Query 007933
Match_columns 584
No_of_seqs 387 out of 2769
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 14:04:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kdj_B Protein phosphatase 2C 100.0 8.5E-45 2.9E-49 378.2 14.7 267 299-581 9-313 (316)
2 2p8e_A PPM1B beta isoform vari 100.0 7.8E-45 2.7E-49 377.0 13.4 261 296-576 21-301 (307)
3 3qn1_B Protein phosphatase 2C 100.0 8.6E-45 2.9E-49 381.6 11.7 267 300-582 15-337 (337)
4 2iq1_A Protein phosphatase 2C 100.0 3E-44 1E-48 366.5 14.4 247 299-579 8-268 (274)
5 3d8k_A PP2C, protein phosphata 100.0 6.7E-44 2.3E-48 379.9 14.9 259 298-581 12-332 (377)
6 1a6q_A Phosphatase 2C; catalyt 100.0 6.3E-44 2.1E-48 380.8 12.9 262 296-579 19-298 (382)
7 2i0o_A Ser/Thr phosphatase; be 100.0 2.1E-43 7.2E-48 365.6 15.9 249 296-573 20-304 (304)
8 4da1_A Protein phosphatase 1K, 100.0 2E-43 6.9E-48 378.0 16.2 276 269-579 88-382 (389)
9 2i44_A Serine-threonine phosph 100.0 3.6E-43 1.2E-47 366.7 15.9 260 297-575 20-323 (324)
10 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.4E-42 4.9E-47 368.2 14.8 254 299-577 13-337 (364)
11 2irm_A Mitogen-activated prote 100.0 2.2E-42 7.5E-47 366.1 9.7 240 313-574 28-357 (358)
12 2j4o_A Mitogen-activated prote 100.0 5.3E-42 1.8E-46 368.4 7.9 253 298-576 26-369 (401)
13 2pnq_A [pyruvate dehydrogenase 100.0 1.5E-40 5E-45 363.0 13.0 251 313-574 46-456 (467)
14 2pk0_A Serine/threonine protei 100.0 7.9E-37 2.7E-41 306.4 9.9 233 298-574 5-247 (250)
15 1txo_A Putative bacterial enzy 100.0 3.1E-36 1.1E-40 299.7 10.8 225 297-574 3-237 (237)
16 2j82_A TPPHA, protein serine-t 100.0 3.1E-35 1.1E-39 292.8 12.5 229 300-572 2-240 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 2.3E-34 7.8E-39 285.7 10.4 221 298-572 5-233 (234)
18 3rnr_A Stage II sporulation E 100.0 4.4E-31 1.5E-35 259.2 7.1 197 333-572 8-211 (211)
19 1mzk_A Kinase associated prote 99.9 3.4E-24 1.2E-28 196.9 12.7 135 175-309 5-139 (139)
20 4h87_A Kanadaptin; FHA domain 99.9 4.3E-22 1.5E-26 180.6 10.2 110 166-287 8-127 (130)
21 1uht_A Expressed protein; FHA 99.8 1.4E-20 4.9E-25 167.9 10.6 106 173-292 8-114 (118)
22 3gqs_A Adenylate cyclase-like 99.8 1.1E-20 3.9E-25 165.3 9.7 98 175-288 2-101 (106)
23 3va4_A Mediator of DNA damage 99.8 5.3E-20 1.8E-24 167.2 10.4 113 164-289 12-126 (132)
24 2xt9_B Putative signal transdu 99.8 5.6E-20 1.9E-24 163.3 9.3 96 175-288 9-104 (115)
25 2kb3_A Oxoglutarate dehydrogen 99.8 8.5E-20 2.9E-24 168.1 9.9 95 175-287 44-138 (143)
26 2jpe_A Nuclear inhibitor of pr 99.8 4.1E-20 1.4E-24 169.9 6.5 107 168-286 25-132 (140)
27 3po8_A RV0020C protein, putati 99.8 1.7E-19 5.7E-24 156.2 9.8 94 175-288 3-96 (100)
28 1r21_A Antigen KI-67; beta san 99.8 1.8E-19 6.1E-24 163.1 8.8 102 172-290 7-109 (128)
29 2kfu_A RV1827 PThr 22; FHA dom 99.8 2.2E-19 7.6E-24 168.5 8.8 95 175-287 53-147 (162)
30 3hx1_A SLR1951 protein; P74513 99.8 9.2E-19 3.2E-23 159.0 9.4 101 177-293 10-118 (131)
31 3oun_A Putative uncharacterize 99.7 1.2E-18 4.1E-23 162.1 7.9 92 175-286 65-156 (157)
32 3els_A PRE-mRNA leakage protei 99.7 6.2E-18 2.1E-22 158.1 8.9 97 175-283 29-146 (158)
33 3elv_A PRE-mRNA leakage protei 99.7 9.3E-18 3.2E-22 161.8 8.9 95 177-283 78-193 (205)
34 3t91_A Stage II sporulation pr 99.7 4.2E-17 1.4E-21 162.3 12.6 193 315-575 19-222 (242)
35 1qu5_A Protein kinase SPK1; FH 99.7 1.1E-17 3.8E-22 159.9 6.6 112 164-287 16-145 (182)
36 1lgp_A Cell cycle checkpoint p 99.7 4.3E-17 1.5E-21 144.8 9.6 92 177-282 4-96 (116)
37 1wln_A Afadin; beta sandwich, 99.7 5E-17 1.7E-21 145.3 10.0 93 177-286 11-111 (120)
38 2jqj_A DNA damage response pro 99.7 3.8E-17 1.3E-21 152.0 9.5 95 175-287 16-120 (151)
39 1g3g_A Protien kinase SPK1; FH 99.7 4.1E-17 1.4E-21 153.7 8.9 97 175-282 31-135 (164)
40 1dmz_A Protein (protein kinase 99.7 2.4E-17 8.4E-22 154.3 7.0 100 176-287 4-121 (158)
41 2csw_A Ubiquitin ligase protei 99.7 4.1E-17 1.4E-21 150.7 7.2 90 175-281 15-110 (145)
42 2pie_A E3 ubiquitin-protein li 99.7 1.5E-16 5.2E-21 145.7 10.3 91 175-281 7-102 (138)
43 3pu9_A Protein serine/threonin 99.6 1.9E-15 6.5E-20 150.9 14.1 195 316-576 23-227 (242)
44 1gxc_A CHK2, CDS1, serine/thre 99.6 4.1E-16 1.4E-20 144.6 8.4 92 176-283 29-132 (149)
45 1g6g_A Protein kinase RAD53; b 99.6 1.5E-15 5E-20 137.1 10.4 95 178-283 6-108 (127)
46 2ff4_A Probable regulatory pro 99.6 2.4E-15 8.4E-20 160.4 8.3 84 187-287 296-379 (388)
47 4a0e_A YSCD, type III secretio 99.5 2.8E-14 9.7E-19 126.3 8.7 94 176-288 3-97 (123)
48 3f79_A Probable two-component 99.5 8.8E-14 3E-18 139.4 13.1 195 319-573 51-253 (255)
49 4ejq_A Kinesin-like protein KI 99.5 3.6E-14 1.2E-18 132.2 8.1 91 179-284 40-138 (154)
50 3fm8_A Kinesin-like protein KI 99.5 8.9E-14 3E-18 124.6 8.1 89 177-284 26-118 (124)
51 3zt9_A Serine phosphatase; hyd 99.4 5.8E-13 2E-17 128.3 12.2 177 316-571 16-193 (193)
52 3huf_A DNA repair and telomere 99.4 5.3E-13 1.8E-17 135.5 7.7 96 177-286 1-109 (325)
53 3uv0_A Mutator 2, isoform B; F 99.2 2.1E-11 7.2E-16 103.1 4.7 76 192-286 15-97 (102)
54 3i6u_A CDS1, serine/threonine- 99.0 3.6E-10 1.2E-14 121.1 8.7 95 176-286 9-115 (419)
55 3kt9_A Aprataxin; FHA domain, 99.0 1.6E-09 5.5E-14 93.2 10.1 91 180-287 7-97 (102)
56 2brf_A Bifunctional polynucleo 98.8 7.2E-09 2.5E-13 90.1 8.2 91 178-286 10-104 (110)
57 1wv3_A Similar to DNA segregat 98.7 1.2E-08 3.9E-13 101.6 5.6 71 203-287 93-167 (238)
58 4egx_A Kinesin-like protein KI 98.6 4.5E-08 1.5E-12 93.5 8.1 91 178-284 69-168 (184)
59 1ujx_A Polynucleotide kinase 3 98.6 3.6E-08 1.2E-12 86.8 6.8 93 176-286 15-111 (119)
60 3ke6_A Protein RV1364C/MT1410; 98.6 5.2E-07 1.8E-11 96.2 17.2 194 320-575 53-259 (399)
61 1yj5_C 5' polynucleotide kinas 98.6 8.1E-08 2.8E-12 86.5 8.4 93 177-287 9-105 (143)
62 3eq2_A Probable two-component 97.7 0.00015 5.2E-09 76.4 11.6 65 501-574 322-393 (394)
63 1wv3_A Similar to DNA segregat 30.1 44 0.0015 32.3 4.4 33 203-239 22-54 (238)
64 2l6w_A Beta-type platelet-deri 30.8 15 0.00052 25.3 0.0 20 10-29 17-36 (39)
65 1p9k_A ORF, hypothetical prote 24.3 45 0.0015 26.1 2.7 32 246-286 46-77 (79)
66 2k1k_A Ephrin type-A receptor 22.0 86 0.0029 21.4 3.3 12 17-28 25-36 (38)
No 1
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=8.5e-45 Score=378.20 Aligned_cols=267 Identities=24% Similarity=0.340 Sum_probs=207.8
Q ss_pred ccccccCChhHHhhcCccCCCccceeeccCCCC-------------CCccceeeeecCCCcchhhhhhhhhhHHHHHHHh
Q 007933 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-------------VDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL 365 (584)
Q Consensus 299 ~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~-------------~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l 365 (584)
..+|++++ +|+|+.|||++++..++.. .....+|||||||||+.+|++|++.+++.|.+.+
T Consensus 9 ~~~g~~s~------~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~ 82 (316)
T 3kdj_B 9 PLYGFTSI------CGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEI 82 (316)
T ss_dssp -CEEEEEE------CTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEe------EeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHH
Confidence 45788876 4999999999998654322 2357899999999999999999999999998776
Q ss_pred hhhhhh--hhhhccCChhHHHHHHhhhhhhhhhcc---cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeee
Q 007933 366 SDSLKR--ERLLSQCDASDVLRDAFFQTEASMNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKM 440 (584)
Q Consensus 366 ~~~~~~--e~~~~~~~~~~~L~~af~~~d~~i~~~---~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qL 440 (584)
...... ........+.++|+++|..+++.+... .+|||++++++..+ + +|+|||||||+|++++|++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~---l~vanvGDSR~yl~r~g~~~~l 157 (316)
T 3kdj_B 83 AKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPS--H---IFVANCGDSRAVLCRGKTALPL 157 (316)
T ss_dssp HHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSS--E---EEEEEESSCEEEEEETTEEEES
T ss_pred HhhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECC--E---EEEEEccCCEEEEEECCEeccc
Confidence 543110 000112346789999999999887644 57888888877543 2 7899999999999999999999
Q ss_pred cccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcc
Q 007933 441 SEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFW 518 (584)
Q Consensus 441 T~DH~~~~~~E~~RI~~~Gg~i~~-g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLw 518 (584)
|+||++.++.|+.||.+.|+.+.. ...|++| +++||+|||..+|.. ++++|++... . ....++||||||||||
T Consensus 158 T~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~---~~~~pdv~~~-~-~~~~~d~llL~SDGl~ 232 (316)
T 3kdj_B 158 SVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS---IIPDPEVTAV-K-RVKEDDCLILASDGVW 232 (316)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCEEEEE-E-CCTTEEEEEEECHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCC---cCCCCceEEE-E-ecCCCCEEEEEccCcc
Confidence 999999999999999999988742 3358999 999999999988854 8899999732 2 2346899999999999
Q ss_pred eeccHHHHHHHHHHHhhhhc------------------ccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceeee
Q 007933 519 DVISVKKAIQLVVQMREKYS------------------ADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMSC 580 (584)
Q Consensus 519 D~ls~~ei~~lv~~~~~~~~------------------~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~~~~~~~ 580 (584)
|++++++|++++.+...... .....+++.+|+.|++.|+.+|+.||||||||++...+.++.
T Consensus 233 d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~~ 312 (316)
T 3kdj_B 233 DVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKS 312 (316)
T ss_dssp TSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC-----
T ss_pred cCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCcccC
Confidence 99999999999976321000 000246889999999999999999999999999999888776
Q ss_pred E
Q 007933 581 K 581 (584)
Q Consensus 581 k 581 (584)
|
T Consensus 313 ~ 313 (316)
T 3kdj_B 313 K 313 (316)
T ss_dssp -
T ss_pred C
Confidence 5
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=7.8e-45 Score=377.01 Aligned_cols=261 Identities=26% Similarity=0.359 Sum_probs=203.8
Q ss_pred eccccccccCChhHHhhcCccCCCccceeeccCCCC-CCccceeeeecCCCcchhhhhhhhhhHHHHHH--Hhhhhhhh-
Q 007933 296 QIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAA--ILSDSLKR- 371 (584)
Q Consensus 296 ~~~~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~-~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~--~l~~~~~~- 371 (584)
...+.+|+++++ |+|+.|||++++..++++ .+...+|+|||||||+.+|++|++.+++.|.+ .+......
T Consensus 21 ~~~~~~~~~s~~------G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~ 94 (307)
T 2p8e_A 21 GNGLRYGLSSMQ------GWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSG 94 (307)
T ss_dssp ETTEEEEEEEEE------ETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC------
T ss_pred CCCeeEEEEecC------CCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccc
Confidence 357788888874 889999999988644332 23578999999999999999999999998864 22211000
Q ss_pred -hhhhccCChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecc
Q 007933 372 -ERLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSE 442 (584)
Q Consensus 372 -e~~~~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~ 442 (584)
........+.++|+++|..+++.+.+. .+|||++++++. +++ +|+|||||||+|++++|++++||+
T Consensus 95 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~--~~~---l~vanvGDSRa~l~r~g~~~~lT~ 169 (307)
T 2p8e_A 95 SALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMIS--PKH---IYFINCGDSRAVLYRNGQVCFSTQ 169 (307)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEEC--SSE---EEEEEESSCEEEEEETTEEEEECC
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEE--CCc---EEEEEccCcEEEEEECCccccCCC
Confidence 000112346789999999999887642 468888777764 332 789999999999999999999999
Q ss_pred cccccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccc------cccCCCCCccceeeecccccceeeeccC
Q 007933 443 DHRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASD 515 (584)
Q Consensus 443 DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~------~~vs~eP~I~~~~~i~~~~ddflVLaSD 515 (584)
||++.++.|++||..+|+.+... |++| +++||+|||+.+|..+ +.++++|++.. +.+. ..|+|||||||
T Consensus 170 DH~~~~~~E~~rI~~~gg~v~~~--rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~-~~l~-~~d~~llL~SD 245 (307)
T 2p8e_A 170 DHKPCNPREKERIQNAGGSVMIQ--RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYE-ILRA-EEDEFIILACD 245 (307)
T ss_dssp CCCTTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEE-EECC-TTEEEEEEECH
T ss_pred CCCCCCHHHHHHHHHcCCEEEeC--cccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEE-EEcC-CCCeEEEEECC
Confidence 99999999999999999988754 8999 8999999999998642 45788999873 2332 23459999999
Q ss_pred CcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcc
Q 007933 516 GFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTF 576 (584)
Q Consensus 516 GLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~~~ 576 (584)
||||+++++++++++.+.... ..+++.+|+.|++.|+.+|+.||||||||++...+
T Consensus 246 Gl~d~ls~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~ 301 (307)
T 2p8e_A 246 GIWDVMSNEELCEYVKSRLEV-----SDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG 301 (307)
T ss_dssp HHHTTSCHHHHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred CcccCCCHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence 999999999999999764321 35789999999999999999999999999998754
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=8.6e-45 Score=381.55 Aligned_cols=267 Identities=24% Similarity=0.318 Sum_probs=206.4
Q ss_pred cccccCChhHHhhcCccCCCccceeeccCCCC------------------CCccceeeeecCCCcchhhhhhhhhhHHHH
Q 007933 300 GVGVASDPMALRRGAKKLPMEDVCYYHWPLPG------------------VDKFGLFGICDGHGGSAAAKSASEILPKMV 361 (584)
Q Consensus 300 ~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~------------------~~~~~lfgVfDGhGG~~aa~~as~~l~~~l 361 (584)
.+|+++. +|+|..|||++++..++.. .....+|||||||||+.+|++|++.+++.|
T Consensus 15 ~~G~~s~------~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l 88 (337)
T 3qn1_B 15 LWGTVSI------QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFAL 88 (337)
T ss_dssp CEEEEEE------CTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHH
T ss_pred ceEEEEe------eeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHH
Confidence 3677776 4999999999998644211 125779999999999999999999999999
Q ss_pred HHHhhhhhhhh-----hhhccCChhHHHHHHhhhhhhhhhcc-------------------cccccEEEEEEEecCCcch
Q 007933 362 AAILSDSLKRE-----RLLSQCDASDVLRDAFFQTEASMNHH-------------------YEGCTATVLLVWADGNANI 417 (584)
Q Consensus 362 ~~~l~~~~~~e-----~~~~~~~~~~~L~~af~~~d~~i~~~-------------------~~GsTatvvli~~~~~~~~ 417 (584)
.+.+....... .......+.++|+++|..+++.+... .+|||++++++..+ +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~--~-- 164 (337)
T 3qn1_B 89 AEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSS--H-- 164 (337)
T ss_dssp HHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSS--E--
T ss_pred HHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECC--E--
Confidence 88765432110 01112457789999999999877642 36888887777533 2
Q ss_pred hhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhhhhhhccccccCCCCC
Q 007933 418 FAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGDKFLKQQDARFSAEPY 495 (584)
Q Consensus 418 ~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~ 495 (584)
+|+|||||||+|++++|++++||+||++.++.|+.||.+.|+.+.. ...|++| +++||+|||+.+|.. ++++|+
T Consensus 165 -l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~---v~~~pd 240 (337)
T 3qn1_B 165 -IVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY---VIPEPE 240 (337)
T ss_dssp -EEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT---SBCCCE
T ss_pred -EEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC---CCCcce
Confidence 7899999999999999999999999999999999999999998742 3368899 999999999988854 888999
Q ss_pred ccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhh----c--------ccccchHHHHHHHHhhhhhhccccC
Q 007933 496 ISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKY----S--------ADKENSTEKIANVLLSEARTLRTKD 563 (584)
Q Consensus 496 I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~----~--------~~~~~~~~~~A~~Lv~~A~~~gs~D 563 (584)
+... .+ ...++|||||||||||++++++|++++.+..... . .....+++.+|+.|++.|+.+|+.|
T Consensus 241 v~~~-~~-~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~D 318 (337)
T 3qn1_B 241 VTFM-PR-SREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKD 318 (337)
T ss_dssp EEEE-EC-CTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCS
T ss_pred EEEE-Ee-CCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCC
Confidence 8732 22 2368899999999999999999999997632110 0 0002467899999999999999999
Q ss_pred CceEEEEecCCcceeeeEe
Q 007933 564 NTSIIFLDFDSTFRMSCKV 582 (584)
Q Consensus 564 NiTvIVv~~~~~~~~~~k~ 582 (584)
|||||||+|...+..+.|+
T Consensus 319 NiTvivv~l~~~~~~~~~~ 337 (337)
T 3qn1_B 319 NISIIVIDLKAQRKFKTRT 337 (337)
T ss_dssp CEEEEEEECCSCC------
T ss_pred CEEEEEEEecCCcccccCC
Confidence 9999999999988776653
No 4
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=366.51 Aligned_cols=247 Identities=27% Similarity=0.385 Sum_probs=202.0
Q ss_pred ccccccCChhHHhhcCccCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 007933 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (584)
Q Consensus 299 ~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (584)
+.+|++++. |+|+.|||++++... .++..+|+|||||||+.+|++|++.+++.|.+.+.. ..
T Consensus 8 ~~~g~~s~~------G~R~~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~---------~~ 69 (274)
T 2iq1_A 8 ENVGCASQI------GKRKENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---------EK 69 (274)
T ss_dssp GGCEEEEEC------CSSSSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT---------CC
T ss_pred CeEEEEecc------cCCCCccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc---------cc
Confidence 457888874 889999999987531 346789999999999999999999999988776542 24
Q ss_pred ChhHHHHHHhhhhhhhhhc----------ccccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccc
Q 007933 379 DASDVLRDAFFQTEASMNH----------HYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (584)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~----------~~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~ 448 (584)
++.++|+++|..+++.+.. ..+|||++++++.. +++ +|++||||||+|++++|++++||+||++..
T Consensus 70 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~-~~~---l~~anvGDSR~~l~r~g~~~~lT~DH~~~~ 145 (274)
T 2iq1_A 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRD-GIE---LVVASVGDSRAILCRKGKPMKLTIDHTPER 145 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEET-TTE---EEEEEESSCEEEEEETTEEEECCCCCCTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEEC-CCE---EEEEEecCceEEEEeCCEeeECCCCCCCcC
Confidence 5778999999999887753 24688887777652 222 679999999999999999999999999999
Q ss_pred hhhhhhhhhcCCcCCC---CCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHH
Q 007933 449 YSERLRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVK 524 (584)
Q Consensus 449 ~~E~~RI~~~Gg~i~~---g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ 524 (584)
+.|++||+++||.+.. +..|++| +++||+|||+.+|..+ ++++|++.. +.+....++|||||||||||+++++
T Consensus 146 ~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~--v~~~pdi~~-~~l~~g~d~~lll~SDGl~d~l~~~ 222 (274)
T 2iq1_A 146 KDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--VIAEPETKR-IKLHHADDSFLVLTTDGINFMVNSQ 222 (274)
T ss_dssp HHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTT--CBCCCEEEE-EECCTTTEEEEEEECHHHHTTCCHH
T ss_pred HHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCC--EEeCCEEEE-EEeCCCCCcEEEEEccCcccCCCHH
Confidence 9999999999998753 3357887 9999999999998653 788999873 2333223569999999999999999
Q ss_pred HHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceee
Q 007933 525 KAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMS 579 (584)
Q Consensus 525 ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~~~~~~ 579 (584)
++++++.+ ..+++++|+.|++.|+.+|+.||+||||++|....+++
T Consensus 223 ei~~~~~~---------~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~~~ 268 (274)
T 2iq1_A 223 EICDFVNQ---------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKEG 268 (274)
T ss_dssp HHHHHHHT---------SSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC----
T ss_pred HHHHHHHH---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCCCC
Confidence 99999865 35789999999999999999999999999999887765
No 5
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=6.7e-44 Score=379.89 Aligned_cols=259 Identities=18% Similarity=0.229 Sum_probs=208.6
Q ss_pred cccccccCChhHHhhcCccCCCcc-----ceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhh
Q 007933 298 PFGVGVASDPMALRRGAKKLPMED-----VCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRE 372 (584)
Q Consensus 298 ~~~vG~asd~~~~~~~G~R~~nED-----~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e 372 (584)
.+.+|.++++ |+|+.||| ++++...+.+.+...+|||||||||+.+|++|++.+++.|.+..
T Consensus 12 ~~~~~~~s~~------G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~------- 78 (377)
T 3d8k_A 12 RTVCASATSR------NRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR------- 78 (377)
T ss_dssp HHHHHHTTTC------EEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS-------
T ss_pred cEEEEEEEcc------CCCCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc-------
Confidence 5678888874 88998755 55554444455678899999999999999999999998885421
Q ss_pred hhhccCChhHHHHHHhhhhhhhhhcc--cccccEEEEEEEecCC------------------------------------
Q 007933 373 RLLSQCDASDVLRDAFFQTEASMNHH--YEGCTATVLLVWADGN------------------------------------ 414 (584)
Q Consensus 373 ~~~~~~~~~~~L~~af~~~d~~i~~~--~~GsTatvvli~~~~~------------------------------------ 414 (584)
....++|+++|..+++.+... .+|||++++++....+
T Consensus 79 -----~~~~~al~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~val 153 (377)
T 3d8k_A 79 -----DVNEEEITRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAM 153 (377)
T ss_dssp -----SSSHHHHHHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEE
T ss_pred -----ccHHHHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceee
Confidence 234689999999999988765 5799998887753210
Q ss_pred ----------cchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCC--CCCeeeec-chhhhhhhhh
Q 007933 415 ----------ANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLK--DGETRLCG-LNLARMLGDK 481 (584)
Q Consensus 415 ----------~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~--~g~~Rv~G-LalsRslGD~ 481 (584)
+.-.+|||||||||+|++++|++++||+||+|.++.|+.||.++|+.+. ++..|++| |++||||||+
T Consensus 154 i~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~ 233 (377)
T 3d8k_A 154 NFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSF 233 (377)
T ss_dssp CGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCG
T ss_pred ecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecCh
Confidence 0013789999999999999999999999999999999999999999885 56679999 9999999999
Q ss_pred hhhccc------cccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhh
Q 007933 482 FLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSE 555 (584)
Q Consensus 482 ~~K~~~------~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~ 555 (584)
.+|... +.++++|+|.. +.+. .+||||||||||||+++++++++.+.... ... ..+++.+|+.|++.
T Consensus 234 ~~k~~~~~~~~~~~v~~~Pdv~~-~~l~--~~D~llL~SDGl~d~ls~~e~v~~v~~~~---~~~-~~~~~~~a~~Lv~~ 306 (377)
T 3d8k_A 234 DFKKGGQGKLQQDLVSAVPDVTT-FFAY--PGDDIVAGTAGAFAHFRSHAAIAAAIALY---PVS-PETVLDAAKAMVVN 306 (377)
T ss_dssp GGSCC---CCSSCSSBCCCEEEE-EEEC--TTCEEEEECGGGGCSCSSHHHHHHHHTTS---CCC-GGGHHHHHHHHHHT
T ss_pred hhhcccccccccCccccCCcEEE-EEcC--CCCEEEEEECCcccCCCcHHHHHHHHHHh---hcc-CCCHHHHHHHHHHH
Confidence 988542 46889999973 2333 57899999999999999999988665421 000 35789999999999
Q ss_pred hhhccccCCceEEEEecCCcceeeeE
Q 007933 556 ARTLRTKDNTSIIFLDFDSTFRMSCK 581 (584)
Q Consensus 556 A~~~gs~DNiTvIVv~~~~~~~~~~k 581 (584)
|+.+|+.||||||||+|...+..+.|
T Consensus 307 A~~~g~~DNiTvivv~~~~~~~~~~~ 332 (377)
T 3d8k_A 307 AKRRKVTKNISTFVRHLPESRTRSQK 332 (377)
T ss_dssp TTTSSCCSCCCEEEEECCSSCCCCCE
T ss_pred HHhcCCCCCEEEEEEEecCCcchhhc
Confidence 99999999999999999998776554
No 6
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=6.3e-44 Score=380.84 Aligned_cols=262 Identities=26% Similarity=0.366 Sum_probs=209.7
Q ss_pred eccccccccCChhHHhhcCccCCCccceeeccCCCC-CCccceeeeecCCCcchhhhhhhhhhHHHHHHH--hhhhhhhh
Q 007933 296 QIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPG-VDKFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLKRE 372 (584)
Q Consensus 296 ~~~~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~-~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~--l~~~~~~e 372 (584)
...+.+|+++++ |+|..|||++++...+++ .....+|||||||||+.+|++|++.+++.|.+. +.....
T Consensus 19 ~~~l~~g~~s~~------G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~-- 90 (382)
T 1a6q_A 19 GNGLRYGLSSMQ------GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG-- 90 (382)
T ss_dssp ETTEEEEEEEEE------ETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSS--
T ss_pred CCceEEEEEecC------CCCCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCC--
Confidence 356778888874 889999999988654432 235789999999999999999999999888641 211000
Q ss_pred hhhccCChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccc
Q 007933 373 RLLSQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDH 444 (584)
Q Consensus 373 ~~~~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH 444 (584)
......+.++|+++|..+++.+... .+|||++++++.. ++ +|+|||||||+|++++|++++||+||
T Consensus 91 -~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~--~~---l~vanvGDSRayl~r~g~~~~LT~DH 164 (382)
T 1a6q_A 91 -APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISP--QH---TYFINCGDSRGLLCRNRKVHFFTQDH 164 (382)
T ss_dssp -SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECS--SE---EEEEEESSCEEEEEETTEEEEECCCC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEEC--Ce---EEEEEcCCCeEEEEECCceEEeCCCC
Confidence 0012345789999999999887642 4688887777753 32 78999999999999999999999999
Q ss_pred cccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccc------cccCCCCCccceeeecccccceeeeccCCc
Q 007933 445 RIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGF 517 (584)
Q Consensus 445 ~~~~~~E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~------~~vs~eP~I~~~~~i~~~~ddflVLaSDGL 517 (584)
++.++.|++||..+|+.+... |++| +++||+|||+.+|..+ +.|+++|++.. +.+....++|||||||||
T Consensus 165 s~~~~~E~~RI~~~gg~v~~~--Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~-~~l~~~~dd~llLaSDGl 241 (382)
T 1a6q_A 165 KPSNPLEKERIQNAGGSVMIQ--RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD-IERSEEDDQFIILACDGI 241 (382)
T ss_dssp CTTSHHHHHHHHHTTCCEETT--EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEE-EECCTTTEEEEEEECHHH
T ss_pred CCCCHHHHHHHHhcCcEEecc--cccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEE-EEccCCCCeEEEEeccCc
Confidence 999999999999999988765 9999 8999999999998653 45788999873 233212467999999999
Q ss_pred ceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCCcceee
Q 007933 518 WDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDSTFRMS 579 (584)
Q Consensus 518 wD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~~~~~~ 579 (584)
||+++++++++++...... ..+++.+|+.|++.|+.+|+.||||||||+|...+..+
T Consensus 242 wd~ls~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~ 298 (382)
T 1a6q_A 242 WDVMGNEELCDFVRSRLEV-----TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVS 298 (382)
T ss_dssp HTTSCHHHHHHHHHHHHTT-----CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCCCC
T ss_pred cCCCChHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCCCC
Confidence 9999999999999764321 35789999999999999999999999999999887643
No 7
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-43 Score=365.65 Aligned_cols=249 Identities=30% Similarity=0.483 Sum_probs=196.6
Q ss_pred eccccccccCChhHHhhcCccCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhh
Q 007933 296 QIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (584)
Q Consensus 296 ~~~~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~ 375 (584)
...+.+|+++++ |+|..|||++++..++ .+...+|||||||||+.+|++|++.+++.|.+... +
T Consensus 20 ~~~~~~~~~s~~------G~R~~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~--------~ 83 (304)
T 2i0o_A 20 NEFLASGSSSMQ------GWRISQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEA--------Y 83 (304)
T ss_dssp CSSEEEEEEEEE------ESSSCCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHH--------H
T ss_pred CCceEEEEeecC------CCCCCccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhh--------c
Confidence 347788888874 8899999999875332 23678999999999999999999999998876431 1
Q ss_pred ccCChhHHHHHHhhhhhhhhhc----------------------ccccccEEEEEEEecCCcchhhcccccCCceeEEee
Q 007933 376 SQCDASDVLRDAFFQTEASMNH----------------------HYEGCTATVLLVWADGNANIFAQCANVGDSACVMNV 433 (584)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~----------------------~~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r 433 (584)
...++.++|+++|..+++.+.. ..+|||++++++. +++ +|+|||||||+|+++
T Consensus 84 ~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~---l~vanvGDSRa~l~r 158 (304)
T 2i0o_A 84 GRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLH--GKD---LYVANAGDSRCVVCR 158 (304)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEE--TTE---EEEEEESSCEEEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEE--CCE---EEEEEccCcEEEEEE
Confidence 1346788999999999887642 2467887777765 332 789999999999999
Q ss_pred cCceeeecccccccchhhhhhhhhcCCcCC-CCCeeeec-chhhhhhhhhhhhcc------ccccCCCCCccceeeeccc
Q 007933 434 DGKQIKMSEDHRIASYSERLRIQETGEPLK-DGETRLCG-LNLARMLGDKFLKQQ------DARFSAEPYISPVVHIDQA 505 (584)
Q Consensus 434 ~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~-~g~~Rv~G-LalsRslGD~~~K~~------~~~vs~eP~I~~~~~i~~~ 505 (584)
+|++++||+||++.++.|+.||.+.||.+. .+ |++| +++||+|||+.+|.. .+.|+++|++.. +.+. .
T Consensus 159 ~g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~--rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~-~~l~-~ 234 (304)
T 2i0o_A 159 NGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEK-ITVG-P 234 (304)
T ss_dssp TTEEEECCCCCCTTSHHHHHHHHHTTCCBCTTS--CBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEE-EECC-T
T ss_pred CCEEEEcCCCcCCcCHHHHHHHHhCCCEEEeCC--eEcCceeccccccCHHHccCccCCccCCeEEeeCeEEE-EEcC-C
Confidence 999999999999999999999999999886 44 8888 899999999998854 235688999873 2333 2
Q ss_pred ccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhh------ccccCCceEEEEecC
Q 007933 506 SKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEART------LRTKDNTSIIFLDFD 573 (584)
Q Consensus 506 ~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~------~gs~DNiTvIVv~~~ 573 (584)
.|.|||||||||||+++++++++++.+.... . ..+++.+|+.|++.|+. .++.||||||||+|+
T Consensus 235 ~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~---~-~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 235 EDEFMVLACDGIWNFMTSEQVVQFVQERINK---P-GMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp TEEEEEEECHHHHTTCCHHHHHHHHHHHHTS---T-TCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred CCeEEEEECcCccccCCHHHHHHHHHHHHhh---c-CCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 3458999999999999999999999864321 0 24789999999999986 458999999999874
No 8
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=2e-43 Score=378.02 Aligned_cols=276 Identities=26% Similarity=0.358 Sum_probs=205.2
Q ss_pred cccCCCCeEEe-----cccceEEEEEeeccceeccccccccCChhHHhhcCccCCCccceeeccCCCCCCccceeeeecC
Q 007933 269 MELTSGDIITL-----GTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDG 343 (584)
Q Consensus 269 ~~L~~Gd~I~l-----G~ts~~~~~vs~q~~~~~~~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgVfDG 343 (584)
..+.+||.|.+ |...+.+..-.+... -.-..+|++++. |+|..|||++++... .+...+||||||
T Consensus 88 l~med~d~i~~~~~q~gg~n~~~~~g~p~p~-~~~~~~g~~s~~------G~R~~NED~~~~~~~---~~~~~l~~VaDG 157 (389)
T 4da1_A 88 LDMEDNDIIEAHREQIGGENLYFQAGKPIPK-ISLENVGCASQI------GKRKENEDRFDFAQL---TDEVLYFAVYDG 157 (389)
T ss_dssp --------------------------------CCGGGCEEEEEC------TTSSSCCEEEEEEEC---SSSEEEEEEEEE
T ss_pred cCCCCCCEeeeeeccccccccceeEcCcCCc-ccceeEEEecCC------CCCCCCcceeeeeec---CCCEEEEEEEEC
Confidence 56888998864 222222211111111 012457777774 889999999987421 356789999999
Q ss_pred CCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc----------cccccEEEEEEEecC
Q 007933 344 HGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH----------YEGCTATVLLVWADG 413 (584)
Q Consensus 344 hGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~----------~~GsTatvvli~~~~ 413 (584)
|||+.+|++|++.+++.|.+.+.. ..++.++|+++|..+++.+... .+|||++++++...
T Consensus 158 ~GG~~~g~~as~~~~~~l~~~~~~---------~~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~- 227 (389)
T 4da1_A 158 HGGPAAADFCHTHMEKCIMDLLPK---------EKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDG- 227 (389)
T ss_dssp ESSTHHHHHHHHHHHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETT-
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcc---------ccCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcC-
Confidence 999999999999999999876653 3457789999999998877532 36888887777532
Q ss_pred CcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCC---CCeeeec-chhhhhhhhhhhhccccc
Q 007933 414 NANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKD---GETRLCG-LNLARMLGDKFLKQQDAR 489 (584)
Q Consensus 414 ~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~---g~~Rv~G-LalsRslGD~~~K~~~~~ 489 (584)
.+ +|+|||||||+|++++|++++||+||++.++.|++||.+.||.+.. +..|++| +++||+|||..+|..+
T Consensus 228 ~~---l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~-- 302 (389)
T 4da1_A 228 IE---LVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG-- 302 (389)
T ss_dssp TE---EEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGT--
T ss_pred Ce---EEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCC--
Confidence 12 6799999999999999999999999999999999999999998753 2357888 9999999999998764
Q ss_pred cCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEE
Q 007933 490 FSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIF 569 (584)
Q Consensus 490 vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIV 569 (584)
++++|++.. +.+....++|||||||||||++++++|++++.+ ..+++++|+.|++.|+.+|+.|||||||
T Consensus 303 v~~~pdi~~-~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~---------~~~~~~~a~~Lv~~A~~~g~~DNiTviv 372 (389)
T 4da1_A 303 VIAEPETKR-IKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ---------CHDPNEAAHAVTEQAIQYGTEDNSTAVV 372 (389)
T ss_dssp CBCCCEEEE-EECCSSSCEEEEEECHHHHTTCCHHHHHHHHHH---------SSSHHHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCCceEE-EEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHh---------cCCHHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 788999973 344433477999999999999999999999975 3578999999999999999999999999
Q ss_pred EecCCcceee
Q 007933 570 LDFDSTFRMS 579 (584)
Q Consensus 570 v~~~~~~~~~ 579 (584)
|+|..++.++
T Consensus 373 v~~~~~~~~~ 382 (389)
T 4da1_A 373 VPFGAWGKYK 382 (389)
T ss_dssp EEECCC----
T ss_pred EEecCCCCCC
Confidence 9999887654
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-43 Score=366.65 Aligned_cols=260 Identities=20% Similarity=0.331 Sum_probs=200.7
Q ss_pred ccccccccCChhHHhhcCccCCCccceeeccCC-CCCCccceeeeecCCCcchhhhhhhhhhHHHHHHH--hhhhhh---
Q 007933 297 IPFGVGVASDPMALRRGAKKLPMEDVCYYHWPL-PGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAI--LSDSLK--- 370 (584)
Q Consensus 297 ~~~~vG~asd~~~~~~~G~R~~nED~~~v~~~~-~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~--l~~~~~--- 370 (584)
..|.+|+++++ |+|+.|||++++.... ++.+...+|||||||||+.+|++|++.+++.|.+. +.+...
T Consensus 20 ~~~~~~~~s~~------G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~ 93 (324)
T 2i44_A 20 PAFDAAIFTDI------GGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLR 93 (324)
T ss_dssp TTEEEEEEEEC------TTSSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred cceEEEEEECC------CCCCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 46778888885 8899999999886332 23456789999999999999999999999998763 221000
Q ss_pred -----hh-hhhccCChhHHHHHHhhhhhhhhhcc-------cccccEEEEEEEecCCcchhhcccccCCceeEEeec---
Q 007933 371 -----RE-RLLSQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVD--- 434 (584)
Q Consensus 371 -----~e-~~~~~~~~~~~L~~af~~~d~~i~~~-------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~--- 434 (584)
.+ ......++.++|+++|..+++.+.+. ..|||+|++++. +++ +|+|||||||+|++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~--~~~---l~vanvGDSRa~l~r~~~~ 168 (324)
T 2i44_A 94 SDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLA--KGF---VAVGHLGDSRIAMGVETPN 168 (324)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEE--TTE---EEEEEESSCEEEEEEEETT
T ss_pred ccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEE--CCe---EEEEEccCceEEEEeccCC
Confidence 00 00012346789999999999877532 468888888743 332 7899999999999997
Q ss_pred C-ceeeecccccccchhhhhhhhhcCCcCC------CCCeeeec-chhhhhhhh----hhhhc-------cccccCCCCC
Q 007933 435 G-KQIKMSEDHRIASYSERLRIQETGEPLK------DGETRLCG-LNLARMLGD----KFLKQ-------QDARFSAEPY 495 (584)
Q Consensus 435 g-~~~qLT~DH~~~~~~E~~RI~~~Gg~i~------~g~~Rv~G-LalsRslGD----~~~K~-------~~~~vs~eP~ 495 (584)
| ++++||+||++.++.|++||.++||.+. ....+..| ++++|++|| +.+|. ..+.++++|+
T Consensus 169 g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pd 248 (324)
T 2i44_A 169 GLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPD 248 (324)
T ss_dssp EEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCE
T ss_pred CceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCE
Confidence 7 8999999999999999999999999872 22345677 999999999 45542 1245788999
Q ss_pred ccceeeecccccc-eeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHH--HHHHHhhhhhhccccCCceEEEEec
Q 007933 496 ISPVVHIDQASKA-FALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEK--IANVLLSEARTLRTKDNTSIIFLDF 572 (584)
Q Consensus 496 I~~~~~i~~~~dd-flVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~--~A~~Lv~~A~~~gs~DNiTvIVv~~ 572 (584)
|.. +.+ ..++ |||||||||||+++++++++++.+.... ..++++ +|+.|++.|+.+|+.||||||||+|
T Consensus 249 v~~-~~l--~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~-----~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~ 320 (324)
T 2i44_A 249 VRV-VRV--TPQHRVMILATDGLWDVMSAAQAVEIAMQARQE-----GRNPAQALVEMTLAEQQSRNQSADNITAMTVFF 320 (324)
T ss_dssp EEE-EEC--CTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEE
T ss_pred EEE-EEc--CCCCeEEEEEcCchhccCCHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEe
Confidence 973 233 3455 9999999999999999999999775321 246888 9999999999999999999999999
Q ss_pred CCc
Q 007933 573 DST 575 (584)
Q Consensus 573 ~~~ 575 (584)
...
T Consensus 321 ~~~ 323 (324)
T 2i44_A 321 KKT 323 (324)
T ss_dssp C--
T ss_pred eCC
Confidence 764
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-42 Score=368.21 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=199.5
Q ss_pred ccccccCChhHHhhcCccCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 007933 299 FGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (584)
Q Consensus 299 ~~vG~asd~~~~~~~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (584)
+.++.++++ |+|+.|||++++..++.+.++..||||||||||+.+|++|++.+++.|.+.. .
T Consensus 13 ~~~~~~s~~------G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~------------~ 74 (364)
T 2isn_A 13 TTTVAATML------GRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS------------E 74 (364)
T ss_dssp EEEEEEEEC------TTSSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS------------S
T ss_pred eEEEEEEcC------CCCCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh------------c
Confidence 456667764 8999999999987666666778999999999999999999999988775311 1
Q ss_pred ChhHHHHHHhhhhhhhhhc-----ccccccEEEEEEEecC----------------------------------------
Q 007933 379 DASDVLRDAFFQTEASMNH-----HYEGCTATVLLVWADG---------------------------------------- 413 (584)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~-----~~~GsTatvvli~~~~---------------------------------------- 413 (584)
...+.|+++|..+++.+.+ ..+|||++++++....
T Consensus 75 ~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 154 (364)
T 2isn_A 75 FTFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELV 154 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----C
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccc
Confidence 1246788999999887743 2578898888775200
Q ss_pred ---------------CcchhhcccccCCceeEEe-ecCceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhh
Q 007933 414 ---------------NANIFAQCANVGDSACVMN-VDGKQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLA 475 (584)
Q Consensus 414 ---------------~~~~~l~vaNVGDSRa~l~-r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-g~~Rv~G-Lals 475 (584)
.+...+|+|||||||+|++ ++|++++||+||++.++.|+.||.++||.+.. +.+|+.| |++|
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~lt 234 (364)
T 2isn_A 155 GRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALS 234 (364)
T ss_dssp CSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCS
T ss_pred ccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeE
Confidence 0001378999999999999 79999999999999999999999999988753 4578888 8999
Q ss_pred hhhhhhhhhccc------cccCCCCCccceeeecccccceeeeccCCcceecc--HHHHHHHHHHHhhhhcccccchHHH
Q 007933 476 RMLGDKFLKQQD------ARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS--VKKAIQLVVQMREKYSADKENSTEK 547 (584)
Q Consensus 476 RslGD~~~K~~~------~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls--~~ei~~lv~~~~~~~~~~~~~~~~~ 547 (584)
|||||+.+|... +.++++|+|.. +.+ ..+||||||||||||+++ ++++.+++....... ..+++.
T Consensus 235 RalGd~~~k~~~~l~~~~~~v~~~Pdv~~-~~l--~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~----~~~~~~ 307 (364)
T 2isn_A 235 RAFGDSDFKMNPNLPPEEQKVIAVPDVRQ-FYA--LSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRS----KGDLEE 307 (364)
T ss_dssp BCEECGGGSCCCSSCGGGSSSBCCCEEEE-EEE--CTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHT----TSCHHH
T ss_pred EEecchhhccccccCcccCceEEEeEEEE-EEC--CCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhc----CCCHHH
Confidence 999999988532 35788999973 233 357799999999999976 889988875432111 347899
Q ss_pred HHHHHhhhhhhccccCCceEEEEecCCcce
Q 007933 548 IANVLLSEARTLRTKDNTSIIFLDFDSTFR 577 (584)
Q Consensus 548 ~A~~Lv~~A~~~gs~DNiTvIVv~~~~~~~ 577 (584)
+|+.|++.|+.+|+.||||||||+|...+.
T Consensus 308 ~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 337 (364)
T 2isn_A 308 VAARVMDYAYDMNSQDNISVMLVAFHNQEV 337 (364)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEEEEcCCCCC
Confidence 999999999999999999999999976543
No 11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-42 Score=366.14 Aligned_cols=240 Identities=16% Similarity=0.253 Sum_probs=191.5
Q ss_pred cCccC---CCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHH-HhhhhhhhhhhhccCChhHHHHHHh
Q 007933 313 GAKKL---PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDSLKRERLLSQCDASDVLRDAF 388 (584)
Q Consensus 313 ~G~R~---~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~-~l~~~~~~e~~~~~~~~~~~L~~af 388 (584)
.|+|. +|||++++.. ..+...+|||||||||+.+|++|++.+++.|.+ .+... ....++.++|+++|
T Consensus 28 ~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~------~~~~~~~~~l~~a~ 98 (358)
T 2irm_A 28 DGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVC------NTDEAVKELIRQSF 98 (358)
T ss_dssp SSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTC------CSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccc------cchhhHHHHHHHHH
Confidence 37776 5999998753 235678999999999999999999999888764 22211 11234678899999
Q ss_pred hhhhhhhhc-------------------------------------------ccccccEEEEEEEecCCcchhhcccccC
Q 007933 389 FQTEASMNH-------------------------------------------HYEGCTATVLLVWADGNANIFAQCANVG 425 (584)
Q Consensus 389 ~~~d~~i~~-------------------------------------------~~~GsTatvvli~~~~~~~~~l~vaNVG 425 (584)
..+++.+.. ..+|||++++++..+. +||||||
T Consensus 99 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~-----l~vAnvG 173 (358)
T 2irm_A 99 MSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSH-----LYLGNIG 173 (358)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSE-----EEEEEES
T ss_pred HHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCE-----EEEEEcc
Confidence 988876632 1378888888886432 7899999
Q ss_pred CceeEEeec---C--ceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhhhhhhhhhc-----------cccc
Q 007933 426 DSACVMNVD---G--KQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARMLGDKFLKQ-----------QDAR 489 (584)
Q Consensus 426 DSRa~l~r~---g--~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~GLalsRslGD~~~K~-----------~~~~ 489 (584)
|||||++++ | ++++||+||+|.++.|++||.++|+.+... |+.|..+||||||+.+|. ..+.
T Consensus 174 DSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--r~~g~llTRalGd~~~K~~~~~~~~~~~~~~~~ 251 (358)
T 2irm_A 174 NCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF--EGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEP 251 (358)
T ss_dssp SCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG--TTCTTCBSBCEECHHHHTTGGGSSSSTTCSSCS
T ss_pred cCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc--CcCCEEcccCCcCHHHhccccccccccccCCCC
Confidence 999999998 8 999999999999999999999999998764 788844999999999884 1235
Q ss_pred cCCCCCccceeeecccccceeeeccCCcceecc----------HHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhh-
Q 007933 490 FSAEPYISPVVHIDQASKAFALLASDGFWDVIS----------VKKAIQLVVQMREKYSADKENSTEKIANVLLSEART- 558 (584)
Q Consensus 490 vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls----------~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~- 558 (584)
++++|+|...+.+. ..++|||||||||||+++ +++|++++.+.... ..+++.+|+.|++.|+.
T Consensus 252 v~~~Pdi~~~~~l~-~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~-----~~~~~~~a~~Lv~~A~~~ 325 (358)
T 2irm_A 252 VIFEPEIVGGIQIT-PACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQN-----QSTLGGVAQSVVHRIVQA 325 (358)
T ss_dssp SBCCCEEEEEEECC-TTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTT-----CCSHHHHHHHHHHHHHHH
T ss_pred EeccCeEEEEEEeC-CCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHh
Confidence 88999997323444 246689999999999999 99999999874321 35789999999999966
Q ss_pred --------------cc--ccCCceEEEEecCC
Q 007933 559 --------------LR--TKDNTSIIFLDFDS 574 (584)
Q Consensus 559 --------------~g--s~DNiTvIVv~~~~ 574 (584)
+| +.||||||||+|..
T Consensus 326 ~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 326 HHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred hhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 47 89999999999864
No 12
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=5.3e-42 Score=368.36 Aligned_cols=253 Identities=20% Similarity=0.286 Sum_probs=193.1
Q ss_pred cccccccCChhHHhhcCccC--------CCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHH-Hhhhh
Q 007933 298 PFGVGVASDPMALRRGAKKL--------PMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAA-ILSDS 368 (584)
Q Consensus 298 ~~~vG~asd~~~~~~~G~R~--------~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~-~l~~~ 368 (584)
.+.+|+++.+ |+|+ +|||++++.. ..+...||||||||||+.+|++|++.+++.|.+ .+...
T Consensus 26 ~~~~G~~~~~------G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~ 96 (401)
T 2j4o_A 26 LSGVGSASNR------SYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAE 96 (401)
T ss_dssp TEEEEEECCE------EECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTT
T ss_pred cCceeEEecc------cccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4566777654 4444 6999998742 235678999999999999999999999887743 11111
Q ss_pred hhhhhhhccCChhHHHHHHhhhhhhhhhc------------------------------------------ccccccEEE
Q 007933 369 LKRERLLSQCDASDVLRDAFFQTEASMNH------------------------------------------HYEGCTATV 406 (584)
Q Consensus 369 ~~~e~~~~~~~~~~~L~~af~~~d~~i~~------------------------------------------~~~GsTatv 406 (584)
....++.++|+++|..+++.+.+ ..+|||+++
T Consensus 97 ------~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~ 170 (401)
T 2j4o_A 97 ------HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVV 170 (401)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEE
T ss_pred ------cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEE
Confidence 01224567888888877654422 146888888
Q ss_pred EEEEecCCcchhhcccccCCceeEEeecC----ceeeecccccccchhhhhhhhhcCCcCCC-CCeeeec-chhhhhhhh
Q 007933 407 LLVWADGNANIFAQCANVGDSACVMNVDG----KQIKMSEDHRIASYSERLRIQETGEPLKD-GETRLCG-LNLARMLGD 480 (584)
Q Consensus 407 vli~~~~~~~~~l~vaNVGDSRa~l~r~g----~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~-g~~Rv~G-LalsRslGD 480 (584)
+++..+ + +|||||||||+|+++++ ++++||+||+|.++.|++||.++|+.+.. ...|++| +++||||||
T Consensus 171 ~li~~~--~---l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd 245 (401)
T 2j4o_A 171 AVLLNN--K---LYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGD 245 (401)
T ss_dssp EEEETT--E---EEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEEC
T ss_pred EEEECC--E---EEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCC
Confidence 887533 2 78999999999999998 99999999999999999999999987521 1136777 899999999
Q ss_pred hhhhcc-----------ccccCCCCCccceeeecccccceeeeccCCcceec--------cHHHHHHHHHHHhhhhcccc
Q 007933 481 KFLKQQ-----------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVI--------SVKKAIQLVVQMREKYSADK 541 (584)
Q Consensus 481 ~~~K~~-----------~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~l--------s~~ei~~lv~~~~~~~~~~~ 541 (584)
+.+|.. .+.++++|+|...+.+. ..|+|||||||||||++ ++++|++++.+....
T Consensus 246 ~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~-~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~----- 319 (401)
T 2j4o_A 246 YKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLD-GVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAK----- 319 (401)
T ss_dssp HHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECT-TCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-----
T ss_pred HhhcccccccccccccCCCCeeccceEEEeEEeC-CCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhc-----
Confidence 988842 24588999997323343 24569999999999999 899999999875322
Q ss_pred cchHHHHHHHHhhhhhh-------ccc--------cCCceEEEEecCCcc
Q 007933 542 ENSTEKIANVLLSEART-------LRT--------KDNTSIIFLDFDSTF 576 (584)
Q Consensus 542 ~~~~~~~A~~Lv~~A~~-------~gs--------~DNiTvIVv~~~~~~ 576 (584)
..+++.+|+.|++.|+. +|+ .||||||||+|....
T Consensus 320 ~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~~ 369 (401)
T 2j4o_A 320 QTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPL 369 (401)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCCC
T ss_pred CCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCCC
Confidence 25789999999999875 565 899999999998643
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=1.5e-40 Score=362.96 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=188.5
Q ss_pred cCccCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHh------hhh---h--------------
Q 007933 313 GAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAIL------SDS---L-------------- 369 (584)
Q Consensus 313 ~G~R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l------~~~---~-------------- 369 (584)
++.|..|||++.+...+. ....||||||||||+.+|++|++.++..|...+ .+. .
T Consensus 46 g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~ 123 (467)
T 2pnq_A 46 LPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHK 123 (467)
T ss_dssp ECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECC
T ss_pred cCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccccccccc
Confidence 688999999998754331 356799999999999999999999999987542 110 0
Q ss_pred ---------------------hhhh-hh-----ccCChhHHHHHHhhhhhhhhhc------------------ccccccE
Q 007933 370 ---------------------KRER-LL-----SQCDASDVLRDAFFQTEASMNH------------------HYEGCTA 404 (584)
Q Consensus 370 ---------------------~~e~-~~-----~~~~~~~~L~~af~~~d~~i~~------------------~~~GsTa 404 (584)
..+. .+ ...++.++|+++|..+|+.+.. ..+||||
T Consensus 124 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa 203 (467)
T 2pnq_A 124 HPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATA 203 (467)
T ss_dssp CTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECE
T ss_pred cccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceE
Confidence 0000 00 1126789999999999987653 2478998
Q ss_pred EEEEEEecCCcchhhcccccCCceeEEee---cC--ceeeecccccccchhhhhhhhhcCCc------CCCCCeeeec-c
Q 007933 405 TVLLVWADGNANIFAQCANVGDSACVMNV---DG--KQIKMSEDHRIASYSERLRIQETGEP------LKDGETRLCG-L 472 (584)
Q Consensus 405 tvvli~~~~~~~~~l~vaNVGDSRa~l~r---~g--~~~qLT~DH~~~~~~E~~RI~~~Gg~------i~~g~~Rv~G-L 472 (584)
+++++..+. +|||||||||||+++ +| ++++||+||++.++.|++||.++|+. +.++ |+.| +
T Consensus 204 ~v~li~~~~-----l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~--Rv~G~l 276 (467)
T 2pnq_A 204 CVAHVDGVD-----LHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--RLLGLL 276 (467)
T ss_dssp EEEEEETTE-----EEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSS--SBTTTB
T ss_pred EEEEEECCE-----EEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecC--cccccc
Confidence 888886432 789999999999998 47 79999999999999999999998853 3344 8999 9
Q ss_pred hhhhhhhhhhhhcc------------------------------ccccCCCCCccceeeecccccceeeeccCCcceecc
Q 007933 473 NLARMLGDKFLKQQ------------------------------DARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS 522 (584)
Q Consensus 473 alsRslGD~~~K~~------------------------------~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls 522 (584)
++||||||+.+|.. .+.++++|+|.. +.+. ..|.|||||||||||+|+
T Consensus 277 ~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~-~~l~-~~D~fLVLaSDGLwd~ls 354 (467)
T 2pnq_A 277 MPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY-HRLR-PQDKFLVLATDGLWETMH 354 (467)
T ss_dssp SSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEE-EECC-TTEEEEEEECHHHHTTSC
T ss_pred ccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEE-EEcC-CCCeEEEEEecCccccCC
Confidence 99999999988742 134789999973 2333 245699999999999999
Q ss_pred HHHHHHHHHHHhhhhccc-c--------------------------cchHHHHHHHHhhhhhhcc---------------
Q 007933 523 VKKAIQLVVQMREKYSAD-K--------------------------ENSTEKIANVLLSEARTLR--------------- 560 (584)
Q Consensus 523 ~~ei~~lv~~~~~~~~~~-~--------------------------~~~~~~~A~~Lv~~A~~~g--------------- 560 (584)
+++|++++.......... + ....+.+|..|+.+|+..+
T Consensus 355 ~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~ 434 (467)
T 2pnq_A 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLS 434 (467)
T ss_dssp HHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-----------------
T ss_pred hHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhc
Confidence 999999998764321100 0 0012567899999998765
Q ss_pred --------ccCCceEEEEecCC
Q 007933 561 --------TKDNTSIIFLDFDS 574 (584)
Q Consensus 561 --------s~DNiTvIVv~~~~ 574 (584)
.+||||||||.|+.
T Consensus 435 ~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 435 LPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp --------CCSCEEEEEEEECH
T ss_pred CCccccccCCCCcEEEEEEeCc
Confidence 48999999999975
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=7.9e-37 Score=306.41 Aligned_cols=233 Identities=16% Similarity=0.186 Sum_probs=178.2
Q ss_pred cccccccCChhHHhhcCc-cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHH-HHhhhhhhhhhhh
Q 007933 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVA-AILSDSLKRERLL 375 (584)
Q Consensus 298 ~~~vG~asd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~-~~l~~~~~~e~~~ 375 (584)
.+.+++++++ |+ |+.|||++++.... +...+|+|||||||+.+|++||+.+++.+. +++.....
T Consensus 5 ~~~~~~~s~~------G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----- 70 (250)
T 2pk0_A 5 YMEISLLTDI------GQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFS----- 70 (250)
T ss_dssp CEEEEEEEEC------CTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCC-----
T ss_pred eEEEEEecCC------CCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccC-----
Confidence 4677888875 77 99999999876432 357899999999999999999999999998 54433210
Q ss_pred ccCChhHHHHHHhhhhhhhhhcc-------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccc
Q 007933 376 SQCDASDVLRDAFFQTEASMNHH-------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIAS 448 (584)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~~-------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~ 448 (584)
....+.+.|+++|..+++.+... .+|||++++++. +++ ++++|+||||+|++++|++++||.||++.+
T Consensus 71 ~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~anvGDsr~~l~r~g~~~~lt~dh~~~~ 145 (250)
T 2pk0_A 71 ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIV--GDN---IIFAHVGDSRIGIVRQGEYHLLTSDHSLVN 145 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECCCCCBHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEE--CCe---EEEEEeCCCeEEEEcCCcEEEeCCCCCHHH
Confidence 01235678889999988877643 257777777664 333 679999999999999999999999999987
Q ss_pred hhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHH
Q 007933 449 YSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAI 527 (584)
Q Consensus 449 ~~E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~ 527 (584)
+.++. |.....+.....+ +++||+||+.. .++|++. .+...++|+||||||||||+++++++.
T Consensus 146 ~~~~~-----g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~ 209 (250)
T 2pk0_A 146 ELVKA-----GQLTEEEAASHPQKNIITQSIGQAN--------PVEPDLG---VHLLEEGDYLVVNSDGLTNMLSNADIA 209 (250)
T ss_dssp HHHHT-----TSSCHHHHHTCCSCCCBSCCBSCSS--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHH
T ss_pred HHHHc-----CCCCHHHHHhCCCcceEEeecCCCC--------CccceEE---EEEcCCCCEEEEECCCCCCCcCHHHHH
Confidence 65443 2211111011223 78999999853 3477775 233346789999999999999999999
Q ss_pred HHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCC
Q 007933 528 QLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDS 574 (584)
Q Consensus 528 ~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~ 574 (584)
+++.+ ..+++++|+.|++.|+.+++.||+||||+++..
T Consensus 210 ~~~~~---------~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 210 TVLTQ---------EKTLDDKNQDLITLANHRGGLDNITVALVYVES 247 (250)
T ss_dssp HHHTS---------SSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC
T ss_pred HHHhc---------CCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence 98854 357899999999999999999999999999874
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=3.1e-36 Score=299.72 Aligned_cols=225 Identities=22% Similarity=0.257 Sum_probs=171.5
Q ss_pred ccccccccCChhHHhhcCc-cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhh
Q 007933 297 IPFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLL 375 (584)
Q Consensus 297 ~~~~vG~asd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~ 375 (584)
+.+.++.++++ |+ |..|||++++ ...+|+|||||||+.+|++||+.+++.+.+.+...
T Consensus 3 ~~~~~~~~s~~------G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~------- 61 (237)
T 1txo_A 3 LVLRYAARSDR------GLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDE------- 61 (237)
T ss_dssp CEEEEEEEEEC------CSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSC-------
T ss_pred eEEEEEEecCC------CCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhC-------
Confidence 34667777774 75 9999999976 24699999999999999999999999887654321
Q ss_pred ccCChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeeccccccc
Q 007933 376 SQCDASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIA 447 (584)
Q Consensus 376 ~~~~~~~~L~~af~~~d~~i~~~--------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~ 447 (584)
...++.+.|+++|..+++.+... ..|||++++++. +++ ++++|+||||+|++++|++++||.||++.
T Consensus 62 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~--~~~---l~~a~vGDsr~~l~r~g~~~~lt~dh~~~ 136 (237)
T 1txo_A 62 PGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFA--GNR---LGLVHIGDSRGYLLRDGELTQITKDDTFV 136 (237)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEE--TTE---EEEEEESSCEEEEEETTEEEECSCCCBHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEE--CCE---EEEEEEccCcEEEEeCCEeEEeCCCCCHH
Confidence 12467888999999988777542 257777666663 333 67999999999999999999999999987
Q ss_pred chhhhhhhhhcCCcCCCC-CeeeecchhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHH
Q 007933 448 SYSERLRIQETGEPLKDG-ETRLCGLNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKA 526 (584)
Q Consensus 448 ~~~E~~RI~~~Gg~i~~g-~~Rv~GLalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei 526 (584)
++.++ .|...... ..+..+..++|++|+. .++|++.. +...++|+||||||||||+++++++
T Consensus 137 ~~~~~-----~G~i~~~~~~~~~~~~~~tr~lg~~---------~~~p~~~~---~~l~~~d~lvl~SDGl~d~l~~~~i 199 (237)
T 1txo_A 137 QTLVD-----EGRITPEEAHSHPQRSLIMRALTGH---------EVEPTLTM---REARAGDRYLLCSDGLSDPVSDETI 199 (237)
T ss_dssp HHHHH-----TTSSCTTGGGGCTTTTCBCCCBSSS---------CCCCEEEE---EECCTTCEEEEECHHHHTTSCHHHH
T ss_pred HHHHH-----cCCCCHHHHhhCccccceeeccCCC---------CccceEEE---EecCCCCEEEEECCCCCCCCCHHHH
Confidence 65332 23211110 0112235688999852 35788762 3334578899999999999999999
Q ss_pred HHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecCC
Q 007933 527 IQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFDS 574 (584)
Q Consensus 527 ~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~~ 574 (584)
.+++.+ .+++++|+.|++.|+.+|+.||+||||++|.+
T Consensus 200 ~~~~~~----------~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~ 237 (237)
T 1txo_A 200 LEALQI----------PEVAESAHRLIELALRGGGPDNVTVVVADLEH 237 (237)
T ss_dssp HHHHTS----------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEEEC
T ss_pred HHHHhc----------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence 999842 47899999999999999999999999999853
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=3.1e-35 Score=292.83 Aligned_cols=229 Identities=24% Similarity=0.293 Sum_probs=165.8
Q ss_pred cccccCChhHHhhcCc-cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccC
Q 007933 300 GVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQC 378 (584)
Q Consensus 300 ~vG~asd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~ 378 (584)
++++++++ |+ |..|||++ +... .... +|+|||||||+.+|++||+.+++.+.+++...... ...
T Consensus 2 ~~~~~s~~------G~~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~----~~~ 66 (240)
T 2j82_A 2 DVAGLTDC------GLIRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED----LQH 66 (240)
T ss_dssp EEEEEEEC------CSSCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred eEEEeCCC------CCCCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc----cch
Confidence 46667764 77 99999999 6422 1234 99999999999999999999999998766543210 034
Q ss_pred ChhHHHHHHhhhhhhhhhcc--------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchh
Q 007933 379 DASDVLRDAFFQTEASMNHH--------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (584)
Q Consensus 379 ~~~~~L~~af~~~d~~i~~~--------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~ 450 (584)
.+.++|+++|..+++.+.+. .+|||++++++...+++ ++++|+||||+|++++|++.+||.||++.++.
T Consensus 67 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~---l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~ 143 (240)
T 2j82_A 67 DPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDR---AWCAHVGDSRIYRWRKDQLQQITSDHTWIAQA 143 (240)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSE---EEEEEESSCEEEEEETTEEEECSCCCBHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCE---EEEEEEccCceEEEeCCEEEEECCCCcHHHHH
Confidence 57789999999998887643 24777776666422333 67999999999999999999999999997654
Q ss_pred hhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHH
Q 007933 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 529 (584)
Q Consensus 451 E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~l 529 (584)
++ .|+.......+..+ +++||+||+.. ..+|++. .+...++|+||||||||||+++++++.++
T Consensus 144 ~~-----~g~i~~~~~~~~~~~~~ltralG~~~--------~~~p~~~---~~~l~~gd~lll~SDGl~d~l~~~~i~~~ 207 (240)
T 2j82_A 144 VQ-----LGSLTIEQARQHPWRHVLSQCLGRED--------LSQIDIQ---PIDLEPGDRLLLCSDGLTEELTDDVISIY 207 (240)
T ss_dssp ---------------------CCCBSCCBSCTT--------CCCCEEE---EEECCTTCEEEEECHHHHTTSCHHHHHHH
T ss_pred HH-----cCCCCHHHHhcCCCcCeEeecCCCCC--------ceeEEEE---EEeeCCCCEEEEECCCCCCCCCHHHHHHH
Confidence 33 33322222122334 78999999852 3577775 23344678999999999999999999998
Q ss_pred HHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEec
Q 007933 530 VVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDF 572 (584)
Q Consensus 530 v~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~ 572 (584)
+. ..+++++|+.|++.|+.+++.||+||||+++
T Consensus 208 l~----------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 208 LS----------EPNVQKAAAALVDAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp HT----------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred Hc----------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence 84 1468999999999999999999999999975
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=2.3e-34 Score=285.68 Aligned_cols=221 Identities=23% Similarity=0.282 Sum_probs=165.7
Q ss_pred cccccccCChhHHhhcCc-cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhc
Q 007933 298 PFGVGVASDPMALRRGAK-KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLS 376 (584)
Q Consensus 298 ~~~vG~asd~~~~~~~G~-R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~ 376 (584)
.+.+++++++ |+ |..|||++++ ...+|+|||||||+ ++.||+.+.+.+.+++...
T Consensus 5 ~~~~~~~s~~------G~~r~~neD~~~~--------~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~-------- 60 (234)
T 2jfr_A 5 VLSAATATDQ------GPVRENNQDACLA--------DGILYAVADGFGAR--GHHASATALKTLSAGFAAA-------- 60 (234)
T ss_dssp EEEEEEEEEC------CSSCSSCCEEEEE--------ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHS--------
T ss_pred eEEEEEecCC------CCCCCcCCCccee--------CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcC--------
Confidence 4567777775 76 9999999965 45699999999998 7777777777776655432
Q ss_pred cCChhHHHHHHhhhhhhhhhcc------cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchh
Q 007933 377 QCDASDVLRDAFFQTEASMNHH------YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYS 450 (584)
Q Consensus 377 ~~~~~~~L~~af~~~d~~i~~~------~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~ 450 (584)
.+ ...|+++|..+++.+... ..|||++++++..+.+. .++++|+||||+|++++|++++||+||++.++.
T Consensus 61 -~~-~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~--~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~ 136 (234)
T 2jfr_A 61 -PD-RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQG--GPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGEL 136 (234)
T ss_dssp -CS-HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGT--SCEEEEESSCCEEEEETTEEEECSCCCBHHHHH
T ss_pred -Cc-HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCcc--EEEEEEEccCceEEEECCEEEEeCCCCCHHHHH
Confidence 12 577888888888777543 16788777776432211 156999999999999999999999999997654
Q ss_pred hhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHH
Q 007933 451 ERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQL 529 (584)
Q Consensus 451 E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~l 529 (584)
++. |...........+ +++||+||+.. ..+|++. .+...++|+||||||||||+++++++.++
T Consensus 137 ~~~-----g~i~~~~~~~~~~~~~~tralG~~~--------~~~~~~~---~~~l~~gd~lll~SDGl~d~~~~~~i~~~ 200 (234)
T 2jfr_A 137 VRM-----GEITRHEARWHPQRHLLTRALGIGP--------HIGPDVF---GIDCGPGDRLLISSDGLFAAADEALIVDA 200 (234)
T ss_dssp HHT-----TSSCHHHHTTCTTTTCBSCCBSSSS--------CCCCEEE---ECCCCTTCEEEEECGGGGTTSCHHHHHHH
T ss_pred HHc-----CCCCHHHHhcCcccceeeecCcCCC--------CceeEEE---EEecCCCCEEEEECCCCccccCHHHHHHH
Confidence 333 2211110001123 67999999842 3577775 23344678999999999999999999999
Q ss_pred HHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEec
Q 007933 530 VVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDF 572 (584)
Q Consensus 530 v~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~ 572 (584)
+ + ..+++.+|+.|++.|+.+++.||+||||+++
T Consensus 201 ~-~---------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 201 A-T---------SPDPQVAVRRLVEVANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp H-T---------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred H-c---------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence 8 4 4678999999999999999999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.96 E-value=4.4e-31 Score=259.15 Aligned_cols=197 Identities=17% Similarity=0.162 Sum_probs=135.8
Q ss_pred CccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhc----ccccccEEEEE
Q 007933 333 DKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNH----HYEGCTATVLL 408 (584)
Q Consensus 333 ~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~----~~~GsTatvvl 408 (584)
++..+|+|||||||+.+|++||+.+.+.+.+.+.... ...++++.+...+.+.... ..+|||+++++
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~---------~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~ 78 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGG---------SPLDAVLAAQAAVHRWASQGGILGRTGATMAVAA 78 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTC---------CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEE
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccC---------CHHHHHHHHHHHHHHHHhhccCCCCcchhheeee
Confidence 4667999999999999999999999999987665421 2233444443333322211 13566666666
Q ss_pred EEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeec-chhhhhhhhhhhhccc
Q 007933 409 VWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG-LNLARMLGDKFLKQQD 487 (584)
Q Consensus 409 i~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~G-LalsRslGD~~~K~~~ 487 (584)
+...+++ ++++||||||+|++++|++++||+||++.++.++.++ . . .+... ..+||++|+..
T Consensus 79 i~~~~~~---~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~-~-----~---~~~~~~~~ltralG~~~----- 141 (211)
T 3rnr_A 79 VNLRDGT---LEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGR-G-----P---VPGPAGEMITSFIGIEN----- 141 (211)
T ss_dssp EETTTTE---EEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTS-C-----C---CCSHHHHCBSCCBTCSS-----
T ss_pred eeeCCCE---EEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCC-C-----h---hhCCCccEEecccCCCC-----
Confidence 6422333 6799999999999999999999999999877555443 1 1 11122 56899999642
Q ss_pred cccCCCCCccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhcc--ccCCc
Q 007933 488 ARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLR--TKDNT 565 (584)
Q Consensus 488 ~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~g--s~DNi 565 (584)
..+|++.. ..+...++|++|||||||||+++++++.+++.+ ..+ |+.|++.|+.+| +.||+
T Consensus 142 ---~~~~~~~~-~~~~l~~gd~llL~SDGl~d~~~~~~i~~~l~~---------~~~----a~~L~~~a~~~g~~~~DNi 204 (211)
T 3rnr_A 142 ---LTEISTSE-APLPLEAGEGVLVVSDGVYRSLHEDRIAMALSR---------GSD----ARGILQEVEAQGRPYQDNA 204 (211)
T ss_dssp ---CCCCEECS-SCEECCTTCEEEEEEC-----CCTTEEEEEECT---------TSC----HHHHHHHHHHSCTTSCSSC
T ss_pred ---CcceeEec-ceecCCCCCEEEEEcCCCCCCcCHHHHHHHHhc---------CCh----HHHHHHHHHHcCCCCCCce
Confidence 23566621 123344688999999999999999998887743 122 889999999999 99999
Q ss_pred eEEEEec
Q 007933 566 SIIFLDF 572 (584)
Q Consensus 566 TvIVv~~ 572 (584)
|||||++
T Consensus 205 Tvivv~L 211 (211)
T 3rnr_A 205 TLALVIL 211 (211)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999985
No 19
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.91 E-value=3.4e-24 Score=196.87 Aligned_cols=135 Identities=65% Similarity=1.051 Sum_probs=105.6
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
...+.|+++.|+..|..|.|.........++|||.+.|||+|+|+.|||+||+|.++.+++.|+|+|+||+|||||||++
T Consensus 5 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~~ 84 (139)
T 1mzk_A 5 SSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHS 84 (139)
T ss_dssp SEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEE
T ss_pred CCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCCCCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCEE
Confidence 44789999999999999999875222226899999999999999999999999999886447999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEeeccceeccccccccCChhH
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMA 309 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~vs~q~~~~~~~~vG~asd~~~ 309 (584)
+..|+...+.++.++.|++||+|++|.+.+.|+.+..+++.+.|+++|.|+|+|+
T Consensus 85 i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 139 (139)
T 1mzk_A 85 ISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMA 139 (139)
T ss_dssp SSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECCC---------------
T ss_pred CcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCCccccCCCCcccccccCC
Confidence 9976555555678899999999999999999999999998889999999999863
No 20
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.86 E-value=4.3e-22 Score=180.63 Aligned_cols=110 Identities=25% Similarity=0.345 Sum_probs=91.1
Q ss_pred ccchhh-ccccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecC---------CCCc
Q 007933 166 FLPKAI-ADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN---------PNKL 235 (584)
Q Consensus 166 ~~p~~~-~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~---------~~~~ 235 (584)
+.|++| .++...++|+|++|+.....+.|.... .++|||.+.|||+|+|+.|||+||.|.+. ....
T Consensus 8 y~~P~wa~~p~~~~~L~v~k~g~~~~~~~L~~~~----~~~IGR~~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~ 83 (130)
T 4h87_A 8 YQEPPWGGPATAPYSLETLKGGTILGTRSLKGTS----YCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGP 83 (130)
T ss_dssp CCCCTTBCCCCSCCEEEEEETTEEEEEEECTTCS----EEEEESSTTSSEECCCTTSCSSCEEEEEBCCCCCC------C
T ss_pred CCCCCCccCCCCCEEEEEEECCeeeeeEEeCCCc----eEEEcCCcCCCEEeCCCCcchhcEEEEEecccCccceeccCC
Confidence 333444 555667999999999988899997652 58999999999999999999999999763 1224
Q ss_pred eeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEEE
Q 007933 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (584)
Q Consensus 236 ~~~l~DlgS~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~ 287 (584)
.|+|+||||+|||||||++|.. +.+++|++||+|+||.++..|+
T Consensus 84 ~~~l~Dl~StNGT~vNg~ri~~--------~~~~~L~~GD~I~~G~str~yv 127 (130)
T 4h87_A 84 GFYLYDLGSTHGTFLNKTRIPP--------RTYCRVHVGHVVRFGGSTRLFI 127 (130)
T ss_dssp CEEEEECSCSSCEEETTEECCT--------TCCEECCTTCEEEETTCSEEEE
T ss_pred cceEeeCCCCCceEECCEECCC--------CceeECCCCCEEEECCceEEEE
Confidence 7999999999999999999984 4568999999999999887764
No 21
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.83 E-value=1.4e-20 Score=167.86 Aligned_cols=106 Identities=33% Similarity=0.556 Sum_probs=94.8
Q ss_pred cccceEEEEEeecCCCceeeeeeccCCCCcceeecCc-CCCcceeeccccccceeEEecCCCCceeeEEecccccccccc
Q 007933 173 DQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRV-SPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLN 251 (584)
Q Consensus 173 ~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~-~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vn 251 (584)
+..+.+.|.+++|+..|..+.|..+. .++|||. +.|||+|+|+.|||+||+|.++++ .|+|+|++|+||||||
T Consensus 8 ~~~p~l~L~v~~g~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 8 MVTPSLRLVFVKGPREGDALDYKPGS----TIRVGRIVRGNEIAIKDAGISTKHLRIESDSG--NWVIQDLGSSNGTLLN 81 (118)
T ss_dssp CCSCEEEEEESSSTTTTCBCCBCTTC----CEEEESSSTTCSEECCSSSSCTTCEEEEECSS--SEEEECCCCSSCCEES
T ss_pred CCCCeEEEEEEeCCCCCcEEEECCCC----EEEEcCCCCCCCEEeCCCCCchHHeEEEEECC--EEEEEECCCCCCeEEC
Confidence 44568999999999999999998742 6999999 899999999999999999999888 8999999999999999
Q ss_pred cccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEeec
Q 007933 252 SQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSE 292 (584)
Q Consensus 252 g~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~vs~q 292 (584)
|+++.. +.++.|++||+|++|.+.+.++.+...
T Consensus 82 g~~l~~--------~~~~~L~~gd~i~lG~~~~~~~~~~~~ 114 (118)
T 1uht_A 82 SNALDP--------ETSVNLGDGDVIKLGEYTSILVNFVSG 114 (118)
T ss_dssp SSBCCT--------TCEEECCTTEEEEETTTEEEEEEEECS
T ss_pred CEECCC--------CCeEEcCCCCEEEECCeEEEEEEEecC
Confidence 999984 456899999999999999888877543
No 22
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.83 E-value=1.1e-20 Score=165.33 Aligned_cols=98 Identities=29% Similarity=0.446 Sum_probs=87.4
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcC-CCcceeeccccccceeEEecC-CCCceeeEEeccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWN-PNKLKWELVDMGSLNGTLLNS 252 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~-~~di~i~d~~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~vng 252 (584)
+..|.|+++.|+..|..+.|..+. .++|||.+ .|||+++|+.|||+||+|.+. ++ .|+|+|++|+|||||||
T Consensus 2 ~~~~~L~v~~G~~~g~~~~l~~~~----~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~~--~~~l~Dl~S~nGt~vng 75 (106)
T 3gqs_A 2 PSRFLLKVLAGANIGAEFHLDSGK----TYIVGSDPQVADIVLSDMSISRQHAKIIIGNDN--SVLIEDLGSKNGVIVEG 75 (106)
T ss_dssp -CEEEEEECC-CCTTCEEEECTTC----EEEEESCTTTCSEECCCTTSCSSCEEEEECTTS--CEEEEECSCSSCCEETT
T ss_pred CceEEEEEEeCCCCcEEEEECCCC----EEEEeECCCcCCEEeCCCCcchhhcEEEECCCC--cEEEEECcCCCCeEECC
Confidence 457899999999999999998763 58999999 799999999999999999998 45 79999999999999999
Q ss_pred ccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 007933 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (584)
Q Consensus 253 ~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~ 288 (584)
+++.. +..|++||.|++|.+.+.|..
T Consensus 76 ~~i~~----------~~~L~~Gd~i~~G~~~~~~~~ 101 (106)
T 3gqs_A 76 RKIEH----------QSTLSANQVVALGTTLFLLVD 101 (106)
T ss_dssp EECSS----------EEECCTTCCEEETTEEEEEEE
T ss_pred EECCC----------CeECCCCCEEEECCEEEEEEc
Confidence 99984 378999999999999988864
No 23
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.81 E-value=5.3e-20 Score=167.22 Aligned_cols=113 Identities=21% Similarity=0.219 Sum_probs=90.9
Q ss_pred CCccchhhccccceEEEEEeecCC-CceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEec
Q 007933 164 PEFLPKAIADQRSCLSLEVVSGPS-RGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDM 242 (584)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~G~~-~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~Dl 242 (584)
+.+.|.+...+ +...|.+++|+. .|+.|.|..+ .++|||.+.|||+|+|+.|||+||+|.+....+.|+|+|+
T Consensus 12 ~~~~~~~~~~~-p~g~L~v~~g~~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl 85 (132)
T 3va4_A 12 SGLVPRGSHME-PIGQLRLFSGTHGPERDFPLYLG-----KNVVGRSPDCSVALPFPSISKQHAVIEISAWNKAPILQDC 85 (132)
T ss_dssp --------CCC-CSEEEEECCBTTBSCEEEEECSE-----EEEEESSTTSSEECCCTTSCTTCEEEEECSTTSCCEEEEC
T ss_pred ccccCccccCC-CcEEEEEEeCCCCCceEEEECCC-----CEEEccCCCCCEEeCCCCcChhHEEEEEEcCCCEEEEEEC
Confidence 44555444433 356899999999 9999999987 7999999999999999999999999999743348999999
Q ss_pred ccccccccccccC-CCCCCCCCCCCCCcccCCCCeEEecccceEEEEE
Q 007933 243 GSLNGTLLNSQPI-NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQI 289 (584)
Q Consensus 243 gS~NGT~vng~~v-~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~v 289 (584)
+|+|||||||+++ -. ++.++.|++||+|++|++.+.|...
T Consensus 86 ~S~NGT~vNg~~i~l~-------~~~~~~L~~GD~I~lG~~~l~f~~~ 126 (132)
T 3va4_A 86 GSLNGTQIVKPPRVLP-------PGVSHRLRDQELILFADFPCQYHRL 126 (132)
T ss_dssp SCSSCEEETTTTEEEC-------TTCCEECCTTCEEEETTEEEEEEEC
T ss_pred CCCCCeEECCEEcccC-------CCCEEECCCCCEEEECCEEEEEEEC
Confidence 9999999999985 11 2456899999999999999988654
No 24
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.80 E-value=5.6e-20 Score=163.32 Aligned_cols=96 Identities=31% Similarity=0.536 Sum_probs=88.7
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
...+.|+++.|+..|..+.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|++|+|||||||++
T Consensus 9 ~~~~~L~v~~g~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 81 (115)
T 2xt9_B 9 SGSALLVVKRGPNAGSRFLLDQP-----TTSAGRHPDSDIFLDDVTVSRRHAEFRLEGG--EFQVVDVGSLNGTYVNREP 81 (115)
T ss_dssp CSCEEEEEEESTTTTCEEEECSS-----EEEEESSTTSSEECCSTTSCSSCEEEEEETT--EEEEEECSCSSCEEETTEE
T ss_pred CCcEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEeCCcccChhheEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 44678999999999999999977 7999999999999999999999999999877 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~ 288 (584)
+.. ..|++||+|++|.+.+.|..
T Consensus 82 i~~-----------~~L~~gd~i~iG~~~l~~~~ 104 (115)
T 2xt9_B 82 VDS-----------AVLANGDEVQIGKFRLVFLT 104 (115)
T ss_dssp CSE-----------EEECTTCEEEETTEEEEEEC
T ss_pred cce-----------EECCCCCEEEECCEEEEEEe
Confidence 883 89999999999999887753
No 25
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.80 E-value=8.5e-20 Score=168.14 Aligned_cols=95 Identities=36% Similarity=0.547 Sum_probs=88.5
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
...+.|.++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|+||+|||||||++
T Consensus 44 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~--~~~l~DlgS~NGT~VNg~~ 116 (143)
T 2kb3_A 44 AGSALLVVKRGPNAGARFLLDQP-----TTTAGRHPESDIFLDDVTVSRRHAEFRINEG--EFEVVDVGSLNGTYVNREP 116 (143)
T ss_dssp SSCEEEEEEESTTTTCEEEECSS-----EEEESSCTTCSBCCCCSSCCSSSEEEEEETT--EEEEEESCCSSCCEETTEE
T ss_pred CccEEEEEEeCCCCCeEEEeCCC-----CeeccCCCCCCEEeCCCCcChhhEEEEEECC--EEEEEECCCcCCeEECCEE
Confidence 44688999999999999999877 7999999999999999999999999999877 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~ 287 (584)
+.. +.|++||+|++|.+.+.|.
T Consensus 117 i~~-----------~~L~~GD~I~iG~~~l~f~ 138 (143)
T 2kb3_A 117 RNA-----------QVMQTGDEIQIGKFRLVFL 138 (143)
T ss_dssp CSE-----------EECCTTEEEEETTEEEEEE
T ss_pred cce-----------EECCCCCEEEECCEEEEEE
Confidence 984 8999999999999988875
No 26
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.79 E-value=4.1e-20 Score=169.87 Aligned_cols=107 Identities=20% Similarity=0.300 Sum_probs=92.0
Q ss_pred chhhccccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCC-CcceeeccccccceeEEecCCCCceeeEEeccccc
Q 007933 168 PKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSP-SDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLN 246 (584)
Q Consensus 168 p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~-~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~N 246 (584)
|.+...+...+.|+++.|+..|..+.|.... .++|||.+. |||+|+|+.|||+||+|.++...+.|+|+|++|+|
T Consensus 25 P~~a~~p~~~~~L~v~~g~~~g~~~~l~~~~----~~~IGR~~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~N 100 (140)
T 2jpe_A 25 PTWAGKPPPGLHLDVVKGDKLIEKLIIDEKK----YYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTH 100 (140)
T ss_dssp CSSBCCCCSSCBEEEESSSSEEEEECCSSCS----BCCBSSCTTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSS
T ss_pred CCcccCCCcCEEEEEEcCCCcceEEEeCCCC----eEEecCCCccCCEEeCCCCcChhheEEEEECCCCcEEEEECCCCC
Confidence 3333444557889999999999999998752 499999998 99999999999999999998722389999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 007933 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (584)
Q Consensus 247 GT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~ 286 (584)
||||||+++.. +.++.|.+||+|++|.+.+.|
T Consensus 101 GT~vNg~~l~~--------~~~~~L~~gd~i~~G~~~~~f 132 (140)
T 2jpe_A 101 GTFLGHIRLEP--------HKPQQIPIDSTVSFGASTRAY 132 (140)
T ss_dssp CEESSSCEECS--------SSCCEECTTCCBBCSSCCCCB
T ss_pred CeEECCEECCC--------CccEECCCCCEEEECCceEEE
Confidence 99999999983 456899999999999998765
No 27
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.79 E-value=1.7e-19 Score=156.21 Aligned_cols=94 Identities=29% Similarity=0.484 Sum_probs=85.1
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
++.+.|.+..|+ |+.+.+..+ .++|||.+.|||+++|+.|||+||+|.+.++ .|+|+|++|+|||||||++
T Consensus 3 ~~~~~l~~~~g~--g~~~~l~~~-----~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~ 73 (100)
T 3po8_A 3 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 73 (100)
T ss_dssp CEEEEEEECSSS--CCEEECCSE-----EEEEESSTTCSEECCCTTSCSSCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEECCC--CcEEEECCC-----CEEEeCCCCCCEECCCCCcChhhCEEEEeCC--EEEEEECCCCCCEEECCEE
Confidence 345778888886 889999887 7999999999999999999999999999887 8999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~ 288 (584)
+.. .+|++||.|++|.+.+.|..
T Consensus 74 i~~-----------~~L~~gd~i~iG~~~~~~~~ 96 (100)
T 3po8_A 74 VQE-----------WQLADGDVIRLGHSEIIVRM 96 (100)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEEEE
Confidence 874 89999999999999887753
No 28
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.78 E-value=1.8e-19 Score=163.08 Aligned_cols=102 Identities=22% Similarity=0.227 Sum_probs=89.3
Q ss_pred ccccceEEEEEee-cCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccc
Q 007933 172 ADQRSCLSLEVVS-GPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLL 250 (584)
Q Consensus 172 ~~~~~~~~L~v~~-G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~v 250 (584)
........|.++. |+..|..+.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|++|+|||||
T Consensus 7 g~~~~~~~L~v~~~~~~~g~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~i~~~~~--~~~l~Dl~S~nGt~v 79 (128)
T 1r21_A 7 GGMWPTRRLVTIKRSGVDGPHFPLSLS-----TCLFGRGIECDIRIQLPVVSKQHCKIEIHEQ--EAILHNFSSTNPTQV 79 (128)
T ss_dssp --CCCCEEEEEEEETTEEEEEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEECCCCSSSCCEE
T ss_pred CCCCCceEEEEEeCCCCCceEEEECCC-----CEEECCCCCCCEEECCCCCChhHEEEEEECC--EEEEEECCCCCCEEE
Confidence 3444567899987 5888999999876 7999999999999999999999999999887 899999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEe
Q 007933 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQIT 290 (584)
Q Consensus 251 ng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~vs 290 (584)
||+++.+ ++.|++||+|++|.+.+.|....
T Consensus 80 Ng~~i~~----------~~~L~~Gd~i~iG~~~~~~~~~~ 109 (128)
T 1r21_A 80 NGSVIDE----------PVRLKHGDVITIIDRSFRYENES 109 (128)
T ss_dssp TTEECSS----------CEECCTTEEEECSSCEEEEEEC-
T ss_pred CCEECCC----------cEEcCCCCEEEECCEEEEEEeCC
Confidence 9999984 48999999999999988886543
No 29
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.78 E-value=2.2e-19 Score=168.45 Aligned_cols=95 Identities=34% Similarity=0.549 Sum_probs=88.1
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
...+.|.++.|+..|..|.|... .++|||.+.|||+|+|+.|||+||+|.+.++ .|+|+|+||+|||||||++
T Consensus 53 ~~~~~L~v~~G~~~g~~~~L~~~-----~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~--~~~l~DlgS~NGT~VNg~~ 125 (162)
T 2kfu_A 53 PGSALLVVKRGPNAGSRFLLDQA-----ITSAGRHPDSDIFLDDVTVSRRHAEFRLENN--EFNVVDVGSLNGTYVNREP 125 (162)
T ss_dssp SSCCEEEEEESTTCSCEEETTSS-----EEEEESCSSSSEESTTTSSSSCSEEEEEETT--EEEEECCCCSSCEEETTBC
T ss_pred CccEEEEEEeCCCCCeEEEECCC-----CEEECCCCCCCEEECCCCcChhhEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 34678999999999999999876 7999999999999999999999999999877 9999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHV 287 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~ 287 (584)
+.. ..|++||+|++|.+.+.|.
T Consensus 126 i~~-----------~~L~~GD~I~iG~~~l~f~ 147 (162)
T 2kfu_A 126 VDS-----------AVLANGDEVQIGKFRLVFL 147 (162)
T ss_dssp CSE-----------EECCSSCEEEETTEEEEEE
T ss_pred cce-----------EECCCCCEEEECCEEEEEE
Confidence 984 8999999999999988775
No 30
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.76 E-value=9.2e-19 Score=158.96 Aligned_cols=101 Identities=19% Similarity=0.320 Sum_probs=85.8
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCC---ceeeEEec-----cccccc
Q 007933 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNK---LKWELVDM-----GSLNGT 248 (584)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~---~~~~l~Dl-----gS~NGT 248 (584)
...+.++.++..+..|.|... .++|||.+.|||+|+|+.|||+||+|.+.... ..|+|+|+ +|+|||
T Consensus 10 ~~~~lvv~~~~~~~~~~l~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT 84 (131)
T 3hx1_A 10 QEHILIILDDAGRREVLLTET-----FYTIGRSPRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGL 84 (131)
T ss_dssp CEEEEEEEETTEEEEEEECSS-----EEEEESSTTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCE
T ss_pred cceEEEEECCCCcEEEEECCC-----CEEECCCCCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCce
Confidence 345666677777899999887 79999999999999999999999999987321 24999999 899999
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEEEEEeecc
Q 007933 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSET 293 (584)
Q Consensus 249 ~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~vs~q~ 293 (584)
||||+++.. +.|++||+|++|.+.+.++.+..+.
T Consensus 85 ~vNg~~i~~-----------~~L~~GD~I~iG~~~~~~~~~~~~d 118 (131)
T 3hx1_A 85 MINGKKVQE-----------HIIQTGDEIVMGPQVSVRYEYRRRD 118 (131)
T ss_dssp EETTEEESE-----------EECCTTCEEECSTTCEEEEEEECC-
T ss_pred EECCEEeEe-----------EECCCCCEEEECCEEEEEEEEecCC
Confidence 999999984 8999999999999999988775543
No 31
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.2e-18 Score=162.11 Aligned_cols=92 Identities=29% Similarity=0.506 Sum_probs=82.8
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
...+.|.+..|+ +..|.|... .++|||.+.|||+|+|+.|||+||+|.++++ .|+|+|++|+|||||||++
T Consensus 65 g~~l~L~v~~g~--g~~~~L~~~-----~~~IGR~~~~dI~L~d~~VSr~HA~I~~~~~--~~~l~DlgStNGT~VNG~~ 135 (157)
T 3oun_A 65 GTSVTLQLDDGS--GRTYQLREG-----SNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQ--VALLADLNSTNGTTVNNAP 135 (157)
T ss_dssp --CCEEEETTTT--CCEEECCSE-----EEEEESSTTCSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEE
T ss_pred CcEEEEEEcCCC--CeEEEECCC-----cEEEEeCCCCCEEeCCCCcChhHEEEEEECC--EEEEEECCCCCCeEECCEE
Confidence 345677777775 889999887 7999999999999999999999999999887 8999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~ 286 (584)
+.. ..|++||+|+||.+.+.|
T Consensus 136 i~~-----------~~L~~GD~I~lG~~~l~f 156 (157)
T 3oun_A 136 VQE-----------WQLADGDVIRLGHSEIIV 156 (157)
T ss_dssp CSE-----------EECCTTCEEEETTEEEEE
T ss_pred Cce-----------EECCCCCEEEECCEEEEE
Confidence 984 899999999999998876
No 32
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.72 E-value=6.2e-18 Score=158.10 Aligned_cols=97 Identities=26% Similarity=0.339 Sum_probs=82.2
Q ss_pred cceEEEEEeecCC----CceeeeeeccCCCCcceeecCcC---------------CCcceeeccccccceeEEecCCCCc
Q 007933 175 RSCLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNKL 235 (584)
Q Consensus 175 ~~~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~iGR~~---------------~~di~i~d~~VSr~Ha~I~~~~~~~ 235 (584)
...|.|.+.+|+. ....+.|.... .++|||.+ .|||+|+++.|||+||+|.+..+.+
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~~~----~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~ 104 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRG 104 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETT
T ss_pred CCceEEEEEeCCccCcccceEEEecCCC----ceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCC
Confidence 4468999998876 45678887764 69999995 4999999999999999999987721
Q ss_pred --eeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 007933 236 --KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (584)
Q Consensus 236 --~~~l~DlgS~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts 283 (584)
.|+|+|+||+|||||||+++.. +.+++|++||+|++|..+
T Consensus 105 ~~~~~l~Dl~StNGT~VNg~ri~~--------~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 105 ILKCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEEECSCSSCCEETTEECCT--------TCCEECCTTEEEESSSCG
T ss_pred eeEEEEEeCCCCCccEECCEEcCC--------CceEEcCCCCEEEECCCC
Confidence 2999999999999999999984 456899999999999654
No 33
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.71 E-value=9.3e-18 Score=161.82 Aligned_cols=95 Identities=26% Similarity=0.354 Sum_probs=79.9
Q ss_pred eEEEEEeecCC----CceeeeeeccCCCCcceeecCcC---------------CCcceeeccccccceeEEecCCCC--c
Q 007933 177 CLSLEVVSGPS----RGIRCSVQSANASRLPLTLGRVS---------------PSDVLLKDSEVSGKHALINWNPNK--L 235 (584)
Q Consensus 177 ~~~L~v~~G~~----~g~~~~l~~~~~~~~~~~iGR~~---------------~~di~i~d~~VSr~Ha~I~~~~~~--~ 235 (584)
.|.|+|+++.. ....+.|...+ .++|||.+ .|||+|+|+.|||+||.|.+..+. .
T Consensus 78 ~~~L~v~k~g~k~~~~i~~~~L~~~s----~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~ 153 (205)
T 3elv_A 78 MYELVIYRKNDKDKGPWKRYDLNGRS----CYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGIL 153 (205)
T ss_dssp CEEEEEEEGGGCTTCCSEEEECSSCS----EEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeCCCcccccceEEEecCCC----ceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCce
Confidence 58899998765 45678886553 79999995 399999999999999999987542 2
Q ss_pred eeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 007933 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (584)
Q Consensus 236 ~~~l~DlgS~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts 283 (584)
.|+|+||+|+|||||||++|.. +.+++|++||+|++|..+
T Consensus 154 ~~~l~DLgStNGTfVNG~rI~~--------~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 154 KCYVMDLDSSNGTCLNNVVIPG--------ARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEECSCSSCCEETTEECCB--------TSCEECCTTCEEESSSSG
T ss_pred eEEEEeCCCCCCCeECCEECCC--------CceeECCCCCEEEECCCC
Confidence 4999999999999999999984 356899999999999764
No 34
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.71 E-value=4.2e-17 Score=162.27 Aligned_cols=193 Identities=17% Similarity=0.194 Sum_probs=121.3
Q ss_pred ccCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhh
Q 007933 315 KKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEAS 394 (584)
Q Consensus 315 ~R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~ 394 (584)
.+..+.|.|.+... .+...+|+|+||+|+...|.+++..+...+...+... .++.++++.+ ++.
T Consensus 19 ~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~---------~~~~~~l~~~----n~~ 82 (242)
T 3t91_A 19 GGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESG---------IDEKIAIKTI----NSI 82 (242)
T ss_dssp SCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---------CCHHHHHHHH----HHH
T ss_pred ccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---------CCHHHHHHHH----HHH
Confidence 35678899877421 2345579999999999999999988888887654431 1233333333 333
Q ss_pred hhcc---cccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeec
Q 007933 395 MNHH---YEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCG 471 (584)
Q Consensus 395 i~~~---~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~G 471 (584)
+... ..++|++++++....++ ++++|+||+|+|++++|++.+|+.++.|
T Consensus 83 l~~~~~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~------------------------- 134 (242)
T 3t91_A 83 LSLRTTDEIYSTLDLSIIDLQDAS---CKFLKVGSTPSFIKRGDQVMKVQASNLP------------------------- 134 (242)
T ss_dssp HTTC----CCCCEEEEEEETTTCE---EEEEEESCCCEEEEETTEEEECCCC----------------------------
T ss_pred HHhcCCCCeEeEEEEEEEECCCCE---EEEEcCCCCceEEEECCEEEEecCCCce-------------------------
Confidence 3221 34566665555433333 5789999999999999998888655422
Q ss_pred chhhhhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceecc-----HHHHHHHHHHHhhhhcccccchHH
Q 007933 472 LNLARMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVIS-----VKKAIQLVVQMREKYSADKENSTE 546 (584)
Q Consensus 472 LalsRslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls-----~~ei~~lv~~~~~~~~~~~~~~~~ 546 (584)
+| +..+..+. ...+...++|.|+||||||||.++ ...+.+++... ...+++
T Consensus 135 ------lG----------~~~~~~~~-~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~-------~~~~~~ 190 (242)
T 3t91_A 135 ------IG----------IINEFDVE-VVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGL-------KTNDPQ 190 (242)
T ss_dssp ------------------CCCTTCEE-EEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTC-------CCCCHH
T ss_pred ------eE----------ecCCCcce-EEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHHHHHh-------cCCCHH
Confidence 12 00111221 123445578999999999999998 44555554321 135789
Q ss_pred HHHHHHhhhhhhcc-c--cCCceEEEEecCCc
Q 007933 547 KIANVLLSEARTLR-T--KDNTSIIFLDFDST 575 (584)
Q Consensus 547 ~~A~~Lv~~A~~~g-s--~DNiTvIVv~~~~~ 575 (584)
++++.|++.+...+ . .||+|+|++++...
T Consensus 191 ~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~ 222 (242)
T 3t91_A 191 EIADLLMEEVIRTRSGQIEDDMTVVVVRIDHN 222 (242)
T ss_dssp HHHHHHHHHHHHHTTSCCCSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEEEecC
Confidence 99999999998765 3 59999999998754
No 35
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.70 E-value=1.1e-17 Score=159.93 Aligned_cols=112 Identities=16% Similarity=0.157 Sum_probs=91.9
Q ss_pred CCccchhhccccceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCC----------
Q 007933 164 PEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN---------- 233 (584)
Q Consensus 164 ~~~~p~~~~~~~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~---------- 233 (584)
....|.........+.|....++..+..+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+...
T Consensus 16 ~~~~~~~~~~~g~~l~L~~~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~ 92 (182)
T 1qu5_A 16 ENVKSSKKKGNGRFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESP 92 (182)
T ss_dssp GGSSCSCCSSSSCCEEECCCTTSSSCSCCCBTTCCS---SEEESSSTTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSC
T ss_pred hHceecccCCCccEEEEEeCCCCCcceEEEEcCCCc---eEEECCCCCCCEEECCCCcChHHeEEEEecCcccccccccc
Confidence 444555555556677788888887888899987621 4999999999999999999999999998760
Q ss_pred ---CceeeEEecccccccccccccCCCCCCCCCCCCCCcccCCCCeEEe-----cccceEEE
Q 007933 234 ---KLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHV 287 (584)
Q Consensus 234 ---~~~~~l~DlgS~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~l-----G~ts~~~~ 287 (584)
.+.|+|+|+ |+|||||||+++.. +.++.|++||+|++ |.+.+.|.
T Consensus 93 ~~~~~~~~l~Dl-StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~ 145 (182)
T 1qu5_A 93 AQGLDDIWYCHT-GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFK 145 (182)
T ss_dssp CCSCCEEEECCC-SSSCCEETTEECCS--------SEEEECCTTBCCEEEEEGGGTEEEECC
T ss_pred ccccceEEEEEC-CcCCeEECCEEcCC--------CcceEcCCCCEEEEEEcCCCCEEEEEE
Confidence 038999999 99999999999984 45689999999999 99877663
No 36
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.69 E-value=4.3e-17 Score=144.79 Aligned_cols=92 Identities=23% Similarity=0.242 Sum_probs=79.2
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeecc-ccccceeEEecCCCCceeeEEecccccccccccccC
Q 007933 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (584)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~-~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~v 255 (584)
..+|..+.+...+..+.|... .++|||.+.|||+|+|. .|||+||+|.++...+.|+|+| +|+|||||||+++
T Consensus 4 wg~L~~~~~~~~~~~~~l~~~-----~~~iGR~~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l 77 (116)
T 1lgp_A 4 WGRLLRLGAEEGEPHVLLRKR-----EWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKV 77 (116)
T ss_dssp CEEECCTTCCSSSCCEEECSS-----EEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCC
T ss_pred EEEEEEeCCCCCccEEEECCC-----CEEECCCCCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEc
Confidence 446777766677788999877 89999999999999875 9999999999974234899999 9999999999999
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEeccc
Q 007933 256 NHPDSGSRHWGKPMELTSGDIITLGTT 282 (584)
Q Consensus 256 ~~p~~~~r~~g~~~~L~~Gd~I~lG~t 282 (584)
.+ +.++.|++||+|++|..
T Consensus 78 ~~--------~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 78 VK--------KQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CC--------SSCCCCCTTCEEEEECC
T ss_pred CC--------CCcEECCCCCEEEEecc
Confidence 84 45799999999999986
No 37
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.69 E-value=5e-17 Score=145.30 Aligned_cols=93 Identities=16% Similarity=0.073 Sum_probs=79.3
Q ss_pred eEEEEEeec-CCC----ceeeeeeccCCCCcceeecC--cCCCcceeeccccccceeEEecCCCCceeeEEecccccccc
Q 007933 177 CLSLEVVSG-PSR----GIRCSVQSANASRLPLTLGR--VSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTL 249 (584)
Q Consensus 177 ~~~L~v~~G-~~~----g~~~~l~~~~~~~~~~~iGR--~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~ 249 (584)
..+|.++.+ +.. +..+.|..+ .++||| .+.|||+|+++.|||+||+|.+.++ .|+|+|++|+||||
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~~-----~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~dl~S~ngt~ 83 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQLS-----VTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDG--VVTVTPRSMDAETY 83 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCSE-----EEECSSSCCSTTCCCCCCTTCCSSCEEEEESSS--CEEEEESCSSSCEE
T ss_pred cCEEEEeCCChhhccCccEEEEECCC-----CEEECCCCCCCCcEEECCCCCchhheEEEEcCC--EEEEEECCCCCCEE
Confidence 345777654 332 788999887 789996 4799999999999999999999877 89999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccCCCCeEEecc-cceEE
Q 007933 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT-TSSIH 286 (584)
Q Consensus 250 vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~-ts~~~ 286 (584)
|||+++.. ++.|++||.|++|. +.|+|
T Consensus 84 vNg~~i~~----------~~~L~~GD~I~iG~~~~~~f 111 (120)
T 1wln_A 84 VDGQRISE----------TTMLQSGMRLQFGTSHVFKF 111 (120)
T ss_dssp ETSCBCSS----------CEEECTTCEEEETTTEEEEE
T ss_pred ECCEEcCC----------CEECCCCCEEEECCceEEEE
Confidence 99999985 37999999999999 55554
No 38
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.69 E-value=3.8e-17 Score=151.98 Aligned_cols=95 Identities=25% Similarity=0.362 Sum_probs=80.0
Q ss_pred cceEEEEEeecCCCceeeeeec-cCCCCcceeecCcCCCcceeeccccccceeEEec--------CCCCceeeEEecccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQS-ANASRLPLTLGRVSPSDVLLKDSEVSGKHALINW--------NPNKLKWELVDMGSL 245 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~-~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~--------~~~~~~~~l~DlgS~ 245 (584)
.....|.++ ++..|..+.|.. . .++|||.+.|||+|+|+.|||+||+|.+ ..+ .|+|+|+ |+
T Consensus 16 ~~~~~L~~~-~~~~g~~~~l~~~~-----~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~--~~~l~Dl-S~ 86 (151)
T 2jqj_A 16 TCLGHLVNL-IPGKEQKVEITNRN-----VTTIGRSRSCDVILSEPDISTFHAEFHLLQMDVDNFQRN--LINVIDK-SR 86 (151)
T ss_dssp CEEEEEEEE-ETTEEEEEEEECCS-----CEEEESSTTSSEECCCTTCCTTSEEEEEEEEEETTEEEE--EEEEEEC-CS
T ss_pred CceEEEEEe-cCCCceEEEEcCCC-----eEEeCCCCCCCEEECCCCCccccCEEEEecccCCcCcCC--EEEEEEC-CC
Confidence 345566666 455688999985 4 7999999999999999999999999999 444 8999999 99
Q ss_pred cccccccccCCCCCCCCCCCCCCcccCCCCeEEeccc-ceEEE
Q 007933 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT-SSIHV 287 (584)
Q Consensus 246 NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~t-s~~~~ 287 (584)
|||||||+++.. + ++.|++||+|++|.+ .+.|.
T Consensus 87 NGT~VNg~~i~~--------~-~~~L~~GD~I~lG~~~~~~f~ 120 (151)
T 2jqj_A 87 NGTFINGNRLVK--------K-DYILKNGDRIVFGKSCSFLFK 120 (151)
T ss_dssp SCEEETTEECCS--------S-CEEECSSEEEEETTTEEEEEE
T ss_pred CCeEECCEEcCC--------C-ceECCCCCEEEECCCcEEEEE
Confidence 999999999984 3 689999999999995 55554
No 39
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.68 E-value=4.1e-17 Score=153.71 Aligned_cols=97 Identities=27% Similarity=0.279 Sum_probs=83.1
Q ss_pred cceEEEEEeecCCCceeeeeecc------CCCCcceeecCcCCCcceeecc-ccccceeEEecC-CCCceeeEEeccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLN 246 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~------~~~~~~~~iGR~~~~di~i~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~N 246 (584)
...+.|.++.|+..|..+.+... ......++|||.+.|||+|+|+ .|||+||+|.+. ++ .|+|+|+ |+|
T Consensus 31 ~~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~di~l~d~~~vSr~Ha~I~~~~~g--~~~l~Dl-S~N 107 (164)
T 1g3g_A 31 NIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STN 107 (164)
T ss_dssp SCCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESSSSSSEECCCCTTTTSSCEEEEECSTT--CEEEEEC-CSS
T ss_pred CccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCCCCCCEEeCCcCCcChhHEEEEECCCC--CEEEEEC-CCC
Confidence 34678999999999999999853 0011158999999999999997 699999999995 55 8999999 999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccCCCCeEEeccc
Q 007933 247 GTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTT 282 (584)
Q Consensus 247 GT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~t 282 (584)
||||||+++.. +.++.|.+||+|++|.+
T Consensus 108 GT~vNg~~i~~--------~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 108 GTWLNGQKVEK--------NSNQLLSQGDEITVGVG 135 (164)
T ss_dssp CEEETTEEECT--------TEEEECCTTCEEEESCS
T ss_pred CeEECCEEcCC--------CCceEcCCCCEEEECCC
Confidence 99999999984 45699999999999996
No 40
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.68 E-value=2.4e-17 Score=154.31 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=86.0
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCC-------------CceeeEEec
Q 007933 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPN-------------KLKWELVDM 242 (584)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~-------------~~~~~l~Dl 242 (584)
..+.|....+...+..+.|..+.. +++|||.+.|||+|+|+.|||+||+|.+... .+.|+|+|+
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~---~~~IGR~~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl 80 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVN---PFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT 80 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCS---CEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC
T ss_pred eEEEEEeCCCCccceEEEEcCCCc---eEEECCCCCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC
Confidence 357788888888888999986621 5999999999999999999999999998650 038999999
Q ss_pred ccccccccccccCCCCCCCCCCCCCCcccCCCCeEEe-----cccceEEE
Q 007933 243 GSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITL-----GTTSSIHV 287 (584)
Q Consensus 243 gS~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~l-----G~ts~~~~ 287 (584)
|+|||||||+++.+ +.++.|++||+|++ |.+.+.|.
T Consensus 81 -StNGT~VNg~ri~~--------~~~~~L~~GD~I~l~~d~~G~~~l~f~ 121 (158)
T 1dmz_A 81 -GTNVSYLNNNRMIQ--------GTKFLLQDGDEIKIIWDKNNKFVIGFK 121 (158)
T ss_dssp -STTCCEETTEECCS--------SEEEECCSSCCEESCCCTTTTCCCCEE
T ss_pred -CcCCeEECCEEcCC--------CceEEcCCCCEEEEeecCCCCEEEEEE
Confidence 99999999999984 45689999999999 99887774
No 41
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.67 E-value=4.1e-17 Score=150.73 Aligned_cols=90 Identities=27% Similarity=0.389 Sum_probs=76.5
Q ss_pred cceEEEEEeecCCCceeeee-eccCCCCcceeecCcCCCcceeeccc----cccceeEEecC-CCCceeeEEeccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSV-QSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWN-PNKLKWELVDMGSLNGT 248 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l-~~~~~~~~~~~iGR~~~~di~i~d~~----VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT 248 (584)
...|.|. ..|+..+. +.+ ... .++|||.+.|||+|+|+. |||+||+|.+. ++ .|+|+|++|+|||
T Consensus 15 ~~~w~L~-~~G~~~~~-~~l~~~~-----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~g--~~~l~Dl~S~NGT 85 (145)
T 2csw_A 15 GRSWCLR-RVGMSAGW-LLLEDGC-----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPEG--QWTIMDNKSLNGV 85 (145)
T ss_dssp SEEEEEC-CTTCSCCB-EECCTTC-----CEEEESSTTSSEECCCSSCGGGSCTTCEEEEECTTS--CEEEEBSSCSSCE
T ss_pred CccEEEE-EeCCCCCe-EEeCCCC-----cEEECCCCCCCEEECCCCcCCCCChhHeEEEEcCCC--eEEEEECCCCCCe
Confidence 4457677 77877764 444 443 799999999999999998 99999999995 55 7999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecc
Q 007933 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (584)
Q Consensus 249 ~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ 281 (584)
||||+++.. +.++.|++||+|++|.
T Consensus 86 ~vNg~~i~~--------~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 86 WLNRARLEP--------LRVYSIHQGDYIQLGV 110 (145)
T ss_dssp EESSCBCCB--------TCCEECCSSCCEEESC
T ss_pred EECCEECCC--------CccEECCCCCEEEECC
Confidence 999999984 5679999999999998
No 42
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.67 E-value=1.5e-16 Score=145.68 Aligned_cols=91 Identities=26% Similarity=0.383 Sum_probs=75.6
Q ss_pred cceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccc----cccceeEEecC-CCCceeeEEecccccccc
Q 007933 175 RSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE----VSGKHALINWN-PNKLKWELVDMGSLNGTL 249 (584)
Q Consensus 175 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~----VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~ 249 (584)
...|.|.. .|+..+ .+.+.... .++|||.+.|||+|+|+. |||+||+|.+. ++ .|+|+|++|+||||
T Consensus 7 ~~~w~l~~-~G~~~~-~~~l~~~~----~~~IGR~~~~di~l~~~~~~~~VSr~Ha~i~~~~~g--~~~l~Dl~S~NGT~ 78 (138)
T 2pie_A 7 GRSWCLRR-VGMSAG-WLLLEDGC----EVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNPEG--QWTIMDNKSLNGVW 78 (138)
T ss_dssp CEEEEEEE-TTCSSC-BEEECTTC----CEEEESSSSSSEECCCSSCTTSSCSSCEEEEECTTS--CEEEEECSCSSCEE
T ss_pred CccEEEEE-eCCCCC-EEEecCCC----eEEECCCCCCCEEeCCCCcCCCCChhHeEEEEcCCC--cEEEEECCCCCCeE
Confidence 34565544 466654 66666332 699999999999999998 99999999994 55 79999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccCCCCeEEecc
Q 007933 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGT 281 (584)
Q Consensus 250 vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ 281 (584)
|||+++.. +.++.|++||+|++|.
T Consensus 79 vNg~~l~~--------~~~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 79 LNRARLEP--------LRVYSIHQGDYIQLGV 102 (138)
T ss_dssp ETTEECCT--------TCCEECCTTCEEEESC
T ss_pred ECCEEcCC--------CCcEECCCCCEEEECC
Confidence 99999984 5679999999999998
No 43
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.63 E-value=1.9e-15 Score=150.89 Aligned_cols=195 Identities=16% Similarity=0.107 Sum_probs=124.1
Q ss_pred cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhh
Q 007933 316 KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASM 395 (584)
Q Consensus 316 R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i 395 (584)
+..+.|.|.+... .+...+++|+||.|+...|..++..+...+...+... ..+.+++..+-..+....
T Consensus 23 ~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~---------~~~~~~l~~~n~~l~~~~ 90 (242)
T 3pu9_A 23 TRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEG---------VRDGAAARAAHDFLYAMR 90 (242)
T ss_dssp CSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHHHT
T ss_pred cccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcC---------CCHHHHHHHHHHHHHhcc
Confidence 4457799877421 2344568999999999999999988888777655432 122333332222221111
Q ss_pred hcccccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhh
Q 007933 396 NHHYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLA 475 (584)
Q Consensus 396 ~~~~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~GLals 475 (584)
....++|++++.+-...+. ++++|+||+++|++++|++.+|+.+|.+. |+
T Consensus 91 -~~~~~~T~~~~~id~~~~~---l~~~~aG~~~~~l~r~g~~~~l~~~~~~l-----------------------G~--- 140 (242)
T 3pu9_A 91 -DGKVSAALDILSVDLASRS---VLVTRNSEVPMLLGRNGEFEQISESGGRI-----------------------GI--- 140 (242)
T ss_dssp -TTCCCEEEEEEEEETTTTE---EEEEEESCCCEEEEETTEEEEECCCCCCB-----------------------SS---
T ss_pred -CCCcEEEEEEEEEECCCCE---EEEEeCCCCcEEEEECCEEEEeCCCCccc-----------------------cc---
Confidence 1123344444443222322 56899999999999999999999887432 10
Q ss_pred hhhhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccH-------HHHHHHHHHHhhhhcccccchHHHH
Q 007933 476 RMLGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV-------KKAIQLVVQMREKYSADKENSTEKI 548 (584)
Q Consensus 476 RslGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~-------~ei~~lv~~~~~~~~~~~~~~~~~~ 548 (584)
..++.+. ...+...++|.|+|+||||+|..+. +++..+... ...+++++
T Consensus 141 ---------------~~~~~~~-~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~--------~~~~~~~~ 196 (242)
T 3pu9_A 141 ---------------YRHTRPR-VLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVAG--------PETPAQAI 196 (242)
T ss_dssp ---------------CTTCCCE-EEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCC--------TTCCHHHH
T ss_pred ---------------cCCCCce-EEEEEeCCCCEEEEECcCcccCCCCccccccHHHHHHHHhc--------cCCCHHHH
Confidence 0111121 1234455789999999999987653 555433210 13578999
Q ss_pred HHHHhhhhhhcc---ccCCceEEEEecCCcc
Q 007933 549 ANVLLSEARTLR---TKDNTSIIFLDFDSTF 576 (584)
Q Consensus 549 A~~Lv~~A~~~g---s~DNiTvIVv~~~~~~ 576 (584)
++.|++.+...+ ..||+|++++++.+..
T Consensus 197 ~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~~ 227 (242)
T 3pu9_A 197 ADELLEAALVADDGRAGDDMTVVVLRLRNVE 227 (242)
T ss_dssp HHHHHHHHHHHTTTSCSSCEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEEEEEecCC
Confidence 999999998765 6799999999986643
No 44
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.63 E-value=4.1e-16 Score=144.63 Aligned_cols=92 Identities=20% Similarity=0.160 Sum_probs=76.8
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccc---------cccceeEEecCCCC---ceeeEEecc
Q 007933 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSE---------VSGKHALINWNPNK---LKWELVDMG 243 (584)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~---------VSr~Ha~I~~~~~~---~~~~l~Dlg 243 (584)
....|..+.+.. ..+.|... .++|||.+.|||+|+|+. |||+||+|.+..+. +.|+|+|+
T Consensus 29 ~w~~L~~~~~~~--~~i~L~~~-----~~~IGR~~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~- 100 (149)
T 1gxc_A 29 PWARLWALQDGF--ANLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH- 100 (149)
T ss_dssp CCEEEEECSTTC--CCEEECSS-----EEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-
T ss_pred eeEEEEEcCCCC--ceEEECCC-----CEEecCCCCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-
Confidence 355777776533 35788776 799999999999999984 99999999987652 37999996
Q ss_pred cccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 007933 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (584)
Q Consensus 244 S~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts 283 (584)
|+|||||||+++.+ +.++.|++||+|+||...
T Consensus 101 StNGT~VNg~~i~~--------~~~~~L~~GD~I~lG~~~ 132 (149)
T 1gxc_A 101 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSR 132 (149)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTT
T ss_pred CCCCeEECCEECCC--------CCeEECCCCCEEEECCCC
Confidence 99999999999984 567999999999999965
No 45
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.61 E-value=1.5e-15 Score=137.11 Aligned_cols=95 Identities=27% Similarity=0.287 Sum_probs=74.8
Q ss_pred EEEEEeecCCCceeeeeecc------CCCCcceeecCcCCCcceeecc-ccccceeEEecC-CCCceeeEEecccccccc
Q 007933 178 LSLEVVSGPSRGIRCSVQSA------NASRLPLTLGRVSPSDVLLKDS-EVSGKHALINWN-PNKLKWELVDMGSLNGTL 249 (584)
Q Consensus 178 ~~L~v~~G~~~g~~~~l~~~------~~~~~~~~iGR~~~~di~i~d~-~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~ 249 (584)
.+|..+.|+.....+..... ......++|||.+.|||+|+|+ .|||+||+|.++ ++ .|+|+|+ |+||||
T Consensus 6 ~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~~~~di~l~~~~~vSr~Ha~i~~~~~g--~~~l~Dl-S~NGT~ 82 (127)
T 1g6g_A 6 CRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLGEDG--NLLLNDI-STNGTW 82 (127)
T ss_dssp EEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEECTTS--CEEEEEC-CSSCCE
T ss_pred EEEEECCCCCCceEeeccccceeeeeecCCCCEEECCCCCCCEEeCCCCCCChhHeEEEECCCC--cEEEEEC-CcCCeE
Confidence 45666666655544444411 0001158999999999999997 699999999995 55 8999999 999999
Q ss_pred cccccCCCCCCCCCCCCCCcccCCCCeEEecccc
Q 007933 250 LNSQPINHPDSGSRHWGKPMELTSGDIITLGTTS 283 (584)
Q Consensus 250 vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts 283 (584)
|||+++.+ +.++.|.+||+|++|.+.
T Consensus 83 vNg~~l~~--------~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 83 LNGQKVEK--------NSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp ETTEECCT--------TCCEECCTTCEEEECTTS
T ss_pred ECCEEcCC--------CCeEEcCCCCEEEECCCc
Confidence 99999984 467999999999999975
No 46
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.57 E-value=2.4e-15 Score=160.40 Aligned_cols=84 Identities=25% Similarity=0.382 Sum_probs=77.2
Q ss_pred CCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccccCCCCCCCCCCCC
Q 007933 187 SRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWG 266 (584)
Q Consensus 187 ~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~v~~p~~~~r~~g 266 (584)
..|..|.|... .++|||.++|||+|+|+.|||+||+|.+.++ .|+|+|++|+|||||||+++..
T Consensus 296 ~~g~~~~l~~~-----~~~iGR~~~~di~l~~~~vSr~Ha~i~~~~~--~~~l~Dl~S~nGt~vng~~i~~--------- 359 (388)
T 2ff4_A 296 ASGRGYPLQAA-----ATRIGRLHDNDIVLDSANVSRHHAVIVDTGT--NYVINDLRSSNGVHVQHERIRS--------- 359 (388)
T ss_dssp TTCCEEECCSS-----EEEEESSTTSSEECCCTTSCTTCEEEEECSS--CEEEEECSCSSCCEETTEECSS---------
T ss_pred CCCcEEEECCC-----CEEEecCCCCeEEECCCccChhHeEEEEECC--EEEEEECCCCCCeEECCEECCC---------
Confidence 45788999887 7999999999999999999999999999887 8999999999999999999963
Q ss_pred CCcccCCCCeEEecccceEEE
Q 007933 267 KPMELTSGDIITLGTTSSIHV 287 (584)
Q Consensus 267 ~~~~L~~Gd~I~lG~ts~~~~ 287 (584)
++.|++||+|++|.+.+.|.
T Consensus 360 -~~~L~~gd~i~~G~~~~~~~ 379 (388)
T 2ff4_A 360 -AVTLNDGDHIRICDHEFTFQ 379 (388)
T ss_dssp -EEEECTTCEEEETTEEEEEE
T ss_pred -ceECCCCCEEEECCEEEEEE
Confidence 48999999999999988774
No 47
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.51 E-value=2.8e-14 Score=126.32 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=86.8
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcC-CCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVS-PSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~-~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
..|.|.+++|+..|..++|..+ .++||..+ .|||+|.|+.||++||+|...++ +|+|. +|.||||+||++
T Consensus 3 ~~~klrvlsG~~~G~~l~L~~~-----~~~IGs~~~~~DLvL~D~~Vs~~H~~L~~~~~--g~~L~--~s~ngt~vdG~~ 73 (123)
T 4a0e_A 3 GSWVCRFYQGKHRGVEVELPHG-----RCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEE--GIRLT--DSAEPLLQEGLP 73 (123)
T ss_dssp CCEEEEECSGGGTTCEEEECSE-----EEEEESCTTTCSEECCCTTSCSSCEEEEEETT--EEEEE--EESSCCEETTEE
T ss_pred ceEEEEEecCCCCCcEEEcCCC-----cEEECCCCCCCCEEEeCCCccceeEEEEECCC--eEEEE--eccCCEEECCEE
Confidence 4688999999999999999988 89999999 99999999999999999999998 99997 899999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEEecccceEEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQ 288 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~~~ 288 (584)
+.. ...|.+|+.|.+|.+.+.|..
T Consensus 74 v~~----------~~~L~~g~~l~lG~~~l~~~~ 97 (123)
T 4a0e_A 74 VPL----------GTLLRAGSCLEVGFLLWTFVA 97 (123)
T ss_dssp CCT----------TCBCCTTSCEEETTEEEEEEE
T ss_pred ccc----------ccccCCCCEEEEccEEEEEEc
Confidence 874 249999999999999888754
No 48
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.50 E-value=8.8e-14 Score=139.38 Aligned_cols=195 Identities=17% Similarity=0.137 Sum_probs=110.8
Q ss_pred CccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhcc
Q 007933 319 MEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHH 398 (584)
Q Consensus 319 nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~ 398 (584)
.-|.|-+... .+...+++|+||+|+...|.+++..+...+..++..... .......++ .+++..+++.+...
T Consensus 51 gGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~-~~~~~~~~p----~~~l~~ln~~l~~~ 122 (255)
T 3f79_A 51 SGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRR-NGTLPEFKP----SEVLAHINRGLINT 122 (255)
T ss_dssp CSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTT-CCC----CH----HHHHHHHHHHHBTT
T ss_pred CceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcc-ccccccCCH----HHHHHHHHHHHHhc
Confidence 3477644211 234568899999998888888887777777655432110 000001123 33444445544443
Q ss_pred cccccEEEEEEEecCCcchhhcccccCC-ceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhh
Q 007933 399 YEGCTATVLLVWADGNANIFAQCANVGD-SACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARM 477 (584)
Q Consensus 399 ~~GsTatvvli~~~~~~~~~l~vaNVGD-SRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~GLalsRs 477 (584)
..|+.+|++++..+..+.. ++++|+|+ ++.|++++|++.+++.+|.|- |+
T Consensus 123 ~~~~~~T~~~~~id~~~~~-l~~~~aGh~p~~~l~~~g~~~~l~~~~~~l-----------------------G~----- 173 (255)
T 3f79_A 123 KLGKHVTMLGGVIDLEKNS-LTYSIGGHLPLPVLFVEGQAGYLEGRGLPV-----------------------GL----- 173 (255)
T ss_dssp BSSCCEEEEEEEEETTTTE-EEEEECSCSCCCEEEC--CEEECCC----------------------------CC-----
T ss_pred CCCCEEEEEEEEEECCCCE-EEEEeCCCCCceEEEeCCeEEEeCCCCceE-----------------------EE-----
Confidence 4455555555444432211 56899999 568999999999998876431 11
Q ss_pred hhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccHHH-------HHHHHHHHhhhhcccccchHHHHHH
Q 007933 478 LGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISVKK-------AIQLVVQMREKYSADKENSTEKIAN 550 (584)
Q Consensus 478 lGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~~e-------i~~lv~~~~~~~~~~~~~~~~~~A~ 550 (584)
.....+. ...+...++|.|+||||||+|.++.++ +.+++.+. ..+++.+++
T Consensus 174 -------------~~~~~~~-~~~~~l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~--------~~~~~~~~~ 231 (255)
T 3f79_A 174 -------------FDDATYD-DRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------GGTLDGLRQ 231 (255)
T ss_dssp -------------SSCCCCC-C---BCCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH--------SCSSHHHHH
T ss_pred -------------cCCCceE-EEEEEECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc--------CCCHHHHHH
Confidence 0011111 113444578999999999999998777 77777652 235677888
Q ss_pred HHhhhhhhccccCCceEEEEecC
Q 007933 551 VLLSEARTLRTKDNTSIIFLDFD 573 (584)
Q Consensus 551 ~Lv~~A~~~gs~DNiTvIVv~~~ 573 (584)
.|+ .+...+..||||+++++..
T Consensus 232 ~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 232 VFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp HC------CCSSSCEEEEEEEEC
T ss_pred HHH-hccCCCCCCCEEEEEEEec
Confidence 877 5677888999999999864
No 49
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.49 E-value=3.6e-14 Score=132.20 Aligned_cols=91 Identities=16% Similarity=0.249 Sum_probs=74.2
Q ss_pred EEEEe-ecCC-Cc-eeeeeeccCCCCcceeecCcC---CCcceeeccccccceeEEecCCCC--ceeeEEeccccccccc
Q 007933 179 SLEVV-SGPS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK--LKWELVDMGSLNGTLL 250 (584)
Q Consensus 179 ~L~v~-~G~~-~g-~~~~l~~~~~~~~~~~iGR~~---~~di~i~d~~VSr~Ha~I~~~~~~--~~~~l~DlgS~NGT~v 250 (584)
+|.-+ ..|. .+ ..|.|..+ .++|||.+ .|||+|+++.|||+||.|.+.++. ..|++.|++|+|||||
T Consensus 40 hLvnLn~Dp~ls~~lvy~L~~g-----~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~V 114 (154)
T 4ejq_A 40 HLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYV 114 (154)
T ss_dssp EEEECCCCTTCSSEEEEECCSE-----EEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEE
T ss_pred eEEEecCCcccCceEEEEeCCC-----CEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEE
Confidence 45444 3443 23 35668877 79999976 799999999999999999997653 3589999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccCCCCeEEecccce
Q 007933 251 NSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (584)
Q Consensus 251 ng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~ 284 (584)
||++|.+ ++.|++||.|.||.+.+
T Consensus 115 NG~~i~~----------~~~L~~GD~I~~G~~~~ 138 (154)
T 4ejq_A 115 NGKKVTE----------PSILRSGNRIIMGKSHV 138 (154)
T ss_dssp TTEECCS----------CEECCTTCEEEETTTEE
T ss_pred CCEEcCC----------ceECCCCCEEEECCcEE
Confidence 9999985 48999999999998753
No 50
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.46 E-value=8.9e-14 Score=124.60 Aligned_cols=89 Identities=18% Similarity=0.268 Sum_probs=71.7
Q ss_pred eEEEEEeec-CCC-c-eeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecC-CCCceeeEEeccccccccccc
Q 007933 177 CLSLEVVSG-PSR-G-IRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWN-PNKLKWELVDMGSLNGTLLNS 252 (584)
Q Consensus 177 ~~~L~v~~G-~~~-g-~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~-~~~~~~~l~DlgS~NGT~vng 252 (584)
..+|..+.+ |.. + ..+.|.. ..+|||.++|||+|+++.|||+||+|.+. ++ .|+|+|++ +|||||||
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~------~t~IGR~~~~DI~L~~~~Vs~~Ha~I~~~~~g--~~~l~dl~-~ngt~VNG 96 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKE------HTLIGSANSQDIQLCGMGILPEHCIIDITSEG--QVMLTPQK-NTRTFVNG 96 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCS------EEEEESSTTCSEECCSTTCCSSCEEEEECTTS--CEEEEECT-TCCEEETT
T ss_pred ccEEEEeCCCCccCceEEEECCC------CeEECCCCCCCEEECCCCeecceEEEEECCCC--eEEEEECC-CCCEEECC
Confidence 345666654 332 2 3455654 37999999999999999999999999985 44 79999996 79999999
Q ss_pred ccCCCCCCCCCCCCCCcccCCCCeEEecccce
Q 007933 253 QPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (584)
Q Consensus 253 ~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~ 284 (584)
++|.. ++.|++||+|.+|.+.+
T Consensus 97 ~~V~~----------~~~L~~GD~I~lG~~~~ 118 (124)
T 3fm8_A 97 SSVSS----------PIQLHHGDRILWGNNHF 118 (124)
T ss_dssp EECCS----------CEEECTTCEEEETTTEE
T ss_pred EEcCC----------cEECCCCCEEEECCCeE
Confidence 99985 48999999999997654
No 51
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.43 E-value=5.8e-13 Score=128.34 Aligned_cols=177 Identities=16% Similarity=0.178 Sum_probs=114.6
Q ss_pred cCCCccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhh
Q 007933 316 KLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASM 395 (584)
Q Consensus 316 R~~nED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i 395 (584)
+..+.|.|.+.. .+...+++|+||.|....|..++..+...+.+.. ..++.++|+. +++.+
T Consensus 16 ~~v~GD~y~~~~----~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~-----------~~~p~~il~~----ln~~l 76 (193)
T 3zt9_A 16 EIACGDACLVKR----VEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM-----------NTGLVNIFQL----CHREL 76 (193)
T ss_dssp CSSCSEEEEEEE----ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT-----------TSCHHHHHHH----HHHHH
T ss_pred CCCCCCeEEEEE----eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc-----------cCCHHHHHHH----HHHHH
Confidence 345679988752 2356788999999977777777777766665421 1233333333 33333
Q ss_pred hcccccccEEEEEEEecCCcchhhcccccCCceeEEeecCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhh
Q 007933 396 NHHYEGCTATVLLVWADGNANIFAQCANVGDSACVMNVDGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLA 475 (584)
Q Consensus 396 ~~~~~GsTatvvli~~~~~~~~~l~vaNVGDSRa~l~r~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~GLals 475 (584)
.. ..|+|++++.+-....+ +.++|+|+++.|++++++...+...+ +.
T Consensus 77 ~~-~~~~t~~~~~id~~~~~---l~~~~aGh~~~~l~~~~~~~~l~~~~---------------g~-------------- 123 (193)
T 3zt9_A 77 RG-TRGAVAALCRVDRRQGL---WQAAIVGNIHVKILSAKGIITPLATP---------------GI-------------- 123 (193)
T ss_dssp TT-SSCEEEEEEEEETTTTE---EEEEEESSCEEEEEETTEEECCCCBC---------------CB--------------
T ss_pred hc-cCceEEEEEEEECCCCE---EEEEecCCceEEEEcCCcEEEecCCC---------------Cc--------------
Confidence 32 34666665555333333 56899999999999998765543211 11
Q ss_pred hhhhhhhhhccccccCCCC-CccceeeecccccceeeeccCCcceeccHHHHHHHHHHHhhhhcccccchHHHHHHHHhh
Q 007933 476 RMLGDKFLKQQDARFSAEP-YISPVVHIDQASKAFALLASDGFWDVISVKKAIQLVVQMREKYSADKENSTEKIANVLLS 554 (584)
Q Consensus 476 RslGD~~~K~~~~~vs~eP-~I~~~~~i~~~~ddflVLaSDGLwD~ls~~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~ 554 (584)
+|.. .+ .+. ...+...+++.++|+||||+|.++.+++..+. ..+++++|+.|++
T Consensus 124 --lG~~-----------~~~~~~-~~~~~l~~gd~l~l~sDGl~e~~~~~~~~~~~-----------~~~~~~~a~~l~~ 178 (193)
T 3zt9_A 124 --LGYN-----------YPHQLL-IAKGSYQEGDLFLIHSDGIQEGAVPLALLANY-----------RLTAEELVRLIGE 178 (193)
T ss_dssp --BTTB-----------CCSSCC-CEEEECCTTCEEEEECTTSCTTCSCGGGGGCT-----------TSCHHHHHHHHHH
T ss_pred --eecc-----------CCccce-eEEeccCCCCEEEEECCCCCCccChhhhhchh-----------cCCHHHHHHHHHH
Confidence 1200 11 111 12344557899999999999999988765532 3579999999999
Q ss_pred hhhhccccCCceEEEEe
Q 007933 555 EARTLRTKDNTSIIFLD 571 (584)
Q Consensus 555 ~A~~~gs~DNiTvIVv~ 571 (584)
.|. +..||+||+|++
T Consensus 179 ~~~--~~~Dd~tvlv~r 193 (193)
T 3zt9_A 179 KYG--RRDDDVAVIVAR 193 (193)
T ss_dssp HHC--CTTSCEEEEEEC
T ss_pred HhC--cCCCCeEEEEEC
Confidence 983 579999999985
No 52
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.37 E-value=5.3e-13 Score=135.51 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=76.4
Q ss_pred eEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCc---ceeeccccccceeEEecCCC---------CceeeEEeccc
Q 007933 177 CLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSD---VLLKDSEVSGKHALINWNPN---------KLKWELVDMGS 244 (584)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~d---i~i~d~~VSr~Ha~I~~~~~---------~~~~~l~DlgS 244 (584)
+|.|+...+...|+++.|..+ .++|||...++ |.++|++|||+||.|.+... ...++|+||||
T Consensus 1 MWiL~~~~d~~~Gkr~~L~pg-----~YlIGR~~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgS 75 (325)
T 3huf_A 1 MWIIEAEGDILKGKSRILFPG-----TYIVGRNVSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDT 75 (325)
T ss_dssp CEEEEESTTTTTTCCEEECSE-----EEEEESSCCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSC
T ss_pred CcEEeccCccCCCeEEEecCC-----eEEECCCCCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCC
Confidence 366776433457899999888 79999998643 68899999999999988631 12699999999
Q ss_pred ccccccccccCCCCCCCCCCCCCCccc-CCCCeEEecccceEE
Q 007933 245 LNGTLLNSQPINHPDSGSRHWGKPMEL-TSGDIITLGTTSSIH 286 (584)
Q Consensus 245 ~NGT~vng~~v~~p~~~~r~~g~~~~L-~~Gd~I~lG~ts~~~ 286 (584)
+|||||||+++.. ....| .+||.|++|.+...|
T Consensus 76 knGTfVNGerI~~---------~~~~L~~dgd~I~fG~~~~~f 109 (325)
T 3huf_A 76 KFGTKVNEKVVGQ---------NGDSYKEKDLKIQLGKCPFTI 109 (325)
T ss_dssp SSCEEETTEECCT---------TCEEECSSEEEEEETTCSSCE
T ss_pred CCCEEECCEECCC---------ceeeecCCCCEEEecCCcceE
Confidence 9999999999973 23455 479999999987654
No 53
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.15 E-value=2.1e-11 Score=103.14 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=62.1
Q ss_pred eeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccc-ccccccCCCCCCCCCCCCCCcc
Q 007933 192 CSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPME 270 (584)
Q Consensus 192 ~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT-~vng~~v~~p~~~~r~~g~~~~ 270 (584)
..|.... -++|||++.|+++|+|++||+.||.|....+ +.++. . |+||| ||||+++. +..
T Consensus 15 v~l~~~~----~~rIGR~~~~~l~LddpsVs~~HAti~~~~~--G~~~l-~-S~nGtVFVNGqrv~-----------~~~ 75 (102)
T 3uv0_A 15 ILLKADT----IYRIGRQKGLEISIADESMELAHATACILRR--GVVRL-A-ALVGKIFVNDQEET-----------VVD 75 (102)
T ss_dssp EECCTTC----CEEEESSTTSTEECCCTTSCTTCEEEEEEET--TEEEE-E-ESSSCEEETTEEES-----------EEE
T ss_pred EEeecCc----EEEEcCCCCCcEEECCcccccceEEEEecCC--ceEEE-E-eccCcEEECCEEee-----------eEE
Confidence 4455443 6999999999999999999999999998776 55553 3 99995 99999994 289
Q ss_pred cCCCCe------EEecccceEE
Q 007933 271 LTSGDI------ITLGTTSSIH 286 (584)
Q Consensus 271 L~~Gd~------I~lG~ts~~~ 286 (584)
|..||. +++|..+-.+
T Consensus 76 I~~gDtI~g~v~lrFGnvea~l 97 (102)
T 3uv0_A 76 IGMENAVAGKVKLRFGNVEARL 97 (102)
T ss_dssp ECGGGCBTTEEEEEETTEEEEE
T ss_pred ccCCcccccEEEEEecCEEEEE
Confidence 999999 8888876544
No 54
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.02 E-value=3.6e-10 Score=121.05 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=76.1
Q ss_pred ceEEEEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeecccc---------ccceeEEecCCCC---ceeeEEecc
Q 007933 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEV---------SGKHALINWNPNK---LKWELVDMG 243 (584)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~V---------Sr~Ha~I~~~~~~---~~~~l~Dlg 243 (584)
+...|.++.+... .+.+..+ .++|||.+.||++++|+.| ||+||+|.+..+. ..|+|+| +
T Consensus 9 ~~g~l~~~~~~~~--~~~l~~~-----~~~iGR~~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~ 80 (419)
T 3i6u_A 9 PWARLWALQDGFA--NLECVND-----NYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-H 80 (419)
T ss_dssp CSEEEEECSSSSC--CEEECSS-----EEEEESSTTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-C
T ss_pred CceEeeecCCCCC--ceEecCC-----CEEecCCCccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-C
Confidence 4566777665333 6778777 7999999999999999865 9999999875332 2399999 8
Q ss_pred cccccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 007933 244 SLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (584)
Q Consensus 244 S~NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~ 286 (584)
|+|||||||..+.+ +....|.+|+.+++|.+....
T Consensus 81 S~nGt~vn~~~~~~--------~~~~~l~~~d~i~~~~~~~~~ 115 (419)
T 3i6u_A 81 SGNGTFVNTELVGK--------GKRRPLNNNSEIALSLSRNKV 115 (419)
T ss_dssp CSSCEEETTEECCT--------TCEEECCTTEEEEESSTTCEE
T ss_pred CcCCceECcccccC--------CCcccCCCCCEeeeeccccce
Confidence 99999999999874 445789999999999887543
No 55
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.00 E-value=1.6e-09 Score=93.23 Aligned_cols=91 Identities=16% Similarity=0.226 Sum_probs=72.6
Q ss_pred EEEeecCCCceeeeeeccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccccCCCCC
Q 007933 180 LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPD 259 (584)
Q Consensus 180 L~v~~G~~~g~~~~l~~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~v~~p~ 259 (584)
|.-.+|. ...+.|..+. .++|||++.+.| .|..+||+|++|..+.+++.|.|.|+| +|++|+||.++.+
T Consensus 7 L~~~~~~--~~~I~L~~g~----~v~iGR~p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~k-- 75 (102)
T 3kt9_A 7 LVRQDSR--HQRIRLPHLE----AVVIGRGPETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIGK-- 75 (102)
T ss_dssp EEETTST--TCEEECCBTC----EEEECSSTTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECCB--
T ss_pred EEecCCC--CCcEEcCCCC----cEEeccCCcccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcCC--
Confidence 4444432 3567777663 578999997754 799999999999998765678999997 8999999999885
Q ss_pred CCCCCCCCCcccCCCCeEEecccceEEE
Q 007933 260 SGSRHWGKPMELTSGDIITLGTTSSIHV 287 (584)
Q Consensus 260 ~~~r~~g~~~~L~~Gd~I~lG~ts~~~~ 287 (584)
+..+.|++||+|.+-...+.|.
T Consensus 76 ------~~~~~L~~GD~l~Ll~~~~~~~ 97 (102)
T 3kt9_A 76 ------DQEVKLQPGQVLHMVNELYPYI 97 (102)
T ss_dssp ------TCEEEECTTCCEEEETTEEEEE
T ss_pred ------CCeEEeCCCCEEEEccCCceEE
Confidence 6779999999999877766553
No 56
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.83 E-value=7.2e-09 Score=90.12 Aligned_cols=91 Identities=22% Similarity=0.257 Sum_probs=70.5
Q ss_pred EEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccccC
Q 007933 178 LSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI 255 (584)
Q Consensus 178 ~~L~v~~G~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~v 255 (584)
.+|+-+.|... .+.|. .+ .++|||++ +..|.|..+||+|++|.++..++.+.|.++| +|++++||.++
T Consensus 10 c~L~~~~~~~~--~I~Lp~~~g-----~~viGR~p--~t~I~DkrcSR~hv~L~ad~~~~~v~vk~lG-~Np~~vng~~l 79 (110)
T 2brf_A 10 LWLESPPGEAP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRTQVELVADPETRTVAVKQLG-VNPSTTGTQEL 79 (110)
T ss_dssp EEEECSTTSSC--CEECCSTTC-----CEEECSBT--TTTBCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEEC-CBC
T ss_pred EEEEeCCCCCC--cEEeccCCC-----CEEEcCCC--CcccccccceeeeEEEEEecCCCEEEEEEcc-cCCcEECCEEc
Confidence 44666665433 67774 34 79999999 4468999999999999987776689999996 59999999988
Q ss_pred CCCCCCCCCCCCCcccCCCCeEEe--cccceEE
Q 007933 256 NHPDSGSRHWGKPMELTSGDIITL--GTTSSIH 286 (584)
Q Consensus 256 ~~p~~~~r~~g~~~~L~~Gd~I~l--G~ts~~~ 286 (584)
.+ +..+.|++||.|.+ |...|.+
T Consensus 80 ~k--------~~~~~L~~GD~leLl~g~y~~~v 104 (110)
T 2brf_A 80 KP--------GLEGSLGVGDTLYLVNGLHPLTL 104 (110)
T ss_dssp CT--------TCEEEEETTCEEEEETTEEEEEE
T ss_pred CC--------CCEEEecCCCEEEEccCCeEEEE
Confidence 84 67899999999987 5444433
No 57
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.69 E-value=1.2e-08 Score=101.58 Aligned_cols=71 Identities=14% Similarity=0.054 Sum_probs=60.3
Q ss_pred ceeecCcCCCcceeeccccccceeEEecCC-CC-ceeeEEeccccccc-ccccccCCCCCCCCCCCCCCcccC-CCCeEE
Q 007933 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNP-NK-LKWELVDMGSLNGT-LLNSQPINHPDSGSRHWGKPMELT-SGDIIT 278 (584)
Q Consensus 203 ~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~-~~-~~~~l~DlgS~NGT-~vng~~v~~p~~~~r~~g~~~~L~-~Gd~I~ 278 (584)
.++|||.+.|||+|++. + ||.+.... +. +.|+|+|++|+||| ||||+++.. +..|+ .||.|.
T Consensus 93 ~itIG~~~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~----------~~~L~~~GD~I~ 158 (238)
T 1wv3_A 93 TMTIGPNAYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ----------LTNKAYIGDHIY 158 (238)
T ss_dssp EEEEESSTTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS----------SEEEEETTCEEE
T ss_pred eEEEeCCCCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc----------ceeccCCcCEEE
Confidence 79999999999999988 3 58777761 10 27999999999997 999999985 37899 999999
Q ss_pred ecccceEEE
Q 007933 279 LGTTSSIHV 287 (584)
Q Consensus 279 lG~ts~~~~ 287 (584)
+|...+.+.
T Consensus 159 ig~~~~~~~ 167 (238)
T 1wv3_A 159 VEGIWLEVQ 167 (238)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEEE
Confidence 999988773
No 58
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.65 E-value=4.5e-08 Score=93.46 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=69.9
Q ss_pred EEEEEe-ecCC-Cc-eeeeeeccCCCCcceeecCcC---CCcceeeccccccceeEEecCCCC---ceeeEEeccccccc
Q 007933 178 LSLEVV-SGPS-RG-IRCSVQSANASRLPLTLGRVS---PSDVLLKDSEVSGKHALINWNPNK---LKWELVDMGSLNGT 248 (584)
Q Consensus 178 ~~L~v~-~G~~-~g-~~~~l~~~~~~~~~~~iGR~~---~~di~i~d~~VSr~Ha~I~~~~~~---~~~~l~DlgS~NGT 248 (584)
.+|.-+ ..|. .+ ..|.|..+ ..+|||.. .+||+|.++.|+++||.|..+.++ +.+.|.+. +.+.|
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~~g-----~t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIKDG-----ITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECCSE-----EEEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred ceEEeccCCcccCceEEEEECCC-----cCcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 345554 3443 23 35668777 78999964 689999999999999999986542 24667765 56789
Q ss_pred ccccccCCCCCCCCCCCCCCcccCCCCeEEecccce
Q 007933 249 LLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSS 284 (584)
Q Consensus 249 ~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~ 284 (584)
||||.+|.. ++.|++||+|.+|.+.+
T Consensus 143 ~VNG~~I~~----------~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 143 YVNGKKVTE----------PSILRSGNRIIMGKSHV 168 (184)
T ss_dssp EETTEECCS----------CEECCTTCEEEETTTEE
T ss_pred EEcCEEccc----------cEEcCCCCEEEECCCCE
Confidence 999999985 49999999999998854
No 59
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.65 E-value=3.6e-08 Score=86.79 Aligned_cols=93 Identities=19% Similarity=0.229 Sum_probs=72.7
Q ss_pred ceEEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEecccccccccccc
Q 007933 176 SCLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQ 253 (584)
Q Consensus 176 ~~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~ 253 (584)
...+|+-+.+... .+.|. .+ .++|||++ +..|.|..+||+|+++.++..++.+.|.++| +|++++||.
T Consensus 15 ~~c~L~~~~~~~~--~I~Lp~~~g-----~~viGRgp--~t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vng~ 84 (119)
T 1ujx_A 15 GRLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGVQ 84 (119)
T ss_dssp CCEEEECCSSSCC--CCCCCTTSC-----CEEESBBT--TTTBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSSSS
T ss_pred ceEEEEeCCCCCC--cEEeccCCC-----CEEEcCCC--CcccccccccceeEEEEEecCCCEEEEEEcc-cCCcEECCE
Confidence 3456777766533 56664 34 79999999 4568999999999999987776789999997 599999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCeEE--ecccceEE
Q 007933 254 PINHPDSGSRHWGKPMELTSGDIIT--LGTTSSIH 286 (584)
Q Consensus 254 ~v~~p~~~~r~~g~~~~L~~Gd~I~--lG~ts~~~ 286 (584)
++.+ +..+.|++||.|. .|...|.+
T Consensus 85 ~l~k--------~~~~~L~~GD~l~Ll~g~y~~~v 111 (119)
T 1ujx_A 85 ELKP--------GLSGSLSLGDVLYLVNGLYPLTL 111 (119)
T ss_dssp BCCT--------TCEEEEETTCCCBCBTTBSCCEE
T ss_pred EecC--------CCEEEecCCCEEEEecCCeEEEE
Confidence 8885 6779999999987 45554444
No 60
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.64 E-value=5.2e-07 Score=96.24 Aligned_cols=194 Identities=11% Similarity=0.039 Sum_probs=105.6
Q ss_pred ccceeeccCCCCCCccceeeeecCCCcchhhhhhhhhhHHHHHHHhhhhhhhhhhhccCChhHHHHHHhhhhhhhhhccc
Q 007933 320 EDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHY 399 (584)
Q Consensus 320 ED~~~v~~~~~~~~~~~lfgVfDGhGG~~aa~~as~~l~~~l~~~l~~~~~~e~~~~~~~~~~~L~~af~~~d~~i~~~~ 399 (584)
=|.|-+.. .++..+++|+|+.|..-.|.+++..+...+..+.... .++.++|... +..+....
T Consensus 53 GD~y~~~~----~~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~---------~~p~~il~~l----n~~~~~~~ 115 (399)
T 3ke6_A 53 GDWFDALA----LGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAG---------YTVVEALEAV----DRFHKQVP 115 (399)
T ss_dssp SEEEEEEE----CSSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTT---------CCHHHHHHHH----HHHGGGST
T ss_pred CceEEEEE----ECCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcC---------CCHHHHHHHH----HHHHHhcC
Confidence 37765542 1236688999998844444455555555555543321 1233333322 22122222
Q ss_pred ccccEEEEEEEecC-CcchhhcccccCCceeEEee-cCceeeecccccccchhhhhhhhhcCCcCCCCCeeeecchhhhh
Q 007933 400 EGCTATVLLVWADG-NANIFAQCANVGDSACVMNV-DGKQIKMSEDHRIASYSERLRIQETGEPLKDGETRLCGLNLARM 477 (584)
Q Consensus 400 ~GsTatvvli~~~~-~~~~~l~vaNVGDSRa~l~r-~g~~~qLT~DH~~~~~~E~~RI~~~Gg~i~~g~~Rv~GLalsRs 477 (584)
.+..+|++++..+. ++. +.++|+|..+.|+++ +|+...+..++.+ .
T Consensus 116 ~~~~~t~~~~~id~~~~~--l~~~~aGh~~~~l~~~~g~~~~l~~~~~~------------------------------p 163 (399)
T 3ke6_A 116 GSKSATMCVGSLDFTSGE--FQYCTAGHPPPLLVTADASARYVEPTGAG------------------------------P 163 (399)
T ss_dssp TCTTCEEEEEEEETTTCE--EEEEEESSCCCEEECTTSCEEECCCCSCC------------------------------C
T ss_pred CCcEEEEEEEEEECCCCE--EEEECCCCChhEEEeCCCCEEEeecCCCc------------------------------c
Confidence 33333444433332 222 568999999999998 7777777654321 0
Q ss_pred hhhhhhhccccccCCCCCccceeeecccccceeeeccCCcceeccH------HHHHHHHHHHhhhhc----ccccchHHH
Q 007933 478 LGDKFLKQQDARFSAEPYISPVVHIDQASKAFALLASDGFWDVISV------KKAIQLVVQMREKYS----ADKENSTEK 547 (584)
Q Consensus 478 lGD~~~K~~~~~vs~eP~I~~~~~i~~~~ddflVLaSDGLwD~ls~------~ei~~lv~~~~~~~~----~~~~~~~~~ 547 (584)
+|- .+.+. ...+....++.|+|+||||.|.... +.+.+++.+...... .......+.
T Consensus 164 lG~------------~~~~~-~~~~~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T 3ke6_A 164 LGS------------GTGFP-VRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDR 230 (399)
T ss_dssp TTS------------SCCCC-CEEEECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHH
T ss_pred eEC------------CCCce-eEEEEECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHH
Confidence 120 01111 1234455789999999999998765 445555543211100 011234555
Q ss_pred HHHHHhhhhhh-ccccCCceEEEEecCCc
Q 007933 548 IANVLLSEART-LRTKDNTSIIFLDFDST 575 (584)
Q Consensus 548 ~A~~Lv~~A~~-~gs~DNiTvIVv~~~~~ 575 (584)
+++.+++.... .+..||+||+++++...
T Consensus 231 l~~~~~~~~~~~~~~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 231 LCSDTLELLLRSTGYNDDVTLLAMQRRAP 259 (399)
T ss_dssp HHHHHHHHHHHTTCCSSCEEEEEEEECCC
T ss_pred HHHHHHHHhccCCCCCCceEEEEEEeeCC
Confidence 66666554433 45789999999999864
No 61
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.62 E-value=8.1e-08 Score=86.54 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=73.3
Q ss_pred eEEEEEeecCCCceeeeee--ccCCCCcceeecCcCCCcceeeccccccceeEEecCCCCceeeEEeccccccccccccc
Q 007933 177 CLSLEVVSGPSRGIRCSVQ--SANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQP 254 (584)
Q Consensus 177 ~~~L~v~~G~~~g~~~~l~--~~~~~~~~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l~DlgS~NGT~vng~~ 254 (584)
..+|+-+.|... .+.|. .+ .++|||++ +..|.|..+||+|++|.++..++.+.|.++| +|+++|||..
T Consensus 9 ~c~L~p~d~~~~--~I~Lp~~~g-----~vvIGRgP--et~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~vng~~ 78 (143)
T 1yj5_C 9 RLWLQSPTGGPP--PIFLPSDGQ-----ALVLGRGP--LTQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVGVHE 78 (143)
T ss_dssp EEEEECCTTSCC--CEECCTTTC-----EEEECSBT--TTTBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEE
T ss_pred eEEEEecCCCCC--cEEeccCCC-----CEEEcCCC--ccccccccccceeEEEEEecCCCeEEEEEcc-cCCcEECCEE
Confidence 345666666433 67774 34 79999999 5579999999999999987776688999996 5999999999
Q ss_pred CCCCCCCCCCCCCCcccCCCCeEE--ecccceEEE
Q 007933 255 INHPDSGSRHWGKPMELTSGDIIT--LGTTSSIHV 287 (584)
Q Consensus 255 v~~p~~~~r~~g~~~~L~~Gd~I~--lG~ts~~~~ 287 (584)
+.+ +..+.|.+||.|. .|...|.++
T Consensus 79 L~k--------~~~~~L~~GD~LeLl~g~y~f~V~ 105 (143)
T 1yj5_C 79 LKP--------GLSGSLSLGDVLYLVNGLYPLTLR 105 (143)
T ss_dssp CCT--------TCEEEECTTCEEESSSSCSEEEEE
T ss_pred ecC--------CCEEEecCCCEEEEecCCceEEEE
Confidence 885 6779999999998 455555543
No 62
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=97.71 E-value=0.00015 Score=76.40 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=34.4
Q ss_pred eecccccceeeeccCCcceeccH-------HHHHHHHHHHhhhhcccccchHHHHHHHHhhhhhhccccCCceEEEEecC
Q 007933 501 HIDQASKAFALLASDGFWDVISV-------KKAIQLVVQMREKYSADKENSTEKIANVLLSEARTLRTKDNTSIIFLDFD 573 (584)
Q Consensus 501 ~i~~~~ddflVLaSDGLwD~ls~-------~ei~~lv~~~~~~~~~~~~~~~~~~A~~Lv~~A~~~gs~DNiTvIVv~~~ 573 (584)
.+...+++.|+|.||||.|.... +.+.+++... ...++.+++.+.. .......||+|+++++.+
T Consensus 322 ~~~l~~gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~--------~~~~~~l~~~~~~-~~~~~~~DDit~l~i~~~ 392 (394)
T 3eq2_A 322 VMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------GGTLDGLRQVFGL-ANLAEMPDDIALLVLSRN 392 (394)
T ss_dssp EEECCSSCEEEECSSCCCC-----CCSTTTTTSHHHHHTT--------C--CHHHHHHHSC-CCSCC--CCCEEEEEC--
T ss_pred EEEeCCCCEEEEECCCcccccCcccchhhHHHHHHHHHhc--------chhHHHHHHHhcc-cCCCCCCCceEEEEEecc
Confidence 34555799999999999998543 3344444321 2234444444432 222335699999999875
Q ss_pred C
Q 007933 574 S 574 (584)
Q Consensus 574 ~ 574 (584)
.
T Consensus 393 ~ 393 (394)
T 3eq2_A 393 L 393 (394)
T ss_dssp -
T ss_pred c
Confidence 4
No 63
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=30.13 E-value=44 Score=32.27 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.4
Q ss_pred ceeecCcCCCcceeeccccccceeEEecCCCCceeeE
Q 007933 203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWEL 239 (584)
Q Consensus 203 ~~~iGR~~~~di~i~d~~VSr~Ha~I~~~~~~~~~~l 239 (584)
.++||+...|+|.|++. ..|++|.++++ +.|.+
T Consensus 22 ~~tiG~~~~~~itl~~~---~~~i~l~~~~~-~~~~v 54 (238)
T 1wv3_A 22 TYTISEDERADITLKSL---GEVIHLEQNNQ-GTWQA 54 (238)
T ss_dssp CEEEESCTTSSEECTTC---CCCEEEEECTT-SCEEE
T ss_pred EEEECCCccceEEecCC---CccEEEEEccC-CeEEE
Confidence 79999999999999876 78999999773 37887
No 64
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=30.84 E-value=15 Score=25.29 Aligned_cols=20 Identities=35% Similarity=0.632 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 007933 10 FTVLLMLILILLFIFIACKP 29 (584)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ 29 (584)
++.++++.||++++.+--||
T Consensus 17 l~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKP 36 (39)
Confidence 34444444444444444444
No 65
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=24.29 E-value=45 Score=26.13 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=23.3
Q ss_pred cccccccccCCCCCCCCCCCCCCcccCCCCeEEecccceEE
Q 007933 246 NGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIH 286 (584)
Q Consensus 246 NGT~vng~~v~~p~~~~r~~g~~~~L~~Gd~I~lG~ts~~~ 286 (584)
+..+|||+.+..| ...+.+||.|+++...+.+
T Consensus 46 G~V~VNG~~v~~~---------~~~v~~gd~I~v~~~~~~~ 77 (79)
T 1p9k_A 46 GQVKVDGAVETRK---------RCKIVAGQTVSFAGHSVQV 77 (79)
T ss_dssp HHHEETTBCCCCS---------SCCCCSSEEEEETTEEEEE
T ss_pred CEEEECCEEecCC---------CCCCCCCCEEEECCEEEEE
Confidence 4567889887653 2668899999998876543
No 66
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.97 E-value=86 Score=21.40 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=5.1
Q ss_pred HHHHHHHHHhhc
Q 007933 17 ILILLFIFIACK 28 (584)
Q Consensus 17 ~~~~~~~~~~~~ 28 (584)
+++.++++|.+|
T Consensus 25 ~li~~l~~~~~r 36 (38)
T 2k1k_A 25 ALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHee
Confidence 334444444443
Done!