGG 304 (742)
T ss_pred HH--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHH
Confidence 76 45778999999999999999999999999999988 69999999999999999
Q ss_pred HHHhhhhhhhhcc-------------cchhHHHHHHHHHHHHHHHHHHHhC
Q 007932 194 LCATLGLVYIQEN-------------LGWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 194 ~~g~~~~~~l~~~-------------~~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
++++.++.++... .+||+.+++.++..++.++..++.+
T Consensus 305 ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lP 355 (742)
T TIGR01299 305 IYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMP 355 (742)
T ss_pred HHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9998776555432 3689988887776666555544443
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=5.1e-23 Score=215.37 Aligned_cols=161 Identities=10% Similarity=0.041 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 007932 41 RMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKF 120 (584)
Q Consensus 41 ~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (584)
++....+.+.+ +.+++++|+|+.+.+++.+.+.+++.+++++.|+++||+ |||++++.+++....+.+ +....
T Consensus 4 ~~~~~~~~~~l-p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~---- 76 (368)
T TIGR00903 4 QAIWVTFSPVL-SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP---- 76 (368)
T ss_pred hHHHHHHHhhH-HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh----
Confidence 34444444444 455789999999999999999999999999999999999 999987665555444432 22221
Q ss_pred cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhh
Q 007932 121 MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGL 200 (584)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 200 (584)
.+...++++|+++|++.+. .+...+.++|++|++ +|+++.++.+.+.++|..+++.++
T Consensus 77 ---------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~~ 134 (368)
T TIGR00903 77 ---------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAAG 134 (368)
T ss_pred ---------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577899999999999986 455566679999987 699999999999999999999999
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 201 VYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 201 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+++.+.+|||+.|++.++..++..++.+..
T Consensus 135 ~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 135 LKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998777655554444443
No 15
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=4.7e-23 Score=219.93 Aligned_cols=385 Identities=12% Similarity=0.035 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
..++...++..++.......+|.+. ++++.++.+.+++.+.+.++..+++++.|+++||+ ||||+++++.++.+++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~ 97 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFI 97 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHH
Confidence 3444445556666555556666665 46778999999999999999999999999999999 999999998887777766
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++....... ..+.+.+++.|++.|++.+...++..+++.|.+|++ +|+++.++.+...+
T Consensus 98 ~~~~~~~~~---------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 156 (417)
T PRK10489 98 GLALNAFLP---------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVR 156 (417)
T ss_pred HHHHHHHcC---------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHh
Confidence 654321000 145677888999999998888888899999999887 58999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCc
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSEL 270 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (584)
+|..+||.+++.+.+..+|++.|++.++..++..+..+..++. +++++++ ++ ..
T Consensus 157 ~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~--------------------~~--~~ 210 (417)
T PRK10489 157 LGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPAL----PPPPQPR--------------------EH--PL 210 (417)
T ss_pred HHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCC----CCCCccc--------------------cc--ch
Confidence 9999999999999888899999988777665555443332211 1110000 00 00
Q ss_pred cccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEe
Q 007932 271 HEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQ 350 (584)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (584)
.+..+..+. ..+.+.+....................+.+ ..+
T Consensus 211 ---------------------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 252 (417)
T PRK10489 211 ---------------------RSLLAGFRF----------------LLASPVVGGIALLGGLLTMASAVRVLYPAL-ADE 252 (417)
T ss_pred ---------------------HHHHHHHHH----------------HHcChHHHHHHHHHHHHHHHHhHHHhhHHH-HHh
Confidence 000000000 000111111111111111111111111111 111
Q ss_pred cccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007932 351 GTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRM 430 (584)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~ 430 (584)
. ...+ ....+.+.....++.+++..+.+++ .+|. +..+.+..+.++.+++++.....
T Consensus 253 ~----~g~~---~~~~g~~~~~~~~g~~ig~~~~~~l----~~~~-------~~~~~l~~~~~~~~~~~~~~~~~----- 309 (417)
T PRK10489 253 V----WQMG---AAQIGLLYAAVPLGAALGALTSGWL----AHSA-------RPGLLMLLSTLGSFLAVGLFGLM----- 309 (417)
T ss_pred c----cCCC---hhHhHHHHHHHHHHHHHHHHHHHHh----hhcc-------CcchHHHHHHHHHHHHHHHHHcc-----
Confidence 0 0110 1122334444455555655555544 3331 11223555666666555544332
Q ss_pred hhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 431 HVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
.+++..+...++.+++.....+...+++.+..|++.||++.|+++....+|..+|+.+.+.+.+
T Consensus 310 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 310 ----------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred ----------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 1233445566677888877777778888899999999999999999999999999999988764
Q ss_pred hhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 007932 511 VTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYVY 557 (584)
Q Consensus 511 ~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~ 557 (584)
.. +....+...+...++..++.....++.|+
T Consensus 374 ~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 374 MM----------------TPVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred Hh----------------chhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 22 22234555555555544444444444443
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=1e-22 Score=220.81 Aligned_cols=176 Identities=9% Similarity=0.007 Sum_probs=135.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+++.+.....+.++.....+.+.+.+ .++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 34444455555555555555555444 366889999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.++++++ .+.+.+++.|++.|++.+... ....+++|++|++ +|+++.++.
T Consensus 112 ~~~~~~~~~~--------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~------~rg~a~g~~ 164 (476)
T PLN00028 112 APAVFCMSLV--------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK------IVGTANGIA 164 (476)
T ss_pred HHHHHHHHHh--------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh------heeHHHHHH
Confidence 8888877776 346678889999999887654 3456789999987 599999998
Q ss_pred hhHHhHhHHHHhhhhhhhhc---------ccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFSSFIGALCATLGLVYIQE---------NLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~---------~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+...++|+.+++.+.+.+.. ..|||+.|++.++..++..+..++.
T Consensus 165 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 165 AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888887766655422 2589999999887765555444443
No 17
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1.3e-22 Score=219.99 Aligned_cols=178 Identities=10% Similarity=0.044 Sum_probs=153.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
.|.+|.+.+..++.....+.+.+.+|.|.+ ++|.++.+.+++.+.+.++..++.+++|+++||+ ||||+++.+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 456788888888888888888888887765 6999999999999999999999999999999999 99999999998888
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+++.++ ++.+.++++|+++|++.+...|...+++.|.+|++ +|+++.++.+
T Consensus 87 ~~~~~~~~~--------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 140 (471)
T PRK10504 87 LGSLFCALS--------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVT 140 (471)
T ss_pred HHHHHHHHh--------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence 888877765 45777899999999999999999999999999877 5899999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
...++|..+||.+++++.+..+|++.|++......+..+......+
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999877665555544444333
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=6.1e-23 Score=220.22 Aligned_cols=168 Identities=11% Similarity=0.032 Sum_probs=142.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
..+..++..+...+..+.+...++.+ .+++|++..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 33444555555555555555666655 457999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhH
Q 007932 109 MILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFS 188 (584)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (584)
.++++++ ++.+.+.+.|++.|++.|...+...+++.|++|++ +|++++++++..
T Consensus 102 ~~~~~~~--------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~ 155 (434)
T PRK11663 102 NILFGFS--------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTA 155 (434)
T ss_pred HHHHHHH--------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHH
Confidence 8888876 45777889999999999998999999999999987 599999999999
Q ss_pred HhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHH
Q 007932 189 SFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 189 ~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~ 224 (584)
.++|..+++.+.+++.+.+|||+.|++.++..++..
T Consensus 156 ~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 156 HNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999999999999999998999999998776644443
No 19
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=3e-23 Score=219.73 Aligned_cols=178 Identities=12% Similarity=0.053 Sum_probs=155.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
.+.+|..+.+....++...+.+.+.++++.|+++++|+|..+.+++.+.+.++..+.+++.|+++||+ |||++++++.+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~ 81 (395)
T PRK10054 3 LSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAIT 81 (395)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+..++.+++.+. ++.+.++++|.+.+.+.+...+...++..|.+|++ +|+++++
T Consensus 82 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g 135 (395)
T PRK10054 82 AFASGFIAIPLV--------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSST------SKTKIFS 135 (395)
T ss_pred HHHHHHHHHHHH--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHH
Confidence 888888877776 34666777888888887777888999999999877 5999999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+.+...++|..+||.+++++.+ .+|+.+|++.++..++..+....
T Consensus 136 ~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 136 LNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 78999999887776665444433
No 20
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.91 E-value=4.3e-23 Score=224.09 Aligned_cols=188 Identities=14% Similarity=0.149 Sum_probs=140.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--------CCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQL--------HEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWT 97 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--------~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~ 97 (584)
+.+.+++..+..+...+....+.+..+ .+++++ +.+..+.+++.+.+.++..++++++|+++||+ ||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 445555566666666555443333333 344444 88889999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcc
Q 007932 98 FTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNL 177 (584)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (584)
++++.+++.++.+++++... ... .. ..++......++++|+++|++.|...+...++++|++|++ +
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~-~~~------~~-~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~ 153 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEF-GFT------SI-GPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH------I 153 (479)
T ss_pred HHHHHHHHHHHHHHHHhhcc-ccc------cc-cccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh------h
Confidence 99999999888877765310 000 00 0011234567889999999999999999999999999988 5
Q ss_pred cceeeeeehhHHhHhHHHHhhhhhhhh--------cccchhHHHHHHHHHHHHHHHHHHH
Q 007932 178 KVSFFNWWMFSSFIGALCATLGLVYIQ--------ENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 178 r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|++++++...+..+|..+++.++..+. +..|||+.|++.++..++..+..++
T Consensus 154 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 154 RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999877665442 3578999999887765555444333
No 21
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=3e-23 Score=224.76 Aligned_cols=156 Identities=12% Similarity=-0.028 Sum_probs=129.3
Q ss_pred HHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcC
Q 007932 52 VNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICS 131 (584)
Q Consensus 52 ~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (584)
.+.+.+++|++..+.+++.+.+.+++.+++++.|+++||+ ||||++.+++++.+++.++.+.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 4457789999999999999999999999999999999999 99999999888877777666653100
Q ss_pred CCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhccc---c
Q 007932 132 KTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENL---G 208 (584)
Q Consensus 132 ~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---~ 208 (584)
..++.+.+++.|+++|++.+...|...++++|++|++ +|+++++++..+.++|..+++.+..++.+.. +
T Consensus 118 --~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~ 189 (467)
T PRK09556 118 --GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGH 189 (467)
T ss_pred --ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCc
Confidence 0156888999999999999999999999999999988 5999999999999999999998887776543 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 007932 209 WGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 209 ~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|+..|.+.++..++..++.+.
T Consensus 190 ~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 190 VIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 888888877665544444333
No 22
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.91 E-value=3.1e-23 Score=229.10 Aligned_cols=336 Identities=25% Similarity=0.443 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007932 42 MAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFM 121 (584)
Q Consensus 42 ~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (584)
+++|++.+.+..|+++.+|++.+.+..+.+.+.....+.++++|+++|+++||+|+++++.++..+|..++++.+..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999888875421110
Q ss_pred CCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhh
Q 007932 122 KPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLV 201 (584)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 201 (584)
........+++..+.++|.|+++|+..+..+|+++++++ ++|.+++.+++++.|+|+.+++++.+
T Consensus 81 ------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~ 145 (654)
T TIGR00926 81 ------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITP 145 (654)
T ss_pred ------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012334577888899999999999999999999986532 25889999999999999999999999
Q ss_pred hhhcc-------cchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccc
Q 007932 202 YIQEN-------LGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFD 274 (584)
Q Consensus 202 ~l~~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (584)
++.+. .+|...|.+++++.+++++++...++.+++.+|.+ ++.....+.+..+.+++....+.+
T Consensus 146 ~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~g-s~l~~v~~vi~~a~~~~~~~~~~~-------- 216 (654)
T TIGR00926 146 ILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKG-NIVSKVIKCIVTALRKRFSTRSEH-------- 216 (654)
T ss_pred HHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCc-cHHHHHHHHHHHHHHHhhccCCcc--------
Confidence 99744 36999999999999999888888777776666655 555555566555555443211100
Q ss_pred cccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEecccc
Q 007932 275 TQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQGTTL 354 (584)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (584)
...+|++.+... ...+.+++.|++++.+.++...+++|..+.|..+.+..|...+
T Consensus 217 ---------------~~~~~ld~a~~~----------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m 271 (654)
T TIGR00926 217 ---------------WPLHWLDYAKDK----------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRM 271 (654)
T ss_pred ---------------cchhHHHHhccc----------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence 001233322111 1223467789999999999999999999999998887777777
Q ss_pred cCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007932 355 NRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRM 430 (584)
Q Consensus 355 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~ 430 (584)
+..++ ++.+++++++.++++..++..|+.++.+.+..+|+. .+.++.+++.+|+++.++++++++..+..+.
T Consensus 272 ~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~---~~ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 272 DGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCG---TRFTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred cCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcC---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66665 678899999999999999999999977777666542 2457899999999999999999998875554
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.90 E-value=9.2e-23 Score=222.43 Aligned_cols=399 Identities=12% Similarity=0.035 Sum_probs=240.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
|..+..+++..+........+...+| .+.+++|.+..+.+|+.+.+.++..++.+++|+++||+ |||++++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34455556666666666655555555 44679999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.++++.+ ++.+.++++|+++|+|.+...|.....+.+.+++++ +|+++++++.
T Consensus 83 ~~~~~~~~a--------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~~~ 137 (495)
T PRK14995 83 LASLAAAFS--------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGVWA 137 (495)
T ss_pred HHHHHHHHc--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHHHH
Confidence 999999987 568889999999999999988888888888875443 6999999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHH------HHHHHHhhcc
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIR------VPIAAFRNRK 260 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 260 (584)
...++|..+||.+++++.+++|||+.|++.....++..++.....++.+.++.++ .+...... .+...++...
T Consensus 138 ~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~-~d~~g~~~~~~~~~~l~~~~~~~~ 216 (495)
T PRK14995 138 AVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQP-LNLGHALMLIVAILLLVYSAKTAL 216 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC-CChHhHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999887766555555444433221111111 11100000 0001111000
Q ss_pred ccCCCCCCCccccccccccccccccccCCCcchh-hhHHHHhcCC-CCCCCCCcccccchhhHHHHHHHHHH-HHhhhhh
Q 007932 261 IQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRC-LDKAAIKHGN-GGDSKPPCTVTQVEGTKLVLGMALIW-LVTLIPS 337 (584)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 337 (584)
. ...+... ... .-.... +.......+. ...|.. . .+.-+.|.+....... .....++
T Consensus 217 -~--~~~~~~~-------~~~-------~~~~~~~~l~~f~~~e~~~~~p~~--~-~~lf~~~~~~~~~~~~~~~~~~~~ 276 (495)
T PRK14995 217 -K--GFLSLWV-------TSL-------TLLTGALLLGLFIRTQLAASRPMI--D-MRLFTHRIILSGVVMAMTAMITLV 276 (495)
T ss_pred -c--cCCchHH-------HHH-------HHHHHHHHHHHHHHHHhcCCCCCc--C-HHHhCCcccHHHHHHHHHHHHHHH
Confidence 0 0000000 000 000000 0000000000 000000 0 0000011111111111 1111111
Q ss_pred hhhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHH
Q 007932 338 TIWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVM 417 (584)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i 417 (584)
...... +.+..+. .... ....+.......++..++.++.+++.+|..+| +.+..|+++.++
T Consensus 277 ~~~~~~-~~~lq~v----~g~s---~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~g~~~~~~ 337 (495)
T PRK14995 277 GFELLM-AQELQFV----HGLS---PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------LVATGGMALSAL 337 (495)
T ss_pred HHHHHH-HHHHHHH----cCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHHHHH
Confidence 111111 1111110 0100 12233334444555666666666665444433 235667777766
Q ss_pred HHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHH
Q 007932 418 AIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVG 497 (584)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg 497 (584)
+.+...... ...+.+......++.|++.+...+.....+.+.+|++.++.+.+++++.+.+|
T Consensus 338 ~~~~l~~~~------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG 399 (495)
T PRK14995 338 SFYGLAMTD------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELG 399 (495)
T ss_pred HHHHHHHhc------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHH
Confidence 665544331 01233344556778899999998888888889999999999999999999999
Q ss_pred HHHHHHHHHHhhh
Q 007932 498 NFLNSFLVTLVDK 510 (584)
Q Consensus 498 ~~lg~~l~~~i~~ 510 (584)
+.+|+.+.+.+..
T Consensus 400 ~~~G~ai~g~i~~ 412 (495)
T PRK14995 400 AGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=2.7e-22 Score=212.31 Aligned_cols=177 Identities=12% Similarity=0.065 Sum_probs=154.3
Q ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHH
Q 007932 20 LSSKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFT 99 (584)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~ 99 (584)
...+|..|+.+..+.++.+......|.....+|.+ .+++|+++.+.++..+.+.++..+++++.|+++||+ ||||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 34456678877777777777777777776666664 568999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
++.++.+++.+++.++ ++.+.+++.|+++|++.|...+...+++.|++|++ +|+
T Consensus 90 ~~~~~~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~~~ 143 (394)
T PRK10213 90 LFAVLLTLSCLLVSFA--------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR------TVP 143 (394)
T ss_pred HHHHHHHHHHHHHHHH--------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh------HHH
Confidence 9999999998888776 56888999999999999999999999999999987 599
Q ss_pred eeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHH
Q 007932 180 SFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~ 224 (584)
++.++.....++|..++|.+++++.+.+|||+.|++.++..++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998776544433
No 25
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=8.5e-23 Score=220.23 Aligned_cols=150 Identities=16% Similarity=0.097 Sum_probs=126.4
Q ss_pred HHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCC
Q 007932 53 NYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSK 132 (584)
Q Consensus 53 ~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (584)
..+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.++++++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345679999999999999999999999999999999998 999999999999999888887763
Q ss_pred CCcchHHHHHH-HHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhH
Q 007932 133 TSTSQIAFFYS-SLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGL 211 (584)
Q Consensus 133 ~~~~~~~~~~~-~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 211 (584)
+.+.+++ .|++.|++.+...+...+++.++++ + +|+++.++.+.+.++|..++|.+++++.+.+|||+
T Consensus 106 ----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 106 ----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-R------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred ----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-h------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHH
Confidence 3555544 5688899998776666778888885 4 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007932 212 GYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 212 ~f~~~~~~~~~~~~~~~~~ 230 (584)
.|++.++..+++.+..++.
T Consensus 175 ~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999888766555444443
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=1.2e-22 Score=213.31 Aligned_cols=154 Identities=14% Similarity=0.095 Sum_probs=137.0
Q ss_pred HHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCC
Q 007932 49 SNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNG 128 (584)
Q Consensus 49 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (584)
+...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..+++++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3444567889999999999999999999999999999999999 99999999999999998888876
Q ss_pred CcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccc
Q 007932 129 ICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
.+.+.++++|++.|++.+...+...+++.|.+|++ +|++++++.+...++|..+++.+++++.+..+
T Consensus 80 -------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 146 (399)
T TIGR00893 80 -------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIHFS 146 (399)
T ss_pred -------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC
Confidence 45788999999999999999999999999999987 59999999999999999999999999988899
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 007932 209 WGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 209 ~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|++.|++.++..++..+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 147 WQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred chHHHHHHHHHHHHHHHHhhh
Confidence 999999887765555544443
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=4.6e-22 Score=210.56 Aligned_cols=366 Identities=12% Similarity=0.040 Sum_probs=229.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 36 YEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMA 115 (584)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~ 115 (584)
...+.+..++...+.+| .+.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++++++.++++++
T Consensus 17 ~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 17 IGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred HHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence 33333333454555454 56789999999999999999999999999999999999 99999999999999999999987
Q ss_pred hhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHH
Q 007932 116 ASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALC 195 (584)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 195 (584)
++.+.++++|+++|++.+...+..+.++.|++| + +|+++++.+..+.++|..+
T Consensus 95 --------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~------~~~~~~g~~~~~~~~g~~~ 147 (393)
T PRK09705 95 --------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q------RTPLVMGLWSAALMGGGGL 147 (393)
T ss_pred --------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c------cchhHHHHHHHHHHHHHHH
Confidence 456778999999999999999999999999987 4 4899999999999999999
Q ss_pred Hhhhhhhhhccc-chhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccc
Q 007932 196 ATLGLVYIQENL-GWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFD 274 (584)
Q Consensus 196 g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (584)
++.+++++.++. +||..+.+.++..++.....+...+ ++|++ ++ +++.
T Consensus 148 g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~-------------------~~~~------- 196 (393)
T PRK09705 148 GAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA----REVAS-SH-------------------KTTT------- 196 (393)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcc-cc-------------------CCCc-------
Confidence 999999988875 8998877655544433332222211 11111 00 0000
Q ss_pred cccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH-HHHHHHhhhhhhhhccccceEEEeccc
Q 007932 275 TQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM-ALIWLVTLIPSTIWAQINTLFVKQGTT 353 (584)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (584)
. ..+ ....++.+.. ....+....++....+.+.++.. .+
T Consensus 197 -------~--------~~~-----------------------~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g 236 (393)
T PRK09705 197 -------T--------PVR-----------------------VVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE--IG 236 (393)
T ss_pred -------C--------Ccc-----------------------cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC
Confidence 0 000 0001111111 11222222333333333333211 11
Q ss_pred ccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 007932 354 LNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVI 433 (584)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~ 433 (584)
.+ ....+.+..+..++.+++....+++.++..+| +.+.++..+..++........
T Consensus 237 ~s-------~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----------~~~~~~~~l~~~~~~~~~~~~------- 291 (393)
T PRK09705 237 AS-------AQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----------KLLMLALVLQLVGFCGFIWLP------- 291 (393)
T ss_pred CC-------hhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHHHHHcc-------
Confidence 11 11223444455566666666665554433322 234555555555554433221
Q ss_pred cccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccC-CchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhh
Q 007932 434 RVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQS-PEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVT 512 (584)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~-P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~ 512 (584)
.+...+ ...+.+++.+...+.......+.. |++.+++..|+.+....++..+++.+.+.+.+..
T Consensus 292 -------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~ 356 (393)
T PRK09705 292 -------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS 356 (393)
T ss_pred -------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 123456666666666655555666 4678999999999999999999999998876432
Q ss_pred cCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 513 GRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 513 ~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
+++...|.+..+.+++..+....+.++++
T Consensus 357 ---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 357 ---------------GNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred ---------------CCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 13344566666666655555555555443
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=9.1e-23 Score=220.86 Aligned_cols=149 Identities=11% Similarity=0.069 Sum_probs=130.8
Q ss_pred hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcch
Q 007932 58 QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQ 137 (584)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (584)
+++++..+.+++.+.+.+++.++++++|+++||+ |||+++.++.++..++.+++..+.+ .+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~------------------~~ 130 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG------------------GG 130 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH------------------cC
Confidence 6889999999999999999999999999999999 9999999999988888877665421 33
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhccc-chhHHHHHH
Q 007932 138 IAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENL-GWGLGYGIP 216 (584)
Q Consensus 138 ~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~f~~~ 216 (584)
.+.+++.|+++|++.+...|....++.|++|++ +|+++.++...+.++|..+++.+++++.+.+ +|++.|++.
T Consensus 131 ~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~ 204 (465)
T TIGR00894 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVF 204 (465)
T ss_pred chHHHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhh
Confidence 567899999999999999999999999999988 5999999999999999999999999998884 999999998
Q ss_pred HHHHHHHHHHHHHhC
Q 007932 217 TAGLLFSLVIFYIGS 231 (584)
Q Consensus 217 ~~~~~~~~~~~~~~~ 231 (584)
++..++..++++...
T Consensus 205 ~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 205 GIVGCAWSLLWFVFP 219 (465)
T ss_pred hHHHHHHHHHHHHHh
Confidence 877666655554443
No 29
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.90 E-value=2.4e-22 Score=214.11 Aligned_cols=178 Identities=11% Similarity=0.026 Sum_probs=149.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
.+|+.++.+.+..+++.+....+.. ...++++++|++..+.+++.+.+.++..+++++.|+++||+ ||||++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 3455566666666666666655544 44588999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.++++++ ++.+.+++.|++.|++.+...|....++.|++|++ +|+++.++
T Consensus 83 ~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~~~~ 136 (412)
T TIGR02332 83 WGIASTATMFA--------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARANAL 136 (412)
T ss_pred HHHHHHHHHHh--------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHHHHH
Confidence 99999998886 45778999999999999999999999999999987 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhc------ccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 185 WMFSSFIGALCATLGLVYIQE------NLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~------~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
++.+.++|..+++.+++++.+ ..|||+.|++.++..++..++.++.
T Consensus 137 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 137 FMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999998864 3699999999877655544444443
No 30
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.90 E-value=6.2e-23 Score=221.37 Aligned_cols=145 Identities=17% Similarity=0.269 Sum_probs=124.5
Q ss_pred chhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHH
Q 007932 62 DTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFF 141 (584)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (584)
+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++....+ ..+.+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 130 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF-----------------ALSVEML 130 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc-----------------ccchHHH
Confidence 388999999999999999999999999999 9999999999999999888876531 1345679
Q ss_pred HHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhh---hhhhcccchhHHHHHHHH
Q 007932 142 YSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGL---VYIQENLGWGLGYGIPTA 218 (584)
Q Consensus 142 ~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~~~~~~~~~f~~~~~ 218 (584)
+++|+++|++.+...+...++++|.+|++ +|++++++.+.+.++|..+++.++ ..+.+..+||+.|++.++
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKA------LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChh------hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999988 599999999999999999999998 666677899999998666
Q ss_pred HHHHHHHHHHHh
Q 007932 219 GLLFSLVIFYIG 230 (584)
Q Consensus 219 ~~~~~~~~~~~~ 230 (584)
..++..+..++.
T Consensus 205 ~~~~~~~~~~~l 216 (481)
T TIGR00879 205 PAGLLFLGLFFL 216 (481)
T ss_pred HHHHHHHHHhcC
Confidence 555554444443
No 31
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.90 E-value=2.3e-22 Score=209.30 Aligned_cols=359 Identities=12% Similarity=-0.015 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007932 32 FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMIL 111 (584)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~ 111 (584)
.+....++..++.......+|.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ ||||+++++.++..++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3455666666666666677777765 5799999999999999999999999999999999 9999999999888888777
Q ss_pred HHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhH
Q 007932 112 LTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFI 191 (584)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 191 (584)
+......+ +.+.+.++++|++.|++.+...+...+++.|.+|++ +|++++++.+...++
T Consensus 81 ~~~~~~~~---------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 81 LPFVALLG---------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRSL 139 (365)
T ss_pred HHHHHHcC---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHHH
Confidence 77653111 136788999999999999999999999999999987 599999999999999
Q ss_pred hHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCcc
Q 007932 192 GALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELH 271 (584)
Q Consensus 192 g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (584)
|..++|.+++++.+..+|++.|++.++..++..+..+..+.+.+. ++++ .+.. +
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~--------------------~---- 193 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELA-ASEI-QALS--------------------N---- 193 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCC-Cccc-cccc--------------------h----
Confidence 999999999999998999999998877655554444333221100 0000 0000 0
Q ss_pred ccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH-HHHhhhhhhhhccccceEEEe
Q 007932 272 EFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI-WLVTLIPSTIWAQINTLFVKQ 350 (584)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 350 (584)
+..+ +..+..+. ..+.+.++..... +.....+........+.+..+
T Consensus 194 --~~~~---------------~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T TIGR00900 194 --AVLR---------------DTREGIKF----------------VLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSK 240 (365)
T ss_pred --hHHH---------------HHHhHHHH----------------HHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0000 00000000 0001112111111 111111111110111111111
Q ss_pred cccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007932 351 GTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRM 430 (584)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~ 430 (584)
.. ... ....+.+.....++.+++..+..++ .+|.. +.+.+..+..+.++++.......
T Consensus 241 ~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---- 298 (365)
T TIGR00900 241 YL----GRG---STHYGWVLAAFGLGALLGALLLGLL----GRYFK-------RMALMTGAIFVIGLAILVVGLTP---- 298 (365)
T ss_pred Hh----CCc---hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhc-------hhHHHHHHHHHHHHHHHHHHhhc----
Confidence 00 000 1112233344445555555555544 33321 12334555556666665554431
Q ss_pred hhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 431 HVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
+ +.+..+...++.+++.+...+...+++.+.+|++.|+++.|+.++...++..+++.+.+.+.+
T Consensus 299 ---------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 ---------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ---------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 244556667788999999999999999999999999999999999999999999999877753
No 32
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=4e-22 Score=211.71 Aligned_cols=378 Identities=16% Similarity=0.080 Sum_probs=239.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh-----hhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVS-----SVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSS 102 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 102 (584)
|....+.+..++..+++....+++|.|.+ ++|.+..+ .+++.+.+.++..++.++.|+++||+ |||++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 44566667778888888888888888875 58888654 47888899999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
++.+++.+++... .+.+.+++.|++.|++.+ ..+....++.|.+|++ +|+++.
T Consensus 92 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~~~~~~ 144 (408)
T PRK09874 92 LGMGIVMVLMGLA--------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRN------KSGWAL 144 (408)
T ss_pred HHHHHHHHHHHHH--------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh------hhhHHH
Confidence 8888888777765 457778999999998765 4577778889999877 589999
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhcccc
Q 007932 183 NWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQ 262 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (584)
++.+...++|..++|.+++.+.+.++|++.|++.++..++..+..+...++.+ ++.++....+. +
T Consensus 145 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~------------ 209 (408)
T PRK09874 145 GTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF--QPVSKKEMLHM-R------------ 209 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc--ccccchhhhHH-H------------
Confidence 99999999999999999999998899999999888776555554444332111 01000000000 0
Q ss_pred CCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH-HHHhhhhhhhhc
Q 007932 263 LPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI-WLVTLIPSTIWA 341 (584)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 341 (584)
+.++ . ..+.+..+..... ............
T Consensus 210 ------------------------------~~~~-----------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T PRK09874 210 ------------------------------EVVT-----------S--------LKNPKLVLSLFVTTLIIQVATGSIAP 240 (408)
T ss_pred ------------------------------HHHH-----------h--------CcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000111111111 111111111101
Q ss_pred cccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHH
Q 007932 342 QINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAI 421 (584)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~ 421 (584)
..+.+. ... ..... ......+.+..+..++.++..+..+++.+|+.+| +.+..+..+..++++.
T Consensus 241 ~~~~~~-~~~---~~~~~-~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~ 304 (408)
T PRK09874 241 ILTLYV-REL---AGNVS-NIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----------KILITALIFSVLLLIP 304 (408)
T ss_pred HHHHHH-HHH---hccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----------hhHHHHHHHHHHHHHH
Confidence 111111 100 00000 0000111222333455556666666665554443 2244555555444443
Q ss_pred HHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHH
Q 007932 422 AYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLN 501 (584)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg 501 (584)
.... .+.+.+....++.+++.+...+...+++.+..|++.+|+..++++....+|..+|
T Consensus 305 ~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~g 363 (408)
T PRK09874 305 MSFV---------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTG 363 (408)
T ss_pred HHHh---------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhh
Confidence 3332 1233445566678888888888888888888999999999999999999999999
Q ss_pred HHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhh
Q 007932 502 SFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWA 551 (584)
Q Consensus 502 ~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~ 551 (584)
+.+.+.+.+. .++...|++.+++.+++.+..+..
T Consensus 364 p~~~G~l~~~----------------~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 364 PLMGAAISAN----------------YGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHhh----------------cchhHHHHHHHHHHHHHHHHHHHH
Confidence 9998777531 134566787877777766554443
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=2e-22 Score=210.69 Aligned_cols=349 Identities=12% Similarity=0.033 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
........+.....|.+ +.+.+++.+++|++..+.+++.+.+.++..+++++.|+++||+ |||++++++.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~ 83 (377)
T TIGR00890 6 LVGTVIMCFTSGYVYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFT 83 (377)
T ss_pred eHHHHHHHHHhhHHhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHH
Confidence 33333333333335544 4455677889999999999999999999999999999999999 999999999999999998
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
+++++ ++.+.++++|++.|++.+...+.....+.+.+|+ +|+++.++...+.+
T Consensus 84 ~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 136 (377)
T TIGR00890 84 FYAIA--------------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYG 136 (377)
T ss_pred HHHHH--------------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcc
Confidence 88887 4578899999999999998888888888888874 38999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCc
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSEL 270 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (584)
+|..+++.+.+.+.+..+||+.|++.++..++..+..+...++.+++.+++ .+ ..
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~--~~ 191 (377)
T TIGR00890 137 LGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKT-----------------------NI--EV 191 (377)
T ss_pred hhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhcccc-----------------------Cc--cc
Confidence 998887777777777789999999888766555544443322111000000 00 00
Q ss_pred cccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHH-HHhhhhhhhhccccceEEE
Q 007932 271 HEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIW-LVTLIPSTIWAQINTLFVK 349 (584)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 349 (584)
.+ + ..++.+ ...++..+...... ............... +.
T Consensus 192 ~~---~--------------~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 232 (377)
T TIGR00890 192 SV---K--------------DYTVWE--------------------MLRTPQFWVLYLSFFLNAVSGLLLIGLYKP-YG- 232 (377)
T ss_pred ch---h--------------hhhHHH--------------------HHcCccHHHHHHHHHHHhHHHHHHHHHHHH-HH-
Confidence 00 0 000000 00011111111111 111111111111111 10
Q ss_pred ecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 007932 350 QGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRR 429 (584)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~ 429 (584)
+ +.... ......+.....+..+++.++..++.||+.||+ .+.++.++.+++........
T Consensus 233 ~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~~~~~~~~~~~~~~--- 291 (377)
T TIGR00890 233 Q----SLGLS---DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK-----------TMSIVFGISAVGMAAMLFIP--- 291 (377)
T ss_pred H----HcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----------hhhHHHHHHHHHHHHHHHcc---
Confidence 1 11110 111233445555666677777777766665542 24556666666655444331
Q ss_pred hhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhh
Q 007932 430 MHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVD 509 (584)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~ 509 (584)
.......+...++.+++.+...+....++.|..|++.|+++.|+.+....+|..+++.+.+.+.
T Consensus 292 ----------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 292 ----------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred ----------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111222233445556555555666677889999999999999999999999999999988775
No 34
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.90 E-value=6.3e-22 Score=212.23 Aligned_cols=176 Identities=17% Similarity=0.142 Sum_probs=131.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---Cchhhhhh---HHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLH---EDTVSSVR---NVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~---~~~~~~~~---~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
+.+....+..+++.+.... .++..+++.++++ .+..+.+. +.+...++..++++++|+++||+ ||||++.++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~ 99 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHH
Confidence 3444555667777877665 5666678888874 45554333 33444555559999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.++++++.++++++.+..+.. ......+++.|+++|++.|...|...++++|.+|++ +|+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~ 161 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIG------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFY 161 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHH------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHH
Confidence 999999999988763211000 012346899999999999999999999999999988 59999
Q ss_pred eeeehhHHhHhHHHHhhhhhhhh--------cccchhHHHHHHHHHHHHH
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQ--------ENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~--------~~~~~~~~f~~~~~~~~~~ 223 (584)
.++.+.+.+.|..+++.+...+. ..+|||++|++.++..++.
T Consensus 162 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 162 ASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 99888888888888877655543 2579999999876654443
No 35
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.2e-22 Score=200.68 Aligned_cols=181 Identities=13% Similarity=0.084 Sum_probs=157.7
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHH---HHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHH
Q 007932 23 KTGKWKACAFLVGYEAFERMAFYGIQSNL---VNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFT 99 (584)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~ 99 (584)
.+.+.|.-+.++...++..+++|-+.-.+ .+++.++.++|.+|.|.+.+.+++.+.++-.+.|.++||. +.|+.+-
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~ 98 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeeh
Confidence 33444455667777788888888665444 4688899999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
+++++.++..++++++ .+...+.+.-++.|...|.-.|.....++.+++.+ +||
T Consensus 99 ~gLilsai~nil~Gfs--------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~------eRG 152 (448)
T COG2271 99 FGLILSAIVNILFGFS--------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK------ERG 152 (448)
T ss_pred HHHHHHHHHHHHHhhh--------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc------ccC
Confidence 9999999999999998 45778999999999999999999999999999998 499
Q ss_pred eeeeeehhHHhHhHHHHhhhh--hhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 180 SFFNWWMFSSFIGALCATLGL--VYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+..++++.+-|+|+.+.|.+. +++..+++||..|++++++.++..++.+..
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 899888899999999998866555555443
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=9.9e-22 Score=208.91 Aligned_cols=174 Identities=14% Similarity=0.095 Sum_probs=140.2
Q ss_pred chhHHHHHHHHHH---HHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 28 KACAFLVGYEAFE---RMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 28 ~~~~~~~~~~~~~---~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
+..+..+...+.+ .++...+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||+++++.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~ 87 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 3344444443333 3444445555554 4578999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+++..+ ++.+.+++.|++.|++.+...+...+.+.|.+|++ +|.++.++
T Consensus 88 ~~~~~~~~~~~--------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~ 141 (406)
T PRK15402 88 FILTCLAILLA--------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA------DAIKITAL 141 (406)
T ss_pred HHHHHHHHHHH--------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh------HHHHHHHH
Confidence 88888887776 45777899999999999988888899999999887 47888888
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
......+|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 142 ~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 142 MANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999988889999999877776655554433
No 37
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=6.9e-22 Score=209.07 Aligned_cols=174 Identities=16% Similarity=0.245 Sum_probs=151.0
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
.++.+|+.+....+..+...+..+......+ .+++++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 4467777777888888888888777766555 56789999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.++.+++.+++.++ ++.+.+++.|++.|++.+...+...+++.|.+|++ +|+++
T Consensus 84 ~~~~~~~~~~~~~~--------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~ 137 (405)
T TIGR00891 84 IVLFSAGTLACGFA--------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNKA 137 (405)
T ss_pred HHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhHH
Confidence 99999988888776 45778999999999999999999999999999987 59999
Q ss_pred eeeehhHHhHhHHHHhhhhhhhhcccc--hhHHHHHHHHHHHHH
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQENLG--WGLGYGIPTAGLLFS 223 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~~~~~--~~~~f~~~~~~~~~~ 223 (584)
.++.+...++|..+++.+++.+.+..+ |++.|++.++..++.
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999887666 999998765544443
No 38
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.89 E-value=2.6e-21 Score=211.48 Aligned_cols=184 Identities=13% Similarity=0.100 Sum_probs=139.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQ-----LHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTL 100 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~ 100 (584)
+++.+.+..+..+.+.+....+....+. +.++ .+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 3444555555566666655544444443 3322 244566778999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccce
Q 007932 101 SSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVS 180 (584)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (584)
+.++..++.++++.+.+ .....+.+.++++|+++|++.|...+..+++++|.+|++ +|++
T Consensus 92 ~~~~~~v~~~~~~~~~~--------------~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~------~Rg~ 151 (502)
T TIGR00887 92 ELIIMIIATVASGLSPG--------------SSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK------WRGA 151 (502)
T ss_pred HHHHHHHHHHHHHHccC--------------cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh------hHHH
Confidence 99999999888877531 000123578999999999999999999999999999998 5999
Q ss_pred eeeeehhHHhHhHHHHhhhhhhhhc-----------------------ccchhHHHHHHHHHHHHHHHHHHHhC
Q 007932 181 FFNWWMFSSFIGALCATLGLVYIQE-----------------------NLGWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 181 ~~~~~~~~~~~g~~~g~~~~~~l~~-----------------------~~~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
+.++.+....+|..+++.++.++.. .++||++|.+.++..++..+..+..+
T Consensus 152 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lp 225 (502)
T TIGR00887 152 MMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIP 225 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999887765431 24799999877766655555444443
No 39
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.89 E-value=1.1e-21 Score=213.85 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=132.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh-hhh-----HHHHHHHHHHHhhhHhHHHhhcccchhHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVS-SVR-----NVNNWSGVVWITPLLGAYIADTYIGRFWTFTL 100 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~ 100 (584)
+|.++...+..+++.+.+..+ .+...++.++++.+... ..+ +.+...++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVY-GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 455666677888888876654 44556778887643322 122 24667788999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccce
Q 007932 101 SSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVS 180 (584)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (584)
++++++++.++++++.+..++. -.....+++.|+++|++.|+..+...++++|++|++ +|++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~Rg~ 154 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KRGF 154 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CCcH
Confidence 9999999999999874311100 000124899999999999999999999999999988 5999
Q ss_pred eeeeehhHHhHhHHHHhhhhhhhh--------cccchhHHHHHHHHHHHH
Q 007932 181 FFNWWMFSSFIGALCATLGLVYIQ--------ENLGWGLGYGIPTAGLLF 222 (584)
Q Consensus 181 ~~~~~~~~~~~g~~~g~~~~~~l~--------~~~~~~~~f~~~~~~~~~ 222 (584)
+.++...+..+|..+|+.+...+. ..+|||++|++.++..++
T Consensus 155 ~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 155 MGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999988888888888876554432 257999999986654433
No 40
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=1e-21 Score=211.91 Aligned_cols=156 Identities=12% Similarity=0.086 Sum_probs=125.1
Q ss_pred HHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCC
Q 007932 49 SNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNG 128 (584)
Q Consensus 49 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (584)
....+|+.++ |++..+.+++.+.+.++..++++++|+++||+ |||++++++.++.+++.+++++...
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~----------- 115 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW----------- 115 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc-----------
Confidence 3444577777 99999999999999999999999999999999 9999999999999988887776521
Q ss_pred CcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHH-HHhhhhhhhhccc
Q 007932 129 ICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGAL-CATLGLVYIQENL 207 (584)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 207 (584)
...+.+.+++.|++.|++.|...+...+.+.|++|++ +|++++++++.+.++|+. .+|+++..+....
T Consensus 116 -----~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 116 -----ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred -----ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 0135667889999999999998888888899999887 599999999999999875 4555443443445
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 007932 208 GWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 208 ~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+||+.|++.++..++..++..
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 899999988776555444333
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=2.2e-21 Score=204.65 Aligned_cols=173 Identities=12% Similarity=0.027 Sum_probs=151.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
++.++.+.+..+......+...+.+|. +.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 466777788888888888877777765 4678999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.++++.+ ++.+.+++.|++.|++.+...+.....+.|++|++ +|+++++...
T Consensus 80 ~~~~l~~~~--------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 133 (382)
T PRK10091 80 IGNAMFTLS--------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGMV 133 (382)
T ss_pred HHHHHHHHh--------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHHH
Confidence 999888876 45788999999999999998888888899998876 5889999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 227 (584)
.+..+|..++|.+++++.+..+||+.|++.++..++..+..
T Consensus 134 ~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 134 SGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988999999998887655544433
No 42
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=5.9e-21 Score=202.22 Aligned_cols=175 Identities=9% Similarity=0.064 Sum_probs=147.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
.+++|..+...+..++.....+..-..++. +.+++|+|..+.+++.+.+.++..++++++|+++||+ ||||+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 456677777777777777776666665555 5678999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+..++.+++.++ ++.+.+++.|+++|++.|...+...+++.|.+|++ +|+++.+
T Consensus 81 ~~~i~~~l~~~~--------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~~ 134 (394)
T PRK03699 81 LMILAVAGLMFS--------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRLL 134 (394)
T ss_pred HHHHHHHHHHHc--------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHHH
Confidence 999998888876 45778899999999999999999999999999876 5899888
Q ss_pred eehhHHhHhHHHHhhhhhhhh-cccchhHHHHHHHHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQ-ENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~-~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
..+...++|+.++|.+.+++. +..+||+.|.+.++..++..++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 135 FTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 888888999999999888875 4579999999877665544433
No 43
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=2.3e-22 Score=208.39 Aligned_cols=166 Identities=19% Similarity=0.243 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLT 113 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~ 113 (584)
+++.++..++.....+.++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ ||||+++++.++.+++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4556666677666667777688899999999999999999999999999999999998 999999999999999966655
Q ss_pred HhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhH
Q 007932 114 MAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGA 193 (584)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 193 (584)
++ .+.+.++++|++.|++.+...+...+++.|.+|++ +|++++++.+...++|.
T Consensus 81 ~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g~ 134 (352)
T PF07690_consen 81 FA--------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLGS 134 (352)
T ss_dssp HH--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHHH
T ss_pred hh--------------------hhHHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhhhh
Confidence 54 23558999999999999999999999999999997 59999999999999999
Q ss_pred HHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 194 LCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 194 ~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
.++|.+++++.+..+|++.|++.++..++..++
T Consensus 135 ~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 135 ILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hcccchhhhhhhccccccccccccchhhhhhhh
Confidence 999999999998899999999988887777654
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.88 E-value=3.5e-21 Score=201.84 Aligned_cols=169 Identities=10% Similarity=0.028 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHH-HHHHHHHHHHHH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTL-SSLIYVLGMILL 112 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~-~~~~~~~~~~~~ 112 (584)
.+..++..++.....+.++.|+++++|.|+.+.+++.+.+.+...+..++.|+++||+ ||||.+++ +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3457777888888889999999999999999999999999999999999999999999 99987665 445555566666
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee--eeeehhHHh
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF--FNWWMFSSF 190 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~ 190 (584)
..+ ++.+.+++.|+++|.+.+...|...++..|..|++ +|.+. .+..+...+
T Consensus 82 ~~~--------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 135 (375)
T TIGR00899 82 AWN--------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRT------GREAVMFSSVMRAQIS 135 (375)
T ss_pred Hhc--------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc------chhhHHHHHHHHHHHh
Confidence 654 45677888898888887777888888888877655 34433 567777889
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+|..+||.+++++.+.++||+.|++.++..++..+..+.
T Consensus 136 ~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 136 LAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998899999999988765555554444
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.88 E-value=9.4e-22 Score=213.80 Aligned_cols=399 Identities=12% Similarity=0.062 Sum_probs=239.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
+..+++..+...+......... +++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 4445555666666655554444 455778999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
++++.+ ++.+.++++|+++|++.+...+...+++.|.+|++ +|+++++++....
T Consensus 82 ~~~~~~--------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~ 135 (485)
T TIGR00711 82 LLCGVA--------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGLTV 135 (485)
T ss_pred HHHhCc--------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHHHH
Confidence 888876 45778999999999999999999999999999987 5999999999999
Q ss_pred hHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhH--H----HHHHHHhhccccC
Q 007932 190 FIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLI--R----VPIAAFRNRKIQL 263 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~ 263 (584)
.+|..+||.+++++.++++|++.|++.+...++..++.....++.+++..++ .+..... . ..........
T Consensus 136 ~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~g~~l~~~~~~~~~~~~~~~~--- 211 (485)
T TIGR00711 136 LVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASEN-FDFLGLLLLSVGLGSLLYGLSEGP--- 211 (485)
T ss_pred HHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCC-CcHHHHHHHHHHHHHHHHHHhhCC---
Confidence 9999999999999999999999999887765555544444333211111111 1100000 0 0000000000
Q ss_pred CCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHH-HHHHHHHhhhhhhhhcc
Q 007932 264 PDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLG-MALIWLVTLIPSTIWAQ 342 (584)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 342 (584)
+...... .... ......... ...+... ..+. ..+. ...+.-..+.+.. ....+.....++.....
T Consensus 212 --~~~~~~~-~~~~-~~~~~~~~~---~~~~~~~-~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (485)
T TIGR00711 212 --ERGWFDS-NEIL-ILSITGLVA---IIAFVVW-ELTD---DNPL---VDLRLFKYRNFTIGCVYMSLLGLGLYGSFYL 277 (485)
T ss_pred --CCCCCCc-hHHH-HHHHHHHHH---HHHHHHH-HHcC---CCCc---cCHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000 000000000 0000000 0000 0000 0000000111111 11111111111111111
Q ss_pred ccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 007932 343 INTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIA 422 (584)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~ 422 (584)
.+.++ .+. .... ....+.+.....++.+++.++..++.+|..+| +.+.++..+.+++....
T Consensus 278 ~p~~~-~~~----~g~s---~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~g~~~~~~~~~~~ 338 (485)
T TIGR00711 278 LPLYL-QQV----LGYT---ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTIGLILYAVGFYWR 338 (485)
T ss_pred HHHHH-HHh----cCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHHHHHHHHHHHHHH
Confidence 11111 110 0100 11223444455566777777777665554444 23566777777666655
Q ss_pred HHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHH
Q 007932 423 YAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNS 502 (584)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~ 502 (584)
.... ....+.+......++.|++.+...++......+..|++.+|.+.|+.++.+.+|+.+|+
T Consensus 339 ~~~~-----------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 339 AFTF-----------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred hccC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4220 01123344555677888998888877777777889999999999999999999999999
Q ss_pred HHHHHhhh
Q 007932 503 FLVTLVDK 510 (584)
Q Consensus 503 ~l~~~i~~ 510 (584)
.+.+.+.+
T Consensus 402 ~i~g~~~~ 409 (485)
T TIGR00711 402 ALITTILT 409 (485)
T ss_pred HHHHHHHH
Confidence 99887754
No 46
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=3.1e-21 Score=206.27 Aligned_cols=167 Identities=18% Similarity=0.146 Sum_probs=144.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
.+++.+....+..+...+..+.. .+...++.+++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34455666666666666666655 4444567789999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+++.++++++ .+.+.++++|++.|++.|...+....++.|.+|++ +|+++.++
T Consensus 93 ~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~~~ 146 (426)
T PRK12307 93 YSVGTGLSGLA--------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKASAF 146 (426)
T ss_pred HHHHHHHHHHH--------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhhhH
Confidence 99999888877 45778999999999999999999999999999988 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAG 219 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~ 219 (584)
+..+.++|..+++.+.+.+.+..+||+.|++..+.
T Consensus 147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999998889999999875443
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=2.1e-21 Score=204.61 Aligned_cols=175 Identities=14% Similarity=0.176 Sum_probs=142.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
.|+.+...+...+...+..+.. ....+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 3344444444444444444433 4445566778999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.+++... ++.+.+++.|++.|++.+...+...+++.|.+|++ +|++++++.
T Consensus 93 ~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~ 146 (398)
T TIGR00895 93 SVFTLLCALA--------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAVGLM 146 (398)
T ss_pred HHHHHHHHHc--------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhHhhH
Confidence 8888777765 45777899999999999999999999999999987 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
....++|..+++.+++++.+..+|++.|++.++..++..+..+
T Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 147 FCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred hhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 9999999999999999999989999999988655444433333
No 48
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.88 E-value=4.3e-21 Score=198.20 Aligned_cols=347 Identities=19% Similarity=0.201 Sum_probs=254.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
+.+....+...++.+...+..+.|. +++|.+..+.+++.+...++..++.++.|+++||+ ||||.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 3455667778888888888887776 46799999999999999999999999999999999 999999999999999988
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++... ++.+.+++.|++.|++.+...+...+++.|.+|++ +|++.+++.+...+
T Consensus 80 ~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 133 (352)
T cd06174 80 LLAFA--------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGFG 133 (352)
T ss_pred HHHHh--------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHHH
Confidence 88876 45778999999999999999999999999999987 59999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCc
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSEL 270 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (584)
+|..++|.+++.+.+..+|++.|++.++..++..+.....+ + . .
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~------~---------------------- 177 (352)
T cd06174 134 LGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------R-L------L---------------------- 177 (352)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------H-H------H----------------------
Confidence 99999999999999988999999988877666555443321 0 0 0
Q ss_pred cccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEe
Q 007932 271 HEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQ 350 (584)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (584)
.. .....+.............+.+. .+
T Consensus 178 --------------------------------------------------~~--~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (352)
T cd06174 178 --------------------------------------------------LL--LALAFFLLSFGYYGLLTYLPLYL-QE 204 (352)
T ss_pred --------------------------------------------------HH--HHHHHHHHHhHHHHHHHHHHHHH-HH
Confidence 00 00000111111111111111111 10
Q ss_pred cccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007932 351 GTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRM 430 (584)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~ 430 (584)
.. ... ....+.+.....++..++.++..++.+|..+|+ ..+.++..+..++.......
T Consensus 205 ~~----~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~~~~~~----- 262 (352)
T cd06174 205 VL----GLS---AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR----------LLLLIGLLLAALGLLLLALA----- 262 (352)
T ss_pred hc----CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------HHHHHHHHHHHHHHHHHHHh-----
Confidence 00 000 122334555566677777777777665555442 04667777777777666554
Q ss_pred hhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 431 HVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
.+.+.......+.+++.....+....++.+..|++.|++.+|+.+....++..+++.+.+.+.+
T Consensus 263 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 263 ----------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred ----------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2345667778889999999999999999999999999999999999999999999999988753
Q ss_pred hhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHH
Q 007932 511 VTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAF 548 (584)
Q Consensus 511 ~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~ 548 (584)
..++...|.+.+++.+++.+..
T Consensus 327 ----------------~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 327 ----------------TGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred ----------------ccCcchHHHHHHHHHHHHHHHh
Confidence 1133455777777776665543
No 49
>PRK09952 shikimate transporter; Provisional
Probab=99.88 E-value=1.2e-20 Score=202.71 Aligned_cols=177 Identities=11% Similarity=0.020 Sum_probs=133.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCchhhhhhHH-----HHHHHHHHHhhhHhHHHhhcccchhHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQL--HEDTVSSVRNV-----NNWSGVVWITPLLGAYIADTYIGRFWT 97 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--~~~~~~~~~~~-----~~~~~~~~~~~~~~G~laD~~~Grk~~ 97 (584)
.++|.+....+..+++.+....+....+.+..+++ +.++. .+++. +...++..++.++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 34566677777888888887766656666666555 66665 34443 234455678888899999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcc
Q 007932 98 FTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNL 177 (584)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (584)
++++.++++++.++++++.+..+.. ......+++.|+++|++.|...+...+++.|.+|++ +
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~ 158 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIG------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN------K 158 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHH------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC------C
Confidence 9999999999999999874211000 001225888999999999999999999999999988 5
Q ss_pred cceeeeeehhHHhHhHHHHhhhhhhhh--------cccchhHHHHHHHHHHH
Q 007932 178 KVSFFNWWMFSSFIGALCATLGLVYIQ--------ENLGWGLGYGIPTAGLL 221 (584)
Q Consensus 178 r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~~~~~~f~~~~~~~~ 221 (584)
|+...+..+.+..+|..++..+..++. +.+|||++|++.++..+
T Consensus 159 rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 159 KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 899888888888888888876666554 25799999998766543
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=9e-21 Score=200.66 Aligned_cols=165 Identities=13% Similarity=0.060 Sum_probs=136.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|..+.+....++..++.......++.. .++++.++.+.+++.+.+.+...++.+++|+++||+ ||||+++++.++.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 445666677777777655554545544 578899999999999999999999999999999999 999999999999988
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.+++.... + .++.|+++|++.+...|...+++.|.+|++ +|++++++...
T Consensus 81 ~~~~~~~~~--------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~~ 131 (393)
T PRK11195 81 GCLLMLFGI--------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWMEG 131 (393)
T ss_pred HHHHHHHHH--------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHH
Confidence 887776652 2 277899999999999999999999999987 69999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~ 224 (584)
..++|..+||.++|++.+. .|+..+.+.+...+++.
T Consensus 132 ~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 132 STIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999884 47777766655444443
No 51
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=8.1e-21 Score=199.74 Aligned_cols=175 Identities=14% Similarity=0.106 Sum_probs=147.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
++.++.+....+....+.....+..| ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34445555555555566555555554 45778999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+++... ++.+.+++.|++.|++.+...+...+++.|.+|++ +|++++++.+
T Consensus 82 ~~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 135 (385)
T TIGR00710 82 LSSLGLALS--------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSILM 135 (385)
T ss_pred HHHHHHHHH--------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHHHH
Confidence 988888776 45778999999999999999999999999999977 5999999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
...++|..+++.+++++.+.++|++.|++.++..++..+..+.
T Consensus 136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999899999999877765555544444
No 52
>TIGR00898 2A0119 cation transport protein.
Probab=99.87 E-value=6.2e-21 Score=208.71 Aligned_cols=148 Identities=11% Similarity=0.143 Sum_probs=128.8
Q ss_pred HhhhhcCCc---hhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 007932 54 YLTSQLHED---TVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGIC 130 (584)
Q Consensus 54 yl~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (584)
.+.++++++ ..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.++++++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~--------------- 177 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS--------------- 177 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---------------
Confidence 456789998 88999999999999999999999999998 99999999999999988888876
Q ss_pred CCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchh
Q 007932 131 SKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWG 210 (584)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 210 (584)
++.+.+++.|++.|++.+...+...+++.|.+|++ +|+.+.++...+..+|.++++.++..+.+ ||
T Consensus 178 -----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr 243 (505)
T TIGR00898 178 -----PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WR 243 (505)
T ss_pred -----ccHHHHHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HH
Confidence 56788999999999999999999999999999988 58999999888999999999888766643 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 007932 211 LGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 211 ~~f~~~~~~~~~~~~~~~~~~ 231 (584)
+.|++.++..++..+..++.+
T Consensus 244 ~~~~~~~i~~~~~~~~~~~~~ 264 (505)
T TIGR00898 244 WLQLAVSLPTFLFFLLSWFVP 264 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 999988877666555554443
No 53
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.87 E-value=6.9e-21 Score=207.82 Aligned_cols=168 Identities=18% Similarity=0.232 Sum_probs=144.2
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
+.+|+.+..+.+..+...+......... .++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 3455666666666666666665554444 566789999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+.+++.+++.+. .+.+.+++.|++.|++.+...+...+++.|.+|++ +|+++++
T Consensus 94 ~~~~~~~~~~~~--------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~ 147 (496)
T PRK03893 94 LFSVGTLACGFA--------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKASG 147 (496)
T ss_pred HHHHHHHHHHHH--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHH
Confidence 999998888876 45778999999999999999999999999999987 5899999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAG 219 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~ 219 (584)
+.....++|..++|.+.+++.+.++||+.|++..+.
T Consensus 148 ~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 148 FLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999875443
No 54
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=2.9e-20 Score=196.80 Aligned_cols=183 Identities=11% Similarity=0.062 Sum_probs=131.5
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHH-HHHHhhhHhHHHhhcccchhHHHH
Q 007932 21 SSKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSG-VVWITPLLGAYIADTYIGRFWTFT 99 (584)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~ 99 (584)
.+.+...+..+.+.+..++..++.....+.++.|+.+++|.|..+.|++.+...+ +..+.++++|+ +||+ ||||.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~ 85 (393)
T PRK15011 8 SSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLI 85 (393)
T ss_pred ccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHH
Confidence 3334445667777888999999999899999999999999999999999776655 55556655666 9999 9998755
Q ss_pred -HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccc
Q 007932 100 -LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLK 178 (584)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r 178 (584)
.+.++.+++..+++++ .+.+.+++.+.+.+...+...|....+..|..+++++ ..
T Consensus 86 ~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 141 (393)
T PRK15011 86 VFCCLLGVLACTLFAWN--------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGR----EA 141 (393)
T ss_pred HHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccc----hH
Confidence 4455555665555554 3455555555544444456677777877776654420 11
Q ss_pred ceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 179 VSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 179 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+...++.+.+.++|..+||.+++++.+++|||..|++.++..++..+..+.
T Consensus 142 ~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 142 VMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 234467788899999999999999999899999999887765555544444
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=4.1e-21 Score=200.86 Aligned_cols=151 Identities=13% Similarity=0.144 Sum_probs=133.0
Q ss_pred HHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 007932 51 LVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGIC 130 (584)
Q Consensus 51 ~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (584)
..+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 34577889999999999999999999999999999999999 99999999999999999888876
Q ss_pred CCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHh-hhhhhhhcccch
Q 007932 131 SKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCAT-LGLVYIQENLGW 209 (584)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~ 209 (584)
.+.+.+++.|++.|++.+...+...+++.|.+|++ +|++++++.+.+.++|..+++ .+++.+.+..+|
T Consensus 81 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 81 -----TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred -----hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 45778999999999999999999999999999987 599999999999999999999 577777777899
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 007932 210 GLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 210 ~~~f~~~~~~~~~~~~~~~ 228 (584)
++.|++.++..++..+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 9999887766555444433
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=2.1e-20 Score=197.11 Aligned_cols=156 Identities=14% Similarity=0.094 Sum_probs=138.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
.|.++.+.+..++...+...+.+.+|.|.+ ++|.|..+.|++.+.+.++..+++++.|+++||+ ||||++.++.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 466888888899999988888899888876 6799999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++..+++.+ ++.+.++++|+++|++.+...+...+.+.+..+++ +|++++++++
T Consensus 83 ~~~~~~~~~--------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 136 (381)
T PRK03633 83 AGCAGLGLM--------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAAYM 136 (381)
T ss_pred HHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHH
Confidence 998888776 45778999999999999998888888788888776 5899999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchh
Q 007932 187 FSSFIGALCATLGLVYIQENLGWG 210 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~ 210 (584)
.+.++|..+||.+++.+.+...+.
T Consensus 137 ~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 137 MVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHhcccccccch
Confidence 999999999999999987754333
No 57
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=8.5e-22 Score=200.90 Aligned_cols=183 Identities=13% Similarity=0.099 Sum_probs=164.0
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHH
Q 007932 23 KTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSS 102 (584)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 102 (584)
.+..++.+.+++.+++.+++.-|.+-... .-.++.+|+++.+.|++...+.++..+++|+.|+|+||| +||+++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHH
Confidence 34555778888999999999999886644 345788999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
.++.++.+.++++ .++|.+.++|.+.|+|.+...|+++++++|.||+. +|++.+
T Consensus 106 ~iW~~Av~~~~fs--------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~ 159 (493)
T KOG1330|consen 106 FIWTLAVFASGFS--------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVL 159 (493)
T ss_pred HHHHHHHHHHHHH--------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHH
Confidence 9999999999988 46889999999999999999999999999999988 699999
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHHHhCCc
Q 007932 183 NWWMFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFYIGSPI 233 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (584)
+++|+..++|..+|.++++.+....+ |||.|...+++.++..++.+++.++
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 99999999999999999999988776 9999999998877666666665443
No 58
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=1.8e-20 Score=200.29 Aligned_cols=391 Identities=10% Similarity=-0.066 Sum_probs=222.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..|.+....++...+++.+.++++.|+++++|+|+.+.+++.+.+.+...+++++.|+++||+ ||||+++++....++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 5677777788888888888899999999999999999999999999999999999999999999 999999887666555
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHH-HHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIA-FFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
+...+...... .... -...+..+.++..+...+.....+.++.+... ++++..++..+
T Consensus 89 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~ 147 (420)
T PRK09528 89 LFGPFFIYVFA-----------------PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYGRAR 147 (420)
T ss_pred HHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccchhhH
Confidence 44322211000 0000 01112222233333322222222333322111 03677888888
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCC
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDN 266 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (584)
...++|..++|.+++++.+ .+|+.+|++.++..++..+..+...++.+++ ++. + +.+..
T Consensus 148 ~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------~--~~~~~ 206 (420)
T PRK09528 148 MWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKV-----------------A--NALGA 206 (420)
T ss_pred HhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhh-----------------c--cchhc
Confidence 8999999999999999876 5899999887776655554444433221100 000 0 00000
Q ss_pred CCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHH-HHhhhhhhhhccccc
Q 007932 267 PSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIW-LVTLIPSTIWAQINT 345 (584)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 345 (584)
+ ++ . .++.+.... -+++.++...... .....+.....+.+.
T Consensus 207 -------~--~~----------~--~~~~~~~~~-----------------l~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 248 (420)
T PRK09528 207 -------N--AS----------A--VSLKDALAL-----------------LKLPKFWFLVLYVIGVACFYDVFDQQFPN 248 (420)
T ss_pred -------c--cc----------c--ccHHHHHHH-----------------ccCCCeEeehHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 000000000 0001111111111 111111112122222
Q ss_pred eEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007932 346 LFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAV 425 (584)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~ 425 (584)
+..... .+...+ ....+.+..+..+...++.++.+++.+|+.+|+ .+..+.++.+++....+..
T Consensus 249 ~~~~~~--~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~l~~~~~~l~~~~ 312 (420)
T PRK09528 249 FFASFF--ATPEQG---TRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN-----------ALLLAGTIMAVRIIGSGFA 312 (420)
T ss_pred HHHHHH--hccCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-----------hhHHHHHHHHHHHHHHHhc
Confidence 211110 000100 011223444445555566666666655555442 2556666666666555543
Q ss_pred HHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHH-HHHHHhHHHHHHHHH
Q 007932 426 EVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTF-FTSGIGVGNFLNSFL 504 (584)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi-~~~~~~lg~~lg~~l 504 (584)
.+.++++....+.+++.....+....++.+..|++.+++..++ +++...+|+.+++.+
T Consensus 313 ---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~ 371 (420)
T PRK09528 313 ---------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL 371 (420)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH
Confidence 2344556666777888777777778888899999999988765 667788999999988
Q ss_pred HHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhh
Q 007932 505 VTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWAS 552 (584)
Q Consensus 505 ~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~ 552 (584)
.+.+.+.. ++...|.+.+++.++..++.+...
T Consensus 372 ~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 372 AGNLYDSI----------------GFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHhh----------------CchHHHHHHHHHHHHHHHHHHHHh
Confidence 87765422 344567777776666555444433
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.86 E-value=3.3e-20 Score=196.40 Aligned_cols=173 Identities=14% Similarity=0.083 Sum_probs=146.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
+.+|.++.......+..+......+.+|.+ .+++|.|+.+.+++.+.+.++..++.++.|+++||+ ||||+++++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 455777777777777777777666666544 578999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+++... ++.+.+++.|++.|++.+...+....+..|.++++ +++++.++
T Consensus 83 ~~~~~~~~~~~--------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 136 (394)
T PRK11652 83 FILGTLVALFA--------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHANSL 136 (394)
T ss_pred HHHHHHHHHHH--------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHHHH
Confidence 88888887765 45778999999999999887788888888888876 58888889
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLV 225 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~ 225 (584)
.+.+..++..++|.+++++.+..||++.|++.++..++..+
T Consensus 137 ~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 137 LNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 89999999999999999999888999999987765444433
No 60
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=2e-20 Score=198.16 Aligned_cols=189 Identities=12% Similarity=0.002 Sum_probs=137.8
Q ss_pred CCccccCCCc---chhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc
Q 007932 18 PVLSSKTGKW---KACAFLVGYEAFERMAFYGIQSNLVNYLTS-QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG 93 (584)
Q Consensus 18 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G 93 (584)
|..|..+.+. |.++...+......+. +...+.+...+.+ ++|+|..|.+++.+++.++..++.++.|++.||+ |
T Consensus 21 ~~~w~~~~~~~a~r~l~~s~~~f~~~F~~-w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G 98 (462)
T PRK15034 21 PAFWENKGKHIARRNLWISVSCLLLAFCV-WMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-G 98 (462)
T ss_pred hHHHhhcCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 4445555444 5565555554444444 4444444555544 8999999999999999999999999999999999 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChh
Q 007932 94 RFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPY 173 (584)
Q Consensus 94 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~ 173 (584)
.|+++.++.++..+.+++++++.+. ..++.+.+++.|++.|++ |...+.....+++++|++
T Consensus 99 ~R~v~~~~~ll~~i~~~~~~~a~~~---------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~--- 159 (462)
T PRK15034 99 GRRWTVFSTAILIIPCVWLGIAVQN---------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA--- 159 (462)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHcc---------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh---
Confidence 9999999999999998888875210 014578899999999998 778888999999999988
Q ss_pred hhcccceeeeeehhHHhHhHHHHhhhhhhhh-----c-------------ccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 174 ERNLKVSFFNWWMFSSFIGALCATLGLVYIQ-----E-------------NLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 174 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----~-------------~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+|+++.+++....|+|..+++++...+. . ..+|+..+++..+..++..+..++.
T Consensus 160 ---~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 160 ---KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred ---HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6999999997777888876665554432 2 2346666666666555554444443
No 61
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.1e-21 Score=205.51 Aligned_cols=368 Identities=14% Similarity=0.120 Sum_probs=245.1
Q ss_pred hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcch
Q 007932 58 QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQ 137 (584)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (584)
+++++..+.+++.+.+..|..++++++|+++||+ |-|+++.++.++.++++++..++++ .+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------~~ 127 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------IG 127 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH------------------hc
Confidence 5788899999999999999999999999999999 9999999999999999999999874 33
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc-cchhHHHHHH
Q 007932 138 IAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN-LGWGLGYGIP 216 (584)
Q Consensus 138 ~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~f~~~ 216 (584)
.+.+++.|+++|++.|...|+...+.+++.|+.| |+++.++.+.+..+|.+++..++|++.+. .||+++|++.
T Consensus 128 ~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~ 201 (466)
T KOG2532|consen 128 FYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVF 201 (466)
T ss_pred chhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHH
Confidence 4478999999999999999999999999999994 99999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccccccccccccccccCC--Ccchh
Q 007932 217 TAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHS--PAFRC 294 (584)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (584)
+...++..++++....+.+.++|.- +.. + +.-+. .++.+.... .+.
T Consensus 202 g~~g~i~~~~w~~~~~d~P~~h~~i-s~~--E----l~~I~-----------------------~~k~~~~~~~~~~v-- 249 (466)
T KOG2532|consen 202 GIVGLIWFILWFLFYSDSPSKHPNI-SEK--E----LKYIE-----------------------KGKSEAHVKKKPPV-- 249 (466)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCC-CHH--H----HHHHH-----------------------hcccccccCCCCCC--
Confidence 9988887777766554333333221 110 0 00000 000000000 111
Q ss_pred hhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHH-------HhhhhhhhhccccceEEEecccccCCCCCCccc-Cc
Q 007932 295 LDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWL-------VTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRI-PA 366 (584)
Q Consensus 295 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 366 (584)
| .|++++...++. ....++...++.|+++ +..++ +.+ .+
T Consensus 250 -------------P-----------~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~-------~~VL~--f~v~~~ 296 (466)
T KOG2532|consen 250 -------------P-----------YKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYL-------KEVLG--FDVRET 296 (466)
T ss_pred -------------C-----------HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHH-------HHHhC--CChhhh
Confidence 1 123333332222 2333333334444332 22221 222 56
Q ss_pred cccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCc
Q 007932 367 ASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRL--GVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQI 444 (584)
Q Consensus 367 ~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i--~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (584)
+.+.+++.+...+...+.+.+.|++.+| .- ..+..+++ .++....+++++.+++...
T Consensus 297 G~~salP~l~~~~~k~~~g~lsD~l~~~-~l---s~t~~rkifn~i~~~~~ai~l~~l~~~~~----------------- 355 (466)
T KOG2532|consen 297 GFLSALPFLAMAIVKFVAGQLSDRLTFR-IL---SETTVRKIFNTIAFGGPAVFLLVLAFTSD----------------- 355 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC---chHhHHHHHHhHHHHHHHHHHHeeeecCC-----------------
Confidence 6778888888888888888887777665 11 12333444 5555555655655555410
Q ss_pred cceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCC
Q 007932 445 VPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDN 524 (584)
Q Consensus 445 ~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~ 524 (584)
.+. +.....+..+++....+......-....-+++.+..+|+.++...++++++|.+.+.+.. . +
T Consensus 356 --~~~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~-----------~ 420 (466)
T KOG2532|consen 356 --EHR-LLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT-D-----------N 420 (466)
T ss_pred --Ccc-hHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C-----------C
Confidence 011 222222222233333322222222233135889999999999999999999999877642 1 1
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHhhh
Q 007932 525 LNDCHLDYYYGFLMVISILNLGAFFWAS 552 (584)
Q Consensus 525 ~~~~~~~~~f~~~~~~~~~~~l~~~~~~ 552 (584)
+......+|.+.+++.+++.+++.++.
T Consensus 421 -t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 421 -TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred -CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 123445678899988888887776665
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=9.5e-20 Score=193.49 Aligned_cols=171 Identities=12% Similarity=-0.005 Sum_probs=141.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
-..||.+....++.++..++.+....+++.|+ +++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 45667888888888888888888888888887 57899999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+..++.+++..... ...+.+.+++.|++.|++.+...+...+.+.+.+|++ +|+++++
T Consensus 87 ~~~~~~~~~~~~~~----------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~g 144 (402)
T TIGR00897 87 LWCVGHAAFIVFGL----------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAVG 144 (402)
T ss_pred HHHHHHHHHHHHhc----------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHHH
Confidence 88888765533210 0134677888999999998887777788888998877 5999999
Q ss_pred eehhHHhHhH-HHHhhhhhhhhcccchhHHHHHHHH
Q 007932 184 WWMFSSFIGA-LCATLGLVYIQENLGWGLGYGIPTA 218 (584)
Q Consensus 184 ~~~~~~~~g~-~~g~~~~~~l~~~~~~~~~f~~~~~ 218 (584)
+.+.+.++|. .++|.+++++.+.+||+..++....
T Consensus 145 ~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 145 WFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999996 5889999999888887665554433
No 63
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.86 E-value=9.2e-20 Score=194.22 Aligned_cols=148 Identities=11% Similarity=0.101 Sum_probs=130.8
Q ss_pred hhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCC
Q 007932 55 LTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTS 134 (584)
Q Consensus 55 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (584)
+.+++|.+..+.++..+.+.++..+++++.|+++||+ |||++++.+.++..++.+++..+
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------- 101 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------- 101 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc-------------------
Confidence 5678999999999999999999999999999999999 99999999999999998888876
Q ss_pred cchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHH
Q 007932 135 TSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYG 214 (584)
Q Consensus 135 ~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~ 214 (584)
++.+.++++|+++|++.+...+....++.|.+|++ ++++.+++.....++|..+||.+++.+.+..|||+.|+
T Consensus 102 -~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~ 174 (413)
T PRK15403 102 -TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFA 174 (413)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 45778999999999998876677778888999987 58899999999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHH
Q 007932 215 IPTAGLLFSLVIFYI 229 (584)
Q Consensus 215 ~~~~~~~~~~~~~~~ 229 (584)
+.++..+++.+..+.
T Consensus 175 ~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 175 IIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888776666554333
No 64
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=1.1e-19 Score=196.97 Aligned_cols=358 Identities=15% Similarity=0.110 Sum_probs=234.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|....+.......+++.......++-++. ++.-|+...+++.....+-..+..+++|.++||+ .|||+++.+-++.++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 33444555555666665555454554444 5567889999999999999999999999999999 999999999888777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
..+.+++..... ..+.+.+++..++.|++.+...|+.++++.|++|++ +...+.++.+.
T Consensus 88 ~~~~L~~l~~~~---------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~------~L~~A~al~s~ 146 (524)
T PF05977_consen 88 VALLLAVLAFFG---------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE------DLPAANALNSI 146 (524)
T ss_pred HHHHHHHHHHhC---------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh------hHHHHHHHHHH
Confidence 665555443222 246788899999999999999999999999999987 58899999999
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCC
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNP 267 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (584)
..|+...+||.++|.+....|-.+.|.+.++..++...++...++..+ ++. .+..+..+.+..
T Consensus 147 ~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~-~~~e~~~~~l~~------------- 209 (524)
T PF05977_consen 147 SFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSS-LPRERFFSALRE------------- 209 (524)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccc-cchhhhhhhHHH-------------
Confidence 999999999999999998889899999998887766555444332211 111 110000000000
Q ss_pred CCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHH-HHHHHHHHHhhhhhhhhccccce
Q 007932 268 SELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLV-LGMALIWLVTLIPSTIWAQINTL 346 (584)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
..++... ....+.+ .+...+ ..........+ .+
T Consensus 210 -----------------------G~ryv~~-------------------~~~l~~~l~~~~~~---~l~~~a~~aLl-Pl 243 (524)
T PF05977_consen 210 -----------------------GLRYVRS-------------------SPPLRSVLLRSFLF---NLFASAVWALL-PL 243 (524)
T ss_pred -----------------------HHHHHhc-------------------chHHHHHHHHHHHH---HHhhhHHHHhh-hH
Confidence 0011000 0001111 111111 11111111111 11
Q ss_pred EEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 007932 347 FVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVE 426 (584)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~ 426 (584)
+..+ .++ .-....+.+.....++.++++.+..++ .+|. +..+.+..+.++.+++++.+++.
T Consensus 244 ~a~~------~l~-~~a~~yGll~a~~gvGai~Gal~~~~l----~~~~-------~~~~lv~~~~~~~a~~~~~lal~- 304 (524)
T PF05977_consen 244 FARD------VLG-GGASGYGLLLAAFGVGAILGALLLPRL----RRRL-------SSRRLVLLASLLFALALLLLALS- 304 (524)
T ss_pred HHHH------HhC-CcHHHHHHHHHHHHHHHHHHHHHHHHh----hccc-------CcchhhHHHHHHHHHHHHHHhcc-
Confidence 1111 111 001223345555566666666554433 3332 22344566777777777666654
Q ss_pred HhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHH
Q 007932 427 VRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVT 506 (584)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~ 506 (584)
.+.+..++.+++.|++....++..++.+.+.+|+++||++.+++++....+..+|..+.+
T Consensus 305 --------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G 364 (524)
T PF05977_consen 305 --------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWG 364 (524)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 244556667788899999999999999999999999999999999999999999999988
Q ss_pred Hhhh
Q 007932 507 LVDK 510 (584)
Q Consensus 507 ~i~~ 510 (584)
.+.+
T Consensus 365 ~la~ 368 (524)
T PF05977_consen 365 FLAD 368 (524)
T ss_pred HHHH
Confidence 8764
No 65
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=5.7e-20 Score=197.25 Aligned_cols=173 Identities=13% Similarity=0.088 Sum_probs=128.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHH-HHHH-----HHHHHhhhHhHHHhhcccchhHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNV-NNWS-----GVVWITPLLGAYIADTYIGRFWTFT 99 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~-~~~~-----~~~~~~~~~~G~laD~~~Grk~~~~ 99 (584)
+++....+++..+++.+....+.. ..+.+.++++.++.+.+... +... ++..+++++.|+++||+ ||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGF-YATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 345556666677777777666544 44577888998877654432 2222 22246788999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
++.+++.++.++++++.+...+. ......++++|+++|++.|...+....+++|++|++ +|+
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~rg 152 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIG------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG------RKG 152 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHH------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc------cch
Confidence 99999999999998873211000 000124789999999999999999999999999988 599
Q ss_pred eeeeeehhHHhHhHHHHhhhhhhhh--------cccchhHHHHHHHH
Q 007932 180 SFFNWWMFSSFIGALCATLGLVYIQ--------ENLGWGLGYGIPTA 218 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~~~~~~f~~~~~ 218 (584)
++.++.....++|..+++.+++.+. +.+|||++|++..+
T Consensus 153 ~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 153 FYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999998888888888877777652 46899999987543
No 66
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2e-20 Score=197.34 Aligned_cols=402 Identities=13% Similarity=0.070 Sum_probs=244.5
Q ss_pred hhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHH
Q 007932 66 SVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSL 145 (584)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (584)
-+.+++++.+|..+++.++|+++||+ |||..+++..++..++.+++..+... +...+++++|
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-----------------~~~e~li~GR 123 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-----------------PSFEMLILGR 123 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-----------------hhHHHHHHHH
Confidence 45678889999999999999999999 99999999999888888777776432 5588999999
Q ss_pred HHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhh-h-hcccchhHHHHHHHHHHHHH
Q 007932 146 YIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVY-I-QENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 146 ~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-l-~~~~~~~~~f~~~~~~~~~~ 223 (584)
++.|+..|......+.++.|..|++ .||........+..+|..++..++.. + .....|.+.+.+..+..++.
T Consensus 124 ~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 124 LIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 69999999999999999999555432 3 34456998888888877777
Q ss_pred HHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCcccc-ccccccccccccccCCCcchhhhHHHHhc
Q 007932 224 LVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEF-DTQDYIRSGKRQVVHSPAFRCLDKAAIKH 302 (584)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 302 (584)
++...+.++..+.---+. .+..+..+.+ .-++.+ ++.+...|. .++.+. .+ ..+.+..++.+.
T Consensus 198 l~~l~~~PESPk~Ll~~k-~~~~~A~~sl-~~y~G~-----~~~~~~~e~~~~e~~~-~~---~~~~~~~sl~~~----- 261 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIKK-GDEEEARKAL-KFYRGK-----EDVEAEIEEMLREIEE-EE---LEKKKQISLRQL----- 261 (485)
T ss_pred HHHHhcCCCCcchHHHHc-CCHHHHHHHH-HHHhCC-----CcchhHHHHHHHHHHH-hc---cccccCCcHHHH-----
Confidence 777666654333211100 1111111111 111111 111111110 000000 00 000111111111
Q ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEecccccCCCCCCccc-CccccccchhhHHHHHh
Q 007932 303 GNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRI-PAASLGSFVTLSMLLSV 381 (584)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~~~~~~ 381 (584)
++ ....|+.+... ..+.+...+...+..+.+.... .... ++.. ...+.........++..
T Consensus 262 ---------~~---~~~lR~~~~i~----~~v~~~qq~sGi~ai~~Yst~i-~~~a--G~~~~~a~~an~~~g~v~~~~t 322 (485)
T KOG0569|consen 262 ---------LK---NPTLRRPLLIG----IVVSFAQQFSGINAIFFYSTSI-FKTA--GFTPEEAQYANLGIGIVNLLST 322 (485)
T ss_pred ---------hc---CcchhHHHHHH----HHHHHHHHhcCcceeHHHHHHH-HHHc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 00 01112211111 1111111222222211111111 1111 1111 12233333445555555
Q ss_pred hccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehh--hHHHHHHH
Q 007932 382 PMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFW--LLPQYVLL 459 (584)
Q Consensus 382 ~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--li~~~~l~ 459 (584)
....++++|++||. .+.+++.++.++..++......... . .+|.+ .+...+++
T Consensus 323 ~~~~~lid~~gRRp-----------Lll~~~~~~~~~~~~~~~~~~l~~~-------------~-~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 323 LVSPFLIDRLGRRP-----------LLLISLSLMAVALLLMSIALFLSNS-------------F-GSWLSYLCIAAIFLF 377 (485)
T ss_pred HHHHHHHHhcCCcH-----------HHHHHHHHHHHHHHHHHHHHHHHHH-------------h-hhHHHHHHHHHHHHH
Confidence 66666777778773 3666777776666655544321100 0 01222 23344444
Q ss_pred HHHHH-HHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHH
Q 007932 460 GVADV-FNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLM 538 (584)
Q Consensus 460 g~~~~-~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~ 538 (584)
.+++. +..|..+-+..|.+|++.|+.++++..+++++.+++-....+.+.+..+ .++|..+.
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~~filF~ 440 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PYVFILFV 440 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chhhHHHH
Confidence 44444 4588889999999999999999999999999999999999999875432 15688888
Q ss_pred HHHHHHHHHHHhhhhccccccccccccccc
Q 007932 539 VISILNLGAFFWASSRYVYKRETKEVNEGC 568 (584)
Q Consensus 539 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 568 (584)
+.+++..+..+...|++|+|...+..++.+
T Consensus 441 i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 888888888899999999887666655544
No 67
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.85 E-value=3.9e-20 Score=198.77 Aligned_cols=155 Identities=12% Similarity=0.074 Sum_probs=127.3
Q ss_pred HHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 007932 51 LVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGIC 130 (584)
Q Consensus 51 ~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (584)
..+++++ .|+++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.+++.+++....+.
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 3456665 599999999999999999999999999999999 99999999998888887776654210
Q ss_pred CCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhh-hcccch
Q 007932 131 SKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYI-QENLGW 209 (584)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-~~~~~~ 209 (584)
..+...+.+.|++.|++.|...+.....+.|.+|++ +|++++++++...++|+.+++.+.+.. ....+|
T Consensus 115 ----~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 115 ----TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS------ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred ----cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc------cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 134566788899999999999898899999999988 599999999999999999998877754 445789
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 007932 210 GLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 210 ~~~f~~~~~~~~~~~~~~~~ 229 (584)
|+.|++.++..++..+..+.
T Consensus 185 ~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999888776555444443
No 68
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=2e-19 Score=190.86 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=128.4
Q ss_pred hhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCC
Q 007932 55 LTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTS 134 (584)
Q Consensus 55 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (584)
+++++|.++.+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~------------------- 91 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV------------------- 91 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 5678999999999999999999999999999999999 99999999999888888887775
Q ss_pred cchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHH
Q 007932 135 TSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYG 214 (584)
Q Consensus 135 ~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~ 214 (584)
.+.+.+++.|+++|++.+...+...+++.|.+|++ ++++.++......++|..++|.+++++.+.++|++.|+
T Consensus 92 -~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~ 164 (401)
T PRK11043 92 -ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFA 164 (401)
T ss_pred -cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Confidence 45777899999999998887788888999999877 57778888888889999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHH
Q 007932 215 IPTAGLLFSLVIFYI 229 (584)
Q Consensus 215 ~~~~~~~~~~~~~~~ 229 (584)
+.++..++..+..+.
T Consensus 165 ~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 165 TLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887765555544433
No 69
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.84 E-value=3.9e-19 Score=188.00 Aligned_cols=170 Identities=14% Similarity=0.101 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
.......+....+.....+.+|. +.+++|.+..+.++..+.+.++..+++++.|+++||+ ||||.++++.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHH
Confidence 34444555555555555555554 4678999999999999999999999999999999999 999999999999999888
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++..+ ++.+.+++.|+++|++.+...+...+++.|.+|++ +|+++.++.+...+
T Consensus 84 ~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~ 137 (392)
T PRK10473 84 LCSLA--------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGITC 137 (392)
T ss_pred HHHHh--------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHH
Confidence 87765 44667889999999999998899999999999987 59999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+|..++|.+++.+.+..+|++.|++.++..++..+..+
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999999888776555544433
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.84 E-value=2e-19 Score=188.96 Aligned_cols=159 Identities=13% Similarity=0.127 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007932 43 AFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMK 122 (584)
Q Consensus 43 ~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (584)
+...+.+.+|.+. +++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+++...
T Consensus 6 ~~~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~------- 76 (377)
T PRK11102 6 AIDMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA------- 76 (377)
T ss_pred HHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH-------
Confidence 3445567777665 57899999999999999999999999999999999 99999999999999998888876
Q ss_pred CCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhh
Q 007932 123 PTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVY 202 (584)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 202 (584)
++.+.+.+.|++.|++.+...+...+++.|.+|++ +|++++++.+...++|..++|.++++
T Consensus 77 -------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~ 137 (377)
T PRK11102 77 -------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGW 137 (377)
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999877 59999999999999999999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 203 IQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 203 l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+.+..+|++.|++.++..++..+....
T Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 138 LLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999899999998877765555444433
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.84 E-value=1.3e-18 Score=183.57 Aligned_cols=342 Identities=11% Similarity=0.000 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHH----HHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTF----TLSSLIYV 106 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~----~~~~~~~~ 106 (584)
+.+....+....++-...+++|.|++ ++|+|..+.+++.+.+.+...+++++.|.++||+ ||++.. .++..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 44555566666666667788888985 6899999999999999999999999999999999 985433 22222211
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
+ .++..+ ++.+.+++.|++++.+.+...|...++..+. ++ +|++.++...
T Consensus 85 ~--~~~~~~--------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~------~~~~~~g~~~ 134 (382)
T TIGR00902 85 A--AFSAGA--------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QK------QFGLDYGKVR 134 (382)
T ss_pred H--HHHHhh--------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HH------HcCCCccHHH
Confidence 1 122222 4577888999999999888888888876543 23 5899999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCC
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDN 266 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (584)
...++|..++|.+++++.+.+|||..|++.++...+.. +.+...++. +|++ ++ +++
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~-~~-------------------~~~ 190 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTI---PPKD-AI-------------------PED 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCC---CCCc-cc-------------------ccc
Confidence 99999999999999999999999999887655433222 222222210 1111 00 000
Q ss_pred CCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHH-HHHHhhhhhhhhccccc
Q 007932 267 PSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMAL-IWLVTLIPSTIWAQINT 345 (584)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 345 (584)
+ . .+..++.+ ..++|+++.... .++........+...+.
T Consensus 191 ---------~--~---------~~~~~~~~--------------------~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 191 ---------E--S---------QGDSAFIA--------------------LLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred ---------c--c---------ccchhHHH--------------------HHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000000 001122322221 12222222222222221
Q ss_pred eEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007932 346 LFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAV 425 (584)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~ 425 (584)
+.. +.... ....+.+..+..+..++...+.+++ .+|. +..+.+.++.++.++..+.....
T Consensus 231 -~l~-----~~g~s---~~~~g~l~~~~~~~~i~~~~~~~~l----~~r~-------g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 231 -YWQ-----AAGIS---ASATGLLWGIGVLAEIIIFAFSNKL----FQNC-------SARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred -HHH-----HCCCC---HhHHHHHHHHHHHHHHHHHHHhHHH----HhhC-------CHHHHHHHHHHHHHHHHHHHHhH
Confidence 111 11111 1112233334455555555554444 4443 34455778888888887766554
Q ss_pred HHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH-HHHhHHHHHHHHH
Q 007932 426 EVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT-SGIGVGNFLNSFL 504 (584)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~-~~~~lg~~lg~~l 504 (584)
.+++.++....+.++.++...+....++.+. |++.|++++++++ ....+|..+++.+
T Consensus 291 ---------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 291 ---------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2445566677999999999999999999887 9999999999986 5677899999999
Q ss_pred HHHhhh
Q 007932 505 VTLVDK 510 (584)
Q Consensus 505 ~~~i~~ 510 (584)
.+.+.+
T Consensus 349 ~G~l~~ 354 (382)
T TIGR00902 349 AGFIYP 354 (382)
T ss_pred HHHHHH
Confidence 887763
No 72
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=5e-19 Score=189.82 Aligned_cols=356 Identities=15% Similarity=0.147 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc---cchhH-HHHHHHHHHHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY---IGRFW-TFTLSSLIYVLGMILL 112 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~-~~~~~~~~~~~~~~~~ 112 (584)
.+..++....+.++++.|+++++|+++.++|++.+...+...+..|+.|+++||. .|||| .++++.+..+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4455666677778899999999999999999999999999999999999999983 28755 5667777777777777
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
....+.. .......+.+.+++.+++.+.......++..|..++++ +|++..++.+...++|
T Consensus 88 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~g 148 (437)
T TIGR00792 88 FTTPDFS--------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATLG 148 (437)
T ss_pred HhCCCCC--------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHHH
Confidence 6542110 01234566777788888888888888888899886543 6899999998888898
Q ss_pred HHHHhhhhhhhh-------cccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCC
Q 007932 193 ALCATLGLVYIQ-------ENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPD 265 (584)
Q Consensus 193 ~~~g~~~~~~l~-------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (584)
..+++.+.+.+. +..+|++.+.+.++..++..++.+...++.+++.+++ . +.
T Consensus 149 ~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-~--------------------~~ 207 (437)
T TIGR00792 149 GLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-I--------------------EK 207 (437)
T ss_pred HHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-c--------------------cc
Confidence 887766655554 2458999888777765555444333222111000000 0 00
Q ss_pred CCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccc
Q 007932 266 NPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINT 345 (584)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (584)
..++.+..+. ..+.|.++......+..............
T Consensus 208 -------------------------~~~~~~~~~~----------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T TIGR00792 208 -------------------------KLSLKQIFKA----------------LFKNDQLLILCLAYLFYNLAFNIKNGVQV 246 (437)
T ss_pred -------------------------CCCHHHHHHH----------------HhCCHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 0000000000 00112222222221111111111122222
Q ss_pred eEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007932 346 LFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAV 425 (584)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~ 425 (584)
++.....+ . ....+.+..+..++.+++.++..++.+|+++| +.+.++.++.+++.+.....
T Consensus 247 ~~~~~~~~---~-----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 247 YYFTYVLG---D-----PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----------ILFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred eeEeeecC---C-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHc
Confidence 22221111 0 11112333444566666677666665554443 33566666666665544332
Q ss_pred HHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCC-------chhHHHHHHHHHHHHhHHH
Q 007932 426 EVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSP-------EDMQSLGTTFFTSGIGVGN 498 (584)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~gi~~~~~~lg~ 498 (584)
. .+.+..+...++.+++.+..++..++++.|.+| ++.+|.+.|+.++...+|.
T Consensus 308 ~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 308 G--------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred c--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 1 122334455667788888888888888877765 5678999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 007932 499 FLNSFLVTLVDKVT 512 (584)
Q Consensus 499 ~lg~~l~~~i~~~~ 512 (584)
.+++.+.+.+.+..
T Consensus 368 ~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 368 ALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999887654
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=9.1e-19 Score=187.81 Aligned_cols=158 Identities=15% Similarity=0.038 Sum_probs=126.7
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
..++....++.+....+...+.........| .+++++|.|+.+.++..+.+.++..+++++.|++.||+ ||||++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g 97 (438)
T PRK10133 20 QSRSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITG 97 (438)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHH
Confidence 3344555666666666666666555555555 45899999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.++++++.+++..... .++.+.++++|+++|+|.|...+..++++.|..|++ +|...
T Consensus 98 ~~~~~~~~~l~~~~~~-----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~------~~~~~ 154 (438)
T PRK10133 98 LFLYALGAALFWPAAE-----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES------SGHFR 154 (438)
T ss_pred HHHHHHHHHHHHHHHh-----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh------hHHHH
Confidence 9999999987642210 156788999999999999999999999999875554 45556
Q ss_pred eeeehhHHhHhHHHHhhhhhhhh
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQ 204 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~ 204 (584)
++..+....+|..+|+.+++.+.
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888999999998876543
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=8.4e-19 Score=185.80 Aligned_cols=180 Identities=5% Similarity=-0.134 Sum_probs=135.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.+|.+....++...+...+.++++.|+++++|.++.+.+++.+.+.++..+++++.|+++||+ ||||.++.+.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567788888888998889999999999999999999999999999999999999999999999 999999887766655
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+...+......+.. .......+.+.+++.|++.+...+....+..|..+ +++..++....
T Consensus 81 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~ 140 (396)
T TIGR00882 81 LFAPFFIYVFGPLL------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--------NSNFEYGKARM 140 (396)
T ss_pred HHHHHHHHHhhhHH------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--------hcccccchhhh
Confidence 44332211000000 00123345667788888888888887777666422 24556778888
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
..++|..+||.+++.+.+ .+|+.+|++.+...++..++.+.
T Consensus 141 ~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 141 FGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred hcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHH
Confidence 889999999999998865 69999999887765555544433
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.83 E-value=8.4e-20 Score=190.86 Aligned_cols=164 Identities=15% Similarity=0.113 Sum_probs=136.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
..+....+.+......+...+.+|.|+++++|+|..+.+++.+.+.++..+++++.|+++||+ |||++++++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456666777777777777778777788999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhH
Q 007932 109 MILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFS 188 (584)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (584)
.+++.++. .+.+.+++.|+++|++.+. .+...++++|.+|++ +|+++.++....
T Consensus 81 ~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~------~r~~~~~~~~~~ 134 (366)
T TIGR00886 81 CLWAGLAV-------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKK------IQGTALGLAAGW 134 (366)
T ss_pred HHHHHHHh-------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHh------hhhHHHHHHHHH
Confidence 98888762 1577899999999998665 456788999999987 599999999988
Q ss_pred HhHhHHHHhhhhhhhhc----------ccchhHHHHH-HHHH
Q 007932 189 SFIGALCATLGLVYIQE----------NLGWGLGYGI-PTAG 219 (584)
Q Consensus 189 ~~~g~~~g~~~~~~l~~----------~~~~~~~f~~-~~~~ 219 (584)
.++|..+++.+++.+.. ..+||+.|++ .++.
T Consensus 135 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 135 GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 88888888887776654 3489999843 3443
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=1.2e-18 Score=176.85 Aligned_cols=392 Identities=14% Similarity=0.042 Sum_probs=266.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
+..+|+++....+ +...+..+.+.+.+.+++++++|+|+.|.+++..+..+...+..++.|.+.||+ |.|++.+++.+
T Consensus 10 ~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 4455666655544 444444455667777888899999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+..+-.+..+++.+ .++.+.+++.+.+.|++. +..+...+.+++.||++ ++|.+.+
T Consensus 88 l~~IP~~~~~~a~~-----------------~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~------~qG~AlG 143 (417)
T COG2223 88 LLLIPCLGLAFAVT-----------------YPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKE------KQGLALG 143 (417)
T ss_pred HHHHHHHHHHHHcc-----------------CCchHHHHHHHHHHhccc-ceehcccccccccCChh------hhhHHHH
Confidence 99999888888853 233478999999999884 45678888999999998 6999999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccc---hhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhcc
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLG---WGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRK 260 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (584)
++. ..|+|..+...+++++....+ |+....+..+..+++.+..++..++.+.+++.. .+..
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-~~~~-------------- 207 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-KPQL-------------- 207 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-cccc--------------
Confidence 999 999999999999999999888 998888887777776666666544332221111 0000
Q ss_pred ccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhh
Q 007932 261 IQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIW 340 (584)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (584)
+ + + + +.+..+++.+.+..+...+...++.+
T Consensus 208 ---~-------~--------------------~-~-------------------~~v~~~~~~W~lsllY~~tFG~Fvgf 237 (417)
T COG2223 208 ---P-------A--------------------Q-L-------------------KAVFSNKDTWLLSLLYFATFGGFVGF 237 (417)
T ss_pred ---h-------h--------------------H-H-------------------HHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0 00111233444433333333333333
Q ss_pred ccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 007932 341 AQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIA 420 (584)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~ 420 (584)
....+.+.......+ ....+.+.....+...+.-|..+++.||++.++ ...+.+..++++..
T Consensus 238 s~~l~~~~~~~fg~~-------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r-----------v~~~~f~~~~~~~~ 299 (417)
T COG2223 238 SAYLPMYLVTQFGLS-------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR-----------VTLAVFVGMALAAA 299 (417)
T ss_pred HHHHHHHHHHhcCCC-------hhhHHHHHHHHHHHHHHHHhccchhhhhccchh-----------HHHHHHHHHHHHHH
Confidence 322222221111111 223346666777888888999999988887663 25566666666666
Q ss_pred HHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHH
Q 007932 421 IAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFL 500 (584)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~l 500 (584)
+....... +..+.+....+..++..++..++-+-..+-++....|+ +-|.+.|+....+++|++.
T Consensus 300 ~l~~~~~~--------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~ 364 (417)
T COG2223 300 LLSLFLTG--------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFF 364 (417)
T ss_pred HHHccccc--------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccc
Confidence 55543100 01113344445555666666777777777777777764 6788888888888898888
Q ss_pred HHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 007932 501 NSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 501 g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
-|...+...+.+ +.+...|+++..+.+++.+..+..+.|.
T Consensus 365 lp~~~g~~~~~t---------------g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 365 LPLAFGVSLDLT---------------GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred hhHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888877765433 2345678888888888877777666554
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.83 E-value=5e-18 Score=181.06 Aligned_cols=388 Identities=13% Similarity=0.048 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccch-hHHHHHHHHHHHHHHH
Q 007932 32 FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGR-FWTFTLSSLIYVLGMI 110 (584)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-k~~~~~~~~~~~~~~~ 110 (584)
-+.+..++....+-.+.++++.|+++++|++..+.|++.+.+.++..+++++.|+++||+ || |+++.++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 345556666666666779999999999999999999999999999999999999999998 76 7788887777777776
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccC-------CCCChhhhcccceeee
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQF-------DDFNPYERNLKVSFFN 183 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~-------~~~~~~~~~~r~~~~~ 183 (584)
+..+. ++.+.+.+.|++.+++.+...+...+...+.. .+.. .|.+.++
T Consensus 85 ~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~-----~~~r~~G 139 (418)
T TIGR00889 85 FAAQV--------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDF-----PPIRVMG 139 (418)
T ss_pred HHHHh--------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcC-----CCeeeeh
Confidence 66654 34666788888888887776666555432221 1111 2445444
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccC
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQL 263 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (584)
.+|.++||.+++.+.....|. +|++.++..++..++.+.. ++.++ +++ .+..+
T Consensus 140 ------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~-~e~~~--~~~-~~~~~---------------- 192 (418)
T TIGR00889 140 ------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTL-PDIPV--AKS-TAKMS---------------- 192 (418)
T ss_pred ------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcC-CCCCC--Ccc-ccccC----------------
Confidence 478889999888884433344 4555555544444332222 21110 000 00000
Q ss_pred CCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH-HHHhhhhhhhhcc
Q 007932 264 PDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI-WLVTLIPSTIWAQ 342 (584)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 342 (584)
..+ .. ..+... . .+.++++..... ++...........
T Consensus 193 ------~~~------------~~----~~~~~~---~-----------------~k~~~~~~~~~~~~~~~~~~~~~~~~ 230 (418)
T TIGR00889 193 ------IKV------------ML----GLDAFI---L-----------------FKNKRMAIFFFFSMLLGAPLQITNIF 230 (418)
T ss_pred ------HHH------------Hh----hhhHHH---H-----------------hcCCCeeeHHHHHHHHHhHHHHHHHh
Confidence 000 00 000000 0 000111111111 1111111011111
Q ss_pred ccceEEEecccccCCCCCCcc-cCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHH
Q 007932 343 INTLFVKQGTTLNRSLSPSFR-IPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAI 421 (584)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~ 421 (584)
.+.+. .+. +.+....-++. ...+.+..+..+..+++..+.+++.+|+++| +.+.++.++.++++.+
T Consensus 231 ~~~~~-~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~v~~~l 297 (418)
T TIGR00889 231 GNGFL-HEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----------KVMLLSLVAWALRFGF 297 (418)
T ss_pred HHHHH-HHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHH
Confidence 11111 000 00000000000 1123333444445555555555555554444 3466777777666655
Q ss_pred HHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH-HHHhHHHHH
Q 007932 422 AYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT-SGIGVGNFL 500 (584)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~-~~~~lg~~l 500 (584)
..... .....++.++...++.+++++...+....++.+.+|++.|++++|+.+ ....+|..+
T Consensus 298 ~~~~~-----------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 298 FAYGD-----------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHcC-----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 54421 000112334456678888888888888889999999999999999997 667899999
Q ss_pred HHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 007932 501 NSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSR 554 (584)
Q Consensus 501 g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~ 554 (584)
|+.+.+.+.+..+..+. .+++..|.+.+++.+++.+.++++.++
T Consensus 361 Gp~l~G~l~~~~g~~~~----------~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGT----------FDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHHHhccccC----------CchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999887653321110 135567888888777777666666543
No 78
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.5e-18 Score=190.02 Aligned_cols=405 Identities=14% Similarity=0.102 Sum_probs=236.6
Q ss_pred hhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHH
Q 007932 65 SSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSS 144 (584)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (584)
+.+++.+.+.++..+++++.|+++|++ |||++++++.+++.+|.++++.+ ++..+++++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a--------------------~~~~~l~~G 148 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA--------------------PSWYQLIVG 148 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHHH
Confidence 448999999999999999999999999 99999999999999999999998 568899999
Q ss_pred HHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc--cchhHHHHHHHHHHHH
Q 007932 145 LYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN--LGWGLGYGIPTAGLLF 222 (584)
Q Consensus 145 ~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~~~~~~f~~~~~~~~~ 222 (584)
|++.|+|.|......+.+++|..|++ .|+...+..+...++|..++. +.+....+ ++||.++.+..+..++
T Consensus 149 R~l~G~g~G~~~~~~piy~sEiap~~------~RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i~~~~ 221 (513)
T KOG0254|consen 149 RILTGLGVGGASVLAPVYISEIAPAH------IRGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALIPAVI 221 (513)
T ss_pred HHHhccchhhhhhcchhhHhhcCChh------hhHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999988 599999999999999999994 44444443 4899888877776555
Q ss_pred HHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhc
Q 007932 223 SLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKH 302 (584)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 302 (584)
..+..++.++..+.....+ +.....+.+. -++.. . +.+.+...+....+. ......+....
T Consensus 222 ~~~~~~~~pesp~~L~~~g--~~~~a~~~l~-~l~g~--~-~~~~~~~~~~~~~~~---~~~~~~~~~~~---------- 282 (513)
T KOG0254|consen 222 LALGMLFLPESPRWLIEKG--RLEEAKRSLK-RLRGL--S-PEDVEVELELLKIKL---LVEAEVAEGKA---------- 282 (513)
T ss_pred HHHHHHhCCCChHHHHHcC--ChHHHHHHHH-HHhCC--C-CcchHHHHHHHHHHH---HHhhhcccccc----------
Confidence 5555444332111111111 1111111111 11110 0 010000000000000 00000000000
Q ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhh
Q 007932 303 GNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVP 382 (584)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ 382 (584)
.++.+.. ...+|+......+..+.. +...+....+....+... +...+......+......++..
T Consensus 283 -----~~~~l~~--~~~~~~~~i~~~l~~fqq-----~tG~~~~~~Y~~~if~~~---g~~~~~~~~~~~~~~v~~~~t~ 347 (513)
T KOG0254|consen 283 -----SWGELFS--PKVRKRLIIGLLLQLFQQ-----LTGINYVFYYSTTIFKSA---GLKSDTFLASIILGVVNFLGTL 347 (513)
T ss_pred -----cHHHhcC--cchHHHHHHHHHHHHHHH-----HhCCceEEeehHHHHHhc---CCCCchHHHHHHHHHHHHHHHH
Confidence 0000000 111222222222222221 122222222222222221 1222212333333444444444
Q ss_pred ccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHH
Q 007932 383 MYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVA 462 (584)
Q Consensus 383 ~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~ 462 (584)
+...++|+++||. .+..|...+.+++++++............ .....+..+....++....
T Consensus 348 ~~~~lvd~~gRr~-----------lll~s~~~m~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~f 408 (513)
T KOG0254|consen 348 VATYLVDRFGRRK-----------LLLFGAAGMSICLVILAVVGVFALYYPNS--------SKGAGWLAIVFLCLFIFSF 408 (513)
T ss_pred HHHHHHHHhccHH-----------HHHHhHHHHHHHHHHHHHHHHHhccCCCc--------ccchhHHHHHHHHHHHHHH
Confidence 4456667766663 47888888888888877764322110000 0112223333333444445
Q ss_pred HHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHH
Q 007932 463 DVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISI 542 (584)
Q Consensus 463 ~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~ 542 (584)
.....+..+.+..|.+|.+.|+.+.++....+++.+++-....+...... +....|..+++++.
T Consensus 409 ~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~----------------~~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 409 AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL----------------GIGGTFGYFGGICL 472 (513)
T ss_pred hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------------cccchHHHHHHHHH
Confidence 55567777788899999999999999999999998888877766654211 01234666666666
Q ss_pred HHHH-HHHhhhhccccccccccccc
Q 007932 543 LNLG-AFFWASSRYVYKRETKEVNE 566 (584)
Q Consensus 543 ~~~l-~~~~~~~~~~~~~~~~~~~~ 566 (584)
+..+ +.+++.+++|+++.++..+.
T Consensus 473 ~~~~~fv~~~~pETkg~sleei~~~ 497 (513)
T KOG0254|consen 473 LSLIIFVFFFVPETKGLTLEEINEL 497 (513)
T ss_pred HHHHHHheEEcccCCCCcHHHHHHH
Confidence 6666 67777888888876555443
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.82 E-value=1.6e-18 Score=208.12 Aligned_cols=155 Identities=9% Similarity=0.023 Sum_probs=123.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCch--hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDT--VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+....++++.++..++..+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 445555566666666555555555556655555543 4468888999999999999999999999 9999999998776
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+++.++..+... ..+.+.++++|+++|++.+...+...+++.|++|++ +|++++++.
T Consensus 88 ~~~~~~~~~~~~-----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~ 144 (1146)
T PRK08633 88 VGLTLLIVLAYY-----------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRANGLL 144 (1146)
T ss_pred HHHHHHHHHHHH-----------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhhhHH
Confidence 666655544321 134788999999999999999999999999999988 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcc
Q 007932 186 MFSSFIGALCATLGLVYIQEN 206 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~ 206 (584)
..+.++|.++|+.+++++.+.
T Consensus 145 ~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 145 EAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998775
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.82 E-value=9.2e-19 Score=209.81 Aligned_cols=369 Identities=9% Similarity=0.001 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCch-hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH--HHHHHHH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDT-VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL--IYVLGMI 110 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~--~~~~~~~ 110 (584)
++..+..++....+.......+++..+.+. ...++..+.+.+...++++++|+++||+ |||+++..... +......
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~ 99 (1140)
T PRK06814 21 FFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALA 99 (1140)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHH
Confidence 333444444444333333323444444433 3467778889999999999999999999 99998644222 2222222
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
+..+.. .+.+.++++|+++|++.+...|+..+++.|++|++ +|++++++.+++.+
T Consensus 100 ~~~~~~-------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ 154 (1140)
T PRK06814 100 IYGFHL-------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTF 154 (1140)
T ss_pred HHHHHH-------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHH
Confidence 222221 45788999999999999999999999999999988 69999999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCc
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSEL 270 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (584)
+|.++||.++|++....+|++.|...++..+++.++.+...+. +...++. .......+
T Consensus 155 ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-------------------- 212 (1140)
T PRK06814 155 IAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT-GNAAPDL-KIDRNIIR-------------------- 212 (1140)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCCC-eeccchHH--------------------
Confidence 9999999999999999999998854444444443333332221 1100000 00000000
Q ss_pred cccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH-HHHhhhhhhhhccccceEEE
Q 007932 271 HEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI-WLVTLIPSTIWAQINTLFVK 349 (584)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 349 (584)
+..+.... ....+.++..... ++....+.....+++.+. .
T Consensus 213 ----------------------~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~ 253 (1140)
T PRK06814 213 ----------------------STITLLKY----------------AKADKRIWLAILGISWFWLVGAVVLSQLPLLA-K 253 (1140)
T ss_pred ----------------------HHHHHHHH----------------HhcCchHHHHHHHHHHHHHHHHHHHHHhHHHH-H
Confidence 00000000 0011122222111 111111222222222221 1
Q ss_pred ecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 007932 350 QGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRR 429 (584)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~ 429 (584)
+ .++ .-....+.+.....++.+++..+.+++.++..++ +.+..+.++.+++.+.+.+.....
T Consensus 254 ~------~~g-~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~ 315 (1140)
T PRK06814 254 E------TLG-GDENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----------LYVPIGALLMGLFGLDLAFASSSV 315 (1140)
T ss_pred H------HcC-CchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----------eeehHHHHHHHHHHHHHHhccccc
Confidence 1 111 0011233455555666677666665553222211 113334444433333222210000
Q ss_pred -hhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 430 -MHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 430 -~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
............ ....+.+.+++..++.|++.+..++...+++.+.+|++.||+++|+.++...++..+++.+.+.+
T Consensus 316 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 316 PAEPAQLKSILVF--LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred ccccccccchhhh--hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 00123455666778889999999999999999999999999999999999999999999988777
Q ss_pred h
Q 007932 509 D 509 (584)
Q Consensus 509 ~ 509 (584)
.
T Consensus 394 ~ 394 (1140)
T PRK06814 394 Q 394 (1140)
T ss_pred H
Confidence 5
No 81
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.81 E-value=6.7e-21 Score=200.10 Aligned_cols=366 Identities=32% Similarity=0.521 Sum_probs=230.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhh
Q 007932 95 FWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYE 174 (584)
Q Consensus 95 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~ 174 (584)
.|+++++.+++.+|.+++.+++..+.. +++.+.+.++++..+.++|.|+.+|+.+++.+|++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~-----------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~--- 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL-----------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD--- 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT---
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh-----------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc---
Confidence 478999999999999998887643331 123456789999999999999999999999999999873
Q ss_pred hcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeec-CCCCCChhhhhHH-HH
Q 007932 175 RNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHK-IRKTKSPARDLIR-VP 252 (584)
Q Consensus 175 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~ 252 (584)
+.+|.+++++++++.|+|+.+++.+.+++.+++||.+.|.++++..+++++.++..++.++++ +|++ ++..+..+ ..
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~-~~~~~~~~~~~ 145 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGG-SPLTNFIKLVL 145 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S------S--S--SHHHH
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCC-cccchhHHHHH
Confidence 127999999999999999999999999999999999999999999999999988888888777 4544 55555333 33
Q ss_pred HHHHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCC-CcccccchhhHHHHHHHHHHH
Q 007932 253 IAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKP-PCTVTQVEGTKLVLGMALIWL 331 (584)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 331 (584)
....+++....+.+.....+.....+ .... .+.............. ...+. .++.++++..+.+.+....+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~ 218 (372)
T PF00854_consen 146 VAAFKKRKLAVPKGSSWLDWALFQYS----ERSI--FGIIVFIRAAVIFFPE-IFFWALFCQVQRVEELKALIRFLPIFL 218 (372)
T ss_dssp HHHHHHHCCCH-HHHHHHHHHHHHHC----CCCC--CCCCCHHHHHHHHCCC-HHHHTTTSSTTTHHHCCHHHCHHHCCC
T ss_pred HHHHHHhhcccccchHHHHHhhhhhh----hhhh--hhhhhhccchhhhhhh-hhhcccCCccceeeeeeeeeeccccCe
Confidence 33334443322211111111000000 0000 0000000000011000 00111 123444555666666666666
Q ss_pred HhhhhhhhhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHH
Q 007932 332 VTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVG 411 (584)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig 411 (584)
..+.++....+.+.+...+...+++...+.+.+++++++.++.+..++..|+.+++++++.++ .+..+...++.+|
T Consensus 219 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~----~~~~~~~~k~~~G 294 (372)
T PF00854_consen 219 FWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR----GIQPSPPQKFGIG 294 (372)
T ss_dssp HHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH
T ss_pred EEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh----cccchhhhhhhHH
Confidence 777777777777777777777776666634889999999999999999999999999998883 2345788999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH
Q 007932 412 FVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT 491 (584)
Q Consensus 412 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~ 491 (584)
+++..+++++...++.++.......+ ..+.+|.++.+++..+++.+..+...+...+.+|++..+..+|+++
T Consensus 295 ~~~~~~~~~~~~~v~~~r~~~~~~~~--------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~ 366 (372)
T PF00854_consen 295 MVFAILAMFVAAIVEIRRLCYAQPCG--------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWF 366 (372)
T ss_dssp -HHHHHHHHTTTHHHH---HH----T--------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcccccC--------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHH
Confidence 99999999888877653332222221 2344788899999999999999988886666666666666666655
Q ss_pred HHH
Q 007932 492 SGI 494 (584)
Q Consensus 492 ~~~ 494 (584)
...
T Consensus 367 ~~~ 369 (372)
T PF00854_consen 367 ALS 369 (372)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=8.5e-18 Score=182.89 Aligned_cols=181 Identities=12% Similarity=0.111 Sum_probs=141.1
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc----cchhHH-
Q 007932 23 KTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY----IGRFWT- 97 (584)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~~- 97 (584)
++..+|+.+.++...+......+.....++.|+++ .|.|..+.+... ..... +++.++.|.++||+ .||||.
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ 83 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGW 83 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHH
Confidence 34556667778888888888888888888888764 599988888763 22222 36889999999995 288885
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcc
Q 007932 98 FTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNL 177 (584)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (584)
++++.+..+++...+++.. | ..+.+.+.+.+++.+++.+...+...++..|++|++ +
T Consensus 84 ll~~~i~~~~~~~~~a~~~--~---------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~------~ 140 (491)
T PRK11010 84 LLATQLLLLVAIAAMGFLE--P---------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE------E 140 (491)
T ss_pred HHHHHHHHHHHHHHHHHcC--C---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------h
Confidence 5566667767766666642 1 145777888899999999998999999999999977 5
Q ss_pred cceeeeeehhHHhHhHHHHhhhhhhhhc-ccchhHHHHHHHHHHHHHHHHHHH
Q 007932 178 KVSFFNWWMFSSFIGALCATLGLVYIQE-NLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 178 r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|+++.++...+.++|..+++.+++++.+ ..|||..|++.++..++..+..+.
T Consensus 141 rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 141 RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988 579999999988766555444433
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.80 E-value=9.8e-18 Score=176.82 Aligned_cols=157 Identities=9% Similarity=-0.090 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchh----HHHHHHHHHHHHHHH
Q 007932 35 GYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRF----WTFTLSSLIYVLGMI 110 (584)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk----~~~~~~~~~~~~~~~ 110 (584)
...++...+...+.+++|.|++ ++|.|..+.|++.+.+.+...+++++.|.++||+ ||+ +.+.++..+. . .
T Consensus 11 ~~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~-~ 85 (382)
T PRK11128 11 LSYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--A-V 85 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--H-H
Confidence 3355555666777888999985 5799999999999999999999999999999999 984 3333222211 1 1
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
.+... .++.+.+++.|++.|++.+...|...++..+. . + +|+++++..+...+
T Consensus 86 ~~~~~-------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~-~------~~~~a~~~~~~~~~ 138 (382)
T PRK11128 86 AFWFG-------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-Q-K------QIGLDYGKVRLWGS 138 (382)
T ss_pred HHHHh-------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH-H-h------hccCCcchHHHHHH
Confidence 12211 14578888999999999998888877777765 2 2 47888999999999
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~ 223 (584)
+|..+||.+++++.+++|||..|++.++..++.
T Consensus 139 lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 139 IAFVIGSALTGKLVSWFGEQAILWILTAGVASM 171 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 999999999999999999999998777654443
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.79 E-value=5.1e-18 Score=178.36 Aligned_cols=165 Identities=14% Similarity=0.129 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHhhhhcC--CchhhhhhHHHH-----HHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 40 ERMAFYGIQSNLVNYLTSQLH--EDTVSSVRNVNN-----WSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILL 112 (584)
Q Consensus 40 ~~~~~~~~~~~~~~yl~~~l~--~~~~~~~~~~~~-----~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~ 112 (584)
+.+..+.+. +...++.++.. .++.+.+.+.+. ..+...+++++.|+++||+ ||||+++++.++..++.+++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 5 EWFDFYLYG-FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred hHHHHHHHH-HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHH
Confidence 344444333 33444444433 444555544433 2233346789999999999 99999999999999998888
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
.++.+.... .......++++|+++|++.+...+..++++.|.+|++ +|++..++.+.+..+|
T Consensus 83 ~~~~~~~~~------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G 144 (394)
T TIGR00883 83 GLLPSYATI------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVG 144 (394)
T ss_pred hhCCChhhh------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc------cchHHHHHHHHHHHHH
Confidence 876421100 0001235889999999999999999999999999987 5999999999999999
Q ss_pred HHHHhhhhhhhh--------cccchhHHHHHHHHHHHHHH
Q 007932 193 ALCATLGLVYIQ--------ENLGWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 193 ~~~g~~~~~~l~--------~~~~~~~~f~~~~~~~~~~~ 224 (584)
..+++.++..+. +.++||+.|.+.++..++..
T Consensus 145 ~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 145 LLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 999988776553 35789999987766554443
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=2.1e-17 Score=175.67 Aligned_cols=172 Identities=15% Similarity=0.114 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
++.++...+...+. +++...+.+.+++++|.+..+.+++.+.+.++..+++++.|++.||+ |||++++++.++++++.
T Consensus 5 ~~~~~~~f~~~G~~-~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFA-NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHH-HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34444444444444 34554455567899999999999999999999999999999999999 99999999999999998
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
+++..+.. ..+.+.+++.|++.|+|.|...+..++++.+..|++ +|++..++.+...
T Consensus 83 ~l~~~~~~-----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 139 (410)
T TIGR00885 83 FLFWPAAE-----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQSFN 139 (410)
T ss_pred HHHHHHHh-----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHHHH
Confidence 77654421 145788999999999999999999999999998877 4788899999999
Q ss_pred hHhHHHHhhhhhhhhcc--------------------------cchhHHHHHHHHHHHHHHHH
Q 007932 190 FIGALCATLGLVYIQEN--------------------------LGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~--------------------------~~~~~~f~~~~~~~~~~~~~ 226 (584)
++|..++|.+++.+... .+||++|.+.++..++..++
T Consensus 140 ~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 140 PFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877422 36999998877765544433
No 86
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=5.9e-18 Score=172.15 Aligned_cols=439 Identities=12% Similarity=0.013 Sum_probs=235.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-------CchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLH-------EDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTL 100 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~-------~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~ 100 (584)
|.+.+.-...+.+....+.+....+.+-.-..| .++...+.+..+..++..+++++.||++||+ |||+++..
T Consensus 41 k~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~ 119 (538)
T KOG0252|consen 41 KAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGK 119 (538)
T ss_pred HHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhH
Confidence 444444444555556655555555543222222 4556778888889999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccce
Q 007932 101 SSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVS 180 (584)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (584)
.++++.+++++++++-..+ + -..-++.+.+.|+++|+|.|+-+|...+..+|....+ +|+.
T Consensus 120 ~liImIi~t~~~~~s~~~~--------~-----~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~------~RGa 180 (538)
T KOG0252|consen 120 ELIIMIICSALSGLSVGTT--------S-----PLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKK------TRGA 180 (538)
T ss_pred HHHHHHHHHHHhccCCCCC--------C-----CcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhc------cccc
Confidence 9999999998666653111 1 1134567899999999999999999999999988776 6887
Q ss_pred eeeeehhHHhHhHHHHhhhhhhhh---c------------ccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChh
Q 007932 181 FFNWWMFSSFIGALCATLGLVYIQ---E------------NLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPA 245 (584)
Q Consensus 181 ~~~~~~~~~~~g~~~g~~~~~~l~---~------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (584)
..+..-.+++.|...|.+++-.+. + ..-||..|.+.++..++.+..-+.+++..+++....
T Consensus 181 ~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~---- 256 (538)
T KOG0252|consen 181 FIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVS---- 256 (538)
T ss_pred eeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhh----
Confidence 777766666666666544443331 1 012898877666543333322222221111110000
Q ss_pred hhhHHHHHHHHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHH
Q 007932 246 RDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLG 325 (584)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (584)
.+. ..+..+.+ .+.+. +.++++......-..++......+ ...+.
T Consensus 257 ---~~~-~~a~~d~~----k~~~~----~~~~~~~~~~~~~~~~~~~~~F~~---------------------~f~~~-- 301 (538)
T KOG0252|consen 257 ---KKL-KQAAGDMK----KVLSV----DIEAESTAESDVPPPSNSFGLFSR---------------------LFLRW-- 301 (538)
T ss_pred ---cCH-hhhhhccc----ccccc----ccchhhccccCCCCcccccchHHH---------------------HHHHH--
Confidence 000 00000000 00000 000000000000000000000000 00000
Q ss_pred HHHHHHHhhhhhhhhc-cccceEEEecccccC-CCCCCcccC-----ccccccchh-hHHHHHhhccccchhhhhhhccC
Q 007932 326 MALIWLVTLIPSTIWA-QINTLFVKQGTTLNR-SLSPSFRIP-----AASLGSFVT-LSMLLSVPMYDRYFVPFMRRRTG 397 (584)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~~~~~~~~~r~~~ 397 (584)
....++.+...|..+. .+++..+.|...++. ...|+-... .+..+.+.. ...+.+..+...++|.++|+.
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~-- 379 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY-- 379 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH--
Confidence 1112222222232221 222333333222210 000000000 011111111 122224445555666666663
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHH-HHHHHHHhhhceeeeec
Q 007932 398 NPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLL-GVADVFNAIGLLEFFYD 476 (584)
Q Consensus 398 ~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~-g~~~~~~~~~~~~~~~~ 476 (584)
.-+.|++++++.+++++..-++ . .+..-.++.+.+. -++....+.+...+.++
T Consensus 380 ---------iq~~GF~~~~i~~~~~~~~y~~----------------~-~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE 433 (538)
T KOG0252|consen 380 ---------IQLMGFFIMTIFFFVIAGPYNQ----------------L-ENTIGFVVLYSLTFFFGNFGPNATTFIVPAE 433 (538)
T ss_pred ---------HHHhhHHHHHHHHHHHcCCccc----------------c-cccCceeehHHHHHHHHhcCCCceeEEeehh
Confidence 3567888887777766654111 0 1112223333333 34555668888888899
Q ss_pred cCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 477 QSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 477 ~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
.+|.+.||+..|+....+-+|++++........+.. .....+....++++++++++..++.+++ ++.+
T Consensus 434 ~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~-----------yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 434 IFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN-----------YPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred hchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc-----------CCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 999999999999999999999999999886654210 1113355677999999998887766665 4666
Q ss_pred ccccccccc
Q 007932 557 YKRETKEVN 565 (584)
Q Consensus 557 ~~~~~~~~~ 565 (584)
.+..++..+
T Consensus 502 ~~~leei~~ 510 (538)
T KOG0252|consen 502 GKSLEEISN 510 (538)
T ss_pred ccCHHHhcC
Confidence 666554433
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.78 E-value=4.5e-18 Score=177.45 Aligned_cols=327 Identities=13% Similarity=0.096 Sum_probs=205.0
Q ss_pred HHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 007932 47 IQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCT 126 (584)
Q Consensus 47 ~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (584)
+.+.+| .+.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||+++++.++..++.+.+ ..
T Consensus 19 ~~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~----------- 84 (355)
T TIGR00896 19 VGPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA----------- 84 (355)
T ss_pred CcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-----------
Confidence 334444 56779999999999999999999999999999999999 99999999998877777665 33
Q ss_pred CCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc
Q 007932 127 NGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN 206 (584)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 206 (584)
++.+.+++.|++.|++.+...+..+..+.|.+| + +|+++.++++...++|..+++.+++.+.+.
T Consensus 85 ---------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 85 ---------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q------RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446778899999999999888888888888886 3 489999999999999999999999888766
Q ss_pred c--chhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccccccccccccc
Q 007932 207 L--GWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKR 284 (584)
Q Consensus 207 ~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (584)
. +||+.|.+.++..++.... + ..+ .+++++++ .+ .. .
T Consensus 149 ~~~~w~~~f~~~~~~~~~~~~~-~-~~~-~~~~~~~~-~~--------------------~~-------------~---- 187 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLALLA-W-IPQ-VRRRVAAN-QT--------------------TT-------------R---- 187 (355)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH-H-hhh-hccccCCC-CC--------------------CC-------------C----
Confidence 4 3898887665543333221 1 111 11100000 00 00 0
Q ss_pred cccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHH-HHHhhhhhhhhccccceEEEecccccCCCCCCcc
Q 007932 285 QVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALI-WLVTLIPSTIWAQINTLFVKQGTTLNRSLSPSFR 363 (584)
Q Consensus 285 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (584)
. . .++ ....+..+..... .+....++....+.+.++. + .+.+ .
T Consensus 188 -~---~-----------------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~-~g~~-------~ 231 (355)
T TIGR00896 188 -L---T-----------------PVR------IWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILI-S-HGAS-------A 231 (355)
T ss_pred -C---C-----------------Cch------hhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-cCCC-------H
Confidence 0 0 000 0001122211111 1112222222222222221 1 0111 1
Q ss_pred cCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 007932 364 IPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQ 443 (584)
Q Consensus 364 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (584)
...+.+.....++.+++.++.+++.+|+.+| .+.+.++.++.+++........
T Consensus 232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~----------~~~~~~~~~~~~~~~~~~~~~~----------------- 284 (355)
T TIGR00896 232 ATAGSLLALMQLAQAASALLIPALARRVKDQ----------RGIVAVLAVLQLVGLCGLLFAP----------------- 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccc----------hHHHHHHHHHHHHHHHHHHHhh-----------------
Confidence 1223444555666777777766665554222 1234556666666665554431
Q ss_pred ccceeehhhHHHHHHHHHHHHHHhhhceeeeeccC-CchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhh
Q 007932 444 IVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQS-PEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVT 512 (584)
Q Consensus 444 ~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~-P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~ 512 (584)
.+..+ ...++.|++.+...+.....+.+.. +++.++...++.+....+++.+++.+.+.+.+..
T Consensus 285 ---~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 285 ---MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred ---hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01111 1345678888888887666665554 4577899999999888999999999998876543
No 88
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=9.1e-17 Score=159.95 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=104.9
Q ss_pred CchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHH
Q 007932 61 EDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAF 140 (584)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (584)
.+..-.|.+-+.|.+...+.++..|.++||| |||++++++.+..++...+.+.+ .++..
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S--------------------~~F~a 123 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS--------------------RNFAA 123 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH--------------------HHHHH
Confidence 3445678899999999999999999999999 99999999999999988888877 45666
Q ss_pred HHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 141 FYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 141 ~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
+.++|++.|+.-|-. ..+.++++|+++++ .|+.+++.......+|..+||++++++.+
T Consensus 124 fv~aR~l~Gi~kgnl-~v~rAiisdV~sek------~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 124 FVLARFLGGIFKGNL-SVIRAIISDVVSEK------YRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhhhccCch-HHHHHHHHhhcChh------hccceeeeeehhhhcchhhcchhhhHHHh
Confidence 778899999998865 66789999999998 49999999999999999999999999988
No 89
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.74 E-value=1.1e-16 Score=166.98 Aligned_cols=157 Identities=11% Similarity=0.091 Sum_probs=119.0
Q ss_pred HHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc----cchhHHH-HHHHHHHHHHHHHHHHhhhccccC
Q 007932 48 QSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY----IGRFWTF-TLSSLIYVLGMILLTMAASLKFMK 122 (584)
Q Consensus 48 ~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 122 (584)
.....+.+.+++|+|.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++.+++...+++..+
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----- 79 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----- 79 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----
Confidence 3333444456889999999988644 344444 88999999996 3899975 5666666666555555421
Q ss_pred CCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhh
Q 007932 123 PTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVY 202 (584)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 202 (584)
..+.+.+....++.+++.+...+...+++.|.+|++ +|+++.++...+.++|..+++.++++
T Consensus 80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 134555666677778888888899999999999887 59999999999999999999999999
Q ss_pred hhcccc--------hhHHHHHHHHHHHHHHHHHHH
Q 007932 203 IQENLG--------WGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 203 l~~~~~--------~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+.+..+ ||.+|++.++..++..+..++
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 988888 999999888876665554443
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.73 E-value=8.9e-16 Score=163.94 Aligned_cols=443 Identities=12% Similarity=0.002 Sum_probs=251.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc----ccchhHHHHHH-H
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADT----YIGRFWTFTLS-S 102 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grk~~~~~~-~ 102 (584)
++++.+..+.+..++++-...++++.|+ +++|.+....+.+.....+...+.+|+.|+++|| + ||||.++++ .
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~ 81 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHH
Confidence 5567778888888999888888888886 5799999999999999999999999999999995 8 999998875 5
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
+..+++.++++++.++..+. +............+.+.++..+..++.....+...++++|.+|++++ +++.+.
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~---~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a~ 154 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLF---GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIAN 154 (477)
T ss_pred HHHHHHHHHHHhCchhhhhc---cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHHH
Confidence 56666666666654321100 00000000001113344555556678888888889999999998752 236899
Q ss_pred eeehhHHhHhHHHHhhhhhhh--hccc-------------chhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhh
Q 007932 183 NWWMFSSFIGALCATLGLVYI--QENL-------------GWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARD 247 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l--~~~~-------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (584)
++++.+.++|+.+|+.+++.. .+.+ +.+..|++.++..+++.+...+..++.+...+++ .+
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~-~~--- 230 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD-FI--- 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc-ch---
Confidence 999999999999999988865 2211 5678898887776666655444333221111110 00
Q ss_pred hHHHHHHHHhhccccCCCCCCCccccccccccccccccccCCCc-chhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH
Q 007932 248 LIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPA-FRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM 326 (584)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (584)
++.++.. + ..+. .+. .+.++.. ..--|.+.+.
T Consensus 231 --------------------~~~~~~~--~-~~~~------~~~~~~i~~~~------------------~~mP~~m~~l 263 (477)
T TIGR01301 231 --------------------NSEAAPP--S-KHGE------EAFFGELFGAF------------------KYLPRPVWIL 263 (477)
T ss_pred --------------------hhhcccc--c-ccch------hhhHHHHHHHH------------------HHCCHHHHHH
Confidence 0000000 0 0000 000 0111110 0011333344
Q ss_pred HHHHHHhhhhhhhhccccceEEEec-ccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChh
Q 007932 327 ALIWLVTLIPSTIWAQINTLFVKQG-TTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITML 405 (584)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 405 (584)
+.+-++..+-|..+..+.+.++-+. .+.+..-...|.. .........+...+...+...+..++.|+..+ ..
T Consensus 264 ~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~-gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~------~k 336 (477)
T TIGR01301 264 LLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDD-GVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA------GK 336 (477)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------ch
Confidence 4444444444443333333322211 0000000000100 10112222222222222333444555555421 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--h-ccccccCCCCCcccee-ehhhHHHHHHHHHHHHHHhhhceeeeeccCCc-
Q 007932 406 QRLGVGFVIQVMAIAIAYAVEVRRMH--V-IRVQHISGPKQIVPMS-IFWLLPQYVLLGVADVFNAIGLLEFFYDQSPE- 480 (584)
Q Consensus 406 ~~i~ig~~l~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~-~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~- 480 (584)
..-.++.++.++|++...++.....+ . .+.++.. ..+.. .+..+..+.+.|+.....+..-++++.+..|+
T Consensus 337 ~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 337 RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESL----PPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccc----CcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 22367878888888777665321000 0 0000000 00011 25566777888998888888888999888885
Q ss_pred -hhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 007932 481 -DMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 481 -~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
+..|..+|+.|.+..+...+.....+.+.+..+. +...++.+.++.++++++..++..|+.
T Consensus 413 ~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4559999999999999999988877775543321 223457777777777777777666654
No 91
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=1e-20 Score=203.88 Aligned_cols=142 Identities=18% Similarity=0.228 Sum_probs=118.7
Q ss_pred hhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHH
Q 007932 65 SSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSS 144 (584)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (584)
..++..+...++..++.+++|+++||+ |||++++++.++..++.++..++.. ..+.+.+.++
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~-----------------~~~~~~~~~~ 108 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS-----------------YNNFWMLLIG 108 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc-----------------cccccccccc
Confidence 467889999999999999999999999 9999999999999999998888731 1267889999
Q ss_pred HHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc---cchhHHHHHHHHHHH
Q 007932 145 LYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN---LGWGLGYGIPTAGLL 221 (584)
Q Consensus 145 ~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~f~~~~~~~~ 221 (584)
|++.|++.|...+....++.|..|++ .|+....+.+....+|..++..++-.+.+. .+||..+.+..+..+
T Consensus 109 R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l 182 (451)
T PF00083_consen 109 RFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSL 182 (451)
T ss_pred cccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999988 599999999999999998887666544332 459999888777655
Q ss_pred HHHHHHHHh
Q 007932 222 FSLVIFYIG 230 (584)
Q Consensus 222 ~~~~~~~~~ 230 (584)
+..+..+..
T Consensus 183 ~~~~~~~~~ 191 (451)
T PF00083_consen 183 LVLLLRFFL 191 (451)
T ss_pred ccccccccc
Confidence 544444443
No 92
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.73 E-value=2.6e-15 Score=159.45 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc----cchhH-HHHHHHHHHHHHHH
Q 007932 36 YEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY----IGRFW-TFTLSSLIYVLGMI 110 (584)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~-~~~~~~~~~~~~~~ 110 (584)
..+.....+.-....+|.|+++ .|+|..+.|++...... ++..++.|+++||+ .|||| .++++.++.+++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 3444455555556777888875 49999999998766655 69999999999997 26665 67777888777777
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++.+... ..+.+.+.+..++.+...+...+...+++.|.+|++ +|+++.++...+.+
T Consensus 84 ~l~~~~~-----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~~g~~ 140 (402)
T PRK11902 84 AMAFCPP-----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKVLGYR 140 (402)
T ss_pred HHHhcCc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHHHHHH
Confidence 6666421 134666777767778888888899999999999887 59999999999999
Q ss_pred HhHHHHhhhhhhhhcc-cchhHHHHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQEN-LGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~-~~~~~~f~~~~~~~~~~~~~ 226 (584)
+|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 141 ~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 141 LAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999888875 59999999888765554443
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.73 E-value=1.8e-16 Score=176.84 Aligned_cols=200 Identities=16% Similarity=0.168 Sum_probs=155.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
..+|.+.+.+....+.+....++.......++++++++..+.|++.+.+.++..++.++.|+++||+ ||||.+.+++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 4455555555556666667777778777888999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhccc-----------------cCCCCCCC------------CcCCCC--cchHHHHHHHHHHHHHhcc
Q 007932 105 YVLGMILLTMAASLKF-----------------MKPTCTNG------------ICSKTS--TSQIAFFYSSLYIIAIGAG 153 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~------------~~~~~~--~~~~~~~~~~~~~~gi~~g 153 (584)
++++.+++++...+.. -.+.|.+. .|...+ .....+++++|+++|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999887641110 00112111 111111 1235678899999999999
Q ss_pred cccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhccc----------------------chhH
Q 007932 154 GTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENL----------------------GWGL 211 (584)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------~~~~ 211 (584)
...+...+++.|.+|++ +|+...++++.+..+|..+|+++++++.+.+ +|+.
T Consensus 188 ~~~~~~~~~i~d~~~~~------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSK------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred cchhcCchhhhccCCcc------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 99999999999999988 5999999999999999999999999987542 2777
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 007932 212 GYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 212 ~f~~~~~~~~~~~~~~~~~~ 231 (584)
.|++.+++.++..+.++..+
T Consensus 262 ~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHHHHHHHHhCc
Confidence 78887776655554444443
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.72 E-value=1.3e-15 Score=150.69 Aligned_cols=422 Identities=13% Similarity=0.025 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 007932 39 FERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASL 118 (584)
Q Consensus 39 ~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~ 118 (584)
.+........+.+.+-+....|.+..+..++......++.+++...|.++|++ ||||.+.+..+...+.-.+-+.+
T Consensus 88 mad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s--- 163 (528)
T KOG0253|consen 88 MADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS--- 163 (528)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC---
Confidence 33334455556666677888999999999999999999999999999999999 99999988876555544444443
Q ss_pred cccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhh
Q 007932 119 KFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATL 198 (584)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 198 (584)
+++..+++.|.+.|+|.|+ .|...++-.|..|... |....-.. +...+|.+....
T Consensus 164 -----------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea~ 218 (528)
T KOG0253|consen 164 -----------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEAL 218 (528)
T ss_pred -----------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHHH
Confidence 6778899999999999999 8999999999999773 66655555 778889988877
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccccccc
Q 007932 199 GLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDY 278 (584)
Q Consensus 199 ~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (584)
+.=.+..++||||..........+...+.++.++..+....++ ++.+...-...-+-.|++ +.|.........+++++
T Consensus 219 law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G-~~~kAletL~kiArmNg~-qlplgvl~~s~~~~~e~ 296 (528)
T KOG0253|consen 219 LAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKG-DDYKALETLHKIARMNGK-QLPLGVLESSAIDRQEQ 296 (528)
T ss_pred HHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcC-ChHHHHHHHHHHHHhcCC-CCCcceeeeehhhhhhh
Confidence 7766778899999888777666666666666665544443333 332222222222223333 33333222222222111
Q ss_pred ccccccccc----CCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHH-hhhhhhhh------ccccc--
Q 007932 279 IRSGKRQVV----HSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLV-TLIPSTIW------AQINT-- 345 (584)
Q Consensus 279 ~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~-- 345 (584)
...+..... +.......+ .++ ..-+|+.+....+++. .-.++... .|...
T Consensus 297 e~~~~~~~~~~a~ke~rg~~~n--------------Lls---p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c 359 (528)
T KOG0253|consen 297 EESDLDDSKSSAAKEVRGGTTN--------------LLS---PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDAC 359 (528)
T ss_pred hhhchhhhhhccccccccchHh--------------hcC---hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcc
Confidence 111100000 000010000 000 1112333322222222 22222111 11110
Q ss_pred --eEEEecccccCCCCCCcccCccccc-cchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 007932 346 --LFVKQGTTLNRSLSPSFRIPAASLG-SFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIA 422 (584)
Q Consensus 346 --~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~ 422 (584)
+.-..+...+....-.+........ .+..+.-..+..+...++++++||. .++..+++++++.+..
T Consensus 360 ~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKk-----------TMal~l~~f~iflfll 428 (528)
T KOG0253|consen 360 PLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKK-----------TMALSLILFGIFLFLL 428 (528)
T ss_pred ccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchh-----------HHHHHHHHHHHHHHHH
Confidence 0000000000000000000000000 0112222333334445566667773 3777778887777766
Q ss_pred HHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHH
Q 007932 423 YAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNS 502 (584)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~ 502 (584)
...+.+ + ......+....+....+...+.|..|.+|...|+++.|....++.+|+++.|
T Consensus 429 ~~c~~r-------------------n--~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p 487 (528)
T KOG0253|consen 429 TTCKTR-------------------N--AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSP 487 (528)
T ss_pred HHhcCc-------------------c--hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhh
Confidence 554211 1 1111223334445566778899999999999999999999999999999999
Q ss_pred HHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhccccc
Q 007932 503 FLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYVYK 558 (584)
Q Consensus 503 ~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~~ 558 (584)
.+. +.... +....-.+.+.+++++++...++-.+.|+|
T Consensus 488 ~iA-~~~e~-----------------s~sl~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 488 VIA-MRAEL-----------------STSLPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred HHH-HHhcc-----------------ceeehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 887 43311 111224556666666666555554455554
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.71 E-value=8.7e-16 Score=165.32 Aligned_cols=176 Identities=11% Similarity=0.039 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc----ccchhHH-HHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADT----YIGRFWT-FTLSSLIY 105 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grk~~-~~~~~~~~ 105 (584)
+.--+..+..++....+..+++.|+++.+|+++..+|.+..+..+...+..|+.|+++|| + ||||. ++++.+..
T Consensus 12 ~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~ 90 (444)
T PRK09669 12 IGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPF 90 (444)
T ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHH
Confidence 333455566777777778889999999999999999999999999999999999999999 6 87555 54666666
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+++.+++.... .. ........+++..++.+++.........++.+|+.++.+ +|.+..++.
T Consensus 91 ~i~~~l~f~~p---~~-----------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r 151 (444)
T PRK09669 91 GVVCLLTFYTP---DF-----------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWR 151 (444)
T ss_pred HHHHHHHHhCC---CC-----------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHH
Confidence 66655544331 10 011334455666666677777777778889999886554 588888998
Q ss_pred hhHHhHhHHHHhhhhhhhhc-------ccchhHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQE-------NLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~-------~~~~~~~f~~~~~~~~~~~~~ 226 (584)
....++|..+++.+...+.. ..+|+..+.+.+++.++..++
T Consensus 152 ~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 152 FALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88889988888765544332 246776766666554444433
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.71 E-value=1e-15 Score=168.21 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=125.9
Q ss_pred hhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcc
Q 007932 57 SQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTS 136 (584)
Q Consensus 57 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (584)
+..+.+.....+..+.+.+|..+++++.|.++||+ |||+++++++++.+++.++.+++ +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a--------------------~ 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA--------------------P 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh--------------------C
Confidence 56677778888999999999999999999999997 99999999999999999888887 6
Q ss_pred hHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHH
Q 007932 137 QIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIP 216 (584)
Q Consensus 137 ~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~ 216 (584)
+.+.+++.|++.|++.++...+...+++|.++++ .|+.+..+ ......++.+++.+++++.. +||+.+++.
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~ 240 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWII 240 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 7889999999999999999999999999999999 59999999 88888888888899998877 899999988
Q ss_pred HHHHHHHHHH
Q 007932 217 TAGLLFSLVI 226 (584)
Q Consensus 217 ~~~~~~~~~~ 226 (584)
.+..++.++.
T Consensus 241 ~~~~~~~~~~ 250 (521)
T KOG0255|consen 241 SIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHH
Confidence 7776655555
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.70 E-value=1.9e-15 Score=164.01 Aligned_cols=366 Identities=12% Similarity=0.053 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhh----cccchh-HHHHHHHHHHHH
Q 007932 33 LVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIAD----TYIGRF-WTFTLSSLIYVL 107 (584)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grk-~~~~~~~~~~~~ 107 (584)
--+..+..++....+.++++.|+++.+|+++..+|.+..+..+.-.+..|+.|+++| |+ ||| +.++++.+..++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHH
Confidence 345566777888888899999999999999999999999999999999999999999 67 985 455567667677
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++.... .. .+......+.+..++.+++.........++..|..++.+ +|.+..++...
T Consensus 90 ~~~llf~~p---~~-----------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~ 150 (473)
T PRK10429 90 VLFLLFSAH---LF-----------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRF 150 (473)
T ss_pred HHHHHHcCC---CC-----------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHH
Confidence 665554321 10 011123345555566778888888888899999986554 69999988788
Q ss_pred HHhHhHHHHhhhhhhhhc-------ccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhcc
Q 007932 188 SSFIGALCATLGLVYIQE-------NLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRK 260 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (584)
..++|+.+++.+...+.. ..+|+....+.++..++..+..+...++. ..++.+.+
T Consensus 151 ~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~--~~~~~~~~---------------- 212 (473)
T PRK10429 151 FASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV--YSSDNQVS---------------- 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec--CCcccccc----------------
Confidence 888887766555443322 12455555544444333333333222211 00000000
Q ss_pred ccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhh
Q 007932 261 IQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIW 340 (584)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (584)
+++ +..++.+..+. ..+.|.++......+.........
T Consensus 213 ---~~~-----------------------~~~~~~~~~~~----------------~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 213 ---AEG-----------------------SHLTLKDIVAL----------------IYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred ---ccc-----------------------cCCCHHHHHHH----------------HhcCHHHHHHHHHHHHHHHHHHHH
Confidence 000 00001110000 001122222222222221222222
Q ss_pred ccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 007932 341 AQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIA 420 (584)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~ 420 (584)
.....++...... +. . ....+..+..++.+++.++..++.+|+++| +.+.++..+..++.+
T Consensus 251 ~~~~~y~~~y~~~-~~------~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----------~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 251 NGFAIYYFTYVIG-DA------D-LFPYYLSYAGAANLVTLILFPRLVKSLSRR-----------ILWAGASIFPVLSCG 311 (473)
T ss_pred hhheeeEEEEECC-CH------H-HHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHH
Confidence 2222222222111 00 0 111233334455666666666554444443 234455554444443
Q ss_pred HHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCC-------chhHHHHHHHHHHH
Q 007932 421 IAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSP-------EDMQSLGTTFFTSG 493 (584)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~gi~~~~ 493 (584)
....... ..+.+.+.+++..++.+++.+...+..++++.|.++ .+..|...|...+.
T Consensus 312 ~~~~~~~----------------~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~ 375 (473)
T PRK10429 312 VLLLMGL----------------AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMV 375 (473)
T ss_pred HHHHHhc----------------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHH
Confidence 3322100 001123344555667788888888888888888866 45567789999999
Q ss_pred HhHHHHHHHHHHHHhhhhhc
Q 007932 494 IGVGNFLNSFLVTLVDKVTG 513 (584)
Q Consensus 494 ~~lg~~lg~~l~~~i~~~~~ 513 (584)
..+|..+++.+.+.+.+..+
T Consensus 376 ~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 376 VKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999988876554
No 98
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.70 E-value=9.5e-15 Score=157.93 Aligned_cols=386 Identities=14% Similarity=0.117 Sum_probs=215.7
Q ss_pred CcchhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc-----hhHHHH
Q 007932 26 KWKACAFL-VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG-----RFWTFT 99 (584)
Q Consensus 26 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rk~~~~ 99 (584)
+++..+.+ ....+.+... +.+...++.++.+++|+|+++.+...+...+...+-++ +|.++||+ + ||+.++
T Consensus 23 ~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~ 99 (468)
T TIGR00788 23 HPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLV 99 (468)
T ss_pred CcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHH
Confidence 34444444 4456666676 77777888899999999999998888888888888655 99999998 7 777777
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
++.++.. ...+..++.. ........+.+++.+++.+.......++..|..+ +++ ..++
T Consensus 100 ~~~~l~~-~~~~~~l~~~-----------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~ 157 (468)
T TIGR00788 100 LSGLLGS-AILYGLLPGK-----------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGP 157 (468)
T ss_pred HHHHHHH-HHHHHhcccc-----------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCC
Confidence 7766552 1122222210 0123334446778899999999999999999998 421 0233
Q ss_pred eeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhc
Q 007932 180 SFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNR 259 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (584)
...++.+.+.++|..+|+.++|.+.+.++|+..|++.++..++..+...+..++.....|+. ...
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~-~~~-------------- 222 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRI-GTY-------------- 222 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccc-ccc--------------
Confidence 44555555667999999999999999899999999887776666443333322110011110 000
Q ss_pred cccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhh
Q 007932 260 KIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTI 339 (584)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (584)
....+ .....+ ..... ...+.+... .-.++.++....+.+.. +...
T Consensus 223 --------~~~~~----~~~~~~--~~~~~-~~~~~~l~~-----------------~l~~~~i~~~l~fifl~--~~~~ 268 (468)
T TIGR00788 223 --------LEMNM----ALLTLG--VLANV-KVQILGLRG-----------------AIQLLEIAKPLIFIFLS--YANL 268 (468)
T ss_pred --------chhhh----hhhhhh--HHHHH-HHHHHHHHH-----------------HHhcHHHHHHHHHHHHH--Hhhc
Confidence 00000 000000 00000 000000000 00012222211111110 1111
Q ss_pred hccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHH
Q 007932 340 WAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAI 419 (584)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~ 419 (584)
.....+.+..... ....+ ....+.+.....++.+++..+.+++ .+|. +..+.+.++.++.+++.
T Consensus 269 ~~~~~~~f~~~~~--~lG~s---~~~~G~~~~~~~v~~i~g~~~~~~~----~~~~-------~~r~~l~~~~~l~~~~~ 332 (468)
T TIGR00788 269 PGASGSVFCATTQ--CLPGG---PSFSGMSKVVGNLGSLCGVGGYDRF----LKTF-------PYRLLFGVTTLLYTLSS 332 (468)
T ss_pred CCCCceeEEEEcc--cCCCC---cchhhhHHHHHHHHHHHHHHHHHHH----HhhC-------CHHHHHHHHHHHHHHHH
Confidence 1222222222211 11111 1222333334445555555554444 3332 34455666666666555
Q ss_pred HHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHH
Q 007932 420 AIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNF 499 (584)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~ 499 (584)
........ +.+. ..+ ....++.+...++.+++.++...+...++.+.+|++.+|+..|+.++..++|..
T Consensus 333 ~~~~~l~~-~~~~--~~g--------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~ 401 (468)
T TIGR00788 333 LFDLILVK-RWNL--AFG--------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSS 401 (468)
T ss_pred hCceeeee-cccc--ccC--------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHH
Confidence 43221100 0000 000 012234455567788888888888899999999999999999999999999999
Q ss_pred HHHHHHHHhhhhh
Q 007932 500 LNSFLVTLVDKVT 512 (584)
Q Consensus 500 lg~~l~~~i~~~~ 512 (584)
+++.+.+.+.+..
T Consensus 402 v~~~~gg~l~~~~ 414 (468)
T TIGR00788 402 VSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHc
Confidence 9998888876543
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.69 E-value=1.2e-16 Score=160.12 Aligned_cols=149 Identities=13% Similarity=0.050 Sum_probs=136.8
Q ss_pred hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcch
Q 007932 58 QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQ 137 (584)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (584)
.++-+..+.|++.....+.+.+..++.|.+.||+ |+|-.+++|+..+...+++.++. .+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg--------------------~s 158 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG--------------------NS 158 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc--------------------ch
Confidence 4566778999999999999999999999999998 99999999999999999999997 44
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHH
Q 007932 138 IAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPT 217 (584)
Q Consensus 138 ~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~ 217 (584)
.++++++|.++|+|.++...+..++++|.||+++ +|++++|+.-.+..+|-.+||..+|.+.+..|.+.+|.+.+
T Consensus 159 y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~ 233 (464)
T KOG3764|consen 159 YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLA 233 (464)
T ss_pred hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHH
Confidence 7789999999999999999999999999999987 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCC
Q 007932 218 AGLLFSLVIFYIGSP 232 (584)
Q Consensus 218 ~~~~~~~~~~~~~~~ 232 (584)
+..++-..+.++..+
T Consensus 234 ~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 234 IVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHHHHHheeC
Confidence 887777776665543
No 100
>PTZ00207 hypothetical protein; Provisional
Probab=99.69 E-value=1.6e-14 Score=157.48 Aligned_cols=159 Identities=11% Similarity=0.030 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007932 44 FYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKP 123 (584)
Q Consensus 44 ~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (584)
.|++. .....+++++|+|..+.+++.+... ...++.+++|+++||+ |||+++.++.+++.+++++++++.+-
T Consensus 43 ~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~----- 114 (591)
T PTZ00207 43 MYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQE----- 114 (591)
T ss_pred HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 34443 3445678999999999998887643 4456777899999999 99999999999999999999886310
Q ss_pred CCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHH-Hhhhhhh
Q 007932 124 TCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALC-ATLGLVY 202 (584)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~ 202 (584)
.-..+.+.+++.|++.|+|.+...+.....+.++||+ +|+++.++...+.++|+++ +++..++
T Consensus 115 ---------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 115 ---------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred ---------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0014688899999999999998888888899999974 3899999999999999985 5555555
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 203 IQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 203 l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+. .+|+..|++.++..++..++.+
T Consensus 179 ~~--~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 179 FS--DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HH--HhHHHHHHHHHHHHHHHHHHHH
Confidence 44 3577777777666444444433
No 101
>PRK09848 glucuronide transporter; Provisional
Probab=99.68 E-value=6.6e-15 Score=158.69 Aligned_cols=155 Identities=8% Similarity=-0.005 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc---cchhHHH-HHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY---IGRFWTF-TLSSLIY 105 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~-~~~~~~~ 105 (584)
.+.-....+..++.+..+.++++.|+++.+|+++.++|.+.+...+...+..++.|+++||. .||||.+ +++.+..
T Consensus 10 ~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~ 89 (448)
T PRK09848 10 IVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL 89 (448)
T ss_pred HHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH
Confidence 33344556677777777788888999999999999999999999999999999999999994 2666655 5555544
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.+...++..... .. ........+++..++.+++.+...+...++..+..++.+ +|.+..++.
T Consensus 90 ~~~~~~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r 151 (448)
T PRK09848 90 MIFSVLVFWVPT--DW-----------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAAR 151 (448)
T ss_pred HHHHHHHHhCcC--CC-----------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHH
Confidence 444444322110 00 001123334455566788888888888888787777654 477766665
Q ss_pred hhHH-----hHhHHHHhhhhhh
Q 007932 186 MFSS-----FIGALCATLGLVY 202 (584)
Q Consensus 186 ~~~~-----~~g~~~g~~~~~~ 202 (584)
.++. +++..++|.+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 152 GIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5443 3455555655543
No 102
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.68 E-value=1.1e-15 Score=159.31 Aligned_cols=174 Identities=12% Similarity=0.065 Sum_probs=142.7
Q ss_pred CcchhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh-hhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 26 KWKACA-FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVS-SVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 26 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
.|+..- ++|+..|+..+ -...++..+|+.+++|++..+ .|.+.+.+..++.++.+++|+++||+ |-||++.++.+
T Consensus 24 ~W~~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l 100 (511)
T TIGR00806 24 SWRVLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQAL 100 (511)
T ss_pred chhHHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 344433 34444444433 334566778999999999999 99999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
...+..++++++. +...+.+.|++.|++.|... +...++..++|++ +|+++.+
T Consensus 101 ~Wsl~t~L~~fa~--------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~rats 153 (511)
T TIGR00806 101 SFVCVWLLLLLGT--------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQRAAA 153 (511)
T ss_pred HHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHHHHH
Confidence 9999999999873 47789999999999999999 9999999999988 5999999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHH---HHHHHHHHHHHHHHHh
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYG---IPTAGLLFSLVIFYIG 230 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~---~~~~~~~~~~~~~~~~ 230 (584)
+...+.++|.+++++++++ ...+||++-+. +......+++++.++.
T Consensus 154 i~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 154 YSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999 45679986544 3444444554444443
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.68 E-value=2.2e-15 Score=161.48 Aligned_cols=357 Identities=13% Similarity=0.130 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhh----cccchhHHHH-HHHHHHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIAD----TYIGRFWTFT-LSSLIYVLGMIL 111 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grk~~~~-~~~~~~~~~~~~ 111 (584)
.+..++.......++..|+++.+|+++...+.+.....+...+..|+.|+++| |+ ||||.++ ++.++.+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 45666666667778899999999999999999999999999999999999999 77 9777555 566777777666
Q ss_pred HHHhhhcc-ccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 112 LTMAASLK-FMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 112 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
+.... | .+. .......+.+..++..++......+..++..|..++++ +|.+..++......
T Consensus 89 lf~~~--p~~~~-----------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 89 LFSPP--PAGLS-----------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSM 150 (428)
T ss_pred hhccc--cchhh-----------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHH
Confidence 66431 1 000 01123335666667789999999999999999998765 69999999999999
Q ss_pred HhHHHHhhhhhhhhccc-------chhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccC
Q 007932 191 IGALCATLGLVYIQENL-------GWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQL 263 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~-------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (584)
+|..+...+.+.+.+.. +|++...+.++..++..++.+...++.+.+.+++ .+..
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~-~~~~----------------- 212 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ-EKKI----------------- 212 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccc-cccc-----------------
Confidence 98876666666554322 5777777666665555444444333200000100 0000
Q ss_pred CCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccc
Q 007932 264 PDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQI 343 (584)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (584)
... +.. + ...+.|.........+.....+......
T Consensus 213 -----~~~------------------~~~-----------------~-----~~~~nr~~~~l~~~~~~~~~~~~~~~~~ 247 (428)
T PF13347_consen 213 -----SLR------------------DSL-----------------R-----SLFRNRPFRILLLAFFLQWLAFALMNTF 247 (428)
T ss_pred -----ccc------------------cch-----------------h-----hhcccchHHHHHHHHHHHHhhhhhhhhH
Confidence 000 000 0 0001112222221211111111111111
Q ss_pred cceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007932 344 NTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAY 423 (584)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~ 423 (584)
..++.... ++ .....+.+.....++.++..+++.++.+|+++|+ .+..+.++.+++.++..
T Consensus 248 ~~y~~~~v------l~--~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~-----------~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 248 LPYYFTYV------LG--NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKK-----------VYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHHHHHH------hc--CchhhHHHHHHHHHHHHHHHHHHHHHHHHcccee-----------ehhhhHHHHHHHHHHHH
Confidence 11111110 10 0111223344556667777777777755554442 36777777777777666
Q ss_pred HHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCc-------hhHHHHHHHHHHHHhH
Q 007932 424 AVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPE-------DMQSLGTTFFTSGIGV 496 (584)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~-------~~rg~~~gi~~~~~~l 496 (584)
+.. ..+.++.++..++.+++.+..+...+.+..|..+. +..|...|++++...+
T Consensus 309 ~~~-------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 309 FLG-------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred HHH-------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 552 13567788888899999999999999999998873 4569999999999999
Q ss_pred HHHHHHHHHHHhhhhhc
Q 007932 497 GNFLNSFLVTLVDKVTG 513 (584)
Q Consensus 497 g~~lg~~l~~~i~~~~~ 513 (584)
+..++..+.+.+....+
T Consensus 370 ~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999988776554
No 104
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.67 E-value=2.7e-14 Score=150.97 Aligned_cols=177 Identities=12% Similarity=0.001 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhH--HHHHHHHHHHhhhHh-HHHhhcccchhHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRN--VNNWSGVVWITPLLG-AYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~-G~laD~~~Grk~~~~~~~~~~~ 106 (584)
...+....+.+...+..+.+.+|.|++ +.|.|..+.|.. .....+...+.+|+. ++..||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344455566777777777788888886 559999999986 355677776777776 6689998 99999766654322
Q ss_pred H-HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 107 L-GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 107 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
. +...+.... + .......+....++.++..+...+...++..|..+++ +++...+..
T Consensus 81 ~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~------~~~~~~~~~ 138 (390)
T TIGR02718 81 SACLASLALVG--P--------------DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR------TLAKGNAVQ 138 (390)
T ss_pred HHHHHHHHcCC--c--------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhhHHHHHH
Confidence 2 222222110 0 0011222333444455555666666666667766655 367677777
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
..+..+|..+|+.+.+++.+..||+..|++.++..++..+..+..
T Consensus 139 ~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 139 IAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 778888999998888899999999999999887766555554443
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.65 E-value=5.1e-15 Score=159.94 Aligned_cols=421 Identities=13% Similarity=0.042 Sum_probs=252.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH---HHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNL---VNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~---~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
-|++++..+..++..+++.... ...+.++++.+..+++|+.++......+..|+.+.+.||+ |.|.+.++|.++..
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 4666666666666666554433 3456788999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHH-HHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLY-IIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+|.++..+++ +.+.+++..- +.|+|.|..+....+++..+|+.+ |+.+.++.
T Consensus 123 ~g~~lssF~~--------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia 175 (509)
T KOG2504|consen 123 LGLLLSSFAT--------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIA 175 (509)
T ss_pred HHHHHHHHHh--------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhh
Confidence 9999999984 4655555554 568999999999999999888754 99999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHH-hhccccCC
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAF-RNRKIQLP 264 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 264 (584)
..+..+|..+-|.+..++.+.+|||..+++.+.+.+-..+.....+|......|....+... ........ .......+
T Consensus 176 ~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 254 (509)
T KOG2504|consen 176 VSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN-SAASVESTPKPVELRIS 254 (509)
T ss_pred hccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc-ccccccccccccccccc
Confidence 99999999999999999999999999999887776555555555555322221110000000 00000000 00000000
Q ss_pred -CCCCCccccc-ccccccc-ccccccCCCc--chhhhHHHHhcCCCCCCCCCcccccchhhHHHHH-HHHHHHHhhhhhh
Q 007932 265 -DNPSELHEFD-TQDYIRS-GKRQVVHSPA--FRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLG-MALIWLVTLIPST 338 (584)
Q Consensus 265 -~~~~~~~~~~-~~~~~~~-~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 338 (584)
.+........ +..+..+ .......... ...+|...+ .+ +.++. .....+....+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll-----------------~~-~~fl~~~~~~~~~~~g~~~ 316 (509)
T KOG2504|consen 255 ERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLL-----------------KD-PKFLLLALSNLFAYLGFNV 316 (509)
T ss_pred cCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHH-----------------cC-chHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000 0000000000 000000000 01 11111 1111111211111
Q ss_pred hhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHH
Q 007932 339 IWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMA 418 (584)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~ 418 (584)
.....+.+.. +.. .-......+.++......++-++.+.+.|+-. ++......+++++.+++
T Consensus 317 p~~~l~~~~~------~~g---~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~---------~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 317 PFVYLPSYAK------SLG---LSSNDAAFLLSIIGVSDIIGRIILGLLADKPG---------IRALVLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHHHh------hcC---CChhhhHHHHHHHHHhhhhhhhhhhhhcCccc---------cchHHHHHHHHHHHHHH
Confidence 1111111111 111 11223334455555666666666666644333 12334456677777766
Q ss_pred HHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHH
Q 007932 419 IAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGN 498 (584)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~ 498 (584)
..+.... .+.+.++...+++|++.+.........+.+.++.+.-+.+.|+..++..++.
T Consensus 379 ~~~~p~~---------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~ 437 (509)
T KOG2504|consen 379 RLFLPFA---------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA 437 (509)
T ss_pred HHHHHHh---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH
Confidence 6555554 3445677777888888888888777788899999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhh
Q 007932 499 FLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWA 551 (584)
Q Consensus 499 ~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~ 551 (584)
.+|+-+.+.+.+.+ ++|+..|++.++..+++....++.
T Consensus 438 l~gpPiag~~~d~t---------------g~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 438 LVGPPIAGLLYDIT---------------GNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HcCcccceeeeecc---------------CCeeeehhhcChHHHHHHHHHHHh
Confidence 99988876544322 236667888888777776544443
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.65 E-value=8.7e-14 Score=146.65 Aligned_cols=376 Identities=13% Similarity=0.124 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAA 116 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~ 116 (584)
.++..+.+-...++++.|+++ .|+|..|+|.+.+...+...+.+++.|+++||...+||.+.+..++.++...+....
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~- 88 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS- 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 344444444556888899875 589999999999999999999999999999998346777777666655554444433
Q ss_pred hccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHH
Q 007932 117 SLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCA 196 (584)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 196 (584)
.+.+.+++..++..+......|...++..+...+ ++.-++-......+|..++
T Consensus 89 -------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 89 -------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred -------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhhhhHHHHHH
Confidence 3456666667777888787788888877776652 3455666666677777776
Q ss_pred hhh-hhhhhcccc---hhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccc
Q 007932 197 TLG-LVYIQENLG---WGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHE 272 (584)
Q Consensus 197 ~~~-~~~l~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (584)
... ++++....+ ..+.+++.+...++.....+. .|+.+.++.++ .+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~-~~~~-------------------------- 193 (400)
T PF03825_consen 142 ALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAK-ESVK-------------------------- 193 (400)
T ss_pred HHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccC-CCcc--------------------------
Confidence 443 233332222 234455554433222222222 22211000000 0000
Q ss_pred cccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHH-HHHHHHhhhhhhhhccccceEEEec
Q 007932 273 FDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGM-ALIWLVTLIPSTIWAQINTLFVKQG 351 (584)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (584)
+....+..+ .-++|+++.. ...++........+.. .+.++.+.
T Consensus 194 ------------~~~~~~~~~-----------------------llk~~~~~~Fll~~~l~~~~~~~~~~f-~~~yl~~~ 237 (400)
T PF03825_consen 194 ------------KLLGLDALK-----------------------LLKNPRFLVFLLAAFLIGISHAAYYTF-FSIYLQEL 237 (400)
T ss_pred ------------cccchHHHH-----------------------HhcCccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHc
Confidence 000000000 0001122111 1111222222221111 12121211
Q ss_pred ccccCCCCCCcc-cCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007932 352 TTLNRSLSPSFR-IPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRM 430 (584)
Q Consensus 352 ~~~~~~~~~~~~-~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~ 430 (584)
+ ++. ...+.+..+..+.-++.-...+ ++.+|. +..+.+.++.+..++=..+.....
T Consensus 238 -------g-g~~~~~~g~~~~l~~~aEi~~f~~~~----~~~~r~-------g~~~ll~~a~~~~~vR~~l~a~~~---- 294 (400)
T PF03825_consen 238 -------G-GYSGSTIGILWALGVVAEIPFFFFSG----RFLKRF-------GIKWLLLLALVAYAVRWLLYAYFS---- 294 (400)
T ss_pred -------c-cchhhHHHHHHHHHHHHHHHHHHHHH----HHHHhc-------CHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 1 011 1111222233333334333333 334443 344556777666665555554441
Q ss_pred hhccccccCCCCCccceeehhh----HHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHH-HHhHHHHHHHHHH
Q 007932 431 HVIRVQHISGPKQIVPMSIFWL----LPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTS-GIGVGNFLNSFLV 505 (584)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~l----i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~-~~~lg~~lg~~l~ 505 (584)
.++++. +....+.|+..++.......|+.+.+|++.|++++++++. ..++|+.+|..+.
T Consensus 295 ----------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 295 ----------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred ----------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 122222 2223568999999999999999999999999999999885 5679999999999
Q ss_pred HHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 007932 506 TLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSR 554 (584)
Q Consensus 506 ~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~ 554 (584)
+.+.+..+.++ ...+..+|.+.+++.++..+.++++.|+
T Consensus 359 G~l~~~~g~~~----------~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 359 GWLYDAFGARG----------MFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHhcchh----------hhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 88875433211 0112234555666666665555555443
No 107
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.65 E-value=4.2e-14 Score=153.28 Aligned_cols=151 Identities=15% Similarity=0.205 Sum_probs=118.1
Q ss_pred HHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCC
Q 007932 50 NLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGI 129 (584)
Q Consensus 50 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (584)
....++..++|-+ ....|+...+.++..+..++.|+|+|.+ |||..++.+.++..+|.++++.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 3446788889865 5567899999999999999999999998 99999999999999999999977
Q ss_pred cCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccch
Q 007932 130 CSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
++...++++-.+.|+|.|... .....++|..|.+ .|.....+.....-+...+++.++..+..+.+|
T Consensus 129 ------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W 195 (599)
T PF06609_consen 129 ------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK------WRGLGLAIASIPFIITTWISPLIAQLFAAHSGW 195 (599)
T ss_pred ------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc------hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCc
Confidence 567779999999999977765 4456689999977 466655555544444444566666666666789
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 007932 210 GLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 210 ~~~f~~~~~~~~~~~~~~~~ 229 (584)
||.|++.++...++++..++
T Consensus 196 Rw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 196 RWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 99999988876666554443
No 108
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.9e-14 Score=145.43 Aligned_cols=154 Identities=18% Similarity=0.110 Sum_probs=129.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.-.+++.+-|+.+-......-.+.+.+++.++++..+++++...+..++.+++++.|++.+|+ |+|+.+++|+.++++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~av 90 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAV 90 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 4445555555555555555666677788999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
|+.+..-+++ ..++..++++.++.|.|.|......+.+++...++++ .++-++..+.
T Consensus 91 g~~lF~pAa~-----------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~ 147 (422)
T COG0738 91 GAALFWPAAS-----------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQA 147 (422)
T ss_pred HHHHHhhhhh-----------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHH
Confidence 9988865542 2568889999999999999999999999999999863 4555667777
Q ss_pred HHhHhHHHHhhhhhhhhc
Q 007932 188 SSFIGALCATLGLVYIQE 205 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~ 205 (584)
...+|+.+||.+++++..
T Consensus 148 fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 148 FNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 889999999999998866
No 109
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.62 E-value=5.4e-14 Score=150.61 Aligned_cols=150 Identities=11% Similarity=0.076 Sum_probs=125.8
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCc
Q 007932 56 TSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTST 135 (584)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (584)
.++++....+.+.+.+++.+++.++.+++|.|.||+ .-.+.+....+...+-.++....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------- 131 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------- 131 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 467888889999999999999999999999999999 86666666666555555444444
Q ss_pred chHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhh------cccch
Q 007932 136 SQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQ------ENLGW 209 (584)
Q Consensus 136 ~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~~~~ 209 (584)
.+.+.+++.|++.|+..++.+|+...+++.++.++ +|+.-+++++...++|.++|.++...+. ...||
T Consensus 132 ~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~------e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW 205 (495)
T KOG2533|consen 132 HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS------ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGW 205 (495)
T ss_pred hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh------hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCc
Confidence 56778999999999999999999999999999988 5999999999999999999999888763 34689
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCC
Q 007932 210 GLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 210 ~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
||.|++.+++.++..++.++..|
T Consensus 206 ~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 206 RWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred eeehhHHHHHHHHHHheEEEEec
Confidence 99999999886666666555444
No 110
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.57 E-value=3e-13 Score=134.86 Aligned_cols=346 Identities=12% Similarity=0.076 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
+..++++.+-.+...-++-+.+ .-+.+++|+|.+.+|+++++..+...+.+++..+++.|+ |..|.+..++++.++|.
T Consensus 14 i~gIvlia~NLR~~itsvgPLL-~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~ 91 (395)
T COG2807 14 LAGIVLIAFNLRPAITSVGPLL-DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHhccchhhhhhhhhH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 3334444444455544444433 356789999999999999999999999999999999998 99999999999988887
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
++=... +...++.+-.+.|.|.+..+...+..+-+.||.+ -+..++.|..+.
T Consensus 92 ~iR~~~---------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl 143 (395)
T COG2807 92 LIRSLG---------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSL 143 (395)
T ss_pred HHHhcc---------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHH
Confidence 766553 3567889999999999999999999999999976 699999999999
Q ss_pred hHhHHHHhhhhhhhhccc-chhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCC
Q 007932 190 FIGALCATLGLVYIQENL-GWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPS 268 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (584)
++|+++++.+...+.++. ||+....+=+...++++++++.-..+.+ .+.. +. +.
T Consensus 144 ~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~--~~~~-~~-------------------~~--- 198 (395)
T COG2807 144 GAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ--AASI-AT-------------------KL--- 198 (395)
T ss_pred HHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc--cccc-cc-------------------cc---
Confidence 999999999999998877 7999888777777777766655322111 1111 00 00
Q ss_pred CccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEE
Q 007932 269 ELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFV 348 (584)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (584)
.++. ..|+ +.........+-+....+|+...+++.++.
T Consensus 199 -------------~~~~---------------------~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili 236 (395)
T COG2807 199 -------------VSVR---------------------KVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILI 236 (395)
T ss_pred -------------cccc---------------------cccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 0000 0010 001111122233456677777788777665
Q ss_pred EecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 007932 349 KQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVR 428 (584)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~ 428 (584)
.+... ....+.+..+..+..+..+.....+..| +.+.| ........++.++..-+-+..
T Consensus 237 ~~G~s---------a~~aG~llsl~~l~~~~~~ll~P~la~R---~~n~r-------~~~~~~~~~~l~G~~G~~~~P-- 295 (395)
T COG2807 237 DRGLS---------AAEAGSLLSLMQLAQLPTALLIPLLARR---SKNQR-------PLVVLALLLMLVGLVGLLLAP-- 295 (395)
T ss_pred HcCCC---------HHHhhhHHHHHHHHHHHHHHHHHHHHHH---hcccc-------hHHHHHHHHHHHHHHHHHHhh--
Confidence 55321 1223344444444444444444334322 11111 123333444444443332321
Q ss_pred hhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCC-chhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 007932 429 RMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSP-EDMQSLGTTFFTSGIGVGNFLNSFLVTL 507 (584)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~gi~~~~~~lg~~lg~~l~~~ 507 (584)
....++| .++.|+|.+..+|...+++.+..+ ++..+.-.|+.+..+.+-..+||.+.+.
T Consensus 296 ----------------~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~ 355 (395)
T COG2807 296 ----------------GQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGF 355 (395)
T ss_pred ----------------hhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhH
Confidence 1112222 478888888888888888876655 5677778888888888888999999988
Q ss_pred hhhhhc
Q 007932 508 VDKVTG 513 (584)
Q Consensus 508 i~~~~~ 513 (584)
+++..+
T Consensus 356 lhDa~g 361 (395)
T COG2807 356 LHDATG 361 (395)
T ss_pred HHHhcC
Confidence 876553
No 111
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=2.5e-13 Score=146.66 Aligned_cols=174 Identities=11% Similarity=0.095 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc---cchhHHHH-HHHHHHHH
Q 007932 32 FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY---IGRFWTFT-LSSLIYVL 107 (584)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~~-~~~~~~~~ 107 (584)
.--+..+..++.+..+..++..|.++.+|+++..+|.+..+.-+.-.+.-|+.|+++||. .||||..+ ++.+.+++
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 334566667777777888899999999999999999999999999999999999999972 38877665 45567777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.+++.... ... .......+.+.-++..++.......-.++.+|..++.+ +|++..++...
T Consensus 93 ~~~llf~~p---~~s-----------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~ 153 (460)
T PRK11462 93 VCVLAYSTP---DLS-----------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFV 153 (460)
T ss_pred HHHHHHhCC---CCC-----------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHH
Confidence 766555431 100 01223345555566788888888888899999998765 69999999999
Q ss_pred HHhHhHHHHhhhhhhhhccc-------chhHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENL-------GWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~-------~~~~~f~~~~~~~~~~~ 224 (584)
+.++|..+++.+...+.+.. +|+....+.++..++..
T Consensus 154 ~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 154 LATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 99999888877765544332 45655544444433333
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.57 E-value=4.1e-14 Score=146.91 Aligned_cols=387 Identities=11% Similarity=-0.021 Sum_probs=214.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH-
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV- 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~- 106 (584)
+..+.+....++..+..-...++.+.|++++.|+|.+++|.+.+...+...+.+|+.|.++||+ |.||-+++.+.+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4566666666666666677789999999998999999999999999999999999999999998 97776554433222
Q ss_pred -HHHHHH-HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 107 -LGMILL-TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 107 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+.... .+..-+. .+ +.++.++.++..+......... .|.+-++.. ++.+.-+|-
T Consensus 86 l~~pff~~v~~pll~----------------~n---~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~s---r~~~feYG~ 142 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQ----------------SN---FWLGAIIGGIYLGLVFNAGVPL-SEAYAERVS---RRNGFEYGR 142 (412)
T ss_dssp TCHHHHHHTHHHHHH----------------TT----HHHHHHTTTTTTTTTTTHHHH-HHHHHHHHH---HHHSS-HHH
T ss_pred HHHHHHHHHHHHHHH----------------HH---HHHHHHHHHHHHHHHHcccchH-HHHHHHHHH---HHhcCCcch
Confidence 222222 2211000 11 3333334344444333222221 133322211 024455566
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCC
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLP 264 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (584)
..+...+|.+++..++|.+.+ .+....|++.....++..++.+..++..+++.+..
T Consensus 143 ~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~----------------------- 198 (412)
T PF01306_consen 143 ARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA----------------------- 198 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-----------------------
T ss_pred HHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-----------------------
Confidence 677788999999999999876 45677888766554444444333332111110000
Q ss_pred CCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhh-hccc
Q 007932 265 DNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTI-WAQI 343 (584)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 343 (584)
+... + +.++.+..+-. +.-+.|+++....+.......+.. -+|+
T Consensus 199 ~~~~---~---------------~~~~~~~~~~~-----------------~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf 243 (412)
T PF01306_consen 199 DALG---A---------------KKDKVSLKDVL-----------------SLFKMRNFWFFVLFVIGVAAIYDVFDQQF 243 (412)
T ss_dssp TTSS---S---------------------HHHHH-----------------HHTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc---c---------------CCCCCcHHHHH-----------------HHhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 00000000000 011234555444444444333333 3444
Q ss_pred cceEEEecccccCCCCCCcccCcc---ccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 007932 344 NTLFVKQGTTLNRSLSPSFRIPAA---SLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIA 420 (584)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~ 420 (584)
+.++....... ...+. .+.++..+.-.+...+..++++|.+ +...+.++.+++++=..
T Consensus 244 ~~y~~~~f~~~--------~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig-----------~k~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 244 PIYFASFFQSA--------GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG-----------AKNLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHTSSSH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccc--------ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC-----------hHhHHHHHHHHHHHHHH
Confidence 33332111000 11112 2223333333344334444443333 33456667666666666
Q ss_pred HHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHH-HHHHhHHHH
Q 007932 421 IAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFF-TSGIGVGNF 499 (584)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~-~~~~~lg~~ 499 (584)
..+.. .+++++.+.-.+.++-..+......-|+.+.+|++..++...+. ++..++|..
T Consensus 305 ~~~~~---------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~ 363 (412)
T PF01306_consen 305 GSGFA---------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGII 363 (412)
T ss_dssp HHHT-----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHH
T ss_pred HHhhh---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHH
Confidence 66555 46677888888999999899999999999999999999999885 588888888
Q ss_pred HHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhh
Q 007932 500 LNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASS 553 (584)
Q Consensus 500 lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~ 553 (584)
+.+.+.+.+.+.. ++...|++++.+.+...++-.+..+
T Consensus 364 i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 364 ILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeeec
Confidence 8888888876533 3345688888777666655555443
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.52 E-value=8.7e-12 Score=130.95 Aligned_cols=369 Identities=14% Similarity=0.119 Sum_probs=224.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc---cchhHH-HHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY---IGRFWT-FTLSS 102 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~-~~~~~ 102 (584)
.|+-+.--...+..+..+-.+..++.-|.++..|+++..+|.+..+.-+.-.+.-|+.|.+.||. .||+|- ++++.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 34445556667777777778888999999999999999999999999999999999999999983 276654 55566
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
+.+++...++..+.+. + ......-.++.-.+.+++.....-.-.++.++..++.+ +|.+..
T Consensus 91 ip~~i~~~l~F~~p~~-~-------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~ 151 (467)
T COG2211 91 IPFAIVAVLLFITPDF-S-------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLT 151 (467)
T ss_pred HHHHHHHHHHHcCCCc-c-------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHH
Confidence 7778777777766320 0 11334456666778899999999899999999998765 799999
Q ss_pred eeehhHHhHhHHHHhhhhhhhhc-------ccchhHHHHHHHHHHHHHHHHHHHh-CCceeecCCCCCChhhhhHHHHHH
Q 007932 183 NWWMFSSFIGALCATLGLVYIQE-------NLGWGLGYGIPTAGLLFSLVIFYIG-SPIYRHKIRKTKSPARDLIRVPIA 254 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 254 (584)
++.....++|..+...+.+.+.. ..||+..-.+.+++..+..+..+.. +++..+..+.+ +.
T Consensus 152 s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~-~~---------- 220 (467)
T COG2211 152 SWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTK-TG---------- 220 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCc-cc----------
Confidence 99999999998877666655543 2356555554444443443333332 22211111111 00
Q ss_pred HHhhccccCCCCCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhh
Q 007932 255 AFRNRKIQLPDNPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTL 334 (584)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (584)
...++.+..... ...|.++..+...+...
T Consensus 221 -----------------------------------~~~~~~~~~~~~----------------~~Nrp~~~~l~~~l~~~ 249 (467)
T COG2211 221 -----------------------------------VKLKLKDSFLLI----------------FKNRPLLLLLLMNLLLF 249 (467)
T ss_pred -----------------------------------ccccHHHHHHHH----------------HccchHHHHHHHHHHHH
Confidence 000000000000 01122222222222222
Q ss_pred hhhhhhccccceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHH
Q 007932 335 IPSTIWAQINTLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVI 414 (584)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l 414 (584)
+...+......++.... ++.. ...............+++.++..++..++++| +....+.++
T Consensus 250 ~~~~i~~s~~~yy~~y~--lg~~-----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----------~~~~~~~~~ 311 (467)
T COG2211 250 IAFNIRGSIMVYYVTYV--LGDP-----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----------KLFLIGLLL 311 (467)
T ss_pred HHHHHHhhhhheeEEEE--cCCh-----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----------HHHHHHHHH
Confidence 22222222222222221 1110 11111222223333333344444443333333 446777777
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCC-------chhHHHHH
Q 007932 415 QVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSP-------EDMQSLGT 487 (584)
Q Consensus 415 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~ 487 (584)
..++.+...+.. ..+.++.+...++.+++.+..++..++++.|.+. .+..|...
T Consensus 312 ~~i~~~~~~f~~-------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~ 372 (467)
T COG2211 312 LAVGYLLLYFTP-------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVY 372 (467)
T ss_pred HHHHHHHHHhhc-------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHH
Confidence 777776666551 1234455556688889999999999999987754 35678899
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhhhc
Q 007932 488 TFFTSGIGVGNFLNSFLVTLVDKVTG 513 (584)
Q Consensus 488 gi~~~~~~lg~~lg~~l~~~i~~~~~ 513 (584)
|.+.++.-+|..++..+.+.+....+
T Consensus 373 s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 373 SGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999988775443
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.46 E-value=1.5e-12 Score=137.78 Aligned_cols=176 Identities=14% Similarity=0.022 Sum_probs=133.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+++..+............++.+..+.|.|+++++|.++.+.+.+.+...++..++.+++|+++||+ |||+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 334444444444555555566667889999999999999999888887788888999999999998 9999888776655
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.+....+... .+.+.+.+.+++.+++.|...+..+.+..|.+|++ ++++.+++
T Consensus 293 ~~~~~~~~~~--------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~~~ 345 (393)
T PRK15011 293 VCFYAGMLMA--------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATTLY 345 (393)
T ss_pred HHHHHHHHHH--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHHHH
Confidence 5544333332 23555667777777777766666677788888744 78999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+...++|..++|.++|.+.+.+||+..|.+.++..+++.+..+.
T Consensus 346 ~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 346 TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999899999998877776666655544
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.45 E-value=1.2e-12 Score=142.77 Aligned_cols=182 Identities=13% Similarity=0.100 Sum_probs=132.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+++.+.......++....+|++..++|.|+++.+|++..+.++......++..++.+++|+++||+ |||++++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444455667788999999999999989999988888888888889999999999999999 9999998887654
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.+++..... ..+...+++++++.+++.+...+....++.|.+|++ .|+++.++.
T Consensus 327 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~------~Rg~~~g~~ 383 (490)
T PRK10642 327 FVLAIPAFILIN-----------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH------IRYSALAAA 383 (490)
T ss_pred HHHHHHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc------cchHHHHHH
Confidence 444333222110 133556778888888877766677778888999988 599999975
Q ss_pred hhHHhHhHHHHhhhhhhhhccc-chhHHHHHHHHHHHHHHHHHHHhC
Q 007932 186 MFSSFIGALCATLGLVYIQENL-GWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
+....+++.++|.+.+++.+.. +|+.++++..+..++.++..++.+
T Consensus 384 ~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~p 430 (490)
T PRK10642 384 FNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMK 430 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 5556677788999999987754 467666655555445544444443
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=8e-14 Score=133.35 Aligned_cols=134 Identities=10% Similarity=0.123 Sum_probs=112.2
Q ss_pred HHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCc
Q 007932 51 LVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGIC 130 (584)
Q Consensus 51 ~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (584)
+.++...+.+++.++..++.+.|+.-..+.+.++|++.||.+|-|..-++-+.+..+|-++.+....
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi------------- 132 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI------------- 132 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------
Confidence 4567777788888888899999999999999999999999879887766666666677666654321
Q ss_pred CCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhccc
Q 007932 131 SKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENL 207 (584)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 207 (584)
...+|++..+|++.|+|.-....+.+.+..-+|..+| .+.+++++..+..+|..+-..+.+++.++.
T Consensus 133 ----~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 133 ----SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred ----HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 1568999999999999998888999999999999984 999999999999999988878888887654
No 117
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.5e-12 Score=130.91 Aligned_cols=179 Identities=19% Similarity=0.205 Sum_probs=149.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhccc-chhHHH-HHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYI-GRFWTF-TLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-Grk~~~-~~~~~~~ 105 (584)
|.+|+++++.++..+..|++..+.|+|+++..|+|..++++..+.+..+...++++.||++||++ |||... ++.+++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999987 666544 4444455
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.+.+..+. ..+..+..++.+.+|+...+.+-.+-....|..|.+ --|++.|..
T Consensus 332 ~~~~~~~w~~~------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~------AaGtA~Gf~ 387 (448)
T COG2271 332 TASLVLYWLAP------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK------AAGTATGFV 387 (448)
T ss_pred HHHHHHHHcCC------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh------hccchhchh
Confidence 55555555442 135678888888889888887777778888998887 489999999
Q ss_pred hhHHhH-hHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFSSFI-GALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~~~~-g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
..+.-+ |+..+....+++.+.+||...|.+..+..+++.+++...
T Consensus 388 Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 388 GLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 999988 999999999999999999999998777766666555443
No 118
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.40 E-value=9.5e-11 Score=126.11 Aligned_cols=84 Identities=19% Similarity=0.208 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccch
Q 007932 451 WLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHL 530 (584)
Q Consensus 451 ~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~ 530 (584)
-+.+..++.|+..+...+..-++..++.|++..+...|++.+....++++||.+.+.+.+.++ +.
T Consensus 382 ~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---------------~~ 446 (477)
T PF11700_consen 382 EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---------------SQ 446 (477)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------Cc
Confidence 345556788999999999999999999999999999999999999999999999999876543 22
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 007932 531 DYYYGFLMVISILNLGAFF 549 (584)
Q Consensus 531 ~~~f~~~~~~~~~~~l~~~ 549 (584)
.+.+..+.++.+++++++.
T Consensus 447 r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 447 RYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 3446666666666655443
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=5.4e-12 Score=131.71 Aligned_cols=170 Identities=14% Similarity=0.036 Sum_probs=134.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+......+...+.......+.+.|. +++|.+..+.+.+...+.++..++.++.|+++||+ |||+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3445555555555555555556666665 56889988899999999999999999999999998 999999999888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.+++....+ .+...+.+..++.+++.|...+..++++.|.+|++ +|+++.++.+.
T Consensus 283 ~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~g~~~~ 338 (377)
T TIGR00890 283 GMAAMLFIPM------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA------NSAANYGFLYT 338 (377)
T ss_pred HHHHHHHccc------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh------hhhhHhHHHHH
Confidence 8776665421 12333455667788888888888888999999988 59999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~ 223 (584)
..++|..++|.+.+++.+..||++.|.+.++..+++
T Consensus 339 ~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 339 AKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999999998877655544
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.36 E-value=2.7e-10 Score=116.72 Aligned_cols=379 Identities=13% Similarity=0.090 Sum_probs=212.3
Q ss_pred hhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc-----hhHHHHH-HHHHHHHHHHHHHHhhhccccCCCCCCC
Q 007932 55 LTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG-----RFWTFTL-SSLIYVLGMILLTMAASLKFMKPTCTNG 128 (584)
Q Consensus 55 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rk~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (584)
+..++++...-.+..+....+.+. ..+..|+.+|+. + ||.-+++ |.++++.+..+..++.-. +.++....
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~--l~~~~~~~ 81 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLL--LAESGQQS 81 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHH--Hccccccc
Confidence 346788888888888887777665 588999999998 7 6665554 455666666555554311 11100000
Q ss_pred CcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccc
Q 007932 129 ICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
+.+.........++..+.|+|.+....+..++++|..|++ +|+++.++.+.+.-+|.+++..+.+.+.+.++
T Consensus 82 --~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 82 --SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred --ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh------hhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 1111222234445555678898888999999999999998 69999999999999999999999998887766
Q ss_pred hhHHHH-HH---HHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCCCCCCccccccccccccccc
Q 007932 209 WGLGYG-IP---TAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPDNPSELHEFDTQDYIRSGKR 284 (584)
Q Consensus 209 ~~~~f~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (584)
..-..- +. .+...+..+..+-..++.++..+..
T Consensus 154 ~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~------------------------------------------- 190 (403)
T PF03209_consen 154 PERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAA------------------------------------------- 190 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCC-------------------------------------------
Confidence 332222 22 2222222222222111111110000
Q ss_pred cccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHHHHHHHhhhhhhhhccccceEEEecccccCCCCCCccc
Q 007932 285 QVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMALIWLVTLIPSTIWAQINTLFVKQGTTLNRSLSPSFRI 364 (584)
Q Consensus 285 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (584)
.+++.++.+..... .. ....+++ +.+.......+........ .+-...+ +++.
T Consensus 191 ---~~~~~~f~~a~~~~----------~~---~~~a~~f---~~fl~l~t~a~~~QD~iLE--Pygg~Vf------gmsv 243 (403)
T PF03209_consen 191 ---ERPRPPFREAWRQV----------WA---SPQARRF---FVFLFLGTLAFFMQDVILE--PYGGEVF------GMSV 243 (403)
T ss_pred ---CCCCccHHHHHHHH----------Hh---CCChhHH---HHHHHHHHHHHHhhHHHcC--CchhHHc------CCCH
Confidence 00000111110000 00 0011222 2222222221111111111 1111011 1111
Q ss_pred -CccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 007932 365 -PAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQ 443 (584)
Q Consensus 365 -~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (584)
....++..-..+.+++.....+... +|. .+.+....|+....+++.......
T Consensus 244 ~eTT~Lta~~~~G~L~G~~~~g~~l~---~~~-------~~~~~a~~G~~~~~~~f~lii~a~----------------- 296 (403)
T PF03209_consen 244 GETTRLTAFWGGGTLLGMLLAGFLLS---RRL-------GKKRTAALGCLLGALAFALIILAG----------------- 296 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-------CchHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 2234444445555555544444432 221 233445567766666665544431
Q ss_pred ccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCC
Q 007932 444 IVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGD 523 (584)
Q Consensus 444 ~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~ 523 (584)
...+.+.+-...+++|++.+.......+...+..+++..|..+|.+...+.++..++.++.+.+-+.... ..+
T Consensus 297 -~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~------~~~ 369 (403)
T PF03209_consen 297 -PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA------LFG 369 (403)
T ss_pred -hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcc
Confidence 0124556777889999999999999999999999999999999999999999999999999888765531 111
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHH
Q 007932 524 NLNDCHLDYYYGFLMVISILNLGAFF 549 (584)
Q Consensus 524 ~~~~~~~~~~f~~~~~~~~~~~l~~~ 549 (584)
+.....|...|.+-++..++++.+..
T Consensus 370 ~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 370 NSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 11223555567666666666654433
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.35 E-value=5.8e-12 Score=136.56 Aligned_cols=176 Identities=12% Similarity=0.074 Sum_probs=134.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+|.+.+..++....+++...++|.|+++++|+|..++++......++..++.+++|+++||+ |||+.+++...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577788888888888889999999999999999999999999999999999999999999999 999887765544443
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++.+.. ..+.....+.+++.|+..............|.+|++ .++++.++.+.
T Consensus 337 ~~~~~~~~~------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~------~~g~a~gi~~~ 392 (467)
T PRK09556 337 IFTLGVYQH------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK------AIGVANGIKGT 392 (467)
T ss_pred HHHHHHHHh------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh------hHHHHHHHHHH
Confidence 332222221 023444556677777554333333335667999987 59999999999
Q ss_pred HHhH-hHHHHhhhhhhhhc------------ccchhHHHHHHHHHHHHHHHHHH
Q 007932 188 SSFI-GALCATLGLVYIQE------------NLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 188 ~~~~-g~~~g~~~~~~l~~------------~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
..++ |+.++|.+.|++.+ ..+|+..|++..+..+++.+...
T Consensus 393 ~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 393 FAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 9887 77999999999998 57899999887776666655544
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.35 E-value=7.7e-12 Score=131.36 Aligned_cols=171 Identities=18% Similarity=0.099 Sum_probs=133.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
++++.++......++.....+...++++.|+++++|.+..+.+.......++..++.++.|+++||+ |||+.+.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~ 294 (394)
T TIGR00883 216 KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVL 294 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHH
Confidence 3334567777778888888888899999999889999999999999999999999999999999999 999988765544
Q ss_pred HHHHH-HHHH-HhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 105 YVLGM-ILLT-MAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 105 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
..+.. .... ... ..+.+.+....++.+++.+...+...+++.|.+|++ .|++++
T Consensus 295 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~~~~~ 350 (394)
T TIGR00883 295 AALLAVPLLMALLD------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE------VRYTGA 350 (394)
T ss_pred HHHHHHHHHHHHhc------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc------ceeeEe
Confidence 44332 2222 211 123555667777888888888899999999999987 589999
Q ss_pred eee-hhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHH
Q 007932 183 NWW-MFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGL 220 (584)
Q Consensus 183 ~~~-~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~ 220 (584)
+.. +.+..+|..++|.+++++.++.| |+..++...+..
T Consensus 351 ~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 351 SLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 984 45567889899999999999888 887766555433
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.35 E-value=7.8e-12 Score=132.53 Aligned_cols=173 Identities=12% Similarity=0.057 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAA 116 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~ 116 (584)
..+..+++..+..+++.|+.+ .|.+ +.+.....+.++..++.++.|++.||+ ||||.+.++.++..++.+++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~- 299 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh-
Confidence 334455666677788888764 4653 445666778888889999999999998 99999998888888777666654
Q ss_pred hccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHH
Q 007932 117 SLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCA 196 (584)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 196 (584)
++.+.+.+.+++.|++.+...+.......|.+|++ +|+++.++++...++|..++
T Consensus 300 -------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 300 -------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred -------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHH
Confidence 34556777888899999988888888888888877 59999999999999999999
Q ss_pred hhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCC
Q 007932 197 TLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIR 239 (584)
Q Consensus 197 ~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (584)
+.+.|++.+..||+..|++.++..+++.+..+...++.+++.|
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVP 397 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence 9999999998999999998888777776666665554444433
No 124
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.34 E-value=1.3e-11 Score=129.27 Aligned_cols=171 Identities=13% Similarity=-0.016 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
.+.+....++...........++.|+++++|.++.+.+++.+...+...++.+++|++.||+ |||+++.++.+...++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 33333444444444455566778899889999999999888877777788889999999999 99999988876655554
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
...... ++.+.+.+.+++.|++.|...+....+..|..|++ ++++.++++...
T Consensus 280 ~~~~~~--------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 332 (375)
T TIGR00899 280 TGLAAD--------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTG 332 (375)
T ss_pred HHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHH
Confidence 444333 34556677788888888888888888888988754 568999999999
Q ss_pred hHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 190 FIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
++|..++|.+.+++.+..||+..|++.++..+++.+...
T Consensus 333 ~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 333 RVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999989999999988877666655543
No 125
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.33 E-value=3.2e-12 Score=134.42 Aligned_cols=195 Identities=12% Similarity=0.030 Sum_probs=150.9
Q ss_pred CCCCccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccch
Q 007932 16 GRPVLSSKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTS-QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGR 94 (584)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr 94 (584)
+...++..+.+||.+++.....+...+.++.+.+..-+|+++ +.+.+.+..|+++++..++..+..+..|+...|. |.
T Consensus 22 ~~~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~ 100 (488)
T KOG2325|consen 22 SLSPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GS 100 (488)
T ss_pred ccccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CC
Confidence 344555667899999999999999999988888888889875 5788889999999999999999999999999998 75
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChh
Q 007932 95 -FWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPY 173 (584)
Q Consensus 95 -k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~ 173 (584)
|+-++.+.++.++|.++.......|+ ...+.++++|++.|+|.|.. +..-+++++....++
T Consensus 101 ~k~Pli~s~ii~~~g~llY~~l~~~~~---------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d-- 162 (488)
T KOG2325|consen 101 VKKPLIVSFLIAIIGNLLYLALAYVPN---------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED-- 162 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhccc---------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc--
Confidence 88899999999999999955544332 36788999999999998875 455677788666663
Q ss_pred hhcccceeeeeehhHHhHhHHHHhhhhhhhhc----c---------cchhHHHHHHHHHHHHHHHHHHHhCCc
Q 007932 174 ERNLKVSFFNWWMFSSFIGALCATLGLVYIQE----N---------LGWGLGYGIPTAGLLFSLVIFYIGSPI 233 (584)
Q Consensus 174 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----~---------~~~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (584)
|.++++....+..+|..+||.+...+.. . +-+..+-|+.+++.++..++++...++
T Consensus 163 ----R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 163 ----RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ----hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 8888888777777777777776654421 1 114456677777766776666655443
No 126
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=1.4e-11 Score=130.60 Aligned_cols=172 Identities=12% Similarity=0.073 Sum_probs=135.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.++...+..++.....+++..++|.|+++.+|+|+.+.+...+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4456666666666777788889999999999999999999999999999999999999999998 999998887766665
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..+.... ++...+.+..++.|++.+...+...+...|..|.+ +++..++...
T Consensus 284 ~~~~~~~~--------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~ 336 (394)
T PRK03699 284 LMYLFVNT--------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILT 336 (394)
T ss_pred HHHHHHHc--------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHH
Confidence 54444433 23344555667778887777787777777776644 4556777788
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 227 (584)
..++|..++|.+.|++.+..|++..++..++..+++.+..
T Consensus 337 ~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 337 CGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 8899999999999999999999999887777665554443
No 127
>PRK09952 shikimate transporter; Provisional
Probab=99.32 E-value=1.8e-11 Score=131.67 Aligned_cols=182 Identities=17% Similarity=0.088 Sum_probs=130.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+++.........++....+|...++.+.|+++.+|.+......+.........++.++.|+++||+ ||||+++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 334444444556677888899999999999999999887665555566677788889999999998 9999998887665
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.+.+..... .......+.+..++.+++.+...+..+++++|.+|.+ .|+++.++.
T Consensus 327 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~~ 384 (438)
T PRK09952 327 TLSAFPFFMALE----------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGVG 384 (438)
T ss_pred HHHHHHHHHHHH----------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhHH
Confidence 554433333210 0022334445556667887877888899999999987 588888875
Q ss_pred hhH-HhHhHHHHhhhhhhhhccc--chhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFS-SFIGALCATLGLVYIQENL--GWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~-~~~g~~~g~~~~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+.. ..+|+.++|.+.+++.+.. +|..++.+.++..+++.+..+..
T Consensus 385 ~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 385 YQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 444 4589999999999997743 48888877777666666555443
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.31 E-value=2.4e-11 Score=125.30 Aligned_cols=173 Identities=18% Similarity=0.236 Sum_probs=151.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhH-HHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFW-TFTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-~~~~~~~~~~ 106 (584)
|.++......+...........+.+.|..+.+|.+..+.+.......++..++.++.|++.||+ |||+ .+.++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 3445556667777777788888888898888899999999999999999999999999999999 9999 9999999888
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+.+... .+.+.+.+..++.|++.+...+...+++.|.+|++ +|++.++..+
T Consensus 254 i~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 307 (352)
T cd06174 254 LGLLLLALA--------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPE------ARGTASGLFN 307 (352)
T ss_pred HHHHHHHHh--------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH------HHHHHHHHHH
Confidence 888877765 34667888899999999999999999999999987 5999999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 227 (584)
...++|..+++.+.+.+.+..+|+..|.+.++..+++.+..
T Consensus 308 ~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 308 TFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999999988999999998888766665544
No 129
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.30 E-value=7.6e-11 Score=128.73 Aligned_cols=149 Identities=16% Similarity=0.105 Sum_probs=116.2
Q ss_pred HHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007932 46 GIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTC 125 (584)
Q Consensus 46 ~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (584)
....++|.|+++++|.+..+.+++.+...++..++.+++|+++||+ |||++++++.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567889999889999999999999999999999999999999998 999998888766555544333321
Q ss_pred CCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 126 TNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
..+.+.+.+..++.+.......+..++++.|.+|++ +|++.+++++...++|..+||.++|++.+
T Consensus 363 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 363 ---------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE------QRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred ---------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH------HhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 123333444444444333334567778889999987 59999999999999999999999999999
Q ss_pred ccchhHHHHHHHHH
Q 007932 206 NLGWGLGYGIPTAG 219 (584)
Q Consensus 206 ~~~~~~~f~~~~~~ 219 (584)
.+||+..+.+.+..
T Consensus 428 ~~g~~~~~~~~~~~ 441 (496)
T PRK03893 428 RLDLGTALASLSFS 441 (496)
T ss_pred cCChHHHHHHHHHH
Confidence 99998877655443
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.29 E-value=4.4e-11 Score=126.95 Aligned_cols=166 Identities=14% Similarity=0.074 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchh---hhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTV---SSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLT 113 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~ 113 (584)
.+........+.+..+.|..+..+.... ..+.+.....++..++.+..|+++||+ |||+.+.++.++..++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 3444445555667777887765442221 234555666778888899999999999 999999998887777766655
Q ss_pred HhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhH
Q 007932 114 MAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGA 193 (584)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 193 (584)
.. .+.+.+.+.+++.|++.+...+...+.+.+..|++ ++++.+++++...++|.
T Consensus 307 ~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~ 360 (408)
T PRK09874 307 FV--------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGN 360 (408)
T ss_pred Hh--------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHH
Confidence 44 34566778888999999999999999988888877 58999999999999999
Q ss_pred HHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 194 LCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 194 ~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
.+||.++|++.+..||+..|++.++..+++.+..+.
T Consensus 361 ~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 361 VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888877766655544
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.29 E-value=2.3e-11 Score=136.78 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHH
Q 007932 69 NVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYII 148 (584)
Q Consensus 69 ~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (584)
...+..++..++.+++|+++||+ |||++++++.++.+++.+++++.. +...+++.+++.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~--------------------s~~~ll~~~~l~ 658 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN--------------------SESAMIALLCLF 658 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 34556688889999999999998 999999999999888888777652 344566777788
Q ss_pred HHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 149 AIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 149 gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
++..++..+...++++|++|++ .|++++++.+...++|+++||++++.+... +...+|++.++..+++.++.+
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~------~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSD------KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 8887888888999999999988 699999999999999999999999988764 456677777766666555544
Q ss_pred Hh
Q 007932 229 IG 230 (584)
Q Consensus 229 ~~ 230 (584)
+.
T Consensus 732 ~L 733 (742)
T TIGR01299 732 KL 733 (742)
T ss_pred hC
Confidence 43
No 132
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.28 E-value=3.7e-11 Score=128.35 Aligned_cols=172 Identities=15% Similarity=0.061 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQL---HEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+..........+.......+.|+.+.+ +.+..+.+.+.+...++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 226 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~ 304 (420)
T PRK09528 226 WFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAV 304 (420)
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHH
Confidence 33333333444444444455677765543 56667788899989999999999999999999 999999999888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee-eh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW-WM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~ 186 (584)
+.++++++ .+.+.+++.+++.+++.+...+....++.|.+|++ .+++..+. ++
T Consensus 305 ~~~l~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~ 358 (420)
T PRK09528 305 RIIGSGFA--------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQ 358 (420)
T ss_pred HHHHHHhc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHH
Confidence 87777765 34666778888999888887777788899999877 47777665 67
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+..++|.+++|.+.|++.+.+||+..|.+.++..++..++.+.
T Consensus 359 ~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 359 FAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999877765555444443
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.28 E-value=5.2e-11 Score=125.62 Aligned_cols=169 Identities=7% Similarity=-0.148 Sum_probs=143.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++......++...+++...++.+.|+++ +|.++.+.+...+...++..+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 556777777788888888889999999965 899999999999998999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh-
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM- 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 186 (584)
..++++.. ++.+.+++..++.|+..+...+....++.+. |++ +++++.+.++
T Consensus 283 ~~~~~~~~--------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~------~~~~~q~~~~~ 335 (382)
T TIGR00902 283 RWAIIGAI--------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS------EIAKLQALYNA 335 (382)
T ss_pred HHHHHHhH--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh------hHHHHHHHHHH
Confidence 98888765 4577888899999999999999999999987 766 4788888875
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
....+|..+|+.++|++.++.|+ ..|++.++..+++.++
T Consensus 336 ~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 336 LAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 46789999999999999999886 5677666665555443
No 134
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.26 E-value=3.6e-11 Score=128.40 Aligned_cols=179 Identities=11% Similarity=0.035 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--------hhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHED--------TVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
++.++...++..........+.+.|+.+ .|.+ ....+...+...+...++.++.|+++||+ |||++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~ 287 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLS 287 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHH
Confidence 3445555555555555556777788754 4544 35668888888999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.++..++..++..... +..+.+.+++..++.|++.+...+....++.|.+|++ +|+++
T Consensus 288 ~~~~~v~~~l~~~~~~----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~~ 345 (418)
T TIGR00889 288 LVAWALRFGFFAYGDP----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRASA 345 (418)
T ss_pred HHHHHHHHHHHHHcCc----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHH
Confidence 9988887766665310 0012456777889999999988899899999999988 59999
Q ss_pred eeeeh-hHHhHhHHHHhhhhhhhhcc------cchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 182 FNWWM-FSSFIGALCATLGLVYIQEN------LGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 182 ~~~~~-~~~~~g~~~g~~~~~~l~~~------~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
+++.+ ....+|..+||.++|++.++ +||+..|.+.++..++..+..+...+
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 56789999999999999886 46999998887775555555544443
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.26 E-value=1e-10 Score=123.86 Aligned_cols=176 Identities=13% Similarity=0.026 Sum_probs=136.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+.+....++..++++++..++|.|+.+ .|.+..+.+...+.+.++..++.++.|++.||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 445666666667778888999999999975 799999999999999999999999999999998 999999988877777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++.... .+.... ..++.|++.+...|.......+.+++++ .+++.++..+.
T Consensus 283 ~~~~~~~~~-------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~ 336 (393)
T PRK09705 283 GFCGFIWLP-------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQG 336 (393)
T ss_pred HHHHHHHcc-------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHH
Confidence 765544321 111112 2245678888888877777778886543 58999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHHHhC
Q 007932 188 SSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
..++++.++|.+.|++.+..| |...|++.++..++..++.....
T Consensus 337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999876 77888877766665555544443
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.26 E-value=1.1e-10 Score=123.33 Aligned_cols=174 Identities=12% Similarity=-0.061 Sum_probs=133.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
++......++.....++..++.+.|+.+..|.+..+.+++.....++..++.++.|+++||+ |||++. ++..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 44444555555666666777888888888999999999999999999999999999999998 988654 4444444443
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
.+..... .+.+.+.+..++.|++.+...+..++.+.+..|+ .|++++++++...
T Consensus 285 ~~l~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~ 338 (390)
T PRK03545 285 LLLLPAA-------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSGIF 338 (390)
T ss_pred HHHHHHh-------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHHHH
Confidence 3332221 3455667777788888877777777888887663 3789999999999
Q ss_pred hHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhC
Q 007932 190 FIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
++|..+||.++|++.+++|++..|++.+.+.+++.+..+...
T Consensus 339 ~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 339 NIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999988887777766655543
No 137
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=1.1e-11 Score=109.89 Aligned_cols=133 Identities=15% Similarity=0.180 Sum_probs=113.9
Q ss_pred HHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHH
Q 007932 70 VNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIA 149 (584)
Q Consensus 70 ~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 149 (584)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++.+++... .+.+.+.+.+++.|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g 62 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS--------------------SNITVLIIARFLQG 62 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHH
Confidence 4456778889999999999999 99999999998888887777665 34667888899999
Q ss_pred HhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 150 IGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 150 i~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
++.+...+...+++.|.+|++ +|++..++.+...++|..++|.+.+++.+..+|++.|++.+...++..+..+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988 59999999999999999999999999998889999998877765555554444
No 138
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.24 E-value=5.9e-11 Score=128.12 Aligned_cols=177 Identities=14% Similarity=0.123 Sum_probs=124.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccch--hHHH-HHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGR--FWTF-TLSSLI 104 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--k~~~-~~~~~~ 104 (584)
+.+|...+..++.....++...++|.|++++.|++..+++.....+.++..++.+++|+++||+ ++ |+.. +....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 5567777777788888888999999999998999999999888888899999999999999997 54 3322 222223
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+.+.... ..+.....++.++.|.+..........+..|.+|++ .|++++++
T Consensus 332 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~ 387 (452)
T PRK11273 332 VTIATIVYWLNP------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGF 387 (452)
T ss_pred HHHHHHHHHHhc------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh------hhhhHHHH
Confidence 333333222211 022333344444455443332233345567999987 59999999
Q ss_pred ehhHHhHhHHH-HhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 185 WMFSSFIGALC-ATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 185 ~~~~~~~g~~~-g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
.+...++|+.+ +|.+.|++.+..||+..|++.+...+++.+....
T Consensus 388 ~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 388 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99988898765 7999999999999999998877766666555443
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.24 E-value=3.9e-11 Score=128.09 Aligned_cols=162 Identities=11% Similarity=-0.052 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007932 44 FYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKP 123 (584)
Q Consensus 44 ~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (584)
.+++..++|.|+++.+|.++.+.+++.+...++..++.++.|++.||. ++++.+..+.++..++.+++...
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 456677889999888999999999999999999999999999999997 88888888887777776666543
Q ss_pred CCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhh
Q 007932 124 TCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYI 203 (584)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 203 (584)
++.+...++.++.|++.+...+...+++.|.+|++ .|++++++++...++|..+||.+.|++
T Consensus 310 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~l~G~l 371 (417)
T PRK10489 310 ------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE------MLGRINGLWTAQNVTGDAIGAALLGGL 371 (417)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH------HHHHHHHHHHHHHhhhHhHHHHHHHHH
Confidence 34555677778888888877777888899999977 599999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 204 QENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 204 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
.+..|++..+.+.++..++..++.....+
T Consensus 372 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 372 GAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99989888888777665554444444333
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.23 E-value=9.7e-11 Score=122.74 Aligned_cols=177 Identities=11% Similarity=-0.018 Sum_probs=130.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHH-HHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWT-FTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~-~~~~~~~~~ 106 (584)
+.++..+...++.....+.+..+.+.|+++.+|.+..+.+++.....++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 5567777788888888888999999999999999999999999999999999999999999998 98861 111111111
Q ss_pred HHH---HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 107 LGM---ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 107 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
++. .+...... ...+.........+.+.+.+ ..+...+++.|.+|++ .|+++++
T Consensus 294 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~g~~~~ 350 (399)
T TIGR00893 294 IAGLVLSLLMFATN----------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGN------IAGLTGG 350 (399)
T ss_pred HHHHHHHHHHHHhc----------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChh------HHHHHHH
Confidence 111 11111110 00123333333333344444 7889999999999988 5999999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~ 228 (584)
+.+...++|..++|.+.+++.+..| |+..|.+.++..+++.+..+
T Consensus 351 ~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 351 LINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888 99998887776666555443
No 141
>PRK12382 putative transporter; Provisional
Probab=99.23 E-value=6.9e-11 Score=125.02 Aligned_cols=163 Identities=12% Similarity=0.119 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAA 116 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~ 116 (584)
.......+..+..+.+.|+++ .+.+. .+.....+.++..+++++.|++.||+ ||||.+.++..+..++.++....
T Consensus 225 ~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~- 299 (392)
T PRK12382 225 LALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA- 299 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc-
Confidence 334445566667777888764 46543 45566667778889999999999998 99999999988888887766554
Q ss_pred hccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHH
Q 007932 117 SLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCA 196 (584)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 196 (584)
++.+.+.+..++.|++.+...+...+.+.|.+|++ +|+++.++++...++|..++
T Consensus 300 -------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 300 -------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ------VRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred -------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHH
Confidence 34556677888889999888888888889999877 59999999999999999999
Q ss_pred hhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 197 TLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 197 ~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|.+.+++.++.||+..|.+.+...+++.+..+.
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999888776666655443
No 142
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.22 E-value=1.7e-10 Score=122.53 Aligned_cols=170 Identities=10% Similarity=-0.069 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI 110 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~ 110 (584)
+.+....++.....+.+..+.|.|+.+ .|.+..+.+.+...+.++..++.++.|+++||+ |||+.+.++.+...++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 334444455556677777888888865 699999999999999999999999999999998 999998887666666655
Q ss_pred HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh
Q 007932 111 LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF 190 (584)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (584)
++... .+.+.+.+..++.|++.+...+...++..|.+|++ .|++..++.+....
T Consensus 301 ~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~ 354 (406)
T PRK11551 301 ALAAA--------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ------VRGTGVGAAVAVGR 354 (406)
T ss_pred HHHhc--------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh------hhhhhhhHHHHhhh
Confidence 44443 23444556667778877777888889999999988 59999999999999
Q ss_pred HhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHH
Q 007932 191 IGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~ 228 (584)
+|..++|.+.|++.+..+ |...++......+++.+..+
T Consensus 355 ~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987644 55555555544444444433
No 143
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.22 E-value=5.2e-10 Score=122.55 Aligned_cols=203 Identities=17% Similarity=0.190 Sum_probs=154.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
..|.+.++.....+.+....++.....+-+.+.++++..+.|++.+.+-++..+...+..+.+-|. -|-|.+-+|++++
T Consensus 94 ~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 94 NIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLM 172 (735)
T ss_pred CcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHH
Confidence 335566666666666666668888888889999999999999999999999999999999999998 8888999999999
Q ss_pred HHHHHHHHHhhhccc-------------cCC--------------CCCCC--CcC--CCCcchHH-HHHHHHHHHHHhcc
Q 007932 106 VLGMILLTMAASLKF-------------MKP--------------TCTNG--ICS--KTSTSQIA-FFYSSLYIIAIGAG 153 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~-------------~~~--------------~~~~~--~~~--~~~~~~~~-~~~~~~~~~gi~~g 153 (584)
+++.++.++-..+.. ..+ .|... .|. ..+...++ +++++.++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 999998876531110 000 01100 111 12222233 78899999999999
Q ss_pred cccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc------------------cc-hhHHHH
Q 007932 154 GTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN------------------LG-WGLGYG 214 (584)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------------------~~-~~~~f~ 214 (584)
..++...+++=|....+ .....+++.+.+..+|.++|.++++++... .| |+..|+
T Consensus 253 pi~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred CCccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 99999999999988877 478899999999999999999999887431 12 778888
Q ss_pred HHHHHHHHHHHHHHHhCCcee
Q 007932 215 IPTAGLLFSLVIFYIGSPIYR 235 (584)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (584)
+.+.+.++..+.++.+++.++
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCc
Confidence 888887777777777665543
No 144
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.20 E-value=2.8e-10 Score=120.87 Aligned_cols=177 Identities=12% Similarity=-0.037 Sum_probs=130.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHH-HHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFT-LSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~-~~~~~~~ 106 (584)
|.++...+..++....+++...+.|.|++ ++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44566667777778888899999999985 5899999999998999999999999999999998 9988764 3333333
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+.+...... ...+.+...+..++.|++.+...+. .+.+.|..| + +|+++.++.+
T Consensus 300 ~~~~~l~~~~~~---------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~------~~g~~~g~~~ 356 (402)
T TIGR00897 300 IFTLALYYIPQH---------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-K------HKGAAMSVLN 356 (402)
T ss_pred HHHHHHHHHHHc---------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-c------hhHHHHHHHH
Confidence 333333222100 0123455666777778777765443 455666544 3 4899999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
...++|..++|.+.+.+.+.+||...|++.++..+++.+..++
T Consensus 357 ~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 357 LSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888776666555443
No 145
>PRK15075 citrate-proton symporter; Provisional
Probab=99.20 E-value=1.8e-10 Score=123.70 Aligned_cols=153 Identities=12% Similarity=0.035 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHH-HH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMI-LL 112 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~-~~ 112 (584)
+...++....++.+..+.|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||++++++.++..+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 4444556677888889999999988999999988888888899999999999999999 999998876544332221 11
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHh-H
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSF-I 191 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~ 191 (584)
..... .++.....+..++.+++.+...+....+..|.+|++ .|++++++.+...+ +
T Consensus 323 ~~~~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~~ 379 (434)
T PRK15075 323 SWLVA-----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATAI 379 (434)
T ss_pred HHHHc-----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHHH
Confidence 11110 022223334444556666666666778889999988 59999998654444 4
Q ss_pred hHHHHhhhhhhhhcccchh
Q 007932 192 GALCATLGLVYIQENLGWG 210 (584)
Q Consensus 192 g~~~g~~~~~~l~~~~~~~ 210 (584)
++.++|.+.+++.+..|++
T Consensus 380 ~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 380 FGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HhhhHHHHHHHHHHhcCCc
Confidence 5778999999999988854
No 146
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=3.7e-09 Score=108.66 Aligned_cols=132 Identities=14% Similarity=0.035 Sum_probs=103.8
Q ss_pred HHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcC
Q 007932 52 VNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICS 131 (584)
Q Consensus 52 ~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (584)
..|..+.+| +...+-|..-+|.+.+....+.+-|+.||+ |=|...+++..+-.+|..+=..+. .|+++
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~--------- 135 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVP--------- 135 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccc---------
Confidence 346666667 666667888899999999999999999999 999999999999999987776653 34433
Q ss_pred CCCcchHH--HHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 132 KTSTSQIA--FFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 132 ~~~~~~~~--~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
+.++ ..+.+-.+.+.+.-......+-+.+-+|++. +|+.+...-.++..+|.++|.++...+..
T Consensus 136 ----~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~------qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 136 ----PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD------QRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred ----ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc------hhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 2233 6667777777777777777677778899988 59999999888888999888777766654
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.19 E-value=1.2e-10 Score=123.00 Aligned_cols=160 Identities=16% Similarity=0.100 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
...+.....+.....+....+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.+...+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence 33344444555566667778889999999999999999999999999999999999999998 99999988876553332
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
....... .+.+.+.++.++.++..+...+..+.++.|.+|++ .|++++++.+...
T Consensus 319 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~ 373 (405)
T TIGR00891 319 IPVFAIG-------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD------QRAAGLGFTYQLG 373 (405)
T ss_pred HHHHHhC-------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc------hhHHHhhHHHHHH
Confidence 2222111 33455666666777777777788889999999988 5999999999999
Q ss_pred hHhHHHHhhhhhhhhcccc-hhHHHHH
Q 007932 190 FIGALCATLGLVYIQENLG-WGLGYGI 215 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~-~~~~f~~ 215 (584)
++|..++|.+.|++.++.| |+..+..
T Consensus 374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 374 NLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999888 7765553
No 148
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.19 E-value=3.5e-10 Score=122.94 Aligned_cols=174 Identities=8% Similarity=-0.034 Sum_probs=114.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhH-----HHH--HH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFW-----TFT--LS 101 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-----~~~--~~ 101 (584)
..|.+.+..+......+.+..++|.|+.+++|++..+++.....+.++..++.+++|+++||+ |||+ ..+ +.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555555555555667778889999888999999999999999999999999999999998 8762 222 22
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.++..++.++.... .+.+...+..++.+++.+...+...++..+..| + .++..
T Consensus 332 ~~l~~i~~~~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~------~~g~~ 384 (476)
T PLN00028 332 QTLGGVFCIWLGRA--------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-R------SLGVI 384 (476)
T ss_pred HHHHHHHHHHhccc--------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-h------hchhh
Confidence 22222222222211 223334444455555554444555555666554 3 38899
Q ss_pred eeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhC
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
.++.+...++|+.+++.+.+ .....+|+..|++.+++.+++.++.++.+
T Consensus 385 ~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 385 SGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 99887777777777766543 22334699999988877777766665543
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.18 E-value=9.7e-11 Score=126.53 Aligned_cols=172 Identities=10% Similarity=-0.022 Sum_probs=136.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc-cchhHHHHHHH--HH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY-IGRFWTFTLSS--LI 104 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~Grk~~~~~~~--~~ 104 (584)
+.++..+...++..++++....+++.|+++ +|.+..+.+.+.+...++..++.+++|+++||. .++|+..+++. ++
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 456666777777888888888899999864 799999999999999999999999999999983 14454444433 33
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
..++.+++... .+.+.+++.+++.|++.+...++..+++.|.+|++ ++++.+++
T Consensus 320 ~~l~~ll~~~~--------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~g~ 373 (455)
T TIGR00892 320 NGLTHLLCALA--------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAVGL 373 (455)
T ss_pred HHHHHHHHHHh--------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHHhH
Confidence 33333333333 34666788899999999999999999999999987 58999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhccc-chhHHHHHHHHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQENL-GWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~ 226 (584)
++...++|..+||.++|++.+.. +|+..|++.++..+++.+.
T Consensus 374 ~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 374 VTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 99999999999999999998877 4999999888766555443
No 150
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=1.9e-10 Score=117.45 Aligned_cols=185 Identities=15% Similarity=0.039 Sum_probs=149.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
.+..|.+.+..+...-++.++..+++.|+.++++.++.+++.....+.+...+..+.+|+|+||+ |.+|+.++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 47789999999999999999999999999999999999999999999999999999999999999 99999999888888
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++..+.....+ . +. ...+...+++..+.+++..|.-+.....++...+|.+ -+.+.++..
T Consensus 296 ~~~~~l~~~~~--~----------~~-~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vg 355 (417)
T COG2223 296 LAAALLSLFLT--G----------FG-HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVG 355 (417)
T ss_pred HHHHHHHcccc--c----------cc-cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHH
Confidence 88877776531 0 00 0133444555455555555655666677788888765 688899999
Q ss_pred hHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 187 FSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
...++|+..-|...+...+..| +...|++.....+++.+..+..+.
T Consensus 356 a~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 356 AIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988999999888887 888999888887777776665544
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=4.2e-10 Score=116.05 Aligned_cols=179 Identities=14% Similarity=0.088 Sum_probs=149.9
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+.+.++......++...+.|+..+++.+++++.-|+|....+++...|.++..++..++|+++|| +.|+++....++.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 44667888888999999999999999999999999999999999999999999999999999999 6888888887777
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
++..+.+.+.. .+.+...+..++.|+..+......+.-.++..|+. +..+.+++
T Consensus 287 a~~~l~l~~~~-------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~-------~~~a~sl~ 340 (394)
T COG2814 287 ALALLALTFTG-------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPDA-------ADLAGSLN 340 (394)
T ss_pred HHHHHHHHHhc-------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCc-------hHHHHHHH
Confidence 77777766653 44556666666677777766666666667744444 79999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
....|+|..+|..++|.+.+++|+....+..++..+++++......+
T Consensus 341 ~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 341 VAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998888888777665443
No 152
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.16 E-value=3.8e-10 Score=118.97 Aligned_cols=158 Identities=13% Similarity=0.136 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 007932 41 RMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKF 120 (584)
Q Consensus 41 ~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (584)
...+.....++|.|+++ .|.++.+.+...+...++..++.++.|+++||+ |||+++..+.++..++..... .
T Consensus 213 ~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~----- 284 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-----
Confidence 33444455678888865 699999999999999999999999999999999 999999888777776654332 1
Q ss_pred cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhh
Q 007932 121 MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGL 200 (584)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 200 (584)
........++.|++.+...|...+.+.|..|++ +++...+.+....++|..+||.++
T Consensus 285 -----------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 285 -----------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred -----------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112344566777777777888889889988876 356667777788899999999999
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 201 VYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 201 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
|++.++.+|++.|.+.+...++..+..+.
T Consensus 342 G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 342 AMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999877766655444333
No 153
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.15 E-value=5.2e-10 Score=120.45 Aligned_cols=184 Identities=16% Similarity=0.120 Sum_probs=153.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchh--HHHHHHHH
Q 007932 26 KWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRF--WTFTLSSL 103 (584)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk--~~~~~~~~ 103 (584)
+.|.+...++..++.+-+...+......|.++++|++..+...+.....+...++++++|++.||+ |.| ++++++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 447778888888999999999999999999999999999999999999999999999999999998 999 88888877
Q ss_pred HHHHHHHHHHH--hhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 104 IYVLGMILLTM--AASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 104 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
++.+..+...+ ..+ . ..-.+.+.+++.-++.|+..|..++..-++.+++.|++ +.+.+
T Consensus 358 ~~~~i~~~g~~G~~~~--~------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g------~e~ef 417 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPS--F------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG------REAEF 417 (477)
T ss_pred HHHHHHHHHHHHhhhc--c------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc------hhhHH
Confidence 66443333222 110 0 00145677888888999999999999999999999998 58999
Q ss_pred eeeehhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHHHh
Q 007932 182 FNWWMFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
++++.......+.+||++.+.+.+..| -|..+....+..++++++++..
T Consensus 418 Fgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 418 FGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988776 7888887777777777666554
No 154
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.14 E-value=4.7e-10 Score=120.45 Aligned_cols=178 Identities=13% Similarity=0.028 Sum_probs=121.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccch--hHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGR--FWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--k~~~~~~~~~~ 105 (584)
+.++.+.+..++....++++.+++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+| ++......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 3456666666667777778888999999888999999999999999999999999999999997222 22222222221
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++...+.... . .+.....+..+..|++.............|.+|++ .|++..++.
T Consensus 323 ~~~~~~~~~~~---~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 378 (434)
T PRK11663 323 LLSVGSLWLMP---F---------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKE------AAGAATGFV 378 (434)
T ss_pred HHHHHHHHHcc---c---------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHh------hHHhHHHHH
Confidence 22211111111 0 11222233333344433222223345667888876 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
++..++|..++|.+.+++.+..||+..|++.+++.+++.+..+.
T Consensus 379 ~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 379 GLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776665554443
No 155
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.13 E-value=7.8e-10 Score=118.92 Aligned_cols=178 Identities=13% Similarity=0.106 Sum_probs=121.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+|......++.....+++..++|.|+++..|+++.++++....+.++..++.+++|+++||+ |+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 4466666677777777888999999999988999999999999999999999999999999998 765433334322222
Q ss_pred HHH--HHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 108 GMI--LLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 108 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
..+ ++.... + ..+.+...+..++.|.+.............|.+|++ .|+++.++.
T Consensus 330 ~~~~~~~~~~~--~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 386 (438)
T TIGR00712 330 VTIAVIVYWMN--P---------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGFT 386 (438)
T ss_pred HHHHHHHHHhc--C---------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh------heeeehhhh
Confidence 111 111110 0 012233333344445443322222234567888887 599999999
Q ss_pred hhHHhHhH-HHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGA-LCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 186 ~~~~~~g~-~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
+...++|+ .++|.+.|.+.++.||...|++.....+++.+....
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 98888875 689999999999889999988776655555444433
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.11 E-value=5.5e-10 Score=120.34 Aligned_cols=179 Identities=13% Similarity=0.035 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 34 VGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLT 113 (584)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~ 113 (584)
++..+......+.+..+.+ +..+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++.+++.+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHHHHHHhCCeehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3333333333334444444 44567899988888888889999999999999999998 999999999888887776666
Q ss_pred HhhhccccCCCCCCCCcCCCC-cchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 114 MAASLKFMKPTCTNGICSKTS-TSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
....... ...+ ..+...+....++.+.......+....++.|.+|++ .|+++.++.+...++|
T Consensus 368 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~~lg 431 (481)
T TIGR00879 368 ILGASFV----------TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS------LRPKGISIAVAANWLA 431 (481)
T ss_pred HHhhccc----------CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH------HHHHHHHHHHHHHHHH
Confidence 3211000 0000 002222222222222222233466777789999987 5999999999999999
Q ss_pred HHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 193 ALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 193 ~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
.+++|.+.+++.++.+|++.|++.++..+++.++.+..
T Consensus 432 ~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 432 NFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHhee
Confidence 99999999999988899999988877766665555443
No 157
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.11 E-value=9.5e-10 Score=118.02 Aligned_cols=176 Identities=10% Similarity=-0.053 Sum_probs=113.5
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 30 CAFLVGY-EAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 30 ~~~~~~~-~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
.+..... .......+|++.+++|.|+.+++|.+..+.+...+...++..++.++.|+++||+ |||++++++.++.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALF 322 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 3443333 3344778899999999999989999998988888888888888899999999998 9999887776544333
Q ss_pred HHHHHH-hhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 109 MILLTM-AASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 109 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
...... ... ..+.........+.....+...+..+.+.+|.+|++ .|+++.++.+.
T Consensus 323 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~------~r~t~~g~~~~ 379 (432)
T PRK10406 323 TVPILSALQN-----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ------VRALGVGLSYA 379 (432)
T ss_pred HHHHHHHHHc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------ccchhhhHHHH
Confidence 322221 110 011221111122222333333455677889999998 59999999887
Q ss_pred HHhH-hHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 188 SSFI-GALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 188 ~~~~-g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
..++ ++...|.+.+++.....|...+++.++..+++.+..+.
T Consensus 380 ~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 380 VANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 6654 34457777776644323555666555555555554444
No 158
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.10 E-value=1e-11 Score=135.46 Aligned_cols=198 Identities=16% Similarity=0.150 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007932 32 FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMIL 111 (584)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~ 111 (584)
+......+.++..+++......-++++++++..++|++.+.+-++..+..++..++++|. .|-|.+-+|.+++++|.++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence 333333334477788888888888999999999999999999999999999999999997 7888888999999999988
Q ss_pred HHHhhhccccCC-------CCCC----CCc-------------------CCCCcchHHHHHHHHHHHHHhcccccccccc
Q 007932 112 LTMAASLKFMKP-------TCTN----GIC-------------------SKTSTSQIAFFYSSLYIIAIGAGGTKPNIST 161 (584)
Q Consensus 112 ~~~~~~~~~~~~-------~~~~----~~~-------------------~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~ 161 (584)
+++-+-+..-++ .+.+ ..| +........+++++.++.|+|....++...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 886542221110 0000 012 1112234578999999999999999999999
Q ss_pred cccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc---------------------cc-hhHHHHHHHHH
Q 007932 162 FGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN---------------------LG-WGLGYGIPTAG 219 (584)
Q Consensus 162 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~~-~~~~f~~~~~~ 219 (584)
++=|..++++ -+...++.+.+..+|.++|.++++.+... .| |+..|.+.+++
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999884 78899999999999999998888876421 22 77778777777
Q ss_pred HHHHHHHHHHhCCceee
Q 007932 220 LLFSLVIFYIGSPIYRH 236 (584)
Q Consensus 220 ~~~~~~~~~~~~~~~~~ 236 (584)
.++..+-++.++++++.
T Consensus 239 ~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp -----------------
T ss_pred HHHHHHHHHcCCccCCC
Confidence 66666555555554443
No 159
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.10 E-value=1.5e-09 Score=118.27 Aligned_cols=179 Identities=9% Similarity=0.037 Sum_probs=127.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHH-HHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVN-NWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
.+......++.....+....+.++|+.+++|++..+.+.... ...++..++.+++|+++||+ ||||.+.++.++.+++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 343444445555666666777888988889999999999875 55678999999999999999 9999887766655554
Q ss_pred HHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhH
Q 007932 109 MILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFS 188 (584)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (584)
.+.+..... ..++...+.+..++..+..|...+...++..+..+++ .+++.+++.+..
T Consensus 303 ~l~~~~l~~----------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~------~~~t~~gl~~s~ 360 (491)
T PRK11010 303 NAGYWLLSI----------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS------FSATQFALLSAL 360 (491)
T ss_pred HHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------CcHHHHHHHHHH
Confidence 433322110 0123333444445544444444455677788888877 478888999999
Q ss_pred HhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhC
Q 007932 189 SFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 189 ~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
.++|..+++.+.|++.+.+||+..|.+.++..+.+.+.....+
T Consensus 361 ~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 361 SAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998989999999999999999988887777766665543
No 160
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.08 E-value=1.4e-09 Score=114.62 Aligned_cols=166 Identities=7% Similarity=-0.110 Sum_probs=129.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++......++....+....++.+.|++ +.|.+..+.+...+...++..+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 45566666666667777777788889985 5899999999998888888889999999999999 999999999888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh-
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM- 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 186 (584)
+.+++... ++.+.+++..++.|++.+...+....++.+. +++ ++++..+.+.
T Consensus 283 ~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~ 335 (382)
T PRK11128 283 RWGLMGST--------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS------EVIRLQALYSA 335 (382)
T ss_pred HHHHHHhh--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh------hhHHHHHHHHH
Confidence 77666654 4567788889999999998888888888776 433 3577777665
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~ 223 (584)
....+|..+||.++|++.+..|+. .|+..++..+++
T Consensus 336 ~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 336 LAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 455678899999999999988874 555555544443
No 161
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.06 E-value=2.1e-09 Score=110.01 Aligned_cols=162 Identities=12% Similarity=0.037 Sum_probs=124.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQ--LHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+..++.++..++....-.++..+.+.|+.+. +|+++.+.+...+.+..+..+++++++++.||+ |+||++.++.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 4455555555555555667788899999754 799999999999999999999999999999998 9999998888777
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++.++..... ... ...+.++.|++.+..+|...+...+.+|++. +++.++.
T Consensus 219 ~~~~~l~~~~~--------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~ 270 (310)
T TIGR01272 219 VLLSIGAALTH--------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL 270 (310)
T ss_pred HHHHHHHHHcC--------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH
Confidence 77665444331 111 2235557899999999999999999888753 3334443
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAG 219 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~ 219 (584)
.+..+|+.++|.+.|.+.+..|.+..|++..+.
T Consensus 271 -~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 271 -CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred -HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 566799999999999999988988888755543
No 162
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.06 E-value=2.6e-09 Score=113.60 Aligned_cols=173 Identities=12% Similarity=-0.068 Sum_probs=128.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.++.......+.....+......|.|+.+++|.++.+.++......++..++.++.|+++||+ |||+.+.++.++..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 293 (406)
T PRK15402 215 RRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVA 293 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3455555555555666666667778888888999999988887777788889999999999999 999999999888877
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..+........ ..+.+.+.++.++.|++.+...+..........| + ++++..+.+++
T Consensus 294 g~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~------~~g~~~~~~~~ 351 (406)
T PRK15402 294 GLLLAALATVIS---------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-V------SKGTVSAAMGM 351 (406)
T ss_pred HHHHHHHHHHcc---------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-c------cccHHHHHHHH
Confidence 777766542110 1234556777788888888877666555544333 4 48999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~ 223 (584)
...+|..+|+.+.+++.+..++....+..++..++.
T Consensus 352 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 352 LSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999988777665544444443333
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.05 E-value=2.4e-09 Score=113.43 Aligned_cols=172 Identities=12% Similarity=0.059 Sum_probs=128.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQL---HEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
|.++..+...++....+.....+.+.|+.+.+ +.+....+.+.+...+...++.++.|++.||+ |||+.+.++.++
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l 293 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTI 293 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 34455555555555555556566788887665 45566778888888888889999999999999 999999999888
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+++..+.... .+.+.++...++.|++..........+..+..+++ .+++..+.
T Consensus 294 ~~l~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~at~~~~ 347 (396)
T TIGR00882 294 MSVRIIGSSFA--------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR------LSATIYLI 347 (396)
T ss_pred HHHHHHHHHhc--------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------eEEEeehH
Confidence 88877665554 34666777888888887665555555666666665 36666655
Q ss_pred -ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 185 -WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 185 -~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
++....+|..+++.++|++.+..||+.+|.+.++..++..++
T Consensus 348 ~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 348 GFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999887765555443
No 164
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.05 E-value=1.5e-08 Score=108.51 Aligned_cols=161 Identities=14% Similarity=0.076 Sum_probs=114.3
Q ss_pred HHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc--cc--hhHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 007932 51 LVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY--IG--RFWTFTLSSLIYVLGMILLTMAASLKFMKPTCT 126 (584)
Q Consensus 51 ~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~--~G--rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (584)
...|+++++|+++++.....+...+-. ..-++.|.++|.+ .| ||+=++++.++.+++...++....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~--------- 81 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA--------- 81 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc---------
Confidence 345789999999999887666555444 4567779999995 34 444555566666555555554321
Q ss_pred CCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc
Q 007932 127 NGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN 206 (584)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 206 (584)
...+.....+..++..+|........-+++.|....+.. .++...++.+....+|..++..+.|.+.+.
T Consensus 82 -------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 82 -------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred -------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 112344555666777888888889999999998865532 367788888889999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 207 LGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 207 ~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
.+++..|.+.+....+..+......+
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred CCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999998887665555444444433
No 165
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.05 E-value=1.3e-08 Score=108.62 Aligned_cols=361 Identities=15% Similarity=0.096 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh-hhhhHHHHH----HHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 33 LVGYEAFERMAFYGIQSNLVNYLTSQLHEDTV-SSVRNVNNW----SGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~-~~~~~~~~~----~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+...+.....+........+.....+.+.. ..+...... .+...+.+++.|.++||+ |||..+.+.+....+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHH
Confidence 33334444444444445555565555544332 233334444 577788899999999999 999999999988888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHH--hcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAI--GAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi--~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
..+.+.+.. .| +++ +.++ +.+...+...++++|...++ .|....++.
T Consensus 105 ~~~~~~~~~---------------------~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~------~R~~~~gll 153 (463)
T KOG2816|consen 105 PALCLLFQG---------------------YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEE------ERSSSIGLL 153 (463)
T ss_pred hHHHHHHHH---------------------HH-Hhh---hcccccchhhhhhhhhhheeeccchh------HHHHHHHHH
Confidence 877777651 22 222 3332 33456678888999999888 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceeecCCCCCChhhhhHHHHHHHHhhccccCCC
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRHKIRKTKSPARDLIRVPIAAFRNRKIQLPD 265 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (584)
+.....+..++|..++.+.+..|.-..|.+..+..++..+......|+...++.+++.+
T Consensus 154 ~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~--------------------- 212 (463)
T KOG2816|consen 154 SGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDAT--------------------- 212 (463)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccc---------------------
Confidence 99999999999999999999999999999988887777666555444322211111000
Q ss_pred CCCCccccccccccccccccccCCCcchhhhHHHHhcCCCCCCCCCcccccchhhHHHHHHH-HHHHHhhhhhhhhcccc
Q 007932 266 NPSELHEFDTQDYIRSGKRQVVHSPAFRCLDKAAIKHGNGGDSKPPCTVTQVEGTKLVLGMA-LIWLVTLIPSTIWAQIN 344 (584)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 344 (584)
.. ........+....+ ..+... ....+|..+..+ ..++....-+.......
T Consensus 213 ----~~--------~~~~~~~~~~~~~~--------------~~~~~~--~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~ 264 (463)
T KOG2816|consen 213 ----LR--------ELTPGSLDSSHVAD--------------AFQSLT--KVGPDRLLLLLLLVAFLSSLPEAGGASDVL 264 (463)
T ss_pred ----cc--------ccCCCcccchhhhh--------------hhhhhc--ccCCCccchHHHHHHHHHHHHHhcCceeEE
Confidence 00 00000000000000 000000 011222222211 11111111111111011
Q ss_pred ceEEEecccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007932 345 TLFVKQGTTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYA 424 (584)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~ 424 (584)
.++.......+... +..-....+....+..++..+.. .+.. ...+.+..|+....+...+.++
T Consensus 265 ~~yl~~~f~w~~~~---~s~~~~~~~~~~~i~~l~~~~~l-------~~~l-------~~~~~i~lGl~~~~~~~~~~af 327 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKE---FSDLLSLVSILGIISQLLLLPLL-------SSIL-------GEKRLISLGLLSEFLQLLLFAF 327 (463)
T ss_pred EEEEeeecCcCHHH---HHHHHHHHHHHHHHHHHHHHHHH-------HHHH-------hhhhHhhHHHHHHHHHHHHHHH
Confidence 22222211111110 00000111122222333332222 1111 1123578899999999988888
Q ss_pred HHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHH
Q 007932 425 VEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFL 504 (584)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l 504 (584)
+. -.|++..............|...+++...+.++.+|++.++......+.+.+++.+
T Consensus 328 ~~----------------------~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 328 AT----------------------ETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred hc----------------------cchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHH
Confidence 72 22444455556666677889999999999999999999999999999999999999
Q ss_pred HHHhhhhhc
Q 007932 505 VTLVDKVTG 513 (584)
Q Consensus 505 ~~~i~~~~~ 513 (584)
...+.....
T Consensus 386 ~~~i~~~t~ 394 (463)
T KOG2816|consen 386 YGNIFALTL 394 (463)
T ss_pred HHHHHHHHH
Confidence 988876554
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.04 E-value=6.3e-10 Score=116.16 Aligned_cols=162 Identities=13% Similarity=0.146 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH--HH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL--IY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~--~~ 105 (584)
+.++.+.+..++.....+++..+.+.|+.+.+|.+..+.+...+...++..++.++.|+++||+.+||+..+.... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4566677777777777888889999999999999999999999999999999999999999986234433322211 11
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++....... + ..+.....+..++.|.......+....+..|.+|++ .|+++.++.
T Consensus 296 ~~~~~~~~~~---~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 351 (379)
T TIGR00881 296 IVSLLVYWLN---P---------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK------AAGTAAGFV 351 (379)
T ss_pred HHHHHHHhcC---c---------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc------hhHHHHHHH
Confidence 1111111111 0 123344555556667665555666677889999987 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGY 213 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f 213 (584)
+...++|..++|.+.|.+.+.+||+..|
T Consensus 352 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 352 GFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999998754
No 167
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.03 E-value=7.1e-09 Score=106.10 Aligned_cols=129 Identities=14% Similarity=0.003 Sum_probs=91.5
Q ss_pred HHHHHHHHhhhhcCC---ch----hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHH-HHHHHHHHHHHHHHHhhhc
Q 007932 47 IQSNLVNYLTSQLHE---DT----VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFT-LSSLIYVLGMILLTMAASL 118 (584)
Q Consensus 47 ~~~~~~~yl~~~l~~---~~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~-~~~~~~~~~~~~~~~~~~~ 118 (584)
...++|+|+++..+. ++ +-.+...++..+...+..|+-|.++|+. |+||-.+ ....+-.++...+.+..
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~-- 110 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP-- 110 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC--
Confidence 356678888876554 43 3456667778888888899999999999 8665544 44455555666666653
Q ss_pred cccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhh
Q 007932 119 KFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATL 198 (584)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 198 (584)
++.+++...+..++..++.......-.+++.+..++++ .++..+.-+....+|+.+.-+
T Consensus 111 ---------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~li 169 (438)
T COG2270 111 ---------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVILLI 169 (438)
T ss_pred ---------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHHHH
Confidence 11345566666667789999988999999999998873 677777766777777776644
Q ss_pred h
Q 007932 199 G 199 (584)
Q Consensus 199 ~ 199 (584)
.
T Consensus 170 ~ 170 (438)
T COG2270 170 F 170 (438)
T ss_pred H
Confidence 3
No 168
>PRK10504 putative transporter; Provisional
Probab=99.03 E-value=2.8e-09 Score=115.61 Aligned_cols=158 Identities=9% Similarity=-0.053 Sum_probs=124.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.....+...++.+.++.......|.|++..+|.++.+.++......++..++.++.|++.||+ |||+++.++.++.++
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4455566666677777666666778888888999999999998888888888889999999999 999999999887777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++..... ..+.+.+.+..++.|++.+...+..+.+..+.+|++ .++.+++++++
T Consensus 340 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~ 396 (471)
T PRK10504 340 VSLLFMLVAL-----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN------LASSGNSLLSM 396 (471)
T ss_pred HHHHHHhccc-----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH------hccchHHHHHH
Confidence 7666554320 122333445566778888888888889999999987 48999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccch
Q 007932 188 SSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
...+|..+|+.+++.+.+..++
T Consensus 397 ~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 397 IMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999988765554
No 169
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.02 E-value=4.2e-09 Score=111.07 Aligned_cols=172 Identities=9% Similarity=-0.020 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
.+......++...+.+....+.++|+.+..|.++.+.+...+...++..++.++.|++.||+ |+|+.+.++..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 44444444455555566667778888888999999999999999999999999999999998 99999998888777776
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
++..... .+.+...+..++.+++.+...+.......+..++++ .++... .+...
T Consensus 280 ~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~ 333 (382)
T PRK10091 280 LMLFFFG-------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE-----LLGAAG--GQIAF 333 (382)
T ss_pred HHHHHHH-------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch-----HHHHHH--HHHHH
Confidence 5554322 223344445555556554444433333333333221 244432 35677
Q ss_pred hHhHHHHhhhhhhhhcc-cchhHHHHHHHHHHHHHHHHHH
Q 007932 190 FIGALCATLGLVYIQEN-LGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~-~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
++|..+||.++|++.+. .+|+..+.+.++..++......
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 89999999999999885 6899998887766555544433
No 170
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.02 E-value=1.5e-09 Score=112.82 Aligned_cols=155 Identities=12% Similarity=0.067 Sum_probs=129.1
Q ss_pred chhHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQ-SNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~-~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
+.++..+...+......++.. .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+.++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445666666666666666666 6777787777999999999999999999999999999999998 99999988877777
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++..+..... .+.+.+.+..++.|++.+...+...+++.|.+|++ .|++..++++
T Consensus 289 ~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~ 343 (365)
T TIGR00900 289 LAILVVGLTP-------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAE------LLGRVFGAQF 343 (365)
T ss_pred HHHHHHHhhc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHH
Confidence 7766665541 13566778888999999999999999999999987 5999999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccc
Q 007932 187 FSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
...++|..++|.++|++.+.+|
T Consensus 344 ~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 344 SLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999987653
No 171
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.01 E-value=3.1e-09 Score=102.27 Aligned_cols=171 Identities=13% Similarity=0.064 Sum_probs=135.9
Q ss_pred CCCccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhH
Q 007932 17 RPVLSSKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFW 96 (584)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~ 96 (584)
.|.....+.....+|++..+..+...+.+-.++.-+.++++++|+|+.+++.+.+.....+.+.+++.|.++||+ ||+-
T Consensus 253 ~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~ 331 (459)
T KOG4686|consen 253 EPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNL 331 (459)
T ss_pred CcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-ccee
Confidence 355555667778899998888888888888888888999999999999999999999999999999999999999 9987
Q ss_pred HHHHHH-HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhh
Q 007932 97 TFTLSS-LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYER 175 (584)
Q Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~ 175 (584)
..+.+. +....+..++.++. +--+++..++|+..+......+..++-..|++
T Consensus 332 ~wv~~a~~~tl~~H~~l~Ft~----------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~----- 384 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFFTF----------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE----- 384 (459)
T ss_pred hhHHHHHHHHHHHhhhHHhhh----------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH-----
Confidence 666553 45555555555542 22355667778887776666777788888877
Q ss_pred cccceeeeeehhHHhHhHHHHhhhhhhhhcccc---hhHHHHHH
Q 007932 176 NLKVSFFNWWMFSSFIGALCATLGLVYIQENLG---WGLGYGIP 216 (584)
Q Consensus 176 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~---~~~~f~~~ 216 (584)
+.|++++..+...|+|-.+.|++.|.+.+.-| |--.|.+.
T Consensus 385 -qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~ 427 (459)
T KOG4686|consen 385 -QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLI 427 (459)
T ss_pred -HhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHH
Confidence 69999999999999999999999999988654 43344443
No 172
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.01 E-value=4.9e-09 Score=112.05 Aligned_cols=148 Identities=15% Similarity=0.044 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 007932 41 RMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKF 120 (584)
Q Consensus 41 ~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (584)
....+.+..++|.|+++ .|.++.+.+.......++..++.++.|+++||+ |||+.+..+.++..++.++.....+
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 318 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ--- 318 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc---
Confidence 33444566788888875 599999999888889999999999999999998 9999999888776665544433210
Q ss_pred cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhh
Q 007932 121 MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGL 200 (584)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 200 (584)
.....+.+..+..+.+..+..+..+.++.|.+|++ .|++++++.+...++|+.++|.+.
T Consensus 319 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 319 ---------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE------VRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred ---------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH------HHhhhhhHHHHHHhHHHHHHHHHH
Confidence 11221222222222333333456677889999987 599999999999999999999999
Q ss_pred hhhhcccchhHHHH
Q 007932 201 VYIQENLGWGLGYG 214 (584)
Q Consensus 201 ~~l~~~~~~~~~f~ 214 (584)
+++.+..|+....+
T Consensus 378 g~l~~~~g~~~~~~ 391 (426)
T PRK12307 378 TWLGITMGLGAALT 391 (426)
T ss_pred HHHHHcccHHHHHH
Confidence 99999888654433
No 173
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.00 E-value=1e-09 Score=117.65 Aligned_cols=161 Identities=19% Similarity=0.112 Sum_probs=123.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++.+++..++.+.+.+......+.|.+..++ +..+.++......++..++.++.|+++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 556667777777777777666655556665666 556677777788899999999999999999 999999999888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhh-hcccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYE-RNLKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~ 186 (584)
+.+++.+.. .+.+.+.+..++.|++.+...+...++++|..|.++.+. +.+++.++++++
T Consensus 300 ~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 360 (437)
T TIGR00792 300 GYLIFFFAG-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRT 360 (437)
T ss_pred HHHHHHHcc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHH
Confidence 776665531 234556667778889999888999999999887432111 114688999999
Q ss_pred hHHhHhHHHHhhhhhhhhcccch
Q 007932 187 FSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
+...+|..+++.+.+++.+..||
T Consensus 361 ~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 361 FVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999876665
No 174
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.00 E-value=3.2e-09 Score=113.24 Aligned_cols=165 Identities=10% Similarity=-0.050 Sum_probs=116.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHH-HHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTS-QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWT-FTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~-~~~~~~~~ 105 (584)
+.+|......++....++++.+++|.|+++ ..+.+..+++.......++..++.+++|+++||+ |||+. ..+..++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 345667777788888899999999999976 3577888889999999999999999999999998 97775 33443343
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++..+ .... .+......+..+.++|.....+.......|.+|++ +|+.+.++.
T Consensus 321 ~~~~~~-~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~~ 374 (412)
T TIGR02332 321 AAGWLL-ASAT-------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAVI 374 (412)
T ss_pred HHHHHH-HHhc-------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHHH
Confidence 333222 2111 11111222222233333333344445556778877 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAG 219 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~ 219 (584)
+...++|+.++|.+.+.+.+..| |++.|++.++.
T Consensus 375 ~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 375 NATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999999999999999998775 99888766553
No 175
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.99 E-value=5.9e-09 Score=110.23 Aligned_cols=175 Identities=17% Similarity=-0.002 Sum_probs=124.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHH-HHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSG-VVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
..+......++...+.....++.+.|+.+ .|+++.+.+++...... ...++.+++|++.||+ |+||.+.++.++.++
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 34555555566666667777788888875 79999999998887764 5667789999999999 999999887766533
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
............ ...+.........+.+++.|...+...+...+..++++ .+++.++..+.
T Consensus 287 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~ 347 (390)
T TIGR02718 287 LALLWFAQAAFW--------------LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHHcc--------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHHH
Confidence 332222211100 00223333444445566677777777777777776632 58999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~ 224 (584)
..++|..+||.++|++.+..||+..|.+.++..+++.
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999989887776555543
No 176
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.98 E-value=6.7e-09 Score=106.24 Aligned_cols=84 Identities=12% Similarity=-0.035 Sum_probs=70.5
Q ss_pred chHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcc---------
Q 007932 136 SQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQEN--------- 206 (584)
Q Consensus 136 ~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------- 206 (584)
.+...++++.++.|.|.+...+..+.++++..+++ ++++.+++.+....+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIE------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 45778999999999999999999999999999887 488999999999999999999999987632
Q ss_pred -------cchhHHHHHHHHHHHHHHH
Q 007932 207 -------LGWGLGYGIPTAGLLFSLV 225 (584)
Q Consensus 207 -------~~~~~~f~~~~~~~~~~~~ 225 (584)
..|+++|++.+....+..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688998866655444333
No 177
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.97 E-value=3.2e-09 Score=116.01 Aligned_cols=154 Identities=8% Similarity=-0.104 Sum_probs=129.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.........++..+..++...+.|.|+++.+|.|+.+++.......++..++.++.|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4556666777778888888888999999999999999999999999999999999999999999 999999988888887
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.+++..... ..+.+......++.|+|.|...+.....+.+..|++ +++.+.+.+++
T Consensus 338 ~~~~l~~~~~-----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~g~~~~~~~~ 394 (495)
T PRK14995 338 SFYGLAMTDF-----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE------KAAAAGAIETM 394 (495)
T ss_pred HHHHHHHhcC-----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH------hcchHHHHHHH
Confidence 7766654320 123444566778889999998888888888988887 58999999999
Q ss_pred HHhHhHHHHhhhhhhhhc
Q 007932 188 SSFIGALCATLGLVYIQE 205 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~ 205 (584)
..++|..+|+.+.+.+.+
T Consensus 395 ~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 395 AYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998888754
No 178
>PRK10133 L-fucose transporter; Provisional
Probab=98.96 E-value=1.1e-08 Score=109.99 Aligned_cols=165 Identities=12% Similarity=0.062 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 31 AFLVGYEAFERMAFYGIQSNLVNYL-TSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
+...+..++.....++...+.+.|+ ++.+|+++.+.++....+.++..++++++|++.||+ ||||++..+.++..++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 3444445555566666677888885 567899999999999999999999999999999998 99999988877766655
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
.+..+. .+. .......+.|++.+...|...+...|.+|++ .+.+.++..+ .
T Consensus 340 ~~~~~~--------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~~-~ 390 (438)
T PRK10133 340 LISAFA--------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIVM-T 390 (438)
T ss_pred HHHHHc--------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHhH-H
Confidence 444432 111 1244566789999999999999999998765 3555555543 4
Q ss_pred hHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHH
Q 007932 190 FIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLV 225 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~ 225 (584)
.+|+.++|.+.|.+.+..| -+..|+++.+..+....
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 4688888899999988887 67888776665444433
No 179
>PRK10054 putative transporter; Provisional
Probab=98.94 E-value=7.9e-09 Score=109.55 Aligned_cols=174 Identities=12% Similarity=0.039 Sum_probs=128.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTS--QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
|.++......++..+.......+.+.|+.. +.+.+....+.+...+........++.|++.||. +||+.+.+++++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 445555555666666555555666677643 3455666677777777777777788889999998 9999999998888
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.++...+.... .+.+.+.++.++.++|.+...|...+.+.+..|++ .++++++.+
T Consensus 285 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~~~~~~~~ 339 (395)
T PRK10054 285 VIGLVGFIFSG-------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MKASYFSAQ 339 (395)
T ss_pred HHHHHHHHHcc-------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cceehHhHH
Confidence 88876665531 23555667778889998888888888999999877 588888765
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+ ...+|..+||.++|++.++.|....|++.+....++.++..
T Consensus 340 ~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 340 S-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred H-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 4 56689999999999999999988888776655444444433
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.94 E-value=3.2e-09 Score=115.41 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=129.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+..+...++..+.+++...++|.|+++.+|.++.++++......++..++.++.|++.||+ |||+.+.++.++.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4556667777788888888889999999999999999999999999999999999999999998 999999999888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++....+ .+.+.+.+....++.|++.+...+.......+..|++ +++++.++++.
T Consensus 334 ~~~~~~~~~~----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~ 391 (485)
T TIGR00711 334 GFYWRAFTFT----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPH------KIARGSSLSNF 391 (485)
T ss_pred HHHHHhccCC----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHhHHHHHHHH
Confidence 7776653211 0123445666677889999888777777777888877 59999999999
Q ss_pred HHhHhHHHHhhhhhhhhcc
Q 007932 188 SSFIGALCATLGLVYIQEN 206 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~ 206 (584)
..++|+.+|+.+.+.+.++
T Consensus 392 ~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 392 TRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888664
No 181
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.94 E-value=1.8e-08 Score=105.84 Aligned_cols=164 Identities=10% Similarity=0.061 Sum_probs=118.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+...+...+.....+....+.|.|+++++|.++.+.+.+.....++..++.++.|++.||+ |||+.+.++.++..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~ 284 (385)
T TIGR00710 206 KMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAV 284 (385)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3445555555566666777777888888889999999999999999999999999999999999 999999988887777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.+++....... ......+.+..++.|++.+...+.......|.+|+ +++++.++.+.
T Consensus 285 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~ 342 (385)
T TIGR00710 285 SAVLLEITAILG---------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-------VAGTASALFGT 342 (385)
T ss_pred HHHHHHHHHHhc---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cchHHHHHHHH
Confidence 766665542100 02234455566678888888888888888888763 37888888777
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYG 214 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~ 214 (584)
....++.+++.+.+.+.+..+|...+.
T Consensus 343 ~~~~~g~i~~~~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 343 LRLVLGAIVGYLVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHhccccChHHHHHH
Confidence 765544444444555555444444433
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.93 E-value=1.4e-08 Score=110.71 Aligned_cols=172 Identities=14% Similarity=0.127 Sum_probs=143.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
+..++...++.++....+...+|.+..+.+|.++...|++.+.+.+|..++.++.+++.+|+ ++++.+..+.++++++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33344444444555555566788888899999999999999999999999999999999998 99999999988888888
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSS 189 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (584)
+.++++ ++.+...+..++.|++........++.+.+..|++ .|||.++++++..
T Consensus 299 ~~lal~--------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~~~ 352 (524)
T PF05977_consen 299 LLLALS--------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQMVF 352 (524)
T ss_pred HHHhcc--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHHHH
Confidence 777776 45777788888899998888888899999999988 5999999999999
Q ss_pred hHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 190 FIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 190 ~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
..+..+|..+.|.+.+.+|-+..+.+.++..++..++..
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888877776555555443
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=8.2e-09 Score=107.59 Aligned_cols=153 Identities=12% Similarity=0.060 Sum_probs=117.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc-hhHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG-RFWTFTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-rk~~~~~~~~~~~ 106 (584)
+..+.......+....++++..++|.|+++ .|.+..+.+...+...++..+++++.|+++||+ + ||+.+.++.++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV-KDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-ccchHHHHHHHHHHH
Confidence 445555556666777788888999999875 699999999999999999999999999999998 6 4556677777777
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+.+.... +.... ...++.|++.|...|...+.+.+..++++ +++...++.+
T Consensus 275 ~~~~~~~~~~--------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~ 328 (355)
T TIGR00896 275 VGLCGLLFAP--------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQ 328 (355)
T ss_pred HHHHHHHHhh--------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHH
Confidence 7766665542 11111 13457799999988887777776666543 4788888888
Q ss_pred hHHhHhHHHHhhhhhhhhcccc
Q 007932 187 FSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
...++|..++|.+.|++.++.|
T Consensus 329 ~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 329 SIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8888999999999999988765
No 184
>TIGR00895 2A0115 benzoate transport.
Probab=98.92 E-value=3.8e-09 Score=111.11 Aligned_cols=148 Identities=14% Similarity=0.055 Sum_probs=115.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+.+....++....++....+.| ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+.+....+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3444555556667777777777777 66678899999999999999999999999999999999 998555444433333
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+. ++.... .+.+.+.+..++.|++.+...+...+++.|.+|++ .|+++.++.+.
T Consensus 328 ~~-~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~ 381 (398)
T TIGR00895 328 AV-LVGSTL-------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTA------IRATGVGWAIG 381 (398)
T ss_pred HH-HHHHHh-------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH------HHHHHHHHHHH
Confidence 32 222211 23555677778889999999999999999999987 59999999999
Q ss_pred HHhHhHHHHhhhhhhh
Q 007932 188 SSFIGALCATLGLVYI 203 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l 203 (584)
...+|..+||.++|++
T Consensus 382 ~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 382 IGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhHHhc
Confidence 9999999999999875
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.92 E-value=1.5e-08 Score=109.72 Aligned_cols=177 Identities=11% Similarity=-0.015 Sum_probs=122.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHH--------
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTF-------- 98 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~-------- 98 (584)
++.+|...+..++....++...+++|.|+.+.+|++..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 35678888889999999999999999999999999999999999999999999999999999997 654321
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccc
Q 007932 99 TLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLK 178 (584)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r 178 (584)
..+......+..++..... ..+.....+...+.+.+.+...+.......|..|. .+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~ 394 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYL-----------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-------FL 394 (465)
T ss_pred HHHHHHHHHHHHHHHHHHc-----------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-------HH
Confidence 1111111111111111100 01223333444444555555555555555566654 38
Q ss_pred ceeeeeehhHHhHhHHHHhhhhhhhhccc---chhHHHHHHHHHHHHHHHHHH
Q 007932 179 VSFFNWWMFSSFIGALCATLGLVYIQENL---GWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 179 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+.+.++.+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.++..
T Consensus 395 g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 395 GFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999999987643 488888887776666654433
No 186
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.91 E-value=2.6e-08 Score=105.58 Aligned_cols=168 Identities=8% Similarity=-0.041 Sum_probs=121.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.++......+......++..++.++++.+++|+++.+.+.....+.++..++.++.|++.||. +|+..+....+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~ 294 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 3455554445555566666666764444567899999999999999999999999999999996 554444433333333
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+.++.... .+.+.+.+..++.|++.+...+..++.+.+..|++ +++..+.+..
T Consensus 295 ~~~l~~~~--------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 347 (394)
T PRK10213 295 ALVLTLWG--------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQVA 347 (394)
T ss_pred HHHHHHHh--------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHHH
Confidence 33333332 33556777788889999999998898888888744 4566667777
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFS 223 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~ 223 (584)
..++|..+|+.++|++.+..|++..+...++..++.
T Consensus 348 ~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 348 VIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 889999999999999999899888888776554333
No 187
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.90 E-value=1.9e-08 Score=102.96 Aligned_cols=172 Identities=12% Similarity=0.107 Sum_probs=143.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+....+..++.+=+..++.+....|...++|++..+..++.....++..++++++|+|.||+ |.|+++.++++++.+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 5677778888888888899999999999999999999999999999999999999999999998 999999999988777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
..+..... .....+.+.-.+.|...|..++..-++.++.+|++ +-+++++++..
T Consensus 331 ~~~~~~~~--------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~------k~~~fFglyal 384 (438)
T COG2270 331 AALYLIFL--------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKG------KEGRFFGLYAL 384 (438)
T ss_pred HHHHHHHc--------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc------cccceeehhhh
Confidence 76555543 12334666667889999999999999999999998 57999999999
Q ss_pred HHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~ 226 (584)
.......+||...+.+.+..| -|..+....+...++++.
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 999999999999999887655 455555544444444444
No 188
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.88 E-value=2.2e-08 Score=108.74 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007932 46 GIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTC 125 (584)
Q Consensus 46 ~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (584)
.+..+.|.+ .++.|.+.....+......+...++.+++|+++||+ |||+.++.+.++.+++.+++.......
T Consensus 289 ~~~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~------ 360 (479)
T PRK10077 289 VVLYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ------ 360 (479)
T ss_pred HHHHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC------
Confidence 333344443 456888877777777778888899999999999999 999999999998888887776542100
Q ss_pred CCCCcCCCCcchHHHHHHHHHHHHHhccc-ccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhh--
Q 007932 126 TNGICSKTSTSQIAFFYSSLYIIAIGAGG-TKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVY-- 202 (584)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gi~~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-- 202 (584)
.... ....+.++.+.+.+. ..|...+++.|.+|++ .|++++++.+...++|..+++.+.+.
T Consensus 361 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 361 ---------APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA------IRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred ---------cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChh------HHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 0111 222333444444433 3477789999999987 59999999999999999888655543
Q ss_pred ----hhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 203 ----IQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 203 ----l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+.+..+|++.|++.++..+++.+..+..
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 425 KNSWLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hccchhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 4456788888888776655555554443
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.86 E-value=3.9e-08 Score=104.90 Aligned_cols=187 Identities=11% Similarity=0.019 Sum_probs=126.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..|.+.+..++..-++.+...++|.|+++.+. ............+...+.++++|+|+||+ |+||+++++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 457888887777777777777789999877653 33333334456788889999999999999 999999999887777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCC-C--------------h
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDF-N--------------P 172 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~-~--------------~ 172 (584)
+..+..... |. ....+.+.+.+..+...++.|.-......++.+.||++ . .
T Consensus 329 ~~~~~~l~l--p~------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 329 FSALLFLTL--PG------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHHHh--cc------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 664433331 11 01134566666655555666666666677777777641 0 0
Q ss_pred hhhcccceeeeeehhHHhHhHHHHhhhhhhhhccc-chhHHHHHHHHHHHHHHHHHHHhC
Q 007932 173 YERNLKVSFFNWWMFSSFIGALCATLGLVYIQENL-GWGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 173 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
..+++-+.+.|+......+|+.+.|.+.+...+.. ++...|+...+..+++.++.++.+
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 11113566777878888888888887777766554 477888887777777766666654
No 190
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.86 E-value=2.9e-08 Score=119.66 Aligned_cols=165 Identities=13% Similarity=-0.011 Sum_probs=131.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh-hhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTV-SSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 106 (584)
+.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 4455555555566666667778889999999999998 999999999999999999999999998 99999988888777
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++.+++.+. .+.+.+++..++.|++.+...+...+++.+.+|++ .|++++++.+
T Consensus 311 ~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~rg~~~~~~~ 364 (1146)
T PRK08633 311 LSLFLLPTA--------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK------ELGKVLAANN 364 (1146)
T ss_pred HHHHHHHHh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc------chhhhhHHHH
Confidence 777666654 34566777788889999988888999999999988 5999999999
Q ss_pred hHHhHhHHHHhhhhhhhhc-ccchhHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQE-NLGWGLGYGIPTAG 219 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~-~~~~~~~f~~~~~~ 219 (584)
+..++|.++++.+++.+.. .+++...|++.+..
T Consensus 365 ~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 365 FLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999888877776644 23455555544443
No 191
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=3.6e-08 Score=105.67 Aligned_cols=162 Identities=17% Similarity=0.095 Sum_probs=134.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|..+.++...++.+.+.....+..+.|.+..+|.+ ...+.......+...++.++.++++||+ |+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 66777788888888888877778888888888877 5567777788999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhh-hcccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYE-RNLKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~ 186 (584)
+.++..+... .+.+.+++..++.|++.+...+...++++|..+.++.+. +.+.+..++.+.
T Consensus 303 ~~~~~~~~~~------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~ 364 (428)
T PF13347_consen 303 GFLLLFFLGP------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNS 364 (428)
T ss_pred HHHHHHHHHh------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhh
Confidence 9888877631 467888899999999999999999999999998654221 124588889999
Q ss_pred hHHhHhHHHHhhhhhhhhcccch
Q 007932 187 FSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
+...+|..+++.+.+.+.+..|+
T Consensus 365 ~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 365 FFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999988888654443
No 192
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.85 E-value=1.6e-08 Score=110.65 Aligned_cols=168 Identities=14% Similarity=0.135 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhh------------HHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHH
Q 007932 35 GYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVR------------NVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSS 102 (584)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 102 (584)
...+...+.+|++..+.|.+++ +.|++..+.+. ......++..++.++.++++||+ |||++++++.
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~ 372 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGF 372 (502)
T ss_pred HHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHH
Confidence 3344556678888888888875 56876543221 12233345556778889999999 9999999888
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 103 LIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
++.+++..++....+.. ..+. .+...-+....+.....+....+.+|.+|++ .|+++.
T Consensus 373 ~~~~~~~~~l~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~------~R~~~~ 430 (502)
T TIGR00887 373 FILTVLFFVLGFAYNHL---------------STHG-FLAIYVLAQFFANFGPNATTFIVPGEVFPTR------YRSTAH 430 (502)
T ss_pred HHHHHHHHHHHHHHHhc---------------chhH-HHHHHHHHHHHHhcCCCchhhhhhhccCchh------HHHHHH
Confidence 77777666555432100 0111 1111111112222233456677789999998 599999
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcc----------cchhHHHHHHHHHHHHHHHH
Q 007932 183 NWWMFSSFIGALCATLGLVYIQEN----------LGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~----------~~~~~~f~~~~~~~~~~~~~ 226 (584)
++.+....+|++++|.+.+++.+. .++...|++.++..+++.++
T Consensus 431 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 431 GISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999998773 23445666666555555443
No 193
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.85 E-value=2.6e-08 Score=105.81 Aligned_cols=173 Identities=10% Similarity=0.049 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHH-HHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWS-GVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
.+..+...++..........+.+.|+.+++|+++.+.+++..... ++..++.+++|++.||+ |||+.+.++.++..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 333333334433333323334455677789999999998876654 45788899999999999 9999888777666555
Q ss_pred HHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHH----HHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 109 MILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSL----YIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+.+...... ..+.+.+.+.. +..|++.+...+....++.+.+|.++ + +.
T Consensus 290 ~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~ 343 (402)
T PRK11902 290 NLGYWVLAVT----------------PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----AL 343 (402)
T ss_pred HHHHHHHHhc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HH
Confidence 4433221100 02234344433 34566677777888888888887552 3 44
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
++...++|..+++.++|++.+..||+..|.+.+++.+++.+..+.
T Consensus 344 ~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 344 LSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 444556777767778999999999999999888776666555433
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.83 E-value=4.8e-08 Score=103.72 Aligned_cols=154 Identities=13% Similarity=0.043 Sum_probs=110.8
Q ss_pred HHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007932 46 GIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTC 125 (584)
Q Consensus 46 ~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (584)
....++|.|+++..+ ++.+.+++.+...++......+.+++.||..+.++.+..+.++..++..++...
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---------- 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---------- 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----------
Confidence 345677888876655 667888887777666665555556666553276777778877777777666654
Q ss_pred CCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 126 TNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
++.+.+.+..++.+++.+...|..++++.|..|++ +|++++++++...++|..+||.++|++.+
T Consensus 295 ----------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 295 ----------SNLQQLFTLICLFYIGSIIAEPARETLSASLADAR------ARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc------cchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 23455666667788888888889999999999987 59999999999999999999999999987
Q ss_pred cc---c-hhHHHHHHHHHHHHHHHH
Q 007932 206 NL---G-WGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 206 ~~---~-~~~~f~~~~~~~~~~~~~ 226 (584)
.. + ....++..++..++..+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 359 LGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHhhcCCcchHHHHHHHHHHHHHHH
Confidence 63 2 244555444444444433
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.81 E-value=4.7e-08 Score=117.74 Aligned_cols=182 Identities=11% Similarity=-0.077 Sum_probs=134.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.++..++..++.++..+++.+++|.|+++.+|.++.+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 5567777777777777788888999999999999999999999999999999999999999988 777766666655555
Q ss_pred HHHHHHHhhhc--c-ccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 108 GMILLTMAASL--K-FMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 108 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
+.+.+.+.... . ...-.+ ..+. ....+.+.+.++.++.|++.+...+...+++.+.+|++ .|+++++.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g~ 374 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKS--ILVF-LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIAA 374 (1140)
T ss_pred HHHHHHhcccccccccccccc--hhhh-hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeHH
Confidence 54444432000 0 000000 0000 00033556777888899999999999999999999998 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhc-ccchhHHHHHHHHH
Q 007932 185 WMFSSFIGALCATLGLVYIQE-NLGWGLGYGIPTAG 219 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~-~~~~~~~f~~~~~~ 219 (584)
+++...+|..+++++.+.+.. ..++...|++.++.
T Consensus 375 ~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 375 NNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999988863 44566666554443
No 196
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.81 E-value=2.6e-07 Score=93.53 Aligned_cols=153 Identities=12% Similarity=0.045 Sum_probs=105.7
Q ss_pred hhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcc
Q 007932 57 SQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTS 136 (584)
Q Consensus 57 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (584)
+..|++..+++.+.........+..++.|.++||+ ||||.-++.++++.++.+.-- . +
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~--------------------~ 119 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-S--------------------S 119 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-c--------------------c
Confidence 46899999999999999999999999999999999 999999999999888875322 2 5
Q ss_pred hHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh-hHHhHhHHHHhhhhhhhhcccch--hHHH
Q 007932 137 QIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM-FSSFIGALCATLGLVYIQENLGW--GLGY 213 (584)
Q Consensus 137 ~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~--~~~f 213 (584)
+...++++|++.|++.+...++..+.....+..+.-+. ...+.-++... +...+-++++..++-++.+..+. ..+|
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF 198 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPF 198 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchH
Confidence 68889999999999999999888877655443221000 02233333222 11122233334455555555443 6788
Q ss_pred HHHHHHHHHHHHHHHHhCC
Q 007932 214 GIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~ 232 (584)
.......+++.+++....+
T Consensus 199 ~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 8887777766665554433
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.81 E-value=2.9e-08 Score=107.05 Aligned_cols=163 Identities=14% Similarity=0.109 Sum_probs=124.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++....+.++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 5566667777777777777777777788888888766555545444667788999999999998 999999999988888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhc-ccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERN-LKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~ 186 (584)
+.+++.+.. ..+.+.+++..++.|+|.+...+...++.+|..|.++.+..+ +.+..++.++
T Consensus 307 ~~~~~~~~~------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~ 368 (448)
T PRK09848 307 GYLLFFWVS------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFS 368 (448)
T ss_pred HHHHHHHcC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHH
Confidence 877666531 134566677778889999999999999999998865421111 3588889999
Q ss_pred hHHhHhHHHHhhhhhhhhcccch
Q 007932 187 FSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
+...+|..+|+.+.+.+.+..||
T Consensus 369 ~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 369 FTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999998887655444
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.79 E-value=1e-07 Score=100.96 Aligned_cols=162 Identities=12% Similarity=-0.041 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 007932 39 FERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASL 118 (584)
Q Consensus 39 ~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~ 118 (584)
+.+..........+.|+++.+|.++.+.|.+.....++..++.++.+++.||. ++|+++..+.++ .+....+...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~--- 290 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ--- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH---
Confidence 33444555556677888889999999999999999999999999999999998 999888877533 3333333332
Q ss_pred cccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhh
Q 007932 119 KFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATL 198 (584)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 198 (584)
.+.+...+..++.|++.+...+..++.+.+..|++. .++++.+..+...++|..++..
T Consensus 291 -----------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 291 -----------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred -----------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHH
Confidence 335556667778899988888888888888655442 3799999999999999999998
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 199 GLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 199 ~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+.+.+ ...|-+..+.+.++..++.+.+.+
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 88866 457777777776666555544433
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.77 E-value=2e-07 Score=97.81 Aligned_cols=167 Identities=13% Similarity=-0.014 Sum_probs=113.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchh---HHHHH-HHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRF---WTFTL-SSL 103 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk---~~~~~-~~~ 103 (584)
+.+|.+....++....+|++.+++|.|+++ .|++.. .+.......+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888888999999999999999999964 677754 454444444444433 57888886 543 33232 333
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
+.+++....... .+.....+...+.+++.....+...++.+|.+|++ .|+++.+
T Consensus 266 ~~a~~~~~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~rgt~~G 319 (368)
T TIGR00903 266 LIAAFFLALAFE--------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE------LHGKAAG 319 (368)
T ss_pred HHHHHHHHHHHc--------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh------hcCcccc
Confidence 333333333322 11223344445566667777777889999999998 5999999
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
+.+...++|+..+|.+.+.+.. +.+..|.+.++..+++.+...
T Consensus 320 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 320 AIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888774 666677766666555555543
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.77 E-value=2.9e-08 Score=107.80 Aligned_cols=165 Identities=13% Similarity=0.020 Sum_probs=118.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++.++...++.+...+......+.|.+..++ +....+.......++..++.++.++++||+ |+|++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 666777777777777777666666545554444 555666666666788889999999999999 999999988887676
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhh-cccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYER-NLKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~ 186 (584)
+.+......-.+ ..+.+.+++.-++.|++.+...+...++++|..|.++-+.. ++.+..++.+.
T Consensus 309 ~~~~~~~~~~~~---------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~ 373 (473)
T PRK10429 309 SCGVLLLMGLAA---------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQT 373 (473)
T ss_pred HHHHHHHHhccC---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHH
Confidence 665544321000 13455666677788899999999999999999875432111 12455788999
Q ss_pred hHHhHhHHHHhhhhhhhhcccch
Q 007932 187 FSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
+...+|..+++.+.|++.+..|+
T Consensus 374 ~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 374 MVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998765554
No 201
>TIGR00898 2A0119 cation transport protein.
Probab=98.76 E-value=3.7e-08 Score=107.88 Aligned_cols=143 Identities=12% Similarity=0.046 Sum_probs=102.8
Q ss_pred hcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcch
Q 007932 58 QLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQ 137 (584)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (584)
.++.+.. .......+...++.++.+++.||+ |||+++.++.++.+++.+++.+..+ ..
T Consensus 352 ~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~------------------~~ 409 (505)
T TIGR00898 352 NLGGNIY---LDLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV------------------DL 409 (505)
T ss_pred ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC------------------Cc
Confidence 4454433 233344566778888999999998 9999999998888888776665421 11
Q ss_pred HHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHH
Q 007932 138 IAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPT 217 (584)
Q Consensus 138 ~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~ 217 (584)
.+...+..++.+++.+...+....+.+|.+|++ .|++++++.+....+|+.++|.+.+ +.+ .++..++.+.+
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~ 481 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTV------VRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFG 481 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH------HHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHH
Confidence 233444445556666777788889999999988 5999999999999999999999988 443 45666777766
Q ss_pred HHHHHHHHHHHHh
Q 007932 218 AGLLFSLVIFYIG 230 (584)
Q Consensus 218 ~~~~~~~~~~~~~ 230 (584)
+..+++.++.++.
T Consensus 482 ~~~~~~~~~~~~l 494 (505)
T TIGR00898 482 GLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHHcC
Confidence 6655555554443
No 202
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.73 E-value=3.1e-08 Score=106.19 Aligned_cols=177 Identities=14% Similarity=0.018 Sum_probs=123.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc-------hhHHH-H
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG-------RFWTF-T 99 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-------rk~~~-~ 99 (584)
+.+|.+.+..++++.+++.+..+.|.|+.+.+|+|..+.|+..++..+.+.+..+++|.++||... +||++ .
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 567899999999999999999999999999999999999999999999999999999999999722 12222 2
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
++....+++.+.+++.. + .+....++...+.-...|...+-...-..|..|.+ -+
T Consensus 338 i~~~~~ai~l~~l~~~~-----------------~-~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~-------a~ 392 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTS-----------------D-EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH-------AG 392 (466)
T ss_pred HHHHHHHHHHHeeeecC-----------------C-CcchHHHHHHHHHHHHcccchhhhHhhhhhccchH-------HH
Confidence 33333344444444331 0 11111222222211122322333333334444443 68
Q ss_pred eeeeeehhHHhHhHHHHhhhhhhhhcc---cchhHHHHHHHHHHHHHHHHHHH
Q 007932 180 SFFNWWMFSSFIGALCATLGLVYIQEN---LGWGLGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~f~~~~~~~~~~~~~~~~ 229 (584)
..+++.+...++.+.++|.+.+.+... ..|+..|++.++..+++-+++.+
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 899999999999999999999999842 36999999998887777655444
No 203
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.71 E-value=3.5e-07 Score=91.97 Aligned_cols=170 Identities=14% Similarity=0.142 Sum_probs=136.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..|.+.+..-+.++.+|.++.|+|.++. +.|+|..++|+..+...+......++.-++++|.-.+|+......+.+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 45788888899999999999999999987 56999999999999999999999999999999764788888888888888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
|...+.+.. .+...+. -+++|+|.|..+|..-+.+.+..++.+ +-++..+..+.
T Consensus 287 G~~G~~~~P-------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgmaQg 340 (395)
T COG2807 287 GLVGLLLAP-------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMAQG 340 (395)
T ss_pred HHHHHHHhh-------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHhhh
Confidence 888877763 1222222 478999999999999999999887654 46667777666
Q ss_pred HHhHhHHHHhhhhhhhhccc-chhHHHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENL-GWGLGYGIPTAGLLFSL 224 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~-~~~~~f~~~~~~~~~~~ 224 (584)
...+=+++||.+.|++-|.. +|+.+.+..+...++..
T Consensus 341 ~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 341 VGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred hhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 66677778899999998865 48877665555433333
No 204
>PRK11043 putative transporter; Provisional
Probab=98.70 E-value=4e-07 Score=96.57 Aligned_cols=153 Identities=10% Similarity=-0.023 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 35 GYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTM 114 (584)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~ 114 (584)
+........++.+..+.|.|++ +.|.+..+.++......++..++.++.+++.||+ |||+.+....+..+++.+.+..
T Consensus 210 ~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~ 287 (401)
T PRK11043 210 LIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWL 287 (401)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555666777787875 5799999999888888888889999999999998 9999876666555555443332
Q ss_pred hhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHH
Q 007932 115 AASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGAL 194 (584)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 194 (584)
..... ..+...+.+...+.+++.+...+...+...|..|++ ++++.++++.....++.
T Consensus 288 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~g~~~~~~~~~~~ 345 (401)
T PRK11043 288 ASLLS---------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQA-------TGKAAALQNTLQLGLCF 345 (401)
T ss_pred HHHhc---------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCccc-------ChHHHHHHHHHHHHHHH
Confidence 21100 123444555666778888888888888877877643 89999999988888888
Q ss_pred HHhhhhhhhhcccchhH
Q 007932 195 CATLGLVYIQENLGWGL 211 (584)
Q Consensus 195 ~g~~~~~~l~~~~~~~~ 211 (584)
+++.+.+.+.+......
T Consensus 346 ~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 346 LASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHccCCChhHH
Confidence 88888888876443333
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.69 E-value=8.4e-08 Score=99.98 Aligned_cols=145 Identities=9% Similarity=0.015 Sum_probs=111.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHH-HHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWS-GVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
.++.+.+..++.+..++...++.+.|+++ +|+++.+.+.+.+... ++..++.+++|+++||+ |||+.++++.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 36666667777788888899999999986 8999999988887665 56789999999999999 999999988887777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..+..+..+..... + ....+.+.+..+.++.+++.+...+...+++.|.+|++ +|++.+++++.
T Consensus 288 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~ 352 (356)
T TIGR00901 288 TNAGFVWLASNGHHD--------G-ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPK------FGATQMALLSS 352 (356)
T ss_pred HHHHHHHHHhcCccc--------c-cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC------ccHHHHHHHHH
Confidence 666555432100000 0 00023456777778889999999999999999999999 59999998776
Q ss_pred HHh
Q 007932 188 SSF 190 (584)
Q Consensus 188 ~~~ 190 (584)
..|
T Consensus 353 ~~~ 355 (356)
T TIGR00901 353 LSA 355 (356)
T ss_pred HHh
Confidence 654
No 206
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.67 E-value=4e-07 Score=96.27 Aligned_cols=146 Identities=11% Similarity=0.034 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007932 40 ERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLK 119 (584)
Q Consensus 40 ~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~ 119 (584)
..........+.+.|+.+++|+++.+.+.......++..++.++.|++.||+ |||+.+.++.++..++.+.+.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 291 (392)
T PRK10473 215 SVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSPS-- 291 (392)
T ss_pred HHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 3333344455567778888999999999988899999999999999999998 9999999998888888777666521
Q ss_pred ccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhh
Q 007932 120 FMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLG 199 (584)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 199 (584)
.....+....+..|++.+. +.. ...+..|.+ +|+ +..+....++..+++.+
T Consensus 292 ----------------~~~~~~~~~l~~~g~~~~~--~~~--~~~~~~~~~------~~~---g~~~~~~~~~~~~g~~~ 342 (392)
T PRK10473 292 ----------------HAVSLFGITLICAGFSVGF--GVA--MSQALGPFS------LRA---GVASSTLGIAQVCGSSL 342 (392)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHh--HHH--HHHHhccCc------ccc---cHHHHHHHHHHHHHHHH
Confidence 1111222222233443332 222 223334443 233 33334455676777777
Q ss_pred hhhhhcccchhHHHHHHH
Q 007932 200 LVYIQENLGWGLGYGIPT 217 (584)
Q Consensus 200 ~~~l~~~~~~~~~f~~~~ 217 (584)
++++.+..|+...+.+.+
T Consensus 343 ~~~l~~~~g~~~~~~~~~ 360 (392)
T PRK10473 343 WIWLAAVLGISAWNMLIG 360 (392)
T ss_pred HHHHHHHhccchhHHHHH
Confidence 777777677654444333
No 207
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.67 E-value=3.2e-07 Score=91.94 Aligned_cols=172 Identities=13% Similarity=0.082 Sum_probs=114.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--C-----------------CchhhhhhHHHHHHHHHHHhhhHhHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQL--H-----------------EDTVSSVRNVNNWSGVVWITPLLGAYI 87 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~G~l 87 (584)
+|....+..+.+...+.||+.........+... + .+...--.=..+.++.-+-+.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 355667777888888999988766554433211 1 111122223445567777888999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccC
Q 007932 88 ADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQF 167 (584)
Q Consensus 88 aD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~ 167 (584)
.||+ |||+++....+++.+..+++.... ++.. ..-+++.+|++ .++.+.+.+.|..|++
T Consensus 405 verl-GRKkTMal~l~~f~iflfll~~c~---------------~rn~-~tvllf~araf----isg~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLLTTCK---------------TRNA-YTVLLFTARAF----ISGAFQVAYVYTPEVY 463 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHHHHhc---------------Ccch-hHHHHHHHHHH----HhchheEEEEecCccc
Confidence 9998 999999999999988887776542 1111 11234444444 4445567889999999
Q ss_pred CCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 168 DDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 168 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~ 227 (584)
|.. .|+.+.|....+..+|+++.|.++ ...+.. -..+..+.+...+++.++.
T Consensus 464 PTa------vRatgvGtcSsmaRIggI~~p~iA-~~~e~s-~sl~i~vy~~~~ilagIav 515 (528)
T KOG0253|consen 464 PTA------VRATGVGTCSSMARIGGIFSPVIA-MRAELS-TSLPIFVYGALFILAGIAV 515 (528)
T ss_pred chh------hhhcchhhhhhHHhhhhhhhhHHH-HHhccc-eeehHHHHHHHHHHHHHHh
Confidence 998 599999999999999999999988 333322 2334444444444444443
No 208
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.65 E-value=3e-08 Score=102.47 Aligned_cols=144 Identities=18% Similarity=0.187 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc-hhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHED-TVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
+|......+...+.++....+.+.|+.+.+|.+ ..+.+...+...++..++.++.|++.||+ |+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 344455555555677778889999999999999 78999999999999999999999999998 9988888877776666
Q ss_pred HHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhH
Q 007932 109 MILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFS 188 (584)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (584)
.+.+..... ..+....++..++.|++.+...+...+++.|.+|++ +++++.+..+..
T Consensus 287 ~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~ 343 (352)
T PF07690_consen 287 ALGLLLLPF-----------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE------YRGTAFGLFNSI 343 (352)
T ss_dssp HHHHCCSHH-----------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC------HHHHHHHHHHHH
T ss_pred HHHHHHHHH-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHH
Confidence 655554421 123455666777889999999999999999999988 699999999999
Q ss_pred HhHhHHHHh
Q 007932 189 SFIGALCAT 197 (584)
Q Consensus 189 ~~~g~~~g~ 197 (584)
.++|..+||
T Consensus 344 ~~~~~~igP 352 (352)
T PF07690_consen 344 GSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
Confidence 999999987
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=1.2e-07 Score=102.98 Aligned_cols=176 Identities=16% Similarity=0.088 Sum_probs=150.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc--hhHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG--RFWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--rk~~~~~~~~~~ 105 (584)
+..+++.....+..++++....+++.|.. ..+.+..++..+.++..+...++.++.|+++|+. . ++.++.++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 55677788888889999988889998977 8899999999999999999999999999999997 6 455666666676
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+++...+... .+.+.+++.-.+.|+..|...+..+..+.|..+.+ +...++|+.
T Consensus 376 gl~~~~~p~~--------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~Gl~ 429 (509)
T KOG2504|consen 376 GLARLFLPFA--------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYGLL 429 (509)
T ss_pred HHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh------hcchHHHHH
Confidence 7666666665 44677888888899999999888888999999988 699999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccc-hhHHHHHHHHHHHHHHHHHHHhC
Q 007932 186 MFSSFIGALCATLGLVYIQENLG-WGLGYGIPTAGLLFSLVIFYIGS 231 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 231 (584)
.....++..+||.+.|++.+..+ |...|+..++..+++..+++...
T Consensus 430 l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 430 LLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999988877 99999999988888877766654
No 210
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.64 E-value=3.4e-07 Score=96.05 Aligned_cols=150 Identities=10% Similarity=-0.045 Sum_probs=98.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+..+....+...+.+.+..+.+.++.+.+|.++.+.+.......++..++.++.|++.||+ |||+++.++.++..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 194 KRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFI 272 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 3345555555666666677777777788888999999999999999999999999999999998 999999988876544
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
..+.+...... ..+.+...++..+.+.+.+...+.....+.|..| + .++++.+..+.
T Consensus 273 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~g~~~~~~~~ 329 (377)
T PRK11102 273 MGIWLVVSALL----------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-H------MAGTASSLAGT 329 (377)
T ss_pred HHHHHHHHHHH----------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-c------cchHHHHHHHH
Confidence 33332222100 0223334444444444455555555566677766 3 37777776554
Q ss_pred H-HhHhHHHHhhhhh
Q 007932 188 S-SFIGALCATLGLV 201 (584)
Q Consensus 188 ~-~~~g~~~g~~~~~ 201 (584)
. ..+|..+++++++
T Consensus 330 ~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 330 LRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHh
Confidence 3 3456666665543
No 211
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.59 E-value=2.1e-07 Score=97.05 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=106.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+.+....+......+++..+.+.|+++.+|.++.+++.......+...++.+++|+++||+ |||+.+..+.....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~ 303 (366)
T TIGR00886 225 RHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAM 303 (366)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHH
Confidence 3455555666666666778888899999999999999999999999999999999999999998 999988888777666
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++.+... +..+.+.+.+...+.+++.|...+...+++++.+|.+ +++..++.+.
T Consensus 304 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~g~~~g~~~~ 360 (366)
T TIGR00886 304 GAFLVVLGLV----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRA-------TGAVSGLVGA 360 (366)
T ss_pred HHHHHHhcCC----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchhh-------cccHHHHHHH
Confidence 6655554321 0013445555556666666776677778888888743 8998888877
Q ss_pred HHhHhH
Q 007932 188 SSFIGA 193 (584)
Q Consensus 188 ~~~~g~ 193 (584)
..++|+
T Consensus 361 ~~~~g~ 366 (366)
T TIGR00886 361 IGNLGG 366 (366)
T ss_pred hccCCC
Confidence 777653
No 212
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.58 E-value=2.8e-07 Score=98.08 Aligned_cols=192 Identities=10% Similarity=0.066 Sum_probs=134.0
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
..+..++.+.+.+.+.+..++.-...+.+..+.+-++-|++..++.+..........+..+.+.++.||+ |||+.++++
T Consensus 263 ~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~ 341 (485)
T KOG0569|consen 263 KNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLIS 341 (485)
T ss_pred cCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHH
Confidence 3345556677777777777776555555555556667799999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcch-HH-HHHHHHHHHHHhccc-ccccccccccccCCCCChhhhccc
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQ-IA-FFYSSLYIIAIGAGG-TKPNISTFGADQFDDFNPYERNLK 178 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~gi~~g~-~~~~~~~~~~~~~~~~~~~~~~~r 178 (584)
..+..+..+++.....+... ... .+ ..+++.++..++.+. ..|...-+.+|++|+.. |
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~-------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R 402 (485)
T KOG0569|consen 342 LSLMAVALLLMSIALFLSNS-------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------R 402 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------h
Confidence 99888888777766432220 000 11 123333333333222 35788899999999984 9
Q ss_pred ceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCce
Q 007932 179 VSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIY 234 (584)
Q Consensus 179 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 234 (584)
..++++......+..++..+.-..+.+.+|- ..|.+..+...+..+..+...|+.
T Consensus 403 ~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 403 SAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 9999988888888887776666777776664 455555555555555555544443
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.57 E-value=8.7e-07 Score=93.70 Aligned_cols=176 Identities=10% Similarity=0.003 Sum_probs=131.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|+..+.++..+......-....+.+.|+++.-|.+....+.+.+...+.-.+.-.+.+++..|+ |-|++++++++..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 4455556666777777777788889998865447767777666666667777778889999999 999999999999888
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHH----HHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAF----FYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
=..+.+...+ +.+. ...+-.+.|+..+....+...++.+..|++ .|+++.+
T Consensus 286 R~~l~a~~~~-------------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~------~~at~Q~ 340 (400)
T PF03825_consen 286 RWLLYAYFSD-------------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE------LRATAQG 340 (400)
T ss_pred HHHHHHHhcC-------------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc------chHHHHH
Confidence 8888877621 1222 223345689999999999999999999998 5999999
Q ss_pred eehhH-HhHhHHHHhhhhhhhhcccchh------HHHHHHHHHHHHHHHHHHH
Q 007932 184 WWMFS-SFIGALCATLGLVYIQENLGWG------LGYGIPTAGLLFSLVIFYI 229 (584)
Q Consensus 184 ~~~~~-~~~g~~~g~~~~~~l~~~~~~~------~~f~~~~~~~~~~~~~~~~ 229 (584)
++... ..+|..+|..++|++.+++|-+ ..+.+.++..++..++++.
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 87765 5799999999999999887644 3444555544444444443
No 214
>PRK09669 putative symporter YagG; Provisional
Probab=98.57 E-value=3.3e-07 Score=98.77 Aligned_cols=162 Identities=12% Similarity=0.068 Sum_probs=107.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|..+.++...++...+........+.|.+..++. +...+.......+...++.+++++++||+ |+|+.+.++.+..++
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVI 306 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3444555555554444443333333333434432 33334445555677778888999999998 999999988776554
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhc-ccceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERN-LKVSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~ 186 (584)
+.....+.. ..+.+.+++..++.|++.+...+..+++++|..+.++.+..+ +.+..++.++
T Consensus 307 ~~~~~~~~~------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~ 368 (444)
T PRK09669 307 LSALIFFIP------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNL 368 (444)
T ss_pred HHHHHHHhC------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHH
Confidence 433333221 134666777778899999999999999999999854422111 3456678888
Q ss_pred hHHhHhHHHHhhhhhhhhcccch
Q 007932 187 FSSFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~ 209 (584)
+...+|..+|+.++|++.+..|+
T Consensus 369 ~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 369 FAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998776555
No 215
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.55 E-value=1.1e-06 Score=92.48 Aligned_cols=139 Identities=11% Similarity=0.125 Sum_probs=100.1
Q ss_pred ccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccce
Q 007932 368 SLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPM 447 (584)
Q Consensus 368 ~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (584)
.....+..+-++.-+++.+++.++++- ..+..|+++.++=++....+ .
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~kiGHv-----------~v~~lgLa~~~~Rf~~~S~L---------------------~ 457 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEKIGHV-----------NVMYLGLACNVGRFLYYSYL---------------------Q 457 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHHhccc-----------ceeeehhhHHHHHHHHHHHh---------------------c
Confidence 445556666666666666555444433 23677877777777666666 4
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHH-HHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCC
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFT-SGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLN 526 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~-~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~ 526 (584)
++|..++.=.+.|+....+......|+...+|++.|.+++|+.. ....+|-.+|.++.+.+....
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-------------- 523 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-------------- 523 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee--------------
Confidence 77788888899999999999999999999999999999999987 555677777777776664311
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 007932 527 DCHLDYYYGFLMVISILNLGAFFWASSR 554 (584)
Q Consensus 527 ~~~~~~~f~~~~~~~~~~~l~~~~~~~~ 554 (584)
+....|..+++.+++.++++..+.+.
T Consensus 524 --g~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 524 --GARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22345788888888777666655443
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.2e-06 Score=92.61 Aligned_cols=162 Identities=18% Similarity=0.169 Sum_probs=131.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.+..++...++...++.-..+...-|.+..+|.+.............+..++.++..++.+|+ |+|+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 5566666677777777777777777778888898888888888888888888899999999999 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccc-ceeeeeeh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLK-VSFFNWWM 186 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~ 186 (584)
+.+++.+.. ..+..++++..++.++|.+...+..+++++|..+..|-+..+|| |..++.+.
T Consensus 315 ~~~~~~f~~------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t 376 (467)
T COG2211 315 GYLLLYFTP------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT 376 (467)
T ss_pred HHHHHHhhc------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH
Confidence 998888873 25678889999999999999999999999999987664444444 55666778
Q ss_pred hHHhHhHHHHhhhhhhhhcccc
Q 007932 187 FSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
+..=+|.+++..+.|++....|
T Consensus 377 F~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 377 FFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 8888888888888888765443
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.48 E-value=1.6e-06 Score=92.35 Aligned_cols=163 Identities=9% Similarity=-0.071 Sum_probs=114.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQ-LHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
..+..++..++......++.++++.|+.+. .+.+....+...+.+..+..++.+++|++.||+ ++||++.+..++..+
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 344445555555555556778888998643 244445555566666788899999999999998 999998888777777
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
..++..... +.. ..+...+.|+..+.++|+..+...+..+++. ..+.+...+
T Consensus 312 ~~ll~~~~~--------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~l~~ 363 (410)
T TIGR00885 312 LCLGSIFAG--------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAGLVM 363 (410)
T ss_pred HHHHHHHcC--------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHHHH
Confidence 766666542 111 3456667788889999999999999998662 222333333
Q ss_pred HHhHhHHHHhhhhhhhhccc------chhHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENL------GWGLGYGIPTAGLL 221 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~------~~~~~f~~~~~~~~ 221 (584)
+ .+|+.+.|.+.|++.+.. +.+..|+++.++.+
T Consensus 364 ~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 364 A-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred H-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 3 399999999999999854 47778887766533
No 218
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.45 E-value=1.2e-06 Score=91.54 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=141.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 27 WKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLH---EDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
-|++|.+.+........+++.-...+.|.+..++ .++...|...+...+.-.+.-.+..++.+|+ |.|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 4678888887777777878777778888876544 3445577777777778888888899999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
++++=.++++++ ++.+.+.+...+.++-.+.....+.-++++.+|++ ..++...
T Consensus 298 i~~iRi~~~~~~--------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r------lsAt~y~ 351 (412)
T PF01306_consen 298 IMAIRIIGSGFA--------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR------LSATLYL 351 (412)
T ss_dssp HHHHHHHHHHT----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG------GHHHHHH
T ss_pred HHHHHHHHHhhh--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------HHHHHHH
Confidence 988888888877 56788999999999999999999999999999987 3566666
Q ss_pred e-ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 184 W-WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 184 ~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+ ++....+|..+.+.++|++.++.|++..|++.+.+++...++..+.
T Consensus 352 v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 352 VGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheee
Confidence 5 4788899999999999999999999999988887766555554443
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.42 E-value=4.8e-06 Score=88.08 Aligned_cols=147 Identities=9% Similarity=-0.040 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 007932 39 FERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASL 118 (584)
Q Consensus 39 ~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~ 118 (584)
....+........+.|+++.+|.++.+.++.......+..++.++.+++.||+ +|+... +.....++.+........
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~ 294 (394)
T PRK11652 218 GTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWF 294 (394)
T ss_pred HHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHh
Confidence 33333444445566788888999999999888888888888889999999998 743322 222222222222111000
Q ss_pred cccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhh
Q 007932 119 KFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATL 198 (584)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 198 (584)
...+.+.+.+..++.+++.+...|...+...|.+|++ ++...+..+...++|+.+++.
T Consensus 295 ---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 295 ---------------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred ---------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHHHHHH
Confidence 0123455677778889999998999999999988743 788899999899999999999
Q ss_pred hhhhhhcccchh
Q 007932 199 GLVYIQENLGWG 210 (584)
Q Consensus 199 ~~~~l~~~~~~~ 210 (584)
+++.+.....+.
T Consensus 353 ~~~~~~~~~~~~ 364 (394)
T PRK11652 353 LSAMLPQTGQFS 364 (394)
T ss_pred HHHHccCCchHH
Confidence 998887654333
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.36 E-value=1.2e-05 Score=78.69 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=101.8
Q ss_pred HHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcC
Q 007932 52 VNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICS 131 (584)
Q Consensus 52 ~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (584)
...+++++|+|..|...+...-.++..++ ++.|.+.|++ |.+.++.+|.+...+|+.++....+-..
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i----------- 91 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI----------- 91 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc-----------
Confidence 45678999999999999999999999875 8889999999 9999999999999999988887642110
Q ss_pred CCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 132 KTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 132 ~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
...+.|.+.+..++.+.+.+......-....+.||++ ||.+.++.-....+++.+-..+-..+-+
T Consensus 92 --~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 92 --PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred --CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 1245666666666666766665555555566889865 9999999988888888876555444433
No 221
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.32 E-value=8.3e-08 Score=99.21 Aligned_cols=143 Identities=16% Similarity=0.185 Sum_probs=113.7
Q ss_pred ccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCcc
Q 007932 366 AASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIV 445 (584)
Q Consensus 366 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (584)
.+.++....+..++++|+.+++.+|+-|++ .+.+|..+..++.+..++..
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~-----------v~~vG~~iW~~Av~~~~fs~------------------- 119 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKR-----------VIAVGIFIWTLAVFASGFSN------------------- 119 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcce-----------EEeeHHHHHHHHHHHHHHHH-------------------
Confidence 456777778888999999988865555543 37889999998888887762
Q ss_pred ceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCC
Q 007932 446 PMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNL 525 (584)
Q Consensus 446 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~ 525 (584)
++|.+.+.=.+.|+|+..+.|...++++|.+|++.|++..+++++....|+.+|......+.+..
T Consensus 120 --~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~------------- 184 (493)
T KOG1330|consen 120 --HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT------------- 184 (493)
T ss_pred --HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-------------
Confidence 45667777889999999999999999999999999999999999999999999877776664322
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 007932 526 NDCHLDYYYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 526 ~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
+++.+.|...++++++++++.+++.++.
T Consensus 185 --~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 185 --FWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred --cceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 1235668888898888877766665543
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.29 E-value=8.1e-06 Score=84.12 Aligned_cols=173 Identities=17% Similarity=0.229 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 33 LVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILL 112 (584)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~ 112 (584)
.+..-+...+++++=-..+-+|--+.+|++..++......+..+..++-.+.|++..|-.++|++-.+++...+++..+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 33334444555555556666888899999999999999999999999999999998854489999999999888888777
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
.++.. ..+.+.+..+.++.|++.|.+....-+.+.|...++ +.+.+++.+...+.+.
T Consensus 293 i~a~~-----------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~------~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 293 ILAGP-----------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG------RAGLFMGAWGAAQAIA 349 (403)
T ss_pred HHHHh-----------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc------chhHHHHHHHHHHHHH
Confidence 76642 145788999999999999999999999999999877 5799999999999999
Q ss_pred HHHHhhhhhhhhc----------ccchhHHHHHHHHHHHHHHHHHH
Q 007932 193 ALCATLGLVYIQE----------NLGWGLGYGIPTAGLLFSLVIFY 228 (584)
Q Consensus 193 ~~~g~~~~~~l~~----------~~~~~~~f~~~~~~~~~~~~~~~ 228 (584)
..+|..++|.+.+ ..+|...|.+.++..++++.+..
T Consensus 350 ~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 350 RGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888754 13477778887777666665543
No 223
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.28 E-value=7.2e-06 Score=72.06 Aligned_cols=133 Identities=19% Similarity=0.240 Sum_probs=91.6
Q ss_pred cchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeeh
Q 007932 371 SFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIF 450 (584)
Q Consensus 371 ~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (584)
....++.++..++.+++.|+..+|+ .+..+..+..++.+..... .+.+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~-----------~~~~~~~~~~~~~~~~~~~---------------------~~~~ 52 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKP-----------VLLVGLFIFVLSTAMFALS---------------------SNIT 52 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhH-----------HHHHHHHHHHHHHHHHHHh---------------------ccHH
Confidence 3445566777777777766655542 3555666666665544433 2344
Q ss_pred hhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccch
Q 007932 451 WLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHL 530 (584)
Q Consensus 451 ~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~ 530 (584)
......++.+++.....+..+.++.|..|++.|+++.++.+....+|..+++.+.+.+.+. .++
T Consensus 53 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~~ 116 (141)
T TIGR00880 53 VLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF----------------LGW 116 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc----------------cch
Confidence 5566678888888888899999999999999999999999999999999999988776421 123
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 007932 531 DYYYGFLMVISILNLGAFFWA 551 (584)
Q Consensus 531 ~~~f~~~~~~~~~~~l~~~~~ 551 (584)
.+.|++.+.+.++..+..+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 117 RAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 445666666666555444433
No 224
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.27 E-value=4.3e-06 Score=90.88 Aligned_cols=186 Identities=11% Similarity=0.049 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh----hhhHHHHHHHHHHHhhhHhHH----HhhcccchhHH--HH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVS----SVRNVNNWSGVVWITPLLGAY----IADTYIGRFWT--FT 99 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~G~----laD~~~Grk~~--~~ 99 (584)
+..++....+.++.+.-..+.++.|..+..+.+... .+++.+...+...+.+++..+ +.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344455555666666666676777776654443222 567777777777777766554 45541133333 37
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
+|+++.+++.+.+++..... +.+...+.+.+.+..++.++|.....|...+++.+..|++ .|+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~-----------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~------~~g 416 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA-----------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR------LMG 416 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH------HHH
Confidence 78888888887776542110 0111246888999999999999999999999999999988 599
Q ss_pred eeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 180 SFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
+.++.+.....+|..+++.+........+|...|...++..++..++.+...+
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888887766667888887777666655555554433
No 225
>PRK11462 putative transporter; Provisional
Probab=98.25 E-value=8.1e-06 Score=88.35 Aligned_cols=160 Identities=11% Similarity=0.026 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 30 CAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
.+.++...++..............|.+..+|. +...+.+...+.++..++.+++++++||+ |+|+++..+..+..+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~ 307 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVIS 307 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 34444444444444343333333344434443 33445566677788888999999999998 99988776555444433
Q ss_pred HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccc-ceeeeeehhH
Q 007932 110 ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLK-VSFFNWWMFS 188 (584)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~ 188 (584)
++..+.. ..+...+++..++.|++.+...+...++++|..+.++-+..+|| +..++.+.+.
T Consensus 308 ~~~~~~~------------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~ 369 (460)
T PRK11462 308 LAMFFVP------------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFV 369 (460)
T ss_pred HHHHHhc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHH
Confidence 3332221 02222344445566777777777778889998875542222233 3335777788
Q ss_pred HhHhHHHHhhhhhhhhcccch
Q 007932 189 SFIGALCATLGLVYIQENLGW 209 (584)
Q Consensus 189 ~~~g~~~g~~~~~~l~~~~~~ 209 (584)
..+|..+|+.++|++.+..|+
T Consensus 370 ~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 370 LKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 999999999888887654443
No 226
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=0.00014 Score=77.13 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHH
Q 007932 70 VNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIA 149 (584)
Q Consensus 70 ~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 149 (584)
..+-.....+.+++++.+.|++ |.|+.+.++...+..-.+.... .|.+.++++-.+.|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~---------------------~N~y~~yfssallG 113 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF---------------------PNSYYLYFSSALLG 113 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh---------------------cchHHHHHHHHHhh
Confidence 5566777888999999999998 9999999998887776655554 45677899999999
Q ss_pred HhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHH
Q 007932 150 IGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCA 196 (584)
Q Consensus 150 i~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 196 (584)
+|.+..+...-.++++..+++. +.+..++.-.....+..+|
T Consensus 114 ~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 114 FGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIG 154 (461)
T ss_pred hhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988773 5555555444444444444
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.24 E-value=8.7e-06 Score=84.28 Aligned_cols=166 Identities=16% Similarity=0.098 Sum_probs=123.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcc---cchhHHHHHHH-H
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTY---IGRFWTFTLSS-L 103 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~~~~~-~ 103 (584)
+.++.+..+.+..++++-.=.+++++|++ .+|++-...+.+-....+...+.+|+.|..+||. +||||.++... +
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 67788888888888888877888889976 7799888888777777888889999999999983 38888777654 5
Q ss_pred HHHHHHHHHHHhhhccc-cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 104 IYVLGMILLTMAASLKF-MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
+.+++.++..+++.+.- +.+ +.. ..........++++.-+.-+..-..+...-++++|...+++ ++.++.
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd---~~~-~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~An 181 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGD---NER-KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTRAN 181 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcC---Ccc-cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhccc
Confidence 66777778777765442 111 110 00111344556666667777877888889999999998765 334499
Q ss_pred eeehhHHhHhHHHHhhhhhhh
Q 007932 183 NWWMFSSFIGALCATLGLVYI 203 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l 203 (584)
+++.+...+|+.+|...+++.
T Consensus 182 s~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 182 SVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhHHHHHHhcceeeeeccccc
Confidence 999999999999998777743
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.18 E-value=3e-05 Score=82.76 Aligned_cols=171 Identities=12% Similarity=-0.039 Sum_probs=113.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++...+...+....++.+..+.|.|+++.+|.+..+.++.......+..++..+.+++.++. +++|.......+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 5566666667777777788888889999999999999999988778888888888888876554 444444333333344
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
+..++....-.. ..+....+++.++.++|.+...|+.....- .+.+. .++++.+..+.
T Consensus 297 g~~l~~~~~~~~---------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~-----~~G~a~a~~~~ 354 (413)
T PRK15403 297 GLALLIVGNLLW---------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNL-----PKGTVSASLNM 354 (413)
T ss_pred HHHHHHHHHHHc---------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCC-----CCcHHHHHHHH
Confidence 443333221000 022333566777888888888877775332 22222 36888888888
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLF 222 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~ 222 (584)
....+..+++...+++..+ +-.++|.+..+...+
T Consensus 355 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 355 VILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 8888888888888888664 456666655554333
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.16 E-value=2.2e-06 Score=87.07 Aligned_cols=177 Identities=12% Similarity=-0.025 Sum_probs=131.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc--hhHHHHHHHHHHH
Q 007932 29 ACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG--RFWTFTLSSLIYV 106 (584)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--rk~~~~~~~~~~~ 106 (584)
.++...+...+.++..-..-+.+++++.+.+..+..+.|+.....++...++..+.|.++||+ + |......++++..
T Consensus 271 ~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 271 YILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVG 349 (464)
T ss_pred hHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHH
Confidence 355666666677777777788888999889886666999999999999999999999999999 9 6555555555555
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
.......+. .++..+++-++..+++.+...+..........+.+....-...+...++..
T Consensus 350 ~~~~~iP~~--------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad 409 (464)
T KOG3764|consen 350 VSSGPIPFA--------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIAD 409 (464)
T ss_pred HHhchhHhh--------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHH
Confidence 554444444 345667888888888887777666666666665543211113678888899
Q ss_pred hHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 187 FSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
.+..+|.++||.++|.+.+..|++|.-.+.++..++-.-+
T Consensus 410 ~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapv 449 (464)
T KOG3764|consen 410 AAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPV 449 (464)
T ss_pred HHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877777664444333
No 230
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.15 E-value=6.2e-05 Score=77.16 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=118.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|.++...++.++.--.=-++.++++.|+.+..|.+..++....+.+..+..++..++-++-.|+ ...|.+.+..+...+
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~il 314 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAIL 314 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 4445555555555444455678899999888999999999999999999999999999998898 888888777655444
Q ss_pred HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh
Q 007932 108 GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF 187 (584)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (584)
-.+...+. ++. .-+.+.++.|...+.++|++.+...+..|++. +.+.. .-.
T Consensus 315 l~~~~~l~--------------------~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~---~l~ 365 (422)
T COG0738 315 LLLAVALI--------------------GGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSG---LLV 365 (422)
T ss_pred HHHHHHHh--------------------cCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc-----cccce---eee
Confidence 44444443 222 23445667899999999999999999999553 23333 334
Q ss_pred HHhHhHHHHhhhhhhhhcccchhHHHH
Q 007932 188 SSFIGALCATLGLVYIQENLGWGLGYG 214 (584)
Q Consensus 188 ~~~~g~~~g~~~~~~l~~~~~~~~~f~ 214 (584)
+..+|+++.|.+-|++.+..|-...+.
T Consensus 366 maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 366 MAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eheecchHHHHHHHHHHHhhhhHHHHH
Confidence 567899999999999999988776665
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.14 E-value=2.5e-05 Score=77.78 Aligned_cols=152 Identities=18% Similarity=0.231 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHhhhhcCCch--hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007932 42 MAFYGIQSNLVNYLTSQLHEDT--VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLK 119 (584)
Q Consensus 42 ~~~~~~~~~~~~yl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~ 119 (584)
..........+.+. .+.+.+. ...++..+.+.+...++.++.|+++||+ |||+.++.+.....++.+++.+..+
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (338)
T COG0477 16 LDLGLLSPALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-- 91 (338)
T ss_pred HhcchHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--
Confidence 33333333444443 3444444 4778999999999999999999999999 9999888888765666555555421
Q ss_pred ccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCC-CChhhhcccceeeeeehh-HHhHhHHHHh
Q 007932 120 FMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDD-FNPYERNLKVSFFNWWMF-SSFIGALCAT 197 (584)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~~g~~~g~ 197 (584)
...+.+.+.|++.|++.+...+...+++.|.+|+ + +|+...+.... ...+|..+++
T Consensus 92 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 92 ----------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT------ERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred ----------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3477899999999999999999999999999987 3 47888887777 5778888888
Q ss_pred hhhhhhhcc--cchhHHHHHHHHH
Q 007932 198 LGLVYIQEN--LGWGLGYGIPTAG 219 (584)
Q Consensus 198 ~~~~~l~~~--~~~~~~f~~~~~~ 219 (584)
.+++.+... .+|+..|.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 150 LLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHH
Confidence 777766553 5788866655443
No 232
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=2.9e-05 Score=61.44 Aligned_cols=70 Identities=23% Similarity=0.199 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHH
Q 007932 33 LVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 104 (584)
+-...++...+.-.+.++++.|++ +.|+|+.++|.+.++..+...+++++.|+++||+ ||+|.++.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 344455566666677889999987 5899999999999999999999999999999999 988888776543
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.06 E-value=2.9e-05 Score=74.77 Aligned_cols=89 Identities=13% Similarity=0.025 Sum_probs=65.0
Q ss_pred HhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCC
Q 007932 54 YLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKT 133 (584)
Q Consensus 54 yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (584)
|+-+..|+...+++.+.-.......+...+.|-|+|+. ||||.-+.- .+.++++.+.-.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvty----citYiLsCiTKh---------------- 120 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTY----CITYILSCITKH---------------- 120 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeee----hHHHHHHHHhhc----------------
Confidence 45567788888888776666666777778889999998 999976544 444455555422
Q ss_pred CcchHHHHHHHHHHHHHhccccccccccccc
Q 007932 134 STSQIAFFYSSLYIIAIGAGGTKPNISTFGA 164 (584)
Q Consensus 134 ~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~ 164 (584)
.++...++++|.+-|+..+...+...+...
T Consensus 121 -SpqYkVLmVGR~LGGiaTsLLFSaFEsWli 150 (454)
T KOG4332|consen 121 -SPQYKVLMVGRVLGGIATSLLFSAFESWLI 150 (454)
T ss_pred -CCceEEEeehhhhhhHHHHHHHHHHHHHHH
Confidence 145567999999999999988877766543
No 234
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.05 E-value=0.0002 Score=74.78 Aligned_cols=173 Identities=13% Similarity=0.102 Sum_probs=116.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchhhhhhHHHH-HHHHHHHhhhHhHHHhhcccchhHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQ-LHEDTVSSVRNVNN-WSGVVWITPLLGAYIADTYIGRFWTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~~~~~~~~~-~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 105 (584)
+...++++..++..+-- .-+++..|+.+. .|++..|...-+-. ..-......++...+.|.+ |-|++++++.+..
T Consensus 5 ~~~~llc~~gf~~~frP--sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~ 81 (412)
T PF01770_consen 5 KITLLLCLFGFFKEFRP--SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHHHHHHhcCC--CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHH
Confidence 44455565555555532 357788899887 99998887643332 3334445667778899998 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.+...++.+. ++...+-+.-++-|++.+. ..+-.+++=...|++ +..++.+..
T Consensus 82 i~t~~lll~~--------------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~------~yq~vts~~ 134 (412)
T PF01770_consen 82 IITWLLLLFG--------------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKE------HYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHH--------------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHH------HHHHHHHHH
Confidence 8888887776 4566778888888888766 344556666666665 356667777
Q ss_pred hhHHhHhHHHHhhhhhhhhc--ccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFSSFIGALCATLGLVYIQE--NLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~--~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
....-+|-.++..++-.+.. ..++...+++......++.++.++.
T Consensus 135 raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777777777666655544 3346666666666666665554443
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.05 E-value=6.1e-05 Score=81.11 Aligned_cols=207 Identities=10% Similarity=-0.010 Sum_probs=142.1
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchh------h----hhhHHHHHHHHHHHhhhHhHHHhhc
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTS-QLHEDTV------S----SVRNVNNWSGVVWITPLLGAYIADT 90 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~------~----~~~~~~~~~~~~~~~~~~~G~laD~ 90 (584)
..++.+|.++.++.+.++.+++++.+..+.+.|+.+ .++-++. + ..+....+.+...+.+++--++.+|
T Consensus 252 ~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 252 AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446788999999999999999999999999999864 4443221 1 1233344555556667777888999
Q ss_pred ccch-hHHHHHHHHHHHHHHHHHHHhhhccc-cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCC
Q 007932 91 YIGR-FWTFTLSSLIYVLGMILLTMAASLKF-MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFD 168 (584)
Q Consensus 91 ~~Gr-k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~ 168 (584)
+ |+ |++..++.++.+++.+...+..+.++ ..+..+..-...++....+..++...+.|+..+.......+++++..+
T Consensus 332 ~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 332 W-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred h-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 8 95 77778888888888877765542111 000000000000011113556677778899999999999999999999
Q ss_pred CCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccc--hhHHHHHHHHHHHHHHHHHHHhCCc
Q 007932 169 DFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLG--WGLGYGIPTAGLLFSLVIFYIGSPI 233 (584)
Q Consensus 169 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (584)
++.+ +.|..+|+.+.+.-+...+..+..|.+.+.+| -.+.+.+.++..+++.+..+...|+
T Consensus 411 ~~~~----~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 411 NLGA----GQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccCC----CCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 5421 46999999999999999999887777655444 4567778888777777776665553
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.03 E-value=7.1e-06 Score=86.44 Aligned_cols=173 Identities=10% Similarity=-0.065 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007932 32 FLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMIL 111 (584)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~ 111 (584)
+.++..++..++.--+.+++--+++ +++-.+..-|........+-.+.-++.+++..|+ |+-+++.+++...++=.+.
T Consensus 375 lff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~ 452 (618)
T KOG3762|consen 375 LFFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLY 452 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHH
Confidence 3455566666666667777755554 6665555556555556666777788889999999 9999999999988888888
Q ss_pred HHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehh-HHh
Q 007932 112 LTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMF-SSF 190 (584)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ 190 (584)
+++. .|+|+.+..-+++|+..+..+.++.+++.+..|++ .+.++.++... .-.
T Consensus 453 ~S~L--------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~------l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 453 YSYL--------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPG------LRATAQGLLQGIFHG 506 (618)
T ss_pred HHHh--------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc------chHHHHHHHHHHhcc
Confidence 8887 67899999999999999999999999999999999 47777775544 447
Q ss_pred HhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 191 IGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 191 ~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
+|-.+|.+++|.+.+.+|-+..|.+.++..++.++.......
T Consensus 507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 899999999999999999899999888887777666555433
No 237
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.97 E-value=0.0033 Score=65.66 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=47.6
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
+.|.++...+.-|+..+.........+.+..|++.|..++|.....-.+|..++..+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444555556668888888888888888999999999999999888888888877776444
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.97 E-value=1.6e-05 Score=86.55 Aligned_cols=178 Identities=13% Similarity=0.055 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCch----hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHH-------HHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQLHEDT----VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWT-------FTLSSLIY 105 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~-------~~~~~~~~ 105 (584)
..+.++.+......++.|.++..+.+. ....++.+...+...+..++.|++.||+ |||+. +.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 444555555555667777764332221 1234455556667778888889999998 98874 77888887
Q ss_pred HHHHHHHHHhhh-ccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 106 VLGMILLTMAAS-LKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
+++.+.++.... ... .....+.+.+....++.|+|.+...|...+++.+..|++ .++.+++.
T Consensus 357 ~~~~~~~~~~~~~~~~-----------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~------~~g~~~g~ 419 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD-----------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH------LMGFILGM 419 (489)
T ss_pred HHHHHHHHHHHHhhcC-----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH------HHHHHHHH
Confidence 777654432110 000 001134666778888999999999999999999999988 59999999
Q ss_pred ehhHHhHhHHHHhhhhhhhhc----------ccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 185 WMFSSFIGALCATLGLVYIQE----------NLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~----------~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
++...++|..+|..++..... ...+.+.|...+...++..++++...+
T Consensus 420 ~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998777755421 112455666665555444444444333
No 239
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=1.1e-07 Score=102.60 Aligned_cols=182 Identities=14% Similarity=0.070 Sum_probs=109.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+.+...+....+.....+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++++.++.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 4455555555555444443444444455556666655 2223334455667777788999998 999999999988887
Q ss_pred HHHHHH-HhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcc-cccccccccccccCCCCChhhhcccceeeeee
Q 007932 108 GMILLT-MAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAG-GTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 108 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
+.+.++ .....+. ..+..+.. .++...+.....+ +..+....+.+|.+|.+ .|+++.++.
T Consensus 329 ~~~~~~~~~~~~~~-----------~~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~------~R~~~~~~~ 390 (451)
T PF00083_consen 329 CSLILGIIFFLGVS-----------SSSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTK------VRSTGIGLS 390 (451)
T ss_pred cccccccccccccc-----------cccccccc-cceeeeecccccccccccccccccccccccc------ccccccccc
Confidence 776665 1110000 00000111 1222222222222 33466678899999998 599999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+....+++.+++.+...+.+..+-...|.+.+...++..++.+..
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred cccccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 999999999999888888877663345555544444444444443
No 240
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.91 E-value=6.1e-05 Score=82.40 Aligned_cols=178 Identities=12% Similarity=0.073 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhh--hcCCch------hhhhhHHHHHHHHHHHhhhHh----HHHhhcccchhHHHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTS--QLHEDT------VSSVRNVNNWSGVVWITPLLG----AYIADTYIGRFWTFTLSSLI 104 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~--~l~~~~------~~~~~~~~~~~~~~~~~~~~~----G~laD~~~Grk~~~~~~~~~ 104 (584)
.+.....+|.+..-.+.++.. ..+.+. ...++..+...+...+..++. +++.||+ +..+.+.+|+++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 345556666666666666543 111221 124556666666666666665 6666666 777889999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNW 184 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (584)
.+++.+.+....+... .....+.+.+....++.|+|.+...|...+++.+..|++ .|++.++.
T Consensus 360 ~~l~f~~l~~~~~~~~-----------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~------~rg~~~g~ 422 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN-----------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR------LMGFIMGS 422 (500)
T ss_pred HHHHHHHHHHHHHhcC-----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH------HHHHHHHH
Confidence 9999888877643211 001134567888999999999999999999999999998 69999998
Q ss_pred ehhHHhHhHHHHhhhhhhhh----------cccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 185 WMFSSFIGALCATLGLVYIQ----------ENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~----------~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
+.....+|..++..+.+... ...++...|...++..++..++++...+
T Consensus 423 ~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 423 WFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777776655554221 1123567777666654444444444333
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.00011 Score=79.45 Aligned_cols=163 Identities=16% Similarity=0.123 Sum_probs=111.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhc----ccchhHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADT----YIGRFWTFTLSSL 103 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grk~~~~~~~~ 103 (584)
..+|...++.++.....|++..++|.|+++..|++..+++.....+.++..++.+++|+++|| . .+|..++....
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~ 351 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLC 351 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHH
Confidence 456888999999999999999999999998677999999999999999999999999999999 5 66666665554
Q ss_pred HHHH-HHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceee
Q 007932 104 IYVL-GMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 104 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
++.+ +.+.+.... .......+.+....+.+...++......+...++. ++-...
T Consensus 352 ~~~~~g~~~l~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~ 406 (495)
T KOG2533|consen 352 LYAIIGAISLLAAA--------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTV 406 (495)
T ss_pred HHHHHHHHHHHhhc--------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHH
Confidence 3333 333333321 12222222333344455555666677777776654 566666
Q ss_pred eeehhHHhHhHHHH-hhhhhhhhcccchhHHHHHH
Q 007932 183 NWWMFSSFIGALCA-TLGLVYIQENLGWGLGYGIP 216 (584)
Q Consensus 183 ~~~~~~~~~g~~~g-~~~~~~l~~~~~~~~~f~~~ 216 (584)
+.+..+.+.++.++ ++.-+.....++|...|...
T Consensus 407 ~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 407 SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 66665665555544 44444455557888888433
No 242
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.73 E-value=2.5e-05 Score=84.77 Aligned_cols=136 Identities=14% Similarity=-0.029 Sum_probs=107.0
Q ss_pred hhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCc
Q 007932 56 TSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTST 135 (584)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (584)
++.+|+++.+.|.......++..++..+.+++.+|+ +.|+++.++.++.+++.....+..+-..+. ...
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------~gi 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------FGI 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc----------cCC
Confidence 467999999999999999999999999999999998 999999999988888775543221000000 000
Q ss_pred chHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccc
Q 007932 136 SQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 136 ~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
++.+.+...-++.+++.+........++.+..|++ .+++.++++....++|..+++.+++.+.+..|
T Consensus 349 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~------~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 349 SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG------CESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC------ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 12233455566778888888888899999999988 58999999999999999999999999988766
No 243
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.67 E-value=0.0002 Score=80.45 Aligned_cols=136 Identities=10% Similarity=0.062 Sum_probs=94.2
Q ss_pred CccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh----hh-------hc
Q 007932 365 PAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRR----MH-------VI 433 (584)
Q Consensus 365 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~----~~-------~~ 433 (584)
..+.+.+...++..++.++..++.++..||+ .+.+|.++++++.++.++..... .+ ..
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~-----------~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPI-----------VIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcce-----------EEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 3456667777788888777777766655442 36778888888887776543110 00 00
Q ss_pred c--ccccC---------------CCCCcc--ceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHH
Q 007932 434 R--VQHIS---------------GPKQIV--PMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGI 494 (584)
Q Consensus 434 ~--~~~~~---------------~~~~~~--~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~ 494 (584)
. +...+ .+.+.. ...+..+++.-++.|+|.+...+....++.|.+|++.|+.+.|+.+...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 0 00000 001111 1234556678889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhh
Q 007932 495 GVGNFLNSFLVTLVDKV 511 (584)
Q Consensus 495 ~lg~~lg~~l~~~i~~~ 511 (584)
.+|..+|+.+.+.+...
T Consensus 218 ~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQI 234 (633)
T ss_pred HhhhHHHHHHHHHHHhc
Confidence 99999999998887643
No 244
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.63 E-value=0.00074 Score=74.20 Aligned_cols=152 Identities=9% Similarity=-0.060 Sum_probs=107.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh---hhhhHHHHHHHHHHHhhhHhHHHhhcccchhH-HHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTV---SSVRNVNNWSGVVWITPLLGAYIADTYIGRFW-TFT 99 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-~~~ 99 (584)
.+.+|.+...+.+.+...+.+|.+..+.|......++-|+. +.++....+.++..++.++.|.+..++ +|-| .++
T Consensus 306 f~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li 384 (599)
T PF06609_consen 306 FKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLI 384 (599)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHH
Confidence 34456777778888889999998888888777777776653 567888889999999999999999887 8755 445
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccc
Q 007932 100 LSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKV 179 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (584)
++.+++.++...++... + .+....+...++.|++.|...........-..|++ ..+
T Consensus 385 ~~~~~~ta~~Gama~~~----------------~--~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~------~ig 440 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVR----------------P--DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE------DIG 440 (599)
T ss_pred HHHHHHHHHHHHHHHcc----------------C--CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch------HHH
Confidence 66666665555554431 1 12223455566788888887766666665566665 478
Q ss_pred eeeeeehhHHhHhHHHHhhhh
Q 007932 180 SFFNWWMFSSFIGALCATLGL 200 (584)
Q Consensus 180 ~~~~~~~~~~~~g~~~g~~~~ 200 (584)
.+.++....-.+|+.+|..+-
T Consensus 441 ~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 441 TATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHH
Confidence 888887777778777775533
No 245
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.54 E-value=0.021 Score=60.70 Aligned_cols=193 Identities=11% Similarity=-0.087 Sum_probs=102.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
|..+.+...-++...+--++....+.|+.+.+.-+..-.+..-..-.+...++.+.-|.+.||. .|.+++..+.+..-+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 3455666666777777777777777888766543433333333444566667778889999998 999988777653333
Q ss_pred HH----HHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHH-HhcccccccccccccccCCCCChhhhcccceee
Q 007932 108 GM----ILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIA-IGAGGTKPNISTFGADQFDDFNPYERNLKVSFF 182 (584)
Q Consensus 108 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-i~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (584)
+. .++......+... .+ +......+++...+.| +..=+......+.=-|+...=..++...+.+..
T Consensus 81 sv~~s~~~~~~l~~~~~~~-------~~--~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~N 151 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSS-------SQ--SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMN 151 (432)
T ss_pred HHHHHHHHHHHHHhCCccc-------cc--cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHH
Confidence 22 2222221111100 00 0011122222222222 222111222222223333211111111355555
Q ss_pred eeehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 183 NWWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 183 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
+...=.-.+--.++|++.|.+....+......+.+...+++...-++.
T Consensus 152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555566788999999999888888877777766666666654443
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.53 E-value=0.00064 Score=74.70 Aligned_cols=187 Identities=15% Similarity=0.140 Sum_probs=104.8
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSL 103 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 103 (584)
+..+|.....+....+.+..-+....+....+-+..|.+... ............++..++.++.||+ |||+.++.+..
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 345566666666666655544433333333334455665433 4555566777778888889999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 104 IYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
.+.++.++++........... ............+..+ ......+..|..+.+..|.+|.+ .|+.+.+
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-v~~f~~g~g~v~w~~~sEifp~~------~r~~~~s 434 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPN------SSKGAGWLAIVFLCLF-IFSFAIGWGPVPWVIVSEIFPLR------LRSKGAS 434 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCC------cccchhHHHHHHHHHH-HHHHhcccccchhhhhhccCcHh------HHhhhHH
Confidence 999999888876432210000 0000011111222222 22223333466677889999988 5888877
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHH
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLV 225 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~ 225 (584)
+......+...+.......+.+..++...|.+.+....+...
T Consensus 435 ~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 435 LAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 765555554444333333333333334455544444444443
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.49 E-value=0.00031 Score=76.05 Aligned_cols=131 Identities=10% Similarity=0.037 Sum_probs=83.9
Q ss_pred chhhHHHHHhhccccchhhh-hhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeeh
Q 007932 372 FVTLSMLLSVPMYDRYFVPF-MRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIF 450 (584)
Q Consensus 372 ~~~l~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (584)
.......+..++.+++.||+ +||+ .+.+|.++++++.++.+... .+..
T Consensus 53 ~~~~~~~l~~ligG~LaDRilGrrr-----------~iliG~il~~lg~lll~~~~--------------------~~~~ 101 (493)
T PRK15462 53 AYCSLVYVTPILGGFLADKVLGNRM-----------AVMLGALLMAIGHVVLGASE--------------------IHPS 101 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcHH-----------HHHHHHHHHHHHHHHHHHhh--------------------cchh
Confidence 33344455555667777776 5552 36778887777765544220 0112
Q ss_pred hhHHHHHHHHHHHHHHhhhceeeeeccCCch--hHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCcc
Q 007932 451 WLLPQYVLLGVADVFNAIGLLEFFYDQSPED--MQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDC 528 (584)
Q Consensus 451 ~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~--~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~ 528 (584)
.+.....+..+|.++..+...+++.+.+|++ .|.++.+++....++|+.+++.+.+.+.+..
T Consensus 102 ~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~---------------- 165 (493)
T PRK15462 102 FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY---------------- 165 (493)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------
Confidence 2333444555677777777778888999875 7999999999999999999999998875311
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 007932 529 HLDYYYGFLMVISILNLGAFF 549 (584)
Q Consensus 529 ~~~~~f~~~~~~~~~~~l~~~ 549 (584)
++.+.|.+.++..+++++.++
T Consensus 166 Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 166 SWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHH
Confidence 334566666555555444443
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.23 E-value=0.047 Score=58.78 Aligned_cols=168 Identities=7% Similarity=-0.095 Sum_probs=101.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc-----hhhhhhHHHHHHHHHHHh-hhHhHHHhhcccchhHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHED-----TVSSVRNVNNWSGVVWIT-PLLGAYIADTYIGRFWTF 98 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~-----~~~~~~~~~~~~~~~~~~-~~~~G~laD~~~Grk~~~ 98 (584)
..+|+++...+..++..+.|+...+ +.+.+..+ .....++-....+.+.+. .++.+++++|+ +|++++
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf 77 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence 3446666667777777777665544 45666553 245556655555554544 78889999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-c-cCC--CCCCC-CcCCCCcc------hHHHHHHHHHHHHHhcccccc-ccccccccc
Q 007932 99 TLSSLIYVLGMILLTMAASLK-F-MKP--TCTNG-ICSKTSTS------QIAFFYSSLYIIAIGAGGTKP-NISTFGADQ 166 (584)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~-~~~~~~~~------~~~~~~~~~~~~gi~~g~~~~-~~~~~~~~~ 166 (584)
.+-...+....++.++....- . +.+ +|.+. ..+++.-. +.|...+.-+...+-.....+ ..+++..|.
T Consensus 78 ~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi 157 (472)
T TIGR00769 78 YTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 887777777666666552100 0 000 00000 00000000 122222222223333334444 678899999
Q ss_pred CCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhh
Q 007932 167 FDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQ 204 (584)
Q Consensus 167 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 204 (584)
+..+ +-.|.++....+.|+|..+++.+..++.
T Consensus 158 ~t~~------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 158 TTID------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 5899999999999999999998888876
No 249
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.22 E-value=0.004 Score=66.43 Aligned_cols=157 Identities=14% Similarity=0.099 Sum_probs=97.7
Q ss_pred cccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccc
Q 007932 367 ASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVP 446 (584)
Q Consensus 367 ~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (584)
++......++.++..|..+.+-.+..+- ++| ++.|.+++.++.++...++.. +
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~--k~P--------li~s~ii~~~g~llY~~l~~~-----------------~ 126 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSV--KKP--------LIVSFLIAIIGNLLYLALAYV-----------------P 126 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCc--ccC--------HHHHHHHHHHHHHHHHHHHhc-----------------c
Confidence 3455557778888888887775443321 223 788999999999888665321 2
Q ss_pred e-eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCC-
Q 007932 447 M-SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDN- 524 (584)
Q Consensus 447 ~-~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~- 524 (584)
. .-++++...++.|+|.+-.... -.|+.+..-.+.|.++++.......+|.++||.+.+.+....+ .|+....
T Consensus 127 ~~~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~----~G~~i~~~ 201 (488)
T KOG2325|consen 127 NGVKYLMLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE----KGFMILPG 201 (488)
T ss_pred cchHHHHHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC----CceEEcCc
Confidence 2 4567788888888886544333 4556565555667777776666667777777777666554332 2443222
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 007932 525 LNDCHLDYYYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 525 ~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
...+.|...=|+.+++.++..++..++.++.
T Consensus 202 ~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 202 LIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred ceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 3344455556677777777766666666554
No 250
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.21 E-value=0.00039 Score=72.36 Aligned_cols=179 Identities=15% Similarity=0.138 Sum_probs=120.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhh----HHHH-HHHHHHH----hhhHhHHHhhcccchhHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVR----NVNN-WSGVVWI----TPLLGAYIADTYIGRFWTF 98 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~----~~~~-~~~~~~~----~~~~~G~laD~~~Grk~~~ 98 (584)
+.+...+..++...+++|+...+...-++ .+|+.+..... -+.. ..+.... +-.++..+.|++ |||++-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 56667778888888999987776655544 44554443332 1111 1122222 444557779998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHH-HHHhcccccccccccccccCCCCChhhhcc
Q 007932 99 TLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYI-IAIGAGGTKPNISTFGADQFDDFNPYERNL 177 (584)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (584)
+.+.+++.+..+.++..-+- ..+...+++.-.+ +-++.-+.....-.+-+|.||.+ .
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~----------------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar------v 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQ----------------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR------V 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCccc----------------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH------H
Confidence 99999888877766654220 0111222222222 33444455566667789999998 5
Q ss_pred cceeeeeehhHHhHhHHHHhhhhhhhhc-----ccchhHHHHHHHHHHHHHHHHHHHh
Q 007932 178 KVSFFNWWMFSSFIGALCATLGLVYIQE-----NLGWGLGYGIPTAGLLFSLVIFYIG 230 (584)
Q Consensus 178 r~~~~~~~~~~~~~g~~~g~~~~~~l~~-----~~~~~~~f~~~~~~~~~~~~~~~~~ 230 (584)
|+...++.....-.|+++|...-.++.+ ..+.+..|++.+...++..++-++.
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 9999999999999999999999999988 6788999998888777776654443
No 251
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.07 E-value=0.0052 Score=65.39 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=83.2
Q ss_pred ccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccce
Q 007932 368 SLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPM 447 (584)
Q Consensus 368 ~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (584)
.+......+..+.....+.+.|+++-| +.+.++++..++..++.++. .
T Consensus 66 ~I~s~F~ysYal~qIp~GlLaDrlG~K-----------~vL~l~~l~Wsl~t~L~~fa---------------------~ 113 (511)
T TIGR00806 66 EIIPVLPYSHLAVLVPVFLLTDYLRYK-----------PVLVLQALSFVCVWLLLLLG---------------------T 113 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHH---------------------H
Confidence 333444445555555555555554544 34777777777777777776 2
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
+...+.+.-++.|++++... ....++++.+|++.|++++|+.+....+|.++++.+.+.+
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678888899999999999 9999999999999999999999999999999999999884
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=96.95 E-value=0.0046 Score=68.35 Aligned_cols=126 Identities=10% Similarity=0.044 Sum_probs=83.5
Q ss_pred ccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHH
Q 007932 383 MYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVA 462 (584)
Q Consensus 383 ~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~ 462 (584)
..+++.|++++| ..+.++.++.+++.++.+..... ....+.+.+.+..++.|+|
T Consensus 80 p~G~L~Dr~G~R-----------~vllig~ll~~iG~ll~ala~~~---------------~i~~s~~~l~l~r~l~G~G 133 (591)
T PTZ00207 80 PYSFIYDYLGPR-----------PIFVLSMTVFCLGTLLFALTFQE---------------VIEGSVVRLSVYNGLMTLG 133 (591)
T ss_pred HHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHhcc---------------cccCcHHHHHHHHHHHHHH
Confidence 345555555555 34788888888888877765110 0012455566777788999
Q ss_pred HHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHH
Q 007932 463 DVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISI 542 (584)
Q Consensus 463 ~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~ 542 (584)
.+..++.....+.+.+| +.||.+.|+......+|+.+.+.+...+.. .+...+|++++++.+
T Consensus 134 ~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----------------~~~~~~fl~l~vl~~ 195 (591)
T PTZ00207 134 CMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----------------DNTSAYFFFLMSFAL 195 (591)
T ss_pred HHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HhHHHHHHHHHHHHH
Confidence 88888877777778787 779999999999999999764444433321 122356777777777
Q ss_pred HHHHHHHhhh
Q 007932 543 LNLGAFFWAS 552 (584)
Q Consensus 543 ~~~l~~~~~~ 552 (584)
+..++.+.+.
T Consensus 196 vv~ll~~~~v 205 (591)
T PTZ00207 196 VVGILAIVFM 205 (591)
T ss_pred HHHHHHHhhe
Confidence 6655555443
No 253
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.90 E-value=0.015 Score=60.77 Aligned_cols=185 Identities=15% Similarity=0.063 Sum_probs=114.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhH-HHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFW-TFTLSSLIYV 106 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-~~~~~~~~~~ 106 (584)
+++.++.++.......+|+..+.+..-+ ..-|.+...+|++.....++..++....|.++||. ...| +.++......
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~ 343 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFAL 343 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHH
Confidence 4456666666666666666655554333 24577778889999999999999999999999997 5443 4444444444
Q ss_pred HHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeeh
Q 007932 107 LGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWM 186 (584)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (584)
++. ++....+.. ....+.++..-.+.|.......|+..-+..|..-|.. =+.-.|..+
T Consensus 344 v~~-~~l~~~t~~---------------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsGll~ 401 (480)
T KOG2563|consen 344 VGT-LMLLTCTLF---------------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSGLLN 401 (480)
T ss_pred HHH-HHHHHhhcc---------------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------CcccceeEE
Confidence 442 222111100 1223345555667788888888888888888775543 255556666
Q ss_pred hHHhHhHHHHhhhhhhhhcccc----hhHHHHHHHHHHHHHHHHHHHhCCceee
Q 007932 187 FSSFIGALCATLGLVYIQENLG----WGLGYGIPTAGLLFSLVIFYIGSPIYRH 236 (584)
Q Consensus 187 ~~~~~g~~~g~~~~~~l~~~~~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 236 (584)
...++-+.+-..+-+...+.++ |...-+.......+..++..+.++++++
T Consensus 402 ~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 402 LSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred eehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 6667766666677777776665 4433344444455555555666665544
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.85 E-value=0.011 Score=47.33 Aligned_cols=73 Identities=8% Similarity=-0.018 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 007932 42 MAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAA 116 (584)
Q Consensus 42 ~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~ 116 (584)
++.+.+++.+| .+.++.++|..+.+++-+...+++.++.+...++.++. .+++.+..+++...+..+.+++..
T Consensus 6 igRFayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555666555 56789999999999999999999999999999999997 889999999999999988888864
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.83 E-value=0.013 Score=53.22 Aligned_cols=103 Identities=15% Similarity=0.095 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHH
Q 007932 69 NVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYII 148 (584)
Q Consensus 69 ~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (584)
-.++......+.+++.+.+.+++ |.|+.++++.+.+.+-...... ++.+.++.+-.+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~---------------------~~~~~l~~~s~l~ 99 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY---------------------PNSYTLYPASALL 99 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh---------------------hhHHHHHHHHHHH
Confidence 34455666777888888899998 9999999998877754433322 4567789999999
Q ss_pred HHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhh
Q 007932 149 AIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLG 199 (584)
Q Consensus 149 gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 199 (584)
|++.+..+.....++.+..+++ .+++..+++-...+.+.+.|.++
T Consensus 100 G~~~a~lW~aqg~ylt~~s~~~------~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 100 GFGAALLWTAQGTYLTSYSTEE------TIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hhhhHHhhHhhhHHHHHcCCHH------HHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887766 46766666555555555555443
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.80 E-value=0.0064 Score=66.94 Aligned_cols=129 Identities=14% Similarity=0.097 Sum_probs=97.2
Q ss_pred ccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccce
Q 007932 368 SLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPM 447 (584)
Q Consensus 368 ~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (584)
..+.+..++.+++..+.+.+.|+++||. .+..++++..++-+..++. .
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~-----------~~~~~~~~~~i~~~~~a~a---------------------~ 169 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKP-----------VLLVSLLLFIIFGILTAFA---------------------P 169 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHH-----------HHHHHHHHHHHHHHHHHHh---------------------C
Confidence 4455666777777777777777767773 3666777776666555555 4
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCc
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLND 527 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~ 527 (584)
+++.+++.-++.|++..........++.|..+++.|+.+..+ ......++.+++....++.. +|
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W------- 233 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW------- 233 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH-------
Confidence 677788888999999999999999999999999999999999 77778888888888877652 33
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 007932 528 CHLDYYYGFLMVISILNLGA 547 (584)
Q Consensus 528 ~~~~~~f~~~~~~~~~~~l~ 547 (584)
.+.+++..+..++..+.
T Consensus 234 ---r~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 234 ---RWLFWIISIPSGLFLLL 250 (521)
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 45566666666665444
No 257
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.50 E-value=0.23 Score=51.07 Aligned_cols=159 Identities=11% Similarity=0.062 Sum_probs=86.1
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhh-----cccchhHH
Q 007932 23 KTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIAD-----TYIGRFWT 97 (584)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD-----~~~Grk~~ 97 (584)
.+...+.+..+++......+ -++.....|..+ +..|.|-++.+.....+ -=+-.-+++..+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGi-P~GL~~~iP~lL-~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGI-PLGLIGAIPLLL-QAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCC-chhHhhhhHHHh-cCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 34555666666666655554 466666555444 46677776665333222 12234567788888 88 99997
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcc
Q 007932 98 FTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNL 177 (584)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (584)
-++-+ -+.+|.++..++...+. -- +.|+.+ ++........++.-+.++.-.-+.-...-....++ .
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~---~~---g~ng~~-p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e------~ 166 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDR---GL---GGNGGL-PNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRE------N 166 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCc---cc---ccCCCC-cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHh------h
Confidence 65543 22334444444422221 00 112222 33333333334444454444444444444555555 3
Q ss_pred cceeeeeehhHHhHhHHHHhhhh
Q 007932 178 KVSFFNWWMFSSFIGALCATLGL 200 (584)
Q Consensus 178 r~~~~~~~~~~~~~g~~~g~~~~ 200 (584)
.+-+...+..+.+.|.+++..+-
T Consensus 167 lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred cCchhHHHHHHHhhhHHhhccee
Confidence 78888888888899988885543
No 258
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.47 E-value=0.012 Score=60.14 Aligned_cols=135 Identities=12% Similarity=0.074 Sum_probs=103.2
Q ss_pred HHHHHHHHHHh-hhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccc-hhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007932 45 YGIQSNLVNYL-TSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIG-RFWTFTLSSLIYVLGMILLTMAASLKFMK 122 (584)
Q Consensus 45 ~~~~~~~~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-rk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (584)
|....+...++ ...+|+++.+.|-+.+...+.+.+.+..-....||..| -+-.+..++..+.-..+++..+
T Consensus 277 ~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~------- 349 (451)
T KOG2615|consen 277 FSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA------- 349 (451)
T ss_pred HHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------
Confidence 33333344444 46799999999999999999999999998999999833 3444444444444444444544
Q ss_pred CCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhh
Q 007932 123 PTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVY 202 (584)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 202 (584)
...-.++.+..+-.+..+...++...++....|.+ +||.+.|+......++-++||.++|.
T Consensus 350 -------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~------qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 350 -------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQS------QRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred -------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcc------cchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 23455788888888888888899999999999988 69999999999999999999999988
Q ss_pred hhc
Q 007932 203 IQE 205 (584)
Q Consensus 203 l~~ 205 (584)
+..
T Consensus 411 i~~ 413 (451)
T KOG2615|consen 411 IFS 413 (451)
T ss_pred eEE
Confidence 765
No 259
>PRK03612 spermidine synthase; Provisional
Probab=96.41 E-value=0.099 Score=57.36 Aligned_cols=169 Identities=14% Similarity=0.048 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHH-HHHHHH-HHHHHH
Q 007932 35 GYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTL-SSLIYV-LGMILL 112 (584)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~-~~~~~~-~~~~~~ 112 (584)
...+...++..++-....-.++..+|-+....+.+++.+..+..+++.++|+++++. -|+...+- +..+.. ++..++
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 333444454444555555666777899999999999999999999999999987554 33322211 111111 111111
Q ss_pred HHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 113 TMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
...... + ......++...++.++..|+..|....+..+....+ -++..+..+....+|
T Consensus 100 ~~~~~~-~--------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ntlG 157 (521)
T PRK03612 100 YAAFAF-Q--------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAADYLG 157 (521)
T ss_pred HHHHHH-H--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhHHhHH
Confidence 111100 0 011122334445567888888787776665433211 355567777788888
Q ss_pred HHHHhhhhhhhhc-ccchhHHHHHHHHH-HHHHHHH
Q 007932 193 ALCATLGLVYIQE-NLGWGLGYGIPTAG-LLFSLVI 226 (584)
Q Consensus 193 ~~~g~~~~~~l~~-~~~~~~~f~~~~~~-~~~~~~~ 226 (584)
+++|.++.+++.- ..|-....++.+.+ .++++++
T Consensus 158 a~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 158 ALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888887654 56644333333333 3444333
No 260
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.37 E-value=0.00055 Score=75.16 Aligned_cols=149 Identities=11% Similarity=0.082 Sum_probs=2.9
Q ss_pred ccccCCCCCCcccCccccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHH----H
Q 007932 352 TTLNRSLSPSFRIPAASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVE----V 427 (584)
Q Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~----~ 427 (584)
...++.++ --+...+.+....=++.++...+..++ ++|. ++.+.+..|.++++++.+++.+-+ .
T Consensus 27 ttiErRF~-l~S~~~G~i~s~~di~~~~~~~~vsy~----g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 27 TTIERRFG-LSSSQSGLISSSYDIGSLVVVLFVSYF----GGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHHH----hhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 34455432 112344455555666666666666655 4442 334557888888888887765421 0
Q ss_pred hhhhhc--------cccccC---------------CCC--CccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchh
Q 007932 428 RRMHVI--------RVQHIS---------------GPK--QIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDM 482 (584)
Q Consensus 428 ~~~~~~--------~~~~~~---------------~~~--~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 482 (584)
+..... .+...+ .++ .........+++..++.|+|.....+...+|+.|-++++.
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 000000 000111 001 1122345667778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhhhh
Q 007932 483 QSLGTTFFTSGIGVGNFLNSFLVTLVDKVT 512 (584)
Q Consensus 483 rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~ 512 (584)
-+.+.|+.+....+|..+|..+.+...+.+
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~y 204 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIY 204 (539)
T ss_dssp ------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhce
Confidence 999999999999999999988887765433
No 261
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.26 E-value=0.011 Score=63.68 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=106.8
Q ss_pred HHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhH-HHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCC
Q 007932 50 NLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGA-YIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNG 128 (584)
Q Consensus 50 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G-~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (584)
.++.|+...++++..+.+...+..++...++..+.. .+.-.+ |-|+++.+|++...+...+.+++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~~~~~~~~~~af~------------- 328 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLLSEFLQLLLFAFA------------- 328 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHHHHHHHHHHHHHh-------------
Confidence 345678889999999999999999999999999988 566666 99999999999999999999998
Q ss_pred CcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 129 ICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
++.|+++....+.++ .+...|...++++.+.+++ ++++++++......+...++|.+-+.+..
T Consensus 329 -------~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~------e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 329 -------TETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPE------EQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred -------ccchhhhHHHHHHHh-hcchhHHHHhHHHhhcccc------cccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 456667777665554 4666788999999999888 49999999999999999999887777643
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.25 E-value=0.017 Score=64.89 Aligned_cols=65 Identities=29% Similarity=0.625 Sum_probs=59.8
Q ss_pred CccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 007932 443 QIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTL 507 (584)
Q Consensus 443 ~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~ 507 (584)
.+++++.+|.++.+++.+.||.+...+..++.++++|+++|+...+++.+...+|+.+...+...
T Consensus 559 ~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~ 623 (654)
T TIGR00926 559 SVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEF 623 (654)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46779999999999999999999999999999999999999999999999999999998777533
No 263
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.12 E-value=0.029 Score=62.69 Aligned_cols=106 Identities=11% Similarity=0.000 Sum_probs=74.3
Q ss_pred ehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCcc
Q 007932 449 IFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDC 528 (584)
Q Consensus 449 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~ 528 (584)
+..++...++.|+|....++...+|+.|-+-++.-+.+.|+.+++..+|-++|..+.......+-+.+...-.. +.++.
T Consensus 237 ~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~i-t~~DP 315 (735)
T KOG3626|consen 237 FLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGI-TPTDP 315 (735)
T ss_pred HHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCC-CCCCc
Confidence 34566677888999999999999999999999999999999999999999999999888776554331111111 11122
Q ss_pred chhH----HHHHHHHHHHHHHHHHHhhhhcc
Q 007932 529 HLDY----YYGFLMVISILNLGAFFWASSRY 555 (584)
Q Consensus 529 ~~~~----~f~~~~~~~~~~~l~~~~~~~~~ 555 (584)
.+.. -|.+.+.+.++..+.++++-++.
T Consensus 316 rWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 316 RWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 2222 25566777777766666554433
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.67 E-value=0.007 Score=64.15 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCch--hH
Q 007932 406 QRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPED--MQ 483 (584)
Q Consensus 406 ~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~--~r 483 (584)
+.+..|.++++++.++.+... ..+...+.+.+++.++|.++.-+....++.+++|++ .|
T Consensus 93 ~tI~lGail~~iGh~~L~~~~-------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dprr 153 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISS-------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRR 153 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccc-------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCccc
Confidence 458889999999998877541 023446777888888999999999999999998854 46
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 007932 484 SLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYVY 557 (584)
Q Consensus 484 g~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~ 557 (584)
-.+.+++....++|+++++.+.+++.... ++...|...++-+.++++.++...++.+.
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINY----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 66777888888899999999998876322 34556777777777776666665444443
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.91 E-value=0.077 Score=55.65 Aligned_cols=124 Identities=16% Similarity=0.163 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCch---h
Q 007932 406 QRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPED---M 482 (584)
Q Consensus 406 ~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~---~ 482 (584)
+.+.+|.++..++.+++......... ....+...+...+.+.++|.++.-|+...+..|+++++ .
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~ 69 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR 69 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh
Confidence 34778888888888875554211000 11234566778888999999999999999999998865 5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 007932 483 QSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSRYVY 557 (584)
Q Consensus 483 rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~ 557 (584)
|..+...+....++|..++..+.+++.+. -++...|.+.++..+++.+.++.-.++++.
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~~----------------~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~ 128 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQN----------------YGWFLGFGIPAIGMLLALIVFLSGRKRYRK 128 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHC----------------S-HHHHHHHHHHHHHHHHHHHHCCCCTT--
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhccc----------------cchhhhhhHHHHHHHHHHHHHHhCCcCCcC
Confidence 66667777888889999988887777521 244556777777777776666654444433
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.77 E-value=0.081 Score=51.99 Aligned_cols=91 Identities=11% Similarity=0.091 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhH
Q 007932 404 MLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQ 483 (584)
Q Consensus 404 ~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~r 483 (584)
+...+.+|.+...++..........+ ..+.+.|.+....++.+.+....+........+.+| +.|
T Consensus 65 p~~~l~iG~~~~~~GY~~~~l~~~~~--------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~R 129 (250)
T PF06813_consen 65 PWVVLLIGAVLGFVGYGLLWLAVSGR--------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSR 129 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCc--------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-ccc
Confidence 33457888888888887766553211 111344445555556666666655555555557888 579
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhh
Q 007932 484 SLGTTFFTSGIGVGNFLNSFLVTLVD 509 (584)
Q Consensus 484 g~~~gi~~~~~~lg~~lg~~l~~~i~ 509 (584)
|++.|+.....++++.+-..+...+.
T Consensus 130 G~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 130 GTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred CceehhhhHHHHhHHHHHHHHHHHHc
Confidence 99999999998888888777665543
No 267
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.43 E-value=0.35 Score=51.56 Aligned_cols=137 Identities=9% Similarity=-0.085 Sum_probs=104.5
Q ss_pred HHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 007932 47 IQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCT 126 (584)
Q Consensus 47 ~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (584)
.-..+..|+..+ |+++...|..-+...+....+.....++-+|+ |..|.=+++.....++..++..+...+.
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~------ 348 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPG------ 348 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCC------
Confidence 345566788767 99999999999999999999999999999999 9999999998888777766665532221
Q ss_pred CCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhh
Q 007932 127 NGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLV 201 (584)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 201 (584)
++....+...++.+..+.=+|.=++.-+...++.|..|++ +|+...+..+...++.-.+-..++-
T Consensus 349 ----~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~------~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 349 ----SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES------ERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH------HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001234455555555555777677788899999999987 5999999999999998887755443
No 268
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.74 E-value=2.1 Score=42.96 Aligned_cols=49 Identities=12% Similarity=0.236 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHH
Q 007932 457 VLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLV 505 (584)
Q Consensus 457 ~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~ 505 (584)
++-|+-.+......+--+.++.+++.|..+++.....-.+|-.+...+.
T Consensus 350 ~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 350 LFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 3345544444555555566778889999999987776666666666554
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.41 E-value=4.2 Score=39.90 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=39.4
Q ss_pred ccceeeeeehhHHhHhHHHH--hhhhh-hhh--cccchhHHHHHHHHHHHHHHHHHHHhCC
Q 007932 177 LKVSFFNWWMFSSFIGALCA--TLGLV-YIQ--ENLGWGLGYGIPTAGLLFSLVIFYIGSP 232 (584)
Q Consensus 177 ~r~~~~~~~~~~~~~g~~~g--~~~~~-~l~--~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 232 (584)
+|+....+..++.|+|+++. |.+.+ -.. ....|++.+.+.+++.++-++++.+.-+
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk 63 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGK 63 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 68899999999999999987 33332 111 1235999988888777777766666544
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.23 E-value=0.65 Score=49.70 Aligned_cols=143 Identities=15% Similarity=0.073 Sum_probs=90.0
Q ss_pred HHHHHHHHh--hhhcCCchhhhhhH-HHHHHHHHHHhhhHhHHHhhcc--cchhHHHHHHHHHHHHHHHHHHHhhhccc-
Q 007932 47 IQSNLVNYL--TSQLHEDTVSSVRN-VNNWSGVVWITPLLGAYIADTY--IGRFWTFTLSSLIYVLGMILLTMAASLKF- 120 (584)
Q Consensus 47 ~~~~~~~yl--~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~G~laD~~--~Grk~~~~~~~~~~~~~~~~~~~~~~~~~- 120 (584)
+....|..+ +..++.+....-.+ ......+..++.++.+.+.+|. +||++++.++..+..++.++.-+.. |.
T Consensus 259 ~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~d 336 (461)
T KOG3098|consen 259 WISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PND 336 (461)
T ss_pred HHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--ccc
Confidence 344444333 33455444432222 2223444555566667776552 3899999999998888876666542 22
Q ss_pred --cCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhh
Q 007932 121 --MKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATL 198 (584)
Q Consensus 121 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 198 (584)
+.+|- +-.....++.....+.-++.|++........+.++++.+|++ |..+++++.+...++..++..
T Consensus 337 ap~~~t~---~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 337 APLRPTD---SPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred CCCCCCc---ccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHhh
Confidence 12211 111122345556677778899999999999999999999644 889999988888888877644
Q ss_pred hhh
Q 007932 199 GLV 201 (584)
Q Consensus 199 ~~~ 201 (584)
...
T Consensus 407 ~~~ 409 (461)
T KOG3098|consen 407 FSP 409 (461)
T ss_pred hhh
Confidence 443
No 271
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.97 E-value=16 Score=39.53 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 451 WLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 451 ~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
.++...++..+.....+....++-.+++.|..-|++|.+.|+..++|+.--..+.-...+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 345566777778888899999999999999999999999999999998766655544443
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.90 E-value=15 Score=39.32 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=50.8
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTL 507 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~ 507 (584)
+-++.++..+++|+..+........+..+.++++.|..+..+..+.-.+|-.+|..+.-.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778899999999999999999999999999999999998888888888777533
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.69 E-value=0.53 Score=49.68 Aligned_cols=182 Identities=12% Similarity=-0.018 Sum_probs=100.4
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCch----------------hhhhhHHHHHHHHHHHhhhHh
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQ-LHEDT----------------VSSVRNVNNWSGVVWITPLLG 84 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~----------------~~~~~~~~~~~~~~~~~~~~~ 84 (584)
..+.+++..+.++.+.++.+++.+....+.+-++-++ ++=|+ ..-.|-..++++...+.+...
T Consensus 273 ~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~ 352 (498)
T KOG0637|consen 273 ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLV 352 (498)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999999888877777666432 22221 111244556777888899999
Q ss_pred HHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCC-CcCCCCcchHHHHHHHHHHHHHhcccccccccccc
Q 007932 85 AYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNG-ICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFG 163 (584)
Q Consensus 85 G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~ 163 (584)
-++.||+ |-|+.++.+...+.++..+.+...+......++.+. ...++...-.+....-.-..++-......+..+..
T Consensus 353 ~~l~~~~-g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~ 431 (498)
T KOG0637|consen 353 EKLSRKF-GTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALA 431 (498)
T ss_pred HHHHHhc-CcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccc
Confidence 9999999 966666666655555555555443222211111111 11111111111121112222332322222222222
Q ss_pred cccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccc
Q 007932 164 ADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLG 208 (584)
Q Consensus 164 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 208 (584)
+...... +..+|.-.++.+....+-.++.....|.+.+..|
T Consensus 432 s~~~~~s----g~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 432 SIEIGNS----GLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred cccccCc----cCCCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 2111111 1145777778888888888887777777766655
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.32 E-value=0.59 Score=49.11 Aligned_cols=63 Identities=13% Similarity=0.006 Sum_probs=53.4
Q ss_pred chHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhh
Q 007932 136 SQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQ 204 (584)
Q Consensus 136 ~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 204 (584)
++.+..++.-+..|+..|+.+.+....+.|..|++ +|..+++....+-.+|..++..++-++.
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~------~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE------DREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45777777888889999999999999999988877 5999999999999999998877776553
No 275
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=90.71 E-value=2 Score=43.48 Aligned_cols=120 Identities=17% Similarity=0.198 Sum_probs=74.9
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 22 SKTGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
.++..-|+++.+-...++...++-+... +......++| +.++ +.........+++.+.+..++ |-|+++.++
T Consensus 23 ~~~~~~knv~i~s~~fl~~f~a~~gl~n-lq~~vn~~lg----~~sl--~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~la 94 (390)
T KOG3097|consen 23 KRLGILKNVLILSIAFLLTFTAYLGLQN-LQTSVNYDLG----TVSL--GALYLSLIDSSMFMPLLIRFL-GTKWTMVLA 94 (390)
T ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHH-HHHHHhcCcc----cchh--hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 3445557778877777777766665533 3333222222 2221 223344445566666788887 999999887
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCC
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDF 170 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~ 170 (584)
...+.... ++++ .+....++.+-...|++.+..+..--+++++.-...
T Consensus 95 v~~Y~lyi-----A~Nl----------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 95 VFPYALYI-----AANL----------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred HHHHHHHH-----Hhhc----------------chhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 65544332 2221 245666788888999999999999888888876543
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.06 E-value=1.5 Score=39.66 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=52.6
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
+.+.+++.-++.|++.....+..-.++.+...++.+++..+++....+.+.++|..+.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999999999888998999999999999999999998888887776444
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.32 E-value=0.38 Score=48.90 Aligned_cols=149 Identities=12% Similarity=0.087 Sum_probs=81.4
Q ss_pred HHHHHHhh-hhcCCchhhhh---hHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 007932 49 SNLVNYLT-SQLHEDTVSSV---RNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPT 124 (584)
Q Consensus 49 ~~~~~yl~-~~l~~~~~~~~---~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (584)
+++.+|+. .+.|++..+.. .-+..|+....+.+.+ .+.|.. -=|+++++-.+.......++.+.
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvF--lLTD~l-rYKPvivlq~ls~v~~w~~lv~g--------- 92 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVF--LLTDYL-RYKPVVVLQALSGVPVWIMLVFG--------- 92 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHH--HHhhhh-hcceeeeeeccchhHHHHHHHhc---------
Confidence 45556665 45667666543 1233344444444444 488987 44555555555555555566655
Q ss_pred CCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhh
Q 007932 125 CTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQ 204 (584)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 204 (584)
++.+.+-+.-++.|...+. .-+-++++=+..+++ .+.++.+......-.|...|...+-.+.
T Consensus 93 -----------~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~------~Yqrvt~y~RaA~L~g~~~g~vlaQlLv 154 (433)
T KOG3810|consen 93 -----------PSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPE------MYKRVTGYCRAAFLVGKFVGSVLAQLLV 154 (433)
T ss_pred -----------CCchheeeehhhcChHHHH-HHhhhheeeeecCHH------HHHHHHHHhHHHHHHHhHHHhHHHHHHh
Confidence 3344444444455544333 233455555666665 4777788888787778877766665554
Q ss_pred cc--cchhHHHHHHHHHHHHHHHHH
Q 007932 205 EN--LGWGLGYGIPTAGLLFSLVIF 227 (584)
Q Consensus 205 ~~--~~~~~~f~~~~~~~~~~~~~~ 227 (584)
.. .++...-.+......++.+..
T Consensus 155 s~~~~sy~~LN~ISL~~~~ia~~~A 179 (433)
T KOG3810|consen 155 SLETLSYTTLNYISLAEVTIAVLLA 179 (433)
T ss_pred hhcccchhhhchhhHHHHHHHHHHH
Confidence 32 334444445554444444443
No 278
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.27 E-value=32 Score=36.25 Aligned_cols=58 Identities=17% Similarity=0.154 Sum_probs=49.5
Q ss_pred eehhhHHHHHHHHHHHHHHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHH
Q 007932 448 SIFWLLPQYVLLGVADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLV 505 (584)
Q Consensus 448 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~ 505 (584)
+-+|.+....++|+..+-.......++.+.+|++++..+..+.......|-+.|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4567788888999999999999999999999999999998888888777777776664
No 279
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=88.93 E-value=2.8 Score=44.97 Aligned_cols=113 Identities=12% Similarity=0.108 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccceeehhhHHHHHHHHHHHHHHhhhceeeeeccC---CchhHH
Q 007932 408 LGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVPMSIFWLLPQYVLLGVADVFNAIGLLEFFYDQS---PEDMQS 484 (584)
Q Consensus 408 i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~---P~~~rg 484 (584)
+.++.++.+++...++..... ..+.......+++..+|..+.....-+.+.|.. |.+ ||
T Consensus 62 ~~i~~~~~~~~~~~~~~~~~~-----------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g 123 (433)
T PF03092_consen 62 MIIGWLLGAVSALVLALLPAS-----------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RG 123 (433)
T ss_pred HHHHHHHHHHHHHHHHhcccc-----------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hH
Confidence 566666665555555544210 122334445556677788877777777776664 444 88
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCccchhHHHHHHHHHHHHHHHHHHhhhhc
Q 007932 485 LGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLNDCHLDYYYGFLMVISILNLGAFFWASSR 554 (584)
Q Consensus 485 ~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~ 554 (584)
..++.......+|+.++..+.+...+.. +....|.+.+.+..+..+..+++.++
T Consensus 124 ~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 124 DLQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 8888888889999999988876654211 22233566666555555545555554
No 280
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.34 E-value=1.6 Score=42.94 Aligned_cols=176 Identities=11% Similarity=0.013 Sum_probs=98.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchh--HHHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRF--WTFTLSSLIY 105 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk--~~~~~~~~~~ 105 (584)
|...+-.+-..+|...+-.+..|.|.--.++ ...--|.+.+.+.....+++-+..++..|- ..| ..+.+..+..
T Consensus 249 ki~LLG~iqsLFE~smytFVFLWTPaLspn~---e~iPhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs 324 (454)
T KOG4332|consen 249 KIALLGAIQSLFEGSMYTFVFLWTPALSPND---EEIPHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVS 324 (454)
T ss_pred HHHHHHHHHHHHhhhhheeeeeecccCCCCc---ccCCchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHH
Confidence 4445555667777766555555544221111 112235666666666666655555554443 111 2333333332
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeee
Q 007932 106 VLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWW 185 (584)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (584)
.+. +++.+.++. .+|+..++..-+.+.++.-...|..+|.+.-+=.+..|++ .|+..++++
T Consensus 325 ~a~-l~Lpilt~~------------vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEe------arstimNfF 385 (454)
T KOG4332|consen 325 IAA-LLLPILTSS------------VSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEE------ARSTIMNFF 385 (454)
T ss_pred HHH-HHHHHHHhc------------cCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHH------HHhhhhhhe
Confidence 222 233332211 1122233444566777788889999999999999999988 499999999
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
..-.|+-..++-...-.=....+-|.+|.++.+...++.+.
T Consensus 386 RvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 386 RVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred echhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 98888877765322111112244567787777665555443
No 281
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.63 E-value=45 Score=35.99 Aligned_cols=168 Identities=8% Similarity=-0.102 Sum_probs=96.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc---hhhhhhHHHHHHH-HHHHhhhHhHHHhhcccchhHHHH
Q 007932 24 TGKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHED---TVSSVRNVNNWSG-VVWITPLLGAYIADTYIGRFWTFT 99 (584)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~---~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~ 99 (584)
+..++...-+.+..++..+.++..-. +.+.+.++ +.....+-...-. ++.+..++.+++.+++ -|.+++.
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 34556666666666666555443322 35555544 3334444444444 5667788889999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccc-cCCCCCCC------CcCCCCc-------chHHHHHHHHHHHHHhcccccc-ccccccc
Q 007932 100 LSSLIYVLGMILLTMAASLKF-MKPTCTNG------ICSKTST-------SQIAFFYSSLYIIAIGAGGTKP-NISTFGA 164 (584)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~-------~~~~~~~~~~~~~gi~~g~~~~-~~~~~~~ 164 (584)
+.+..+....+++++...+.. ..|. ++ ....++. -+.|...+.-+..-+=.....+ ..+....
T Consensus 97 ~~~~~F~~fF~LFa~Vi~P~~~~~hp--~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN 174 (509)
T COG3202 97 IILGFFLGFFALFAFVIYPYKDILHP--DPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC--CHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888887643110 0000 00 0000100 0112111111111111111111 3456677
Q ss_pred ccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhc
Q 007932 165 DQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQE 205 (584)
Q Consensus 165 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 205 (584)
|.+..+ +-.|+++.++...|++..++..+..++.+
T Consensus 175 eitt~~------eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 175 EITTIE------EAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HhhhHH------HhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888777 47999999999999999999888888865
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=85.31 E-value=22 Score=38.55 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHh-hhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 454 PQYVLLGVADVFNA-IGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 454 ~~~~l~g~~~~~~~-~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
..|+...+-...+. -.-|.++.|....++..+..++....+++|..+++.+...+.+
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444333443 3778899999999999999999999999999999988877653
No 283
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=82.74 E-value=30 Score=35.78 Aligned_cols=92 Identities=14% Similarity=-0.012 Sum_probs=52.8
Q ss_pred cccccchhhHHHHHhhccccchhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCCccc
Q 007932 367 ASLGSFVTLSMLLSVPMYDRYFVPFMRRRTGNPRGITMLQRLGVGFVIQVMAIAIAYAVEVRRMHVIRVQHISGPKQIVP 446 (584)
Q Consensus 367 ~~l~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~ig~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (584)
+.+........++.+++.+.+.|+++||+ ...+..++.+++.+. + ..
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----------~cl~~cily~~scl~----k------------------~~ 118 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK-----------ACLLFCILYSLSCLT----K------------------HS 118 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH-----------HHHHHHHHHHHHHHH----H------------------hc
Confidence 34445556677888888888888877774 123333333333321 1 12
Q ss_pred eeehhhHHHHHHHHHHHHHHhhhceeee-----eccCCchhHHHHHHHHH
Q 007932 447 MSIFWLLPQYVLLGVADVFNAIGLLEFF-----YDQSPEDMQSLGTTFFT 491 (584)
Q Consensus 447 ~~~~~li~~~~l~g~~~~~~~~~~~~~~-----~~~~P~~~rg~~~gi~~ 491 (584)
.+...++..=++.|++..+.+..--++. .+-.|++..+...+...
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~t 168 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLAT 168 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3456677777888888887766533322 24466665555544433
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=82.74 E-value=1.9 Score=46.17 Aligned_cols=155 Identities=11% Similarity=0.004 Sum_probs=83.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchh-hhhhHHHHHHHHHHHhhhHhHHHhhcccchh-HHHHHHHHH
Q 007932 28 KACAFLVGYEAFERMAFYGIQSNLVNYLTSQ-LHEDTV-SSVRNVNNWSGVVWITPLLGAYIADTYIGRF-WTFTLSSLI 104 (584)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk-~~~~~~~~~ 104 (584)
|++|...+..++..+....+.+......+.. .+.++. -.-.+...|.++-.++..+..+.- .- ++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~p-~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-WP-DEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-ee-CCCccchHHHHHH
Confidence 5666666655555544443333322222211 112222 334556666777777776554431 11 222 133333333
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCcCCC-CcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeee
Q 007932 105 YVLGMILLTMAASLKFMKPTCTNGICSKT-STSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFN 183 (584)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (584)
-.+...+..+.+.-+. ...+ --++.+..++.-++.|+..|...+....+..+..+++ +|..+..
T Consensus 347 R~iFIPlf~lcn~~~~---------~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~------e~e~aG~ 411 (437)
T TIGR00939 347 RVLFIPLFLLCNYPQR---------SRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH------EREVAGA 411 (437)
T ss_pred HHHHHHHHHHhcCCcc---------ccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH------HHHHHHH
Confidence 3333322222211000 0000 0135666777788899999999988888888888766 4788888
Q ss_pred eehhHHhHhHHHHhhh
Q 007932 184 WWMFSSFIGALCATLG 199 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~ 199 (584)
+..++.++|-.+|..+
T Consensus 412 ~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 412 LMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888877554
No 285
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=79.64 E-value=28 Score=36.83 Aligned_cols=131 Identities=15% Similarity=0.106 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh--cCCchhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 37 EAFERMAFYGIQSNLVNYLTSQ--LHEDTVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTM 114 (584)
Q Consensus 37 ~~~~~~~~~~~~~~~~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~ 114 (584)
..+...+++-+..+...-..+. -+-+..-.|.+-....+...++.+..|++..++ .+..-+.++.+....+..+..+
T Consensus 256 Wa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 256 WAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444333322222 122334467777788888889999999997777 7766666555443433333333
Q ss_pred hhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh
Q 007932 115 AASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG 192 (584)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 192 (584)
+. ..+.+..+++-++.+...-...+.+..-++.....+ +.+..+|++.+..-+-
T Consensus 335 ~~------------------t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e------~yaLVFGiNtf~Al~L 388 (412)
T PF01770_consen 335 SF------------------TGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEE------RYALVFGINTFVALVL 388 (412)
T ss_pred HH------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------ceeeeeeeHHHHHHHH
Confidence 32 267888888888888888888888888888877766 6899998877654433
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.08 E-value=1.2e+02 Score=33.00 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=37.2
Q ss_pred hceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 469 GLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 469 ~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
.-|.++.+..+.++..+..++.....++|.++++.+...+.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358888899999999999999999999999999988877764
No 287
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=70.11 E-value=31 Score=33.95 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=19.4
Q ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 480 EDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 480 ~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
+-+|..+.|+..+..+..+.+.....+-.
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 56777777777777776666666555443
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=69.18 E-value=71 Score=33.07 Aligned_cols=102 Identities=18% Similarity=0.051 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHH
Q 007932 67 VRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLY 146 (584)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (584)
|..=....+...++.+..|++.-++ .|..-++++......+-.+..++. .+++|..+++-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~------------------t~~Iw~~Ya~yv 334 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ------------------TQHIWVCYAGYV 334 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc------------------ccceehhhhhHH
Confidence 4444456677778888889997777 666544444433333323333332 267888999999
Q ss_pred HHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhH
Q 007932 147 IIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGA 193 (584)
Q Consensus 147 ~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 193 (584)
+.........+++..-+++....+ +-+..+|++.+..-+-.
T Consensus 335 lfr~~y~l~itiA~~~iA~nL~~e------~~gLvFGiNTFvAl~lQ 375 (433)
T KOG3810|consen 335 LFRVIYQLTITIATFQIARNLSSE------LFGLVFGINTFVALILQ 375 (433)
T ss_pred HHHhhHhhhhhHHHHHHHHhhhhh------hheeeeehHHHHHHHHH
Confidence 988888888888888888888776 58999998876654433
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.10 E-value=16 Score=30.35 Aligned_cols=41 Identities=12% Similarity=-0.035 Sum_probs=27.7
Q ss_pred HHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007932 74 SGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILLTM 114 (584)
Q Consensus 74 ~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~~~ 114 (584)
.+...+.....||+-|||.|-++..+|.+++...+...+-+
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 34444444566999999999999888777665555544433
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=66.42 E-value=90 Score=34.04 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=49.8
Q ss_pred HHHHHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHhHHHHhhhhhhhhcccchhHHHHHH
Q 007932 145 LYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIGALCATLGLVYIQENLGWGLGYGIP 216 (584)
Q Consensus 145 ~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~ 216 (584)
.+..|+........--..+.+.+|+++ .+...+|-++...++-..+-..+++.+.+.+||+..-.+.
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 334556666666666777888888776 5788888877777777777778888899999999766554
No 291
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=63.08 E-value=31 Score=33.33 Aligned_cols=61 Identities=20% Similarity=0.115 Sum_probs=45.1
Q ss_pred ehhhHHHHHHHHHHHHHHhhhceeeeeccCCc-hhHHHHHHHHHH-HHhHHHHHHHHHHHHhh
Q 007932 449 IFWLLPQYVLLGVADVFNAIGLLEFFYDQSPE-DMQSLGTTFFTS-GIGVGNFLNSFLVTLVD 509 (584)
Q Consensus 449 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~-~~rg~~~gi~~~-~~~lg~~lg~~l~~~i~ 509 (584)
.+.++......+++.+...+....++.+..|+ +.|+...+.... ...++..+++.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555557888888888889999999998 678888888777 56677777776655554
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=63.02 E-value=79 Score=33.38 Aligned_cols=84 Identities=19% Similarity=0.158 Sum_probs=46.1
Q ss_pred ehhhHHHHHHHHHHHHHHhhhceeeeeccCCch-hHHHHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccCCCCCc
Q 007932 449 IFWLLPQYVLLGVADVFNAIGLLEFFYDQSPED-MQSLGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIGDNLND 527 (584)
Q Consensus 449 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~-~rg~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~~~~~~ 527 (584)
.+..+...++.+.+.+......+.... ..|++ .++...| +++++++.+.+.-.......+..
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G-----~a~aG~l~Sl~~i~tka~~~~~~----------- 179 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQAVMSG-----QALAGTLTSLLRILTKAAFSDSR----------- 179 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHHHHhc-----chhHhHHHHHHHHHHHHhcCCCC-----------
Confidence 344556667778888888888888775 45544 4444433 45556555555433322221111
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 007932 528 CHLDYYYGFLMVISILNLGAFF 549 (584)
Q Consensus 528 ~~~~~~f~~~~~~~~~~~l~~~ 549 (584)
.+...+|.+-.++.++|.+.+.
T Consensus 180 ~sA~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 180 TSALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred ceeehhHHHHHHHHHHHHHHHH
Confidence 1222346666666666665555
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.11 E-value=66 Score=34.92 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=21.6
Q ss_pred ccCCchhHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 007932 476 DQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTLV 508 (584)
Q Consensus 476 ~~~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i 508 (584)
.+..++.++.+.......+..|.+++..+.-..
T Consensus 145 T~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 145 TMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 445667788877776666677777765555443
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=59.07 E-value=2.7 Score=42.79 Aligned_cols=161 Identities=11% Similarity=-0.049 Sum_probs=3.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh--h-hhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHH
Q 007932 25 GKWKACAFLVGYEAFERMAFYGIQSNLVNYLTSQLHEDTVS--S-VRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLS 101 (584)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 101 (584)
..+|.+|...+..+...+....+.+....-......-+... . -.+...|.++-.++..+.++.-=+.-.+|++.+ .
T Consensus 140 ~v~~~i~~~~~~i~~~f~vTl~~FP~it~~v~s~~~~~~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~ 218 (309)
T PF01733_consen 140 VVLKKIWPYALSIFLVFFVTLSVFPGITSAVQSSNNPDWSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-L 218 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhheeeeccceeeeeeccccCCCccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHHH-H
Confidence 34456666555555555444434343321122111101111 1 134566788888888887764211102344433 3
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccccCCCCChhhhccccee
Q 007932 102 SLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGADQFDDFNPYERNLKVSF 181 (584)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (584)
.+.-.+...++.+...-|.- .-..+--.+.+.+++.-+++|+..|-.......+..+..+++ +|..+
T Consensus 219 s~~R~~fiPlf~~cn~~p~~-------~~~~~~~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~------e~e~a 285 (309)
T PF01733_consen 219 SLLRFLFIPLFLLCNVQPRP-------RYLPVLFNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPE------ERELA 285 (309)
T ss_dssp -------------------------------------------------------HHHH---------------------
T ss_pred HHHHHHHHHHHHHHHhhccc-------ccCCCcccchHHHHHHHHHHHHccchhhhceeeeCCCcCCHH------HHHHH
Confidence 22222222111111000000 000000134566777788899999999999999999998876 47777
Q ss_pred eeeehhHHhHhHHHHhhh
Q 007932 182 FNWWMFSSFIGALCATLG 199 (584)
Q Consensus 182 ~~~~~~~~~~g~~~g~~~ 199 (584)
..+..+..++|-.+|..+
T Consensus 286 G~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 286 GSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777888888777543
No 295
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=53.61 E-value=3.3e+02 Score=29.64 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=50.3
Q ss_pred HHHhcccccccccccccccCCCCChhhhcccceeeeeehhHHhHh-HHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 007932 148 IAIGAGGTKPNISTFGADQFDDFNPYERNLKVSFFNWWMFSSFIG-ALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVI 226 (584)
Q Consensus 148 ~gi~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~ 226 (584)
.|++.......--+-+.+.+|..+ .++..++-++...++- ..+.-.+++-+.+.+||-..-.+.-+..+++.+.
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~-----~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTN-----EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChh-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 455555666666677788888776 4677777666666665 5555667788888899987666555555555444
Q ss_pred H
Q 007932 227 F 227 (584)
Q Consensus 227 ~ 227 (584)
+
T Consensus 369 F 369 (509)
T COG3202 369 F 369 (509)
T ss_pred H
Confidence 3
No 296
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=52.20 E-value=67 Score=23.13 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHH
Q 007932 71 NNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLG 108 (584)
Q Consensus 71 ~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~ 108 (584)
+....+..+.....|+..|+.+|.++...+..++..+.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 33445555666778999999879877666655544443
No 297
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=46.50 E-value=27 Score=34.36 Aligned_cols=62 Identities=15% Similarity=0.017 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhhhhHHHHHHHHHHHhhhHhHHH---------hhcccchhHHH
Q 007932 35 GYEAFERMAFYGIQSNLVNYLTSQLHEDTVSSVRNVNNWSGVVWITPLLGAYI---------ADTYIGRFWTF 98 (584)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aD~~~Grk~~~ 98 (584)
..-+........+.+++..|++ +.|.++.+...+..+....-.+..++.|.. .||+ |||+..
T Consensus 24 vGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 3455566666677888889987 568888888888888888888888888744 6787 998754
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.92 E-value=65 Score=26.92 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=24.4
Q ss_pred CCchhHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 007932 478 SPEDMQSLGTTFFTSGIGVGNFLNSFLVTLVDK 510 (584)
Q Consensus 478 ~P~~~rg~~~gi~~~~~~lg~~lg~~l~~~i~~ 510 (584)
..++.++.++++-...-.+++++....++++.+
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD 67 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLD 67 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 446788888888888878888777777765544
No 299
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.43 E-value=95 Score=34.62 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=61.9
Q ss_pred ehhhHHHHHHHHHHHHHHhhhceeeeeccCCc----hhHH--HHHHHHHHHHhHHHHHHHHHHHHhhhhhcCCCCCcccC
Q 007932 449 IFWLLPQYVLLGVADVFNAIGLLEFFYDQSPE----DMQS--LGTTFFTSGIGVGNFLNSFLVTLVDKVTGRNGEKGWIG 522 (584)
Q Consensus 449 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~----~~rg--~~~gi~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~w~~ 522 (584)
...+...+.+.++|.+..-|...++-.|++++ +.+. ....-+.+..++|..+...+..++.+. .+|.
T Consensus 152 ~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~------~~w~- 224 (571)
T KOG1237|consen 152 LAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN------VGWK- 224 (571)
T ss_pred HHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc------ccce-
Confidence 34455566677789999999999999999882 2222 455666677888888888877776421 1443
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 007932 523 DNLNDCHLDYYYGFLMVISILNLGAFFWASSRYV 556 (584)
Q Consensus 523 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~ 556 (584)
..|.+.+++.+++.++|+...+.++
T Consensus 225 ---------lgf~i~~~~~~lai~iF~~g~~~y~ 249 (571)
T KOG1237|consen 225 ---------LGFGIPTVLNALAILIFLPGFPFYR 249 (571)
T ss_pred ---------eeccHHHHHHHHHHHHHHcCceeEE
Confidence 2366777777777766666555444
No 300
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=39.09 E-value=1.3e+02 Score=31.67 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=21.3
Q ss_pred HHhhhceeeeeccCCchhHHHHHHHHHHHHhHHHHHHHHH
Q 007932 465 FNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFL 504 (584)
Q Consensus 465 ~~~~~~~~~~~~~~P~~~rg~~~gi~~~~~~lg~~lg~~l 504 (584)
......-.+...+..++.-|-+.......+..|.+++..+
T Consensus 149 tQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 149 TQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred hhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 3333333334445556666666666555556666665444
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.89 E-value=1.2e+02 Score=25.24 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=18.3
Q ss_pred HHHHhhhHhHHHhhcccchhHHHHHHHHHHHH
Q 007932 76 VVWITPLLGAYIADTYIGRFWTFTLSSLIYVL 107 (584)
Q Consensus 76 ~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~ 107 (584)
+..+...+.|+..|+.+|-++.+.+.+++..+
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 33444556677778866776655555444333
No 302
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=32.52 E-value=1.3e+02 Score=27.03 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=45.2
Q ss_pred HHhhcccchhHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCcCCCCcchHHHHHHHHHHHHHhcccccccccccccc
Q 007932 86 YIADTYIGRFWTFTLSSLIYVLGMILLTMAASLKFMKPTCTNGICSKTSTSQIAFFYSSLYIIAIGAGGTKPNISTFGAD 165 (584)
Q Consensus 86 ~laD~~~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~g~~~~~~~~~~~~ 165 (584)
.++||. .||+.+...+-.++|...+...-.+..- ...+-+....+.+...++|+|.- .+.+.+++.
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~~---------~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSa 121 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKSR---------QIVDVPPWAVLLVSLVFFGLGLL---GISYGILSA 121 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHhc---------cccccCchHHHHHHHHHHHHHHH---hhhhhhccc
Confidence 467887 4555555544444444333322111110 00012334445444444444432 123334444
Q ss_pred cCCCCChhhhcccceeeeeehhHHhHhHHH
Q 007932 166 QFDDFNPYERNLKVSFFNWWMFSSFIGALC 195 (584)
Q Consensus 166 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 195 (584)
-.+++ +-|++.|+-.+-.|++-..
T Consensus 122 SWD~~------r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 122 SWDPE------REGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred ccCCC------CCCCcccHHHHHHhHHHHH
Confidence 45555 5799999999988887653
No 303
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=31.24 E-value=54 Score=25.67 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=28.0
Q ss_pred ehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCcee
Q 007932 185 WMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYR 235 (584)
Q Consensus 185 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 235 (584)
.+....++++++ .+.|++.+. .+..++..++..++++++...-.+.++
T Consensus 13 ~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 13 MQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 344555666666 567777664 466667666666666655544444443
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=30.92 E-value=4.5e+02 Score=24.64 Aligned_cols=33 Identities=9% Similarity=0.130 Sum_probs=17.6
Q ss_pred hhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHH
Q 007932 186 MFSSFIGALCATLGLVYIQENLGWGLGYGIPTAG 219 (584)
Q Consensus 186 ~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~ 219 (584)
+...-++..+|..+++.+.+..+. +..+++.+.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 344445555666666666666664 344444443
No 305
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.60 E-value=54 Score=26.51 Aligned_cols=50 Identities=30% Similarity=0.388 Sum_probs=28.6
Q ss_pred eehhHHhHhHHHHhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhCCceee
Q 007932 184 WWMFSSFIGALCATLGLVYIQENLGWGLGYGIPTAGLLFSLVIFYIGSPIYRH 236 (584)
Q Consensus 184 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 236 (584)
+++....+|+++|- +-|+..+.++|. +| +.++..++..++.....|.|++
T Consensus 27 ~~q~ilti~aiVg~-i~Gf~~Qqls~t-vy-~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 27 FQQLILTIGAIVGF-IYGFAQQQLSVT-VY-IVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHH-HH-HHHHHHHHHHHhcCCCchhhhc
Confidence 45667788888884 555666666664 33 3334444455554444555544
No 306
>PRK11469 hypothetical protein; Provisional
Probab=26.69 E-value=4.4e+02 Score=24.61 Aligned_cols=53 Identities=11% Similarity=0.210 Sum_probs=34.0
Q ss_pred cCCchhhhhhHHHHHHHHHHHhhh-HhHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 59 LHEDTVSSVRNVNNWSGVVWITPL-LGAYIADTYIGRFWTFTLSSLIYVLGMILL 112 (584)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~-~~G~laD~~~Grk~~~~~~~~~~~~~~~~~ 112 (584)
.|.+......+++..++....... ++.++.+++ |||.-++-|.++..+|.-.+
T Consensus 129 ~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 129 LQVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666665555554 444455666 88888888888877776433
No 307
>COG2119 Predicted membrane protein [Function unknown]
Probab=24.89 E-value=5e+02 Score=24.20 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=25.8
Q ss_pred HHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHH
Q 007932 73 WSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGM 109 (584)
Q Consensus 73 ~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~ 109 (584)
-.+...++.+.+.++++|+ -.|++-.++.+++.+..
T Consensus 143 ~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~fa 178 (190)
T COG2119 143 MILASVLAVLLGKLIAGKL-PERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHH
Confidence 3456667778889999998 88887777765554433
No 308
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=24.43 E-value=5e+02 Score=23.71 Aligned_cols=39 Identities=15% Similarity=-0.008 Sum_probs=20.1
Q ss_pred HHHHHHhhhhcCCc------hhhhhhHHHHHHHHHHHhhhHhHHH
Q 007932 49 SNLVNYLTSQLHED------TVSSVRNVNNWSGVVWITPLLGAYI 87 (584)
Q Consensus 49 ~~~~~yl~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~G~l 87 (584)
+..|.-+|+-.|++ .....|.-....+...+.+++.|..
T Consensus 40 PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~~ 84 (168)
T PF07099_consen 40 PNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGFL 84 (168)
T ss_pred CCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554456666666 2233444444455555555555544
No 309
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=22.63 E-value=4.7e+02 Score=21.98 Aligned_cols=49 Identities=16% Similarity=0.210 Sum_probs=39.3
Q ss_pred hhhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 63 TVSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILL 112 (584)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~ 112 (584)
+...|-+...|..+..+.+++.+|..|+. -+-+-=++|..+..+|..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHhe
Confidence 46778999999999999999999999998 77666667766666665443
No 310
>PRK02237 hypothetical protein; Provisional
Probab=20.81 E-value=2.4e+02 Score=23.66 Aligned_cols=48 Identities=19% Similarity=0.163 Sum_probs=38.0
Q ss_pred hhhhhHHHHHHHHHHHhhhHhHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007932 64 VSSVRNVNNWSGVVWITPLLGAYIADTYIGRFWTFTLSSLIYVLGMILL 112 (584)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~~~~~~~ 112 (584)
+..|-+...|..+..+.+++.+|..|+. -+-+-=++|..+..+|..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHh
Confidence 4589999999999999999999999998 66666666666666665443
Done!