BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007935
(584 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLS 170
N ++++LD+++N G IP I ++ L P+ + DLR L L+LS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLS 685
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP 230
N+ G+IP+ ++ +DL NNNLSG IP++G P F NPGLCG+PL P
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--P 743
Query: 231 CPEPENPKVHANPEVEDG 248
+P N +A+ + G
Sbjct: 744 RCDPSNADGYAHHQRSHG 761
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDL 160
F+ IP L N + LV L L+ N G IP + +L L P+ L+ +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VG-----SLLNQGPT 214
+ L TL L FN +G+IP + + + L NN L+GEIP+ +G ++L
Sbjct: 463 KTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 215 AFSGN 219
+FSGN
Sbjct: 522 SFSGN 526
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 101 FSKPIPANLFN-ATNLVYLDLAHNSFCGPI-PDRIKTLKN-LTHXXXXXXXXXXXXPEFL 157
FS +P +L N + +L+ LDL+ N+F GPI P+ + KN L P L
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 158 LDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
+ L +L+LSFN SG IP G + L L N L GEIPQ
Sbjct: 412 SNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 64 RNRVTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHN 123
+N + LYL N TG +P S IP++L + + L L L N
Sbjct: 390 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 449
Query: 124 SFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
G IP + +K L P L + L ++LS N+ +G+IP+ G
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIG 508
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
+ L L NN+ SG IP
Sbjct: 509 RLENLAILKLSNNSFSGNIP 528
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALT 164
IP+ L N TNL ++ L++N G IP I L+NL
Sbjct: 479 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL------------------------- 513
Query: 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L LS N FSG IP G ++ LDL N +G IP
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 30/129 (23%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK-TLKNLTHXXXXXXXXXXXXPEF--- 156
F PIP +L YL LA N F G IPD + LT P F
Sbjct: 256 FVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 313
Query: 157 ----------------------LLDLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDL 193
LL +R L L+LSFN+FSG++PE + +++LDL
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDL 372
Query: 194 RNNNLSGEI 202
+NN SG I
Sbjct: 373 SSNNFSGPI 381
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD- 159
FS+ I T L L+++ N F GPIP LK+L + P+FL
Sbjct: 236 FSRAIST----CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
LTG L+LS N F G +P +G ++ SL L +NN SGE+P
Sbjct: 290 CDTLTG-LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 70 LYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
+ L N LTG +P FS IPA L + +L++LDL N F G I
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 130 P 130
P
Sbjct: 552 P 552
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLS 170
N ++++LD+++N G IP I ++ L P+ + DLR L L+LS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLS 688
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP 230
N+ G+IP+ ++ +DL NNNLSG IP++G P F NPGLCG+PL P
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--P 746
Query: 231 CPEPENPKVHA 241
+P N +A
Sbjct: 747 RCDPSNADGYA 757
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDL 160
F+ IP L N + LV L L+ N G IP + +L L P+ L+ +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VG-----SLLNQGPT 214
+ L TL L FN +G+IP + + + L NN L+GEIP+ +G ++L
Sbjct: 466 KTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 215 AFSGN 219
+FSGN
Sbjct: 525 SFSGN 529
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 101 FSKPIPANLFN-ATNLVYLDLAHNSFCGPI-PDRIKTLKN-LTHXXXXXXXXXXXXPEFL 157
FS +P +L N + +L+ LDL+ N+F GPI P+ + KN L P L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 158 LDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
+ L +L+LSFN SG IP G + L L N L GEIPQ
Sbjct: 415 SNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 64 RNRVTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHN 123
+N + LYL N TG +P S IP++L + + L L L N
Sbjct: 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 124 SFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
G IP + +K L P L + L ++LS N+ +G+IP+ G
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIG 511
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
+ L L NN+ SG IP
Sbjct: 512 RLENLAILKLSNNSFSGNIP 531
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALT 164
IP+ L N TNL ++ L++N G IP I L+NL
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL------------------------- 516
Query: 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L LS N FSG IP G ++ LDL N +G IP
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 30/129 (23%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK-TLKNLTHXXXXXXXXXXXXPEF--- 156
F PIP +L YL LA N F G IPD + LT P F
Sbjct: 259 FVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316
Query: 157 ----------------------LLDLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDL 193
LL +R L L+LSFN+FSG++PE + +++LDL
Sbjct: 317 CSLLESLALSSNNFSGELPMDTLLKMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDL 375
Query: 194 RNNNLSGEI 202
+NN SG I
Sbjct: 376 SSNNFSGPI 384
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 112 ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD-LRALTGTLNLS 170
T L L+++ N F GPIP LK+L + P+FL LTG L+LS
Sbjct: 246 CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTG-LDLS 302
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
N F G +P +G ++ SL L +NN SGE+P
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 70 LYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
+ L N LTG +P FS IPA L + +L++LDL N F G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 130 P 130
P
Sbjct: 555 P 555
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 74/246 (30%)
Query: 385 ATWRFKD--------------FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A WR KD F E+ ++RV HPNIV+L + + L+ ++ G
Sbjct: 28 AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGG 85
Query: 431 SLYAALHG----------FGLNRLLPGTSKVT-----------------KNETIVTSGTG 463
SLY LHG ++ L + V N +V GT
Sbjct: 86 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 145
Query: 464 SRISAI---------------SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 508
+I S ++APE GS +++KCDV+S+GI+L E++T R P
Sbjct: 146 LKICDFGTACDIQTHMTNNKGSAAWMAPEV-FEGSNYSEKCDVFSWGIILWEVITRRKP- 203
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
+ + AFR + P L+K + + L T C DP R
Sbjct: 204 ---------FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT-----RCWSKDPSQR 249
Query: 569 PRMRTV 574
P M +
Sbjct: 250 PSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 74/246 (30%)
Query: 385 ATWRFKD--------------FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A WR KD F E+ ++RV HPNIV+L + + L+ ++ G
Sbjct: 27 AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGG 84
Query: 431 SLYAALHG----------FGLNRLLPGTSKVT-----------------KNETIVTSGTG 463
SLY LHG ++ L + V N +V GT
Sbjct: 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144
Query: 464 SRISAI---------------SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 508
+I S ++APE GS +++KCDV+S+GI+L E++T R P
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSAAWMAPEV-FEGSNYSEKCDVFSWGIILWEVITRRKP- 202
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
+ + AFR + P L+K + + L T C DP R
Sbjct: 203 ---------FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT-----RCWSKDPSQR 248
Query: 569 PRMRTV 574
P M +
Sbjct: 249 PSMEEI 254
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 60/279 (21%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK V T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 39 MGEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHGF--------------------GLNRLLP 446
+V L F D+ L+ ++ NGSL L G+N L
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 447 G------------------TSKVTK------NETIVTSGTGSRISAISNVYLAPEARIYG 482
T+K++ +E + SRI + Y+APEA
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG-TTAYMAPEA--LR 208
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
+ T K D+YSFG+VLLEI+TG LP + + L + + E + + + ID +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 267
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
V A + +A C RP ++ V + L +
Sbjct: 268 A--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 121/306 (39%), Gaps = 71/306 (23%)
Query: 318 TDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VA 376
T EE G+ G+ F+ E+E ++G +G +V GR G V VA
Sbjct: 31 TYEEPGRAGR------SFTREIEASRIHIEKIIGSGDSG---EVCYGRLRVPGQRDVPVA 81
Query: 377 VRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS----- 431
++ L G + +DF SE + + HPNI+RL+ +++++++ NGS
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Query: 432 -----------LYAALHGFGLN-RLLPGTSKVTKN----ETIVTSGTGSRIS--AISNV- 472
L L G G R L V ++ +V S ++S +S V
Sbjct: 142 RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 473 ------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 513
+ APEA I F+ DV+SFG+V+ E+L G P N
Sbjct: 202 EDDPDAAXTTTGGKIPIRWTAPEA-IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 514 DGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573
+ + S V + +R PA + HA Q++ L+C D RPR
Sbjct: 261 --RDVISSVEEGYRL---------PAPMGCPHALHQLM------LDCWHKDRAQRPRFSQ 303
Query: 574 VSESLD 579
+ LD
Sbjct: 304 IVSVLD 309
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 121/306 (39%), Gaps = 71/306 (23%)
Query: 318 TDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VA 376
T EE G+ G+ F+ E+E ++G +G +V GR G V VA
Sbjct: 31 TYEEPGRAGR------SFTREIEASRIHIEKIIGSGDSG---EVCYGRLRVPGQRDVPVA 81
Query: 377 VRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS----- 431
++ L G + +DF SE + + HPNI+RL+ +++++++ NGS
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Query: 432 -----------LYAALHGFGLN-RLLPGTSKVTKN----ETIVTSGTGSRIS--AISNV- 472
L L G G R L V ++ +V S ++S +S V
Sbjct: 142 RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 473 ------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 513
+ APEA I F+ DV+SFG+V+ E+L G P N
Sbjct: 202 EDDPDAAYTTTGGKIPIRWTAPEA-IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 514 DGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573
+ + S V + +R PA + HA Q++ L+C D RPR
Sbjct: 261 --RDVISSVEEGYRL---------PAPMGCPHALHQLM------LDCWHKDRAQRPRFSQ 303
Query: 574 VSESLD 579
+ LD
Sbjct: 304 IVSVLD 309
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 60/279 (21%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK V T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 39 MGEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHGF--------------------GLNRLLP 446
+V L F D+ L+ ++ NGSL L G+N L
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 447 G------------------TSKVTK------NETIVTSGTGSRISAISNVYLAPEARIYG 482
T+K++ +E + RI + Y+APEA
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG-TTAYMAPEA--LR 208
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
+ T K D+YSFG+VLLEI+TG LP + + L + + E + + + ID +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 267
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
V A + +A C RP ++ V + L +
Sbjct: 268 A--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNVYLA- 475
+ + G+ R + K + V +R + +S+ LA
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLAR 195
Query: 476 -----------------------PEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 63/252 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF SE + + HPN++ L+ + ++I++F+ NGSL
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 433 --------YAALHGFGLNRLLP----------------------------------GTSK 450
+ + G+ R + G S+
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
Query: 451 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDA 509
+++T + T + I + APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 184 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYW 242
Query: 510 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
N + + + + + +R P+ P+ A + L+C + D RP
Sbjct: 243 DMTN--QDVINAIEQDYRLPPPMDC---PS------------ALHQLMLDCWQKDRNHRP 285
Query: 570 RMRTVSESLDRV 581
+ + +LD++
Sbjct: 286 KFGQIVNTLDKM 297
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 63/252 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF SE + + HPN++ L+ + ++I++F+ NGSL
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSR 157
Query: 473 ----------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDA 509
+ APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 158 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYW 216
Query: 510 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 569
N + + + + + +R P+ P+ A + L+C + D RP
Sbjct: 217 DMTN--QDVINAIEQDYRLPPPMD---CPS------------ALHQLMLDCWQKDRNHRP 259
Query: 570 RMRTVSESLDRV 581
+ + +LD++
Sbjct: 260 KFGQIVNTLDKM 271
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 111/279 (39%), Gaps = 60/279 (21%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK G T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 33 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 85
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHGF--------------------GLNRLLP 446
+V L F D+ L+ ++ NGSL L G+N L
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 447 G------------------TSKVTK------NETIVTSGTGSRISAISNVYLAPEARIYG 482
T+K++ +E RI + Y+APEA
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG-TTAYMAPEA--LR 202
Query: 483 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542
+ T K D+YSFG+VLLEI+TG LP + + L + + E + + + ID +
Sbjct: 203 GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 261
Query: 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
V A + +A C RP ++ V + L +
Sbjct: 262 A--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 104 PIPANLFNATNLVYLDLAH----NSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD 159
PIP++L NL YL+ + N+ GPIP I L L + P+FL
Sbjct: 67 PIPSSL---ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
++ L TL+ S+N SG +P P +V + N +SG IP
Sbjct: 124 IKTLV-TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 104 PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRAL 163
PIP + T L YL + H + G IPD + +K L P + L L
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 164 TGTLNLSFNQFSGQIPEMYGHFP-VMVSLDLRNNNLSGEIPQVGSLLN 210
G + N+ SG IP+ YG F + S+ + N L+G+IP + LN
Sbjct: 152 VG-ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFP 226
L+L N+ G +P+ + SL++ NNL GEIPQ G+L +A++ N LCG P
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
Query: 227 L 227
L
Sbjct: 309 L 309
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 54/154 (35%), Gaps = 23/154 (14%)
Query: 76 NLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT 135
NL G +P S IP L LV LD ++N+ G +P I +
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 136 LKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMY------------- 182
L NL P+ L ++ +S N+ +G+IP +
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRN 207
Query: 183 ---GHFPVMVSLD-------LRNNNLSGEIPQVG 206
G V+ D L N+L+ ++ +VG
Sbjct: 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 134 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 194 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 252
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 253 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 294
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 295 FEQIVSILDKL 305
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 44/211 (20%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES 394
F+ E+ V+G + G +YK ++ SG VA++ L G + DF
Sbjct: 37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLG 95
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL----------YAALHGFGLNRL 444
E + + H NI+RL+ ++I++++ NG+L ++ L G+ R
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 445 LPGTSKVTKNETIVTSGTGSR--------ISAISNV------------------------ 472
+ K N V +R + +S+
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503
+ APEA Y KFT DV+SFGIV+ E++T
Sbjct: 216 WTAPEAISY-RKFTSASDVWSFGIVMWEVMT 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 124 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 184 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 242
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 243 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 284
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 285 FEQIVSILDKL 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 226 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 267
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 268 FEQIVSILDKL 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +F+ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGS 102
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 103 LREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 61/250 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 435 ----------------ALHGFGLN-RLLPGTSKVTKN----ETIVTSGTGSRIS--AISN 471
L G G + L S V ++ +V S ++S +S
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 472 V-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
V + APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 512 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 571
N V KA E L +D +A + L+C + + RP+
Sbjct: 239 SNQD------VIKAIEEGYRLPPPMDCP-----------IALHQLMLDCWQKERSDRPKF 281
Query: 572 RTVSESLDRV 581
+ LD++
Sbjct: 282 GQIVNMLDKL 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 103 LRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 61/250 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 435 ----------------ALHGFGLN-RLLPGTSKVTKN----ETIVTSGTGSRIS--AISN 471
L G G + L S V ++ +V S ++S +S
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 472 V-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
V + APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
Query: 512 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 571
N V KA E L +D +A + L+C + + RP+
Sbjct: 218 SNQD------VIKAIEEGYRLPPPMDCP-----------IALHQLMLDCWQKERSDRPKF 260
Query: 572 RTVSESLDRV 581
+ LD++
Sbjct: 261 GQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 61/250 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 435 ----------------ALHGFGLN-RLLPGTSKVTKN----ETIVTSGTGSRIS--AISN 471
L G G + L S V ++ +V S ++S +S
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 472 V-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
V + APEA Y KFT DV+S+GIV+ E+++ G P
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
Query: 512 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 571
N V KA E L +D +A + L+C + + RP+
Sbjct: 224 SNQD------VIKAIEEGYRLPPPMDCP-----------IALHQLMLDCWQKERSDRPKF 266
Query: 572 RTVSESLDRV 581
+ LD++
Sbjct: 267 GQIVNMLDKL 276
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 391 DFESEV-EAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTS 449
DF +++ E +A ++ N + L ++ + + SL + FGL R+
Sbjct: 115 DFSAQIAEGMAFIEQRNYIH---------RDLRAANILVSASLVCKIADFGLARV----- 160
Query: 450 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPD 508
+ NE G I + APEA +GS FT K DV+SFGI+L+EI+T GR+P
Sbjct: 161 -IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPY 213
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
G N + + +L R +R RP + +E+ ++I + C + PE R
Sbjct: 214 PGMSNP-EVIRALER-GYRMPRPEN------CPEEL---------YNIMMRCWKNRPEER 256
Query: 569 PRMRTVSESLD 579
P + LD
Sbjct: 257 PTFEYIQSVLD 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 40/191 (20%)
Query: 391 DFESEV-EAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTS 449
DF +++ E +A ++ N + L ++ + + SL + FGL R+
Sbjct: 288 DFSAQIAEGMAFIEQRNYIH---------RDLRAANILVSASLVCKIADFGLARV----- 333
Query: 450 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPD 508
+ NE G I + APEA +GS FT K DV+SFGI+L+EI+T GR+P
Sbjct: 334 -IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPY 386
Query: 509 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR 568
G N + + +L R +R RP E L ++I + C + PE R
Sbjct: 387 PGMSNP-EVIRALER-GYRMPRP--ENCPEEL-------------YNIMMRCWKNRPEER 429
Query: 569 PRMRTVSESLD 579
P + LD
Sbjct: 430 PTFEYIQSVLD 440
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 255 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 296
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 297 FEQIVSILDKL 307
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 103 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 59 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 39 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 97
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 98 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 157
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 40 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 98
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 99 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 158
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 47 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 105
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 106 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 165
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 46 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 104
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 105 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 164
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 45 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 103
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 104 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 163
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 59 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 48 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 106
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 107 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 166
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ +PEA Y KFT DV+S+GIVL E+++ G P
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + D RP+
Sbjct: 226 SNQD------VIKAVDEGYRLPPPMDCPA------------ALYQLMLDCWQKDRNNRPK 267
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 268 FEQIVSILDKL 278
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 80/291 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ G +YK + G T+VAV+RL E F++EVE I+ H N++
Sbjct: 45 ILGRGGFGKVYKGRLADG------TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 409 RLKAF------------YYAN--------------------------------------- 417
RL+ F Y AN
Sbjct: 99 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 158
Query: 418 -DEKLLISD-----FIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 471
D K++ D + + A + FGL +L+ K+ + + G+ I I+
Sbjct: 159 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDXHVXXAVRGT-IGHIAP 212
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAG--PENDGKGLESLVRKAFRE 528
YL+ K ++K DV+ +G++LLE++TG R D +D L V+ +E
Sbjct: 213 EYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 529 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
++ L ++D L + + +V +AL CT+ P RP+M V L+
Sbjct: 267 KK-LEALVDVDL-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 72 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 130
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 131 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 81/286 (28%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G + G +V GR G + VA++ L G + ++F SE + + +HPNI
Sbjct: 21 VIGAGEFG---EVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALH------------------------------ 437
+RL+ + +++++F+ NG+L + L
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 438 ---------------------GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
FGL+R L S ++ TS G +I + AP
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENS----SDPTYTSSLGGKIPI---RWTAP 190
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
EA I KFT D +S+GIV+ E+++ G P N + + + + + +R P
Sbjct: 191 EA-IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN--QDVINAIEQDYRLPPP---- 243
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P +H + L+C + D RPR V +LD++
Sbjct: 244 --PDCPTSLH---------QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 42 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 100
Query: 432 L--YAALHGFGLN--RLLPGTSKVTKN-ETIVTSGTGSRISAISNVYLAPEARI----YG 482
L Y H ++ +LL TS++ K E + T R A N+ + E R+ +G
Sbjct: 101 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFG 160
Query: 483 --------------------------------SKFTQKCDVYSFGIVLLEILT 503
SKF+ DV+SFG+VL E+ T
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 113/290 (38%), Gaps = 90/290 (31%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R S ++ + NG +V +G +G T VA++ L G T + F E + + +++
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWNG---NTKVAIKTLKPG--TMSPESFLEEAQIMKKLK 62
Query: 404 HPNIVRLKAFY----------YANDEKLLISDFIRNGS---------------------- 431
H +V+L A Y N LL DF+++G
Sbjct: 63 HDKLVQLYAVVSEEPIYIVTEYMNKGSLL--DFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 432 ---------------------LYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 470
L + FGL RL + NE G I
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARL------IEDNEXTARQGAKFPIK--- 171
Query: 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529
+ APEA +YG +FT K DV+SFGI+L E++T GR+P G N+ + LE V + +R
Sbjct: 172 --WTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPG-MNNREVLEQ-VERGYRMP 226
Query: 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
P + ++ + ++C + DPE RP + L+
Sbjct: 227 CP---------------QDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 77/261 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
+ VA++ L G + ++F SE + + +HPNI+RL+ + +++++F+ NG+L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 433 YAALH---------------------------------------------------GFGL 441
+ L FGL
Sbjct: 105 DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL 164
Query: 442 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
+R L S ++ TS G +I + APEA I KFT D +S+GIV+ E+
Sbjct: 165 SRFLEENS----SDPTETSSLGGKIPI---RWTAPEA-IAFRKFTSASDAWSYGIVMWEV 216
Query: 502 LT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNC 560
++ G P N + + + + + +R P P +H + L+C
Sbjct: 217 MSFGERPYWDMSN--QDVINAIEQDYRLPPP------PDCPTSLH---------QLMLDC 259
Query: 561 TELDPEFRPRMRTVSESLDRV 581
+ D RPR V +LD++
Sbjct: 260 WQKDRNARPRFPQVVSALDKM 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 112/292 (38%), Gaps = 81/292 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK G KV R +G V+ ++ L D + + F EV+ + ++HPN++
Sbjct: 17 VLGKGCFGQAIKVT-HRETG----EVMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPNVL 70
Query: 409 RLKAFYYANDEKLLISDFIRNGSL--------------------------YAALHGFGL- 441
+ Y + I+++I+ G+L A LH +
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 442 -NRLLPGTSKVTKNETIVTSGTG------------------------SRISAISNVY-LA 475
L V +N+ +V + G R + + N Y +A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 476 PEARIYGSKFTQKCDVYSFGIVLLEILTGRL---PDAGPENDGKGLESLVRKAFRERRPL 532
PE I G + +K DV+SFGIVL EI+ GR+ PD P GL + F +R
Sbjct: 191 PEM-INGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNV---RGFLDRY-C 244
Query: 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
P+ F I + C +LDPE RP + L+ +++
Sbjct: 245 PPNCPPSF-------------FPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 53/239 (22%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ + G + + F +E + +QH +V+L A + +I++F+ GSL
Sbjct: 207 TKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSL 263
Query: 433 YAALHGFG-----LNRLLPGTSKVTKNETIVTSG--------------TGSRISAISNV- 472
L L +L+ ++++ + + + S + I++
Sbjct: 264 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG 323
Query: 473 -----------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520
+ APEA +GS FT K DV+SFGI+L+EI+T GR+P G N + + +
Sbjct: 324 LARVGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRA 381
Query: 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
L R +R RP E L ++I + C + PE RP + LD
Sbjct: 382 LER-GYRMPRP--ENCPEEL-------------YNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 47 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 103
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 104 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 163
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 164 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 222
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 223 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 259
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 44 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 100
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 160
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 161 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 219
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 220 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 46 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 102
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 103 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 162
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 163 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 221
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 222 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 48 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 104
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 105 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 164
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 165 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 223
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 224 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 260
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPNI 407
G+ G++YK G T VAV++L D T + F+ E++ A+ QH N+
Sbjct: 31 GEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENL 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHGF--------------------GLNRLLPG 447
V L F D+ L+ + NGSL L G+N L
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 448 ------------------TSKVTK------NETIVTSGTGSRISAISNVYLAPEARIYGS 483
T+K++ +E SRI + Y APEA
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG-TTAYXAPEA--LRG 200
Query: 484 KFTQKCDVYSFGIVLLEILTG 504
+ T K D+YSFG+VLLEI+TG
Sbjct: 201 EITPKSDIYSFGVVLLEIITG 221
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 154
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 155 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 44 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 100
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 160
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 161 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 219
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 220 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 40 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 96
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 97 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 156
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 157 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 215
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 216 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 252
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 39 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 95
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 96 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 155
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 156 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 214
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 215 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 251
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 154
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 155 LARLIEDAEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 43 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 99
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 100 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 159
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 160 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 218
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 219 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 255
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 154
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 154
Query: 471 NV-------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
+ APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 155 LARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ L G + +DF E + + HPNI+ L+ + +++++++ NGSL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 433 --------YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR--------ISAISNV---- 472
+ + G+ R + K + V +R + +S+
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 473 --------------------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 511
+ APEA I KFT DV+S+GIV+ E+++ G P
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEA-IAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
Query: 512 ENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
N V KA E L +D PA A + + L+C + + RP+
Sbjct: 232 TNQD------VIKAVEEGYRLPSPMDCPA------------ALYQLMLDCWQKERNSRPK 273
Query: 571 MRTVSESLDRV 581
+ LD++
Sbjct: 274 FDEIVNMLDKL 284
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 86
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYA-------------------------ALHGFG 440
IV+L + + LI DF+R G L+ LH G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 441 L--NRLLPGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFTQ 487
+ L P + + I + G +I + Y+APE + TQ
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQ 205
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525
D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 241
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 33 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 89
Query: 433 YAALH-----GFGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 90 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 149
Query: 471 NVYL-------------------APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
L APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 150 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 208
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 209 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 245
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 64/217 (29%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 34 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 90
Query: 433 YAALHG-----FGLNRLLPGTSKVTKN-----------------ETIVTSGTGSRISAIS 470
L +N+LL +++ + +V+ +I+
Sbjct: 91 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFG 150
Query: 471 NVYL-------------------APEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
L APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 151 LARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPG 209
Query: 511 ------------------PENDGKGLESLVRKAFRER 529
P+N + L L+R ++ER
Sbjct: 210 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 32 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 87
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYA-------------------------ALHGFG 440
IV+L + + LI DF+R G L+ LH G
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 441 L--NRLLPGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFTQ 487
+ L P + + I + G +I + Y+APE + TQ
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQ 206
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525
D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 86
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYA-------------------------ALHGFG 440
IV+L + + LI DF+R G L+ LH G
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 441 L--NRLLPGTSKVTKNETIVTSGTGSRISAISNV-----------YLAPEARIYGSKFTQ 487
+ L P + + I + G +I + Y+APE + TQ
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGHTQ 205
Query: 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525
D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 80/291 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ G +YK + G +VAV+RL E F++EVE I+ H N++
Sbjct: 37 ILGRGGFGKVYKGRLADG------XLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 90
Query: 409 RLKAF------------YYAN--------------------------------------- 417
RL+ F Y AN
Sbjct: 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 150
Query: 418 -DEKLLISD-----FIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 471
D K++ D + + A + FGL +L+ + V I I+
Sbjct: 151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DYKDXHVXXAVRGXIGHIAP 204
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAG--PENDGKGLESLVRKAFRE 528
YL+ K ++K DV+ +G++LLE++TG R D +D L V+ +E
Sbjct: 205 EYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 529 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
++ L ++D L + + +V +AL CT+ P RP+M V L+
Sbjct: 259 KK-LEALVDVDL-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 60/191 (31%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 73 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 434 AAL--HG----------------FGLNRLLPGTSKV------------------TKNETI 457
L HG GL +LL S+V T+N +
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN-CL 190
Query: 458 VTSGTGSRI--------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
V G +I + + ++ PE+ +Y KFT + DV+SFG+V
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVV 249
Query: 498 LLEILT-GRLP 507
L EI T G+ P
Sbjct: 250 LWEIFTYGKQP 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LAAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 60/191 (31%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 50 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 434 AAL--HG----------------FGLNRLLPGTSKV------------------TKNETI 457
L HG GL +LL S+V T+N +
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN-CL 167
Query: 458 VTSGTGSRI--------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
V G +I + + ++ PE+ +Y KFT + DV+SFG+V
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVV 226
Query: 498 LLEILT-GRLP 507
L EI T G+ P
Sbjct: 227 LWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 60/191 (31%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 44 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 434 AAL--HG----------------FGLNRLLPGTSKV------------------TKNETI 457
L HG GL +LL S+V T+N +
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN-CL 161
Query: 458 VTSGTGSRI--------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
V G +I + + ++ PE+ +Y KFT + DV+SFG+V
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVV 220
Query: 498 LLEILT-GRLP 507
L EI T G+ P
Sbjct: 221 LWEIFTYGKQP 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEXTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 307 LRAANILVGENLVCKVADFGLGRL------IEDNEYTARQGAKFPIK-----WTAPEAAL 355
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 356 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 406
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 407 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 131 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 179
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 180 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 230
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 231 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 129 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 177
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 178 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 228
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 229 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 140 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 188
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 189 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 239
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C DPE RP + L+
Sbjct: 240 CPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 58/220 (26%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + E ++ + V+G G++++ + VA++++ + RFK+
Sbjct: 31 DGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE------VAIKKVLQDK---RFKNR 81
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKL------LISDFI-----RNGSLYAAL----- 436
E ++ I V+HPN+V LKAF+Y+N +K L+ +++ R YA L
Sbjct: 82 ELQIMRI--VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP 139
Query: 437 ------------------HGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSR 465
H G+ N LL S V K + I+ +G +
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV 199
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
S Y APE + +T D++S G V+ E++ G+
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-- 530
Y+ PE I G + T+K DVYSFG+VL E+L R A ++ + + +L A
Sbjct: 207 YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNG 263
Query: 531 PLSEVIDPALVKEIHAKRQVLATF-HIALNCTELDPEFRPRMRTVSESLD 579
L +++DP L +I + + L F A+ C L E RP M V L+
Sbjct: 264 QLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 333 EGFSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW 387
E + + L DL A+ +++G G +YK V+ G+ VA++R T +++
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKRRTP-ESSQ 77
Query: 388 RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPG 447
++FE+E+E ++ +HP++V L F +E +LI ++ NG+L L+G LP
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD----LPT 133
Query: 448 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
S + + G + YL A I+ DV S I+L E ++
Sbjct: 134 MSMSWEQRLEICIGAARGLH-----YLHTRAIIHR-------DVKSINILLDENFVPKIT 181
Query: 508 DAGPENDGKGL 518
D G G L
Sbjct: 182 DFGISKKGTEL 192
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-- 530
Y+ PE I G + T+K DVYSFG+VL E+L R A ++ + + +L A
Sbjct: 207 YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNG 263
Query: 531 PLSEVIDPALVKEIHAKRQVLATF-HIALNCTELDPEFRPRMRTVSESLD 579
L +++DP L +I + + L F A+ C L E RP M V L+
Sbjct: 264 QLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 333 EGFSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW 387
E + + L DL A+ +++G G +YK V+ G+ VA++R T +++
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKRRTP-ESSQ 77
Query: 388 RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPG 447
++FE+E+E ++ +HP++V L F +E +LI ++ NG+L L+G LP
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD----LPT 133
Query: 448 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
S + + G + YL A I+ DV S I+L E ++
Sbjct: 134 MSMSWEQRLEICIGAARGLH-----YLHTRAIIHR-------DVKSINILLDENFVPKIT 181
Query: 508 DAGPENDGKGLE 519
D G G L+
Sbjct: 182 DFGISKKGTELD 193
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 137 LRAANILVGENLVCKVADFGLARL------IEDNEWTARQGAKFPIK-----WTAPEAAL 185
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 186 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 236
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 237 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 130 LRAANILVGENLVCKVADFGLARL------IEDNEXTARQGAKFPIK-----WTAPEAAL 178
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 179 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 229
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 230 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 45/177 (25%)
Query: 375 VAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E D R +F EV + R++HPNIV ++++++ GSLY
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 434 AALHGFGL------------------------NRLLPGTSK--------VTKNETIVTSG 461
LH G NR P + V K T+
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 462 TG-----------SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
G S+ +A + ++APE + +K DVYSFG++L E+ T + P
Sbjct: 183 FGLSRLKASXFLXSKXAAGTPEWMAPEV-LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 137 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 185
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 186 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 236
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 237 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 113/295 (38%), Gaps = 73/295 (24%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VAVRRLTEGDATWRFKDFE 393
F+ EL+ V+G + G +V GR G V VA++ L G + +DF
Sbjct: 36 FAKELDASCIKIERVIGAGEFG---EVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFL 92
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL----------YAALHGFGLNR 443
E + + HPN+V L+ +++ +F+ NG+L + + G+ R
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 444 LLP----------------------------------GTSKVTKNE-TIVTSGTGSRISA 468
+ G S+V +++ V + TG +I
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527
+ APEA Y KFT DV+S+GIV+ E+++ G P N V KA
Sbjct: 213 ---RWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIE 262
Query: 528 ERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
E L +D PA + L+C + + RP+ + LD++
Sbjct: 263 EGYRLPAPMDCPA------------GLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 389 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 437
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 438 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 488
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 489 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 133 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 181
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 182 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 232
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 233 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 45/177 (25%)
Query: 375 VAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E D R +F EV + R++HPNIV ++++++ GSLY
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 434 AALHGFGL------------------------NRLLPGTSK--------VTKNETIVTSG 461
LH G NR P + V K T+
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 462 TG-----------SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
G S+ +A + ++APE + +K DVYSFG++L E+ T + P
Sbjct: 183 FGLSRLKASTFLSSKSAAGTPEWMAPEV-LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 92/233 (39%), Gaps = 66/233 (28%)
Query: 340 EDLLRASAYVVGKSKNG--IMYKVVVGRGS------GMGAPTVVAV-------RRLTEGD 384
+D+ VG S +G + + + +GRGS G+ T V V R+LT+ +
Sbjct: 9 DDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE 68
Query: 385 ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-------LLISDFIRNGSLYAALH 437
RFK+ E E + +QHPNIVR FY + + +L+++ +G+L L
Sbjct: 69 RQ-RFKE---EAEXLKGLQHPNIVR---FYDSWESTVKGKKCIVLVTELXTSGTLKTYLK 121
Query: 438 GFGLNRLL---------------------PGTSKVTKNETIVTSG-TGS----------- 464
F + ++ P + K + I +G TGS
Sbjct: 122 RFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 465 -RISAISNVYLAPE---ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
R S V PE Y K+ + DVY+FG LE T P + +N
Sbjct: 182 KRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQN 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 354
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 355 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 405
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 406 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 354
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 355 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 405
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 406 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
L ++ + +L + FGL RL + NE G I + APEA +
Sbjct: 306 LRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAKFPIK-----WTAPEAAL 354
Query: 481 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539
YG +FT K DV+SFGI+L E+ T GR+P G N + + V + +R P P
Sbjct: 355 YG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCP------PE 405
Query: 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+ +H + C +PE RP + L+
Sbjct: 406 CPESLH---------DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 45/247 (18%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L EG ++ E+E + + H +IV+ K EK L+ +++
Sbjct: 36 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H GL +LL ++ + N+ +V G
Sbjct: 96 PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGD 155
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + APE + KF DV+SFG+ L E+LT
Sbjct: 156 FGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKECKFYYASDVWSFGVTLYELLTYCDS 214
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
+ P L + R L+E+++ + R +H+ NC E + F
Sbjct: 215 NQSPHTKFTELIGHTQGQMTVLR-LTELLERG-ERLPRPDRCPCEIYHLMKNCWETEASF 272
Query: 568 RPRMRTV 574
RP + +
Sbjct: 273 RPTFQNL 279
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 77
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ ++ K DV+S+G++L EI + G P G + D + S +R+ R R P
Sbjct: 267 WMAPES-IFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD-EDFCSRLREGMRMRAP 324
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
E P + + I L+C DP+ RPR + E L
Sbjct: 325 --EYSTPEI-------------YQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 45/247 (18%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L EG ++ E+E + + H +IV+ K EK L+ +++
Sbjct: 35 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H GL +LL ++ + N+ +V G
Sbjct: 95 PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGD 154
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + APE + KF DV+SFG+ L E+LT
Sbjct: 155 FGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKECKFYYASDVWSFGVTLYELLTYCDS 213
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
+ P L + R L+E+++ + R +H+ NC E + F
Sbjct: 214 NQSPHTKFTELIGHTQGQMTVLR-LTELLERG-ERLPRPDRCPCEIYHLMKNCWETEASF 271
Query: 568 RPRMRTV 574
RP + +
Sbjct: 272 RPTFQNL 278
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 95
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 47/184 (25%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
V A R + D + ++ E + A ++HPNI+ L+ L+ +F R G L
Sbjct: 34 AVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL 93
Query: 433 YAALHG----------------FGLNRL-----LPGTSKVTKNETI-----VTSG----- 461
L G G+N L +P + K+ I V +G
Sbjct: 94 NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153
Query: 462 ---------------TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506
T +A + ++APE I S F++ DV+S+G++L E+LTG +
Sbjct: 154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEV-IRASMFSKGSDVWSYGVLLWELLTGEV 212
Query: 507 PDAG 510
P G
Sbjct: 213 PFRG 216
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 110
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 88
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 84
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 88
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 388 RFKDFESEV-EAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLP 446
+ DF +++ E +A ++ N + L ++ + + SL + FGL R+
Sbjct: 111 KLIDFSAQIAEGMAYIERKNYIH---------RDLRAANVLVSESLMCKIADFGLARV-- 159
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 505
+ NE G I + APEA +G FT K DV+SFGI+L EI+T G+
Sbjct: 160 ----IEDNEYTAREGAKFPIK-----WTAPEAINFGC-FTIKSDVWSFGILLYEIVTYGK 209
Query: 506 LPDAGPEN 513
+P G N
Sbjct: 210 IPYPGRTN 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 31 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 80
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 89
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 53/220 (24%)
Query: 332 DEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFK 390
D + E+E + +G G +YK G+ G VAV+ L D T +F+
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYK---GKWHG-----DVAVKILKVVDPTPEQFQ 77
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----GFGLNRLLP 446
F +EV + + +H NI+ Y D +++ + SLY LH F + +L+
Sbjct: 78 AFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID 136
Query: 447 GTSKVTK-----------------NETIVTSGTGSRISAI-------------------- 469
+ + N + G +I
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 470 SNVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLP 507
S +++APE R+ + F+ + DVYS+GIVL E++TG LP
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 43/217 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ + GA + + + + T EV + ++ HPNI++
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL----------HGFGLNRLLPGTSKVTKNETI-- 457
L F+ L+ + R G L+ + + ++L GT+ + K+ +
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 458 ------VTSGTGSRISAISNV----------------------YLAPEARIYGSKFTQKC 489
+ + SR + I V Y+APE + K+ +KC
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE--VLRKKYDEKC 203
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526
DV+S G++L +L G P G + D + L+ + + F
Sbjct: 204 DVWSCGVILYILLCG-YPPFGGQTDQEILKRVEKGKF 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 43/217 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ + GA + + + + T EV + ++ HPNI++
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL----------HGFGLNRLLPGTSKVTKNETI-- 457
L F+ L+ + R G L+ + + ++L GT+ + K+ +
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 458 ------VTSGTGSRISAISNV----------------------YLAPEARIYGSKFTQKC 489
+ + SR + I V Y+APE + K+ +KC
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE--VLRKKYDEKC 186
Query: 490 DVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526
DV+S G++L +L G P G + D + L+ + + F
Sbjct: 187 DVWSCGVILYILLCG-YPPFGGQTDQEILKRVEKGKF 222
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 81
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 112
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 110
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA + KF+ K DV+SFGI+L EI + GR+P P K + V K ++ P
Sbjct: 165 WTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP 221
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ PA+ + + NC LD RP + E L+ +K
Sbjct: 222 --DGCPPAV-------------YEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 104
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA + KF+ K DV+SFGI+L EI + GR+P P K + V K ++ P
Sbjct: 180 WTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP 236
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ PA+ + + NC LD RP + E L+ +K
Sbjct: 237 --DGCPPAV-------------YEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 155
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 57/204 (27%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 114
Query: 409 RLKAFYYANDEKL------LISDFI--------RNGS------------LY--------A 434
RL+ F+Y++ EK L+ D++ R+ S LY A
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 435 ALHGFGL--------NRLLPGTSKVTK-----NETIVTSGTGSRISAISNVYLAPEARIY 481
+H FG+ N LL + V K + + G + S Y APE
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234
Query: 482 GSKFTQKCDVYSFGIVLLEILTGR 505
+ +T DV+S G VL E+L G+
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 59/217 (27%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGD------------ATWRFKD---FESEVEAIARVQHPN 406
V+G+GS V VR++T D AT + +D + E + +A V HP
Sbjct: 35 VLGQGS---FGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYA-------------------------ALHGFGL 441
+V+L + + LI DF+R G L+ LH G+
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 442 --NRLLPGTSKVTKNETIVTSGTGSRISAISN-----------VYLAPEARIYGSKFTQK 488
L P + + I + G AI + Y+APE + +
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV-VNRQGHSHS 210
Query: 489 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525
D +S+G+++ E+LTG LP G D K +L+ KA
Sbjct: 211 ADWWSYGVLMFEMLTGSLPFQG--KDRKETMTLILKA 245
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 69/214 (32%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKV------------ 451
HPNIV+L + + ++ +F+ G LY L L++ P V
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGI 135
Query: 452 ----TKNETIV-----------------------TSGTGSRISAISNV--------YLAP 476
+N IV + G+ ++ +V ++AP
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAP 195
Query: 477 EARIYGSK---FTQKCDVYSFGIVLLEILTGRLP 507
E G++ +T+K D YSF ++L ILTG P
Sbjct: 196 ET--IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 84/286 (29%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + V G + P VA++ L E +F E +A + HP++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 408 VRL---------------------------------------------KAFYYANDEKLL 422
VRL K Y + +L+
Sbjct: 80 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 423 ISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
D L + + FGL RLL G K + G ++ ++A E
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY-------NADGGKMPI---KWMALE 189
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
I+ KFT + DV+S+G+ + E++T G+ D P + + L+ K R +P
Sbjct: 190 C-IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKGERLPQPPICT 245
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
ID + + + C +D + RP+ + ++ R+
Sbjct: 246 ID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 84/286 (29%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + V G + P VA++ L E +F E +A + HP++
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 408 VRL---------------------------------------------KAFYYANDEKLL 422
VRL K Y + +L+
Sbjct: 103 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 423 ISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 477
D L + + FGL RLL G K + G ++ ++A E
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY-------NADGGKMPI---KWMALE 212
Query: 478 ARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535
I+ KFT + DV+S+G+ + E++T G+ D P + + L+ K R +P
Sbjct: 213 C-IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKGERLPQPPICT 268
Query: 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
ID + + + C +D + RP+ + ++ R+
Sbjct: 269 ID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA + + F+ K DV+SFGI+L EI + GR+P P K + V K ++ P
Sbjct: 171 WTAPEA-LREAAFSTKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEKGYKMDAP 227
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ PA+ + + NC LD RP + E L+ +K
Sbjct: 228 --DGCPPAV-------------YEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 69/214 (32%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKV------------ 451
HPNIV+L + + ++ +F+ G LY L L++ P V
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGI 135
Query: 452 ----TKNETIVT--------------------------SGTGSRISAISNV-----YLAP 476
+N IV S + + ++S + ++AP
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAP 195
Query: 477 EARIYGSK---FTQKCDVYSFGIVLLEILTGRLP 507
E G++ +T+K D YSF ++L ILTG P
Sbjct: 196 ET--IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 160 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 207
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 208 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 388 RFKDFESEV-EAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLP 446
+ DF +++ E +A ++ N + L ++ + + SL + FGL R+
Sbjct: 110 KLIDFSAQIAEGMAYIERKNYIH---------RDLRAANVLVSESLMCKIADFGLARV-- 158
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 505
+ NE G I + APEA +G FT K +V+SFGI+L EI+T G+
Sbjct: 159 ----IEDNEYTAREGAKFPIK-----WTAPEAINFGC-FTIKSNVWSFGILLYEIVTYGK 208
Query: 506 LPDAGPEN 513
+P G N
Sbjct: 209 IPYPGRTN 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 168 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 215
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 216 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 247
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 157 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 204
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 205 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 43/161 (26%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---HGFG-------LNR 443
+E+ + + HPNI++L + L+++F G L+ + H F + +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 444 LLPGTSKVTK----------------------NETIVTSGTGSRISAISNV--------Y 473
+L G + K N IV G S S + Y
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
+APE + K+ +KCDV+S G+++ +L G P G +ND
Sbjct: 215 IAPE--VLKKKYNEKCDVWSCGVIMYILLCG-YPPFGGQND 252
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 157 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 204
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 205 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAAL 436
+ L AFYY N+ +LI +F G++ A +
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVM 125
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 160 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 207
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 208 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 153 FGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 200
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 201 WEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 159 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 206
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 207 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 160 FGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 207
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 208 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 153 FGLSRLMTGDT--------FTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 200
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 201 WEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 160 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 207
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 208 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 59/191 (30%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL- 432
+VAV+ L + R KDF+ E E + +QH +IV+ D +++ +++++G L
Sbjct: 47 LVAVKALKDPTLAAR-KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 433 -YAALHG-----------------FGLNRLLPGTSKV------------------TKNET 456
+ HG GL+++L S++ T+N
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 165
Query: 457 I----------------VTSGTGSRISAISNV---YLAPEARIYGSKFTQKCDVYSFGIV 497
+ V S R+ + + ++ PE+ +Y KFT + DV+SFG++
Sbjct: 166 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVI 224
Query: 498 LLEILT-GRLP 507
L EI T G+ P
Sbjct: 225 LWEIFTYGKQP 235
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 153 FGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 200
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 201 WEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAAL 436
+ L AFYY N+ +LI +F G++ A +
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVM 125
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAAL 436
+ L AFYY N+ +LI +F G++ A +
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVM 125
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 156 FGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 203
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 204 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 235
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 160 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 207
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 208 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 155 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 202
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 203 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 359 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 406
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 407 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 438
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 362 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 409
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 410 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 441
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 401 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 448
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 449 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 480
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 157 FGLSRLMTGDT--------YTAPAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 204
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 205 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA + KF+ K DV+SFGI+L EI + GR+P P K + V K ++ P
Sbjct: 352 WTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP 408
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
+ PA+ + + NC LD RP + E L+ ++
Sbjct: 409 --DGCPPAV-------------YDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG++L
Sbjct: 156 FGLSRLMTGDT--------YTAPAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGVLL 203
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R RP
Sbjct: 204 WEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L + R KDF E E + +QH +IV+ D +++ +++++G L
Sbjct: 45 LVAVKTLKDASDNAR-KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 434 AALHGFGLNRLLPGT----SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 489
L G + +L +++T+++ + +I+A VYLA + ++ T+ C
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQML---HIAQQIAA-GMVYLASQHFVHRDLATRNC 159
Query: 490 DV 491
V
Sbjct: 160 LV 161
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-LKAFY 414
G +YK S + A V+ + E +D+ E++ +A HPNIV+ L AFY
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEE------LEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 415 YANDEKLLISDFIRNGSLYAAL 436
Y N+ +LI +F G++ A +
Sbjct: 78 YENNLWILI-EFCAGGAVDAVM 98
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL 436
L + LLI ++ + GSL L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 37/151 (24%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+R V + ++ V G I ++A E+ ++ +T + DV+SFG++L
Sbjct: 194 FGLSR------DVYEEDSXVKRSQGR----IPVKWMAIES-LFDHIYTTQSDVWSFGVLL 242
Query: 499 LEILT---GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLAT 553
EI+T P PE L +L++ R RP SE
Sbjct: 243 WEIVTLGGNPYPGIPPER----LFNLLKTGHRMERPDNCSE-----------------EM 281
Query: 554 FHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584
+ + L C + +P+ RP +S+ L+++ ++
Sbjct: 282 YRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
HPNIV+L + + ++ +F+ G LY L
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL 112
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 473 YLAPEARIYGSK---FTQKCDVYSFGIVLLEILTGRLP 507
++APE G++ +T+K D YSF ++L ILTG P
Sbjct: 192 WMAPET--IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL 436
L + LLI ++ + GSL L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 42/184 (22%)
Query: 411 KAFYYANDEKLLISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
+ Y + KL+ D L A + FGL+R V + ++ V G
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR------DVYEEDSYVKRSQGR- 213
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT---GRLPDAGPENDGKGLESLV 522
I ++A E+ ++ +T + DV+SFG++L EI+T P PE L +L+
Sbjct: 214 ---IPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER----LFNLL 265
Query: 523 RKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ R RP SE + + L C + +P+ RP +S+ L++
Sbjct: 266 KTGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEK 308
Query: 581 VKLQ 584
+ ++
Sbjct: 309 MMVK 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL 436
L + LLI ++ + GSL L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 42/184 (22%)
Query: 411 KAFYYANDEKLLISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
+ Y + KL+ D L A + FGL+R V + ++ V G
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR------DVYEEDSXVKRSQGR- 213
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT---GRLPDAGPENDGKGLESLV 522
I ++A E+ ++ +T + DV+SFG++L EI+T P PE L +L+
Sbjct: 214 ---IPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER----LFNLL 265
Query: 523 RKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
+ R RP SE + + L C + +P+ RP +S+ L++
Sbjct: 266 KTGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEK 308
Query: 581 VKLQ 584
+ ++
Sbjct: 309 MMVK 312
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+VG+ +G KV + GA +A ++ E + +D+ E+E +A HP IV
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGA---LAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAAL 436
+L YY + + ++ +F G++ A +
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIM 99
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 55/219 (25%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 20 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHG----FGLNRLLPGTSKVTKN---------- 454
L Y + +++ + SLY LH F + +L+ + +
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 455 ------------------------ETIVTSGTGS----RISAISNVYLAPEA-RIYGSK- 484
T+ + +GS ++S S +++APE R+ S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDSNP 189
Query: 485 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523
++ + DVY+FGIVL E++TG+LP + N + +E + R
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+VG+ +G KV + GA +A ++ E + +D+ E+E +A HP IV
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGA---LAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 79
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAAL 436
+L YY + + ++ +F G++ A +
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIM 107
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 470 SNVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523
S +++APE R+ S ++ + DVY+FGIVL E++TG+LP + N + +E + R
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 470 SNVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 526
S +++APE R+ S ++ + DVY+FGIVL E++TG+LP + N + +E + R +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGS--- 431
VA++ + EG + +DF E E + ++ HP +V+L L+++F+ +G
Sbjct: 35 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92
Query: 432 -------LYAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
L+AA L G L+ L G ++V K
Sbjct: 93 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 152
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 153 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 51/184 (27%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++R+ + E++A+++ HPNIV + DE L+ + GS+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 435 AL--------HGFG----------LNRLLPGTSKVTKNETI---VTSG------------ 461
+ H G L +L G + KN I V +G
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 462 ----------TGSRIS--------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503
TG I+ + ++APE + K D++SFGI +E+ T
Sbjct: 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
Query: 504 GRLP 507
G P
Sbjct: 223 GAAP 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506
G +++ K++ T+ G+ + Y+APE ++ T KCD++S G+V+ +LTG L
Sbjct: 172 GLAELFKSDEHSTNAAGTAL------YMAPE--VFKRDVTFKCDIWSAGVVMYFLLTGCL 223
Query: 507 PDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPE 566
P G LE + +KA + + P + + +Q+L DPE
Sbjct: 224 PFT-----GTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTK----------DPE 268
Query: 567 FRPRMRTV 574
RP V
Sbjct: 269 RRPSAAQV 276
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 85/228 (37%), Gaps = 48/228 (21%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 36 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 435 AL----HGFGLNRLLPGTSKVTKNETIVTSG----------------------------- 461
L H F +LL V + + S
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 462 -------TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 513
T SR S + PE +Y SKF+ K D+++FG+++ EI + G++P N
Sbjct: 154 YVLDDEYTSSRGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN 212
Query: 514 DGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
+ + R RP SE + + H K TF I L+
Sbjct: 213 SETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 51/184 (27%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++R+ + E++A+++ HPNIV + DE L+ + GS+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 435 AL--------HGFG----------LNRLLPGTSKVTKNETI---VTSG------------ 461
+ H G L +L G + KN I V +G
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 462 ----------TGSRIS--------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 503
TG I+ + ++APE + K D++SFGI +E+ T
Sbjct: 158 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
Query: 504 GRLP 507
G P
Sbjct: 218 GAAP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521
Y+APE R+ G+ ++ + D++S G+ L+E+ GR P P D K LE++
Sbjct: 179 YMAPE-RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPP--DAKELEAI 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APEA +YG KF+ D++S+G+VL E+ + G P G N V + R R+
Sbjct: 196 WMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------VVEMIRNRQV 248
Query: 532 LSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
L D PA V + + + C P RPR + + L
Sbjct: 249 LPCPDDCPAWV------------YALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APEA +YG KF+ D++S+G+VL E+ + G P G N V + R R+
Sbjct: 213 WMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------VVEMIRNRQV 265
Query: 532 LSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
L D PA V + + + C P RPR + + L
Sbjct: 266 LPCPDDCPAWV------------YALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI L E+ + G P G D K ++++ FR P
Sbjct: 236 WMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSP 293
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 294 E------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL+RL+ G + T+ G++ + APE+ Y + F+ K DV++FG++L
Sbjct: 174 FGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAYNT-FSIKSDVWAFGVLL 221
Query: 499 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
EI T G P G D + L+ K +R +P
Sbjct: 222 WEIATYGMSPYPGI--DLSQVYDLLEKGYRMEQP 253
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI L E+ + G P G D K ++++ FR P
Sbjct: 236 WMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSP 293
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 294 E------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI L E+ + G P G D K ++++ FR P
Sbjct: 231 WMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSP 288
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 289 E------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI L E+ + G P G D K ++++ FR P
Sbjct: 229 WMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSP 286
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 287 E------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 424 SDFIRNGSLYAALHGFGLNRLLPGTSKVTKN---------------ETIVTSGTGSRISA 468
S+ + N + + FGL+R +VT N + I+T +R
Sbjct: 138 SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW-- 195
Query: 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + +K+T+ D++S G +L EIL G+
Sbjct: 196 ----YRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL RLL +ET + G
Sbjct: 130 KGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGK- 182
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +FT + DV+S+G+ + E++T G P D P + + L+
Sbjct: 183 ---VPIKWMALES-ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP---AREIPDLLE 235
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
K R +P ID + I + C +D E RPR R + R+
Sbjct: 236 KGERLPQPPICTID---------------VYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I+ +T + DV+S+GI L E+ + G P G D K ++++ FR P
Sbjct: 213 WMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSP 270
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 580
HA ++ + I C + DP RP + + + +++
Sbjct: 271 E------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ + EG + DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 54 VAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 111
Query: 433 --------YAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
+AA L G L+ L G ++V K
Sbjct: 112 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 171
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 172 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 78/202 (38%), Gaps = 49/202 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK GI+Y G + +A++ + E D+ + + E+ ++H NIV
Sbjct: 29 VLGKGTYGIVYA-----GRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIV 82
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALH-------------GFGLNRLLPGTSKVTKNE 455
+ + N + + + GSL A L GF ++L G + N+
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 456 T--------------------IVTSGTGSRISAISNV---------YLAPEARIYGSK-F 485
I GT R++ I+ Y+APE G + +
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 486 TQKCDVYSFGIVLLEILTGRLP 507
+ D++S G ++E+ TG+ P
Sbjct: 203 GKAADIWSLGCTIIEMATGKPP 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 37 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 433 --------YAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
+AA L G L+ L G ++V K
Sbjct: 95 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 154
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 155 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 34 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 433 --------YAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
+AA L G L+ L G ++V K
Sbjct: 92 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 151
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 152 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ R + + R T + K E EV + + HPNI++
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPNIMK 100
Query: 410 LKAFYYANDEKLLISDFIRNGSLY-AALHGFGLN---------RLLPGTSKVTKNETI-- 457
L F+ L+ + + G L+ +H N ++L G + + K+ +
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 458 ----------------VTSGTGSRISAI------------SNVYLAPEARIYGSKFTQKC 489
+ +SA+ + Y+APE + K+ +KC
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE--VLRKKYDEKC 218
Query: 490 DVYSFGIVLLEILTGRLPDAG 510
DV+S G++L +L G P G
Sbjct: 219 DVWSIGVILFILLAGYPPFGG 239
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 32 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 433 --------YAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
+AA L G L+ L G ++V K
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR 149
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 150 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 78/202 (38%), Gaps = 49/202 (24%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK GI+Y G + +A++ + E D+ + + E+ ++H NIV
Sbjct: 15 VLGKGTYGIVYA-----GRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALH-------------GFGLNRLLPGTSKVTKNE 455
+ + N + + + GSL A L GF ++L G + N+
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 456 T--------------------IVTSGTGSRISAISNV---------YLAPEARIYGSK-F 485
I GT R++ I+ Y+APE G + +
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 486 TQKCDVYSFGIVLLEILTGRLP 507
+ D++S G ++E+ TG+ P
Sbjct: 189 GKAADIWSLGCTIIEMATGKPP 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 470 SNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
S +++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 50/177 (28%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL-- 432
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 34 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 433 --------YAA--LHGFGLN---------------------RLLPGTSKVTKNETI---- 457
+AA L G L+ L G ++V K
Sbjct: 92 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR 151
Query: 458 ------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP 507
TS TG++ + +PE + S+++ K DV+SFG+++ E+ + G++P
Sbjct: 152 FVLDDQYTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 37/149 (24%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG-------------- 440
EVE + ++HPNI+RL +++ + LI ++ G++Y L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 441 LNRLLPGTSKVT-----KNETIVTSGTG---------------SRISAISNV--YLAPEA 478
N L SK K E ++ G SR +A+ YL PE
Sbjct: 118 ANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
I G +K D++S G++ E L G+ P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + +S YL PE I G +K D++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM-IEGRMHDEKVDLWS 192
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 193 LGVLCYEFLVGKPP 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 45/242 (18%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L ++ E++ + + H +I++ K EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H GL +LL ++ + N+ +V G
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + APE + KF DV+SFG+ L E+LT
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLTHCDS 219
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
P L + + R L+E+++ + + +H+ NC E + F
Sbjct: 220 SQSPPTKFLELIGIAQGQMTVLR-LTELLERG-ERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 568 RP 569
RP
Sbjct: 278 RP 279
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 92/254 (36%), Gaps = 45/254 (17%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L ++ E++ + + H +I++ K EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H GL +LL ++ + N+ +V G
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + APE + KF DV+SFG+ L E+LT
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLTHCDS 219
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 567
P L + + R L+E+++ + + +H+ NC E + F
Sbjct: 220 SQSPPTKFLELIGIAQGQMTVLR-LTELLERG-ERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 568 RPRMRTVSESLDRV 581
RP + L V
Sbjct: 278 RPTFENLIPILKTV 291
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR +A+ YL PE I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEGRMHDEKVDLWS 194
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 195 LGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR +A+ YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 48/183 (26%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI++L F+
Sbjct: 49 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIMKLYEFFEDKGYFY 102
Query: 422 LISDFIRNGSLYAAL---HGFG-------LNRLLPGTSKVTKNET--------------- 456
L+ + G L+ + F + ++L G + + KN+
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 162
Query: 457 -------IVTSGTGSRISAISNV--------YLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
I+ G + A + Y+APE ++G+ + +KCDV+S G++L +
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGT-YDEKCDVWSTGVILYIL 220
Query: 502 LTG 504
L+G
Sbjct: 221 LSG 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 439 FGLNRLLPGT-SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
FG+ R + + + VT+ ++ GT YL+PE + G + DVYS G V
Sbjct: 160 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCV 208
Query: 498 LLEILTGRLPDAGPEND 514
L E+LTG P G D
Sbjct: 209 LYEVLTGEPPFTGDSPD 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 98
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 159 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 217
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 218 LGVLCYEFLVGKPP 231
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 51 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 169 YVLDDEETSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 225 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 51 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 169 YVLDDEYTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 225 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 109/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I+++ H NIVR + + ++ + + G L + L + L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 218 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 274
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 275 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 48/190 (25%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI++L F+
Sbjct: 55 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIMKLYEFFEDKGYFY 108
Query: 422 LISDFIRNGSLYAAL---HGFG-------LNRLLPGTSKVTKNET--------------- 456
L+ + G L+ + F + ++L G + + KN+
Sbjct: 109 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 168
Query: 457 -------IVTSGTGSRISAISNV--------YLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
I+ G + A + Y+APE ++G+ + +KCDV+S G++L +
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGT-YDEKCDVWSTGVILYIL 226
Query: 502 LTGRLPDAGP 511
L+G P G
Sbjct: 227 LSGCPPFNGA 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 42/150 (28%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---HGFG-------LNRL 444
EV+ + ++ HPNI++L F+ L+ + G L+ + F + ++
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 445 LPGTSKVTKNET----------------------IVTSGTGSRISAISNV--------YL 474
L G + + KN+ I+ G + A + Y+
Sbjct: 159 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILTG 504
APE ++G+ + +KCDV+S G++L +L+G
Sbjct: 219 APEV-LHGT-YDEKCDVWSTGVILYILLSG 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG++L EI T G P G P + L L+++ R +
Sbjct: 259 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDK 314
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 315 PSN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 42/150 (28%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---HGFG-------LNRL 444
EV+ + ++ HPNI++L F+ L+ + G L+ + F + ++
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 445 LPGTSKVTKNET----------------------IVTSGTGSRISAISNV--------YL 474
L G + + KN+ I+ G + A + Y+
Sbjct: 160 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 219
Query: 475 APEARIYGSKFTQKCDVYSFGIVLLEILTG 504
APE ++G+ + +KCDV+S G++L +L+G
Sbjct: 220 APEV-LHGT-YDEKCDVWSTGVILYILLSG 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 203 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 259
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 260 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 85 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 144
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 145 VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMSP 194
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 195 ESLKDGV-FTTYSDVWSFGVVLWEIAT 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 36 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 154 YVLDDEYTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 210 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 218 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 274
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 275 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G +Y L N L SK
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 196
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 197 LGVLCYEFLVGKPP 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 35 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 93 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 153 YVLDDEYTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 209 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 257
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 439 FGLNRLLPGT-SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
FG+ R + + + VT+ ++ GT YL+PE + G + DVYS G V
Sbjct: 160 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCV 208
Query: 498 LLEILTGRLPDAG 510
L E+LTG P G
Sbjct: 209 LYEVLTGEPPFTG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 45/168 (26%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYA-------------- 434
+D E+E + R QHPNI+ LK Y L+++ +R G L
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 435 -ALHGFG-----------LNRLLPGTSKVTKNET-------IVTSGTGSRISAISNV--- 472
LH G ++R L ++ + +E+ I G ++ A + +
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 473 ------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA-GPEN 513
++APE + + + CD++S GI+L +L G P A GP +
Sbjct: 185 PCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 109/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I+++ H NIVR + + ++ + + G L + L + L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 204 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 260
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 261 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APEA ++ +T + DV+SFG++L EI T G G +E L +
Sbjct: 218 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGSPYPGVPVEELFK--------- 263
Query: 533 SEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L+KE H + + + +C P RP + + E LDR+
Sbjct: 264 -------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 214 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DA 270
Query: 516 KGLE 519
K LE
Sbjct: 271 KELE 274
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
Y+APE + G K+ D +SFG++L E+L G+ P G + +
Sbjct: 184 YIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 439 FGLNRLLPGT-SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
FG+ R + + + VT+ ++ GT YL+PE + G + DVYS G V
Sbjct: 160 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCV 208
Query: 498 LLEILTGRLPDAG 510
L E+LTG P G
Sbjct: 209 LYEVLTGEPPFTG 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG++L EI T G P G P + L L+++ R +
Sbjct: 218 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDK 273
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 274 PSN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 439 FGLNRLLPGT-SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
FG+ R + + + VT+ ++ GT YL+PE + G + DVYS G V
Sbjct: 160 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCV 208
Query: 498 LLEILTGRLPDAG 510
L E+LTG P G
Sbjct: 209 LYEVLTGEPPFTG 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514
Y+APE + G K+ D +SFG++L E+L G+ P G + +
Sbjct: 185 YIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 225
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG++L EI T G P G P + L L+++ R +
Sbjct: 218 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDK 273
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 274 PSN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 45/168 (26%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYA-------------- 434
+D E+E + R QHPNI+ LK Y L+++ +R G L
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 435 -ALHGFG-----------LNRLLPGTSKVTKNET-------IVTSGTGSRISAISNV--- 472
LH G ++R L ++ + +E+ I G ++ A + +
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 473 ------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA-GPEN 513
++APE + + + CD++S GI+L +L G P A GP +
Sbjct: 185 PCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD 231
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 94 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 153
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 154 VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMSP 203
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 204 ESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG++L EI T G P G P + L L+++ R +
Sbjct: 210 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDK 265
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 266 PSN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 42 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 100 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 160 YVLDDEYTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 216 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 264
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APEA ++ +T + DV+SFG++L EI T G G +E L +
Sbjct: 207 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGSPYPGVPVEELFK--------- 252
Query: 533 SEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L+KE H + + + +C P RP + + E LDR+
Sbjct: 253 -------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APEA ++ +T + DV+SFG++L EI T G G +E L +
Sbjct: 211 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGSPYPGVPVEELFK--------- 256
Query: 533 SEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L+KE H + + + +C P RP + + E LDR+
Sbjct: 257 -------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 74/193 (38%), Gaps = 38/193 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 98
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 158
Query: 453 --KNETIVTSGTGS-RISAISNVYLAPEAR---------------IYGSKFTQKCDVYSF 494
K E ++ G +I+ AP +R I G +K D++S
Sbjct: 159 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 218
Query: 495 GIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 219 GVLCYEFLVGKPP 231
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 218 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 274
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 275 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 89
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 149
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 150 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 208
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 209 LGVLCYEFLVGKPP 222
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APEA ++ +T + DV+SFG++L EI T G G +E L +
Sbjct: 218 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGSPYPGVPVEELFK--------- 263
Query: 533 SEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L+KE H + + + +C P RP + + E LDR+
Sbjct: 264 -------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 42/203 (20%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 -------------------------AALHGFGL--------NRL---LPGTSKVTKNETI 457
LH G+ N L L SK+ ++
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 458 VT--SGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
++ GS +S Y+APE + +++ D +S G++ +L G P EN
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 514 DGKGLESLVRKAFRERRPLSEVI 536
D K E +++ + P + I
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI 245
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 214 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 269
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 270 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 439 FGLNRLLPGT-SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 497
FG+ R + + + VT+ ++ GT YL+PE + G + DVYS G V
Sbjct: 177 FGIARAIADSGNSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCV 225
Query: 498 LLEILTGRLPDAG 510
L E+LTG P G
Sbjct: 226 LYEVLTGEPPFTG 238
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
++APEA ++ +T + DV+SFG++L EI T G G +E L +
Sbjct: 203 WMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGSPYPGVPVEELFK--------- 248
Query: 533 SEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
L+KE H + + + +C P RP + + E LDR+
Sbjct: 249 -------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEX-IEGRXHDEKVDLWS 196
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 197 LGVLCYEFLVGKPP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 54/231 (23%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 31 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 435 AL----HGFGLNRLLPGTSKVTK-----------------------NETIV--------- 458
L H F +LL V + ++ +V
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
Query: 459 -------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
TS GS+ + PE +Y SKF+ K D+++FG+++ EI + G++P
Sbjct: 149 YVLDDEYTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
Query: 511 PENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALN 559
N + + R RP SE + + H K TF I L+
Sbjct: 205 FTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 212 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 267
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 268 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 203 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 259
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 260 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 217 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 272
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 273 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 179 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DA 235
Query: 516 KGLE 519
K LE
Sbjct: 236 KELE 239
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 135 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 195 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 251
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 252 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 225 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 280
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 281 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 244 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 300
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 301 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 204 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 260
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 261 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 45/181 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLISDFIRNGSL 432
VAV+ L D + E+E + + H NIV+ K + + LI +F+ +GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 433 ------------------YAALHGFGLNRL---------LPGTSKVTKNETIVTSGTGSR 465
YA G++ L L + + ++E V G
Sbjct: 101 KEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL 160
Query: 466 ISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
AI + APE + SKF DV+SFG+ L E+LT D+
Sbjct: 161 TKAIETDKEXXTVKDDRDSPVFWYAPEC-LMQSKFYIASDVWSFGVTLHELLTYCDSDSS 219
Query: 511 P 511
P
Sbjct: 220 P 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 152 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI--PPPDA 208
Query: 516 KGLE 519
K LE
Sbjct: 209 KELE 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 45/181 (24%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLISDFIRNGSL 432
VAV+ L D + E+E + + H NIV+ K + + LI +F+ +GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 433 ------------------YAALHGFGLNRL---------LPGTSKVTKNETIVTSGTGSR 465
YA G++ L L + + ++E V G
Sbjct: 113 KEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL 172
Query: 466 ISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
AI + APE + SKF DV+SFG+ L E+LT D+
Sbjct: 173 TKAIETDKEXXTVKDDRDSPVFWYAPEC-LMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231
Query: 511 P 511
P
Sbjct: 232 P 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 42/198 (21%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 -------------------------AALHGFGL--------NRL---LPGTSKVTKNETI 457
LH G+ N L L SK+ ++
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 458 VT--SGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
++ GS +S Y+APE + +++ D +S G++ +L G P EN
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 514 DGKGLESLVRKAFRERRP 531
D K E +++ + P
Sbjct: 223 DAKLFEQILKAEYEFDSP 240
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 221 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY--PSKSNQEVLEFVT 277
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 278 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 152 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI--PPPDA 208
Query: 516 KGLE 519
K LE
Sbjct: 209 KELE 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 220 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 276
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 277 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 74
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 135 DIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 193
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 194 LGVLCYEFLVGKPP 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERR 530
++APEA ++ +T + DV+SFG+++ EI T G P G P + L L+++ R +
Sbjct: 271 WMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDK 326
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P + E+ + + +C P RP + + E LDR+
Sbjct: 327 PAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 204 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 260
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 261 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 194
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 195 LGVLCYEFLVGKPP 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 152 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DA 208
Query: 516 KGLE 519
K LE
Sbjct: 209 KELE 212
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 462 TGSRISAISNV------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 515
+G I +++N Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D
Sbjct: 152 SGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DA 208
Query: 516 KGLE 519
K LE
Sbjct: 209 KELE 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 194
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 195 LGVLCYEFLVGKPP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 38/193 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G +Y L N L SK
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 453 --KNETIVTSGTGS-RISAISNVYLAPEAR---------------IYGSKFTQKCDVYSF 494
K E ++ G +I+ AP +R I G +K D++S
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSL 197
Query: 495 GIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 198 GVLCYEFLVGKPP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FG+ R + S + +T GT YL+PE + G + DVYS G VL
Sbjct: 160 FGIARAI-ADSGNSVXQTAAVIGTAQ--------YLSPE-QARGDSVDARSDVYSLGCVL 209
Query: 499 LEILTGRLPDAG 510
E+LTG P G
Sbjct: 210 YEVLTGEPPFTG 221
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 445 L-------PGTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 210 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 266
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 267 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 108/296 (36%), Gaps = 72/296 (24%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH----------GFGLNRL 444
E I++ H NIVR + + ++ + + G L + L + L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 445 LP-------GTSKVTKNETI----------VTSGTGSRISAISNV--------------- 472
L G + +N I +T R++ I +
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 473 --------YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 523
++ PEA + G FT K D +SFG++L EI + G +P P + + V
Sbjct: 230 GCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVT 286
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
R +DP K + I C + PE RP + E ++
Sbjct: 287 SGGR--------MDP-------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 25/171 (14%)
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 471
A Y ++ + D L +A L G S+ ++ T + G +
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDF--GLSRYMEDSTYYKASKGK----LPI 176
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 530
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER
Sbjct: 177 KWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERL 231
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P+ P L + + C DP RPR + L +
Sbjct: 232 PMPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 42/203 (20%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 -------------------------AALHGFGL--------NRL---LPGTSKVTKNETI 457
LH G+ N L L SK+ ++
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 458 VT--SGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
++ GS +S Y+APE + +++ D +S G++ +L G P EN
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 514 DGKGLESLVRKAFRERRPLSEVI 536
D K E +++ + P + I
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 71
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 131
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 132 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 190
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 191 LGVLCYEFLVGKPP 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 196
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 197 LGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 100 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 159
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 209
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 210 ESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 502
+ +Y++PE +I+G+ ++ K D++S G++L E+L
Sbjct: 239 TKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 87 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 146
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 147 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 196
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 197 ESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 344 RASAYVVGKSKNGI--MYKV--VVGRGSGMGAPTVVA----VRRLTEGDATWRFKD---F 392
R + Y G +K I Y + +GRGS V +RR + + +D F
Sbjct: 11 RENLYFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF 70
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+ E+E + + HPNI+RL + N + L+ + G L+
Sbjct: 71 KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF 111
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
E+E A + HPNI+RL ++Y LI ++ G LY L
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 91 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 150
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 151 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 200
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 201 ESLKDGV-FTTYSDVWSFGVVLWEIAT 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 42/203 (20%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 -------------------------AALHGFGL--------NRL---LPGTSKVTKNETI 457
LH G+ N L L SK+ ++
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 458 VT--SGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 513
++ GS +S Y+APE + +++ D +S G++ +L G P EN
Sbjct: 165 LSKMEDPGSVLSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDEN 222
Query: 514 DGKGLESLVRKAFRERRPLSEVI 536
D K E +++ + P + I
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDI 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 194
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 195 LGVLCYEFLVGKPP 208
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 93 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 152
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 153 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 202
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 203 ESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + + YL PE I G +K D++S
Sbjct: 137 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 195
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 196 LGVLCYEFLVGKPP 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + YL PE I G +K D++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWS 192
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 193 LGVLCYEFLVGKPP 206
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 424 SDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 483
S+ + N + + FGL R++ ++ T SG ++ + Y APE + +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA--TRWYRAPEVMLTSA 198
Query: 484 KFTQKCDVYSFGIVLLEILTGR 505
K+++ DV+S G +L E+ R
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + YL PE I G +K D++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM-IEGRMHDEKVDLWS 192
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 193 LGVLCYEFLVGKPP 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
+D E EV + +QHPN++ L Y + +LI + + G L+ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES 394
F+++ D++R +GK K G +Y + + A V+ +L + + +
Sbjct: 11 FTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---R 63
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG 440
E+E + ++HPNI+R+ +++ L+ +F G LY L G
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG 109
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
+ + FGL +LLP + K+ +V S I + APE+ + + F+++ DV+
Sbjct: 149 HVKIADFGLAKLLP----LDKDXXVVREPGQSPI-----FWYAPES-LSDNIFSRQSDVW 198
Query: 493 SFGIVLLEILT 503
SFG+VL E+ T
Sbjct: 199 SFGVVLYELFT 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 206 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 260
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 261 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 94 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 153
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 154 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 203
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 204 ESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 502
+ +Y++PE +I+G+ ++ K D++S G++L E+L
Sbjct: 193 TKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 74
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 134
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + YL PE I G +K D++S
Sbjct: 135 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEKVDLWS 193
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 194 LGVLCYEFLVGKPP 207
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 93 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 152
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 153 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 202
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 203 ESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 137
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEKVDLWS 196
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 197 LGVLCYEFLVGKPP 210
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 183 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 237
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 238 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 424 SDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 483
S+ + N + + FGL R++ ++ T SG ++ + Y APE + +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA--TRWYRAPEVMLTSA 198
Query: 484 KFTQKCDVYSFGIVLLEILTGR 505
K+++ DV+S G +L E+ R
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 361 VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420
+V+ G +V +R+TE D RF F+ + AI IV E
Sbjct: 86 MVIEYAGGELFDYIVEKKRMTE-DEGRRF--FQQIICAIEYCHRHKIVHRDL----KPEN 138
Query: 421 LLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480
LL+ D +L + FGL+ I+T G + S S Y APE I
Sbjct: 139 LLLDD-----NLNVKIADFGLS-------------NIMTDGNFLKTSCGSPNYAAPEV-I 179
Query: 481 YGSKFT-QKCDVYSFGIVLLEILTGRLP 507
G + + DV+S GIVL +L GRLP
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 505
G S+ ++ T + G + ++APE+ I +FT DV+ FG+ + EIL G
Sbjct: 153 GLSRYMEDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGV 207
Query: 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 565
P G +N+ + + R ER P+ P L + + C DP
Sbjct: 208 KPFQGVKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDP 250
Query: 566 EFRPRMRTVSESLDRV 581
RPR + L +
Sbjct: 251 SRRPRFTELKAQLSTI 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 181 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 235
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 236 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 37/149 (24%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG-------------- 440
EVE + ++HPNI+RL +++ LI ++ G++Y L
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 441 ------------LNR------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEA 478
++R LL G++ K+ V + + R + + YL PE
Sbjct: 115 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
I G +K D++S G++ E L G+ P
Sbjct: 175 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 178 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 232
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 233 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 74/193 (38%), Gaps = 38/193 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 453 --KNETIVTSGTGS-RISAISNVYLAPEAR---------------IYGSKFTQKCDVYSF 494
K E ++ G +I+ AP +R I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 495 GIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 196 GVLCYEFLVGKPP 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 25/171 (14%)
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 471
A Y ++ + D L +A L G S+ ++ T + G +
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDF--GLSRYMEDSTYYKASKGK----LPI 556
Query: 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 530
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER
Sbjct: 557 KWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERL 611
Query: 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
P+ P L + + C DP RPR + L +
Sbjct: 612 PMPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 132
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + YL PE I G +K D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEKVDLWS 191
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 192 LGVLCYEFLVGKPP 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 505
G S+ ++ T + G + ++APE+ I +FT DV+ FG+ + EIL G
Sbjct: 156 GLSRYMEDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 565
P G +N+ + + R ER P+ P L + + C DP
Sbjct: 211 KPFQGVKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDP 253
Query: 566 EFRPRMRTVSESLDRV 581
RPR + L +
Sbjct: 254 SRRPRFTELKAQLSTI 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 180 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 234
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 235 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512
Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P+
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 23/136 (16%)
Query: 447 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 505
G S+ ++ T + G + ++APE+ I +FT DV+ FG+ + EIL G
Sbjct: 156 GLSRYMEDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 565
P G +N+ + + R ER P+ P L + + C DP
Sbjct: 211 KPFQGVKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDP 253
Query: 566 EFRPRMRTVSESLDRV 581
RPR + L +
Sbjct: 254 SRRPRFTELKAQLSTI 269
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 122 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 181
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 182 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK------GGKG----LLPVRWMSP 231
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 232 ESLKDGV-FTTYSDVWSFGVVLWEIAT 257
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
++ Y APE + ++TQ D++S G ++ E++TG+
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 135
Query: 444 ------LLPGTS---KVTKNETIVTSGTGSRISAISNV-YLAPEARIYGSKFTQKCDVYS 493
LL G++ K+ V + + R + YL PE I G +K D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEKVDLWS 194
Query: 494 FGIVLLEILTGRLP 507
G++ E L G+ P
Sbjct: 195 LGVLCYEFLVGKPP 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + E+E + ++HPNI+R
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---REIEIQSHLRHPNILR 78
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG 440
+ +++ L+ +F G LY L G
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHG 109
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL +LLP + K+ +V S I + APE+ + + F+++ DV+SFG+VL
Sbjct: 158 FGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDNIFSRQSDVWSFGVVL 207
Query: 499 LEILT 503
E+ T
Sbjct: 208 YELFT 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ ++L+ D F+ E E ++QHPNIVRL L+ D + G
Sbjct: 58 AAKIINTKKLSARD----FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 431 SLY 433
L+
Sbjct: 114 ELF 116
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + E+E + ++HPNI+R
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---REIEIQSHLRHPNILR 79
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG 440
+ +++ L+ +F G LY L G
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHG 110
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 48/183 (26%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI +L F+
Sbjct: 49 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIXKLYEFFEDKGYFY 102
Query: 422 LISDFIRNGSLYAAL---HGFG-------LNRLLPGTSKVTKNET--------------- 456
L+ + G L+ + F + ++L G + KN+
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESK 162
Query: 457 -------IVTSGTGSRISAI--------SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEI 501
I+ G + A + Y+APE ++G+ + +KCDV+S G++L +
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV-LHGT-YDEKCDVWSTGVILYIL 220
Query: 502 LTG 504
L+G
Sbjct: 221 LSG 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL +LLP + K+ +V S I + APE+ + + F+++ DV+SFG+VL
Sbjct: 159 FGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDNIFSRQSDVWSFGVVL 208
Query: 499 LEILT 503
E+ T
Sbjct: 209 YELFT 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE+ I +FT DV+ FG+ + EIL G P G +N+ + + R ER P
Sbjct: 558 WMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLP 612
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ P L + + C DP RPR + L +
Sbjct: 613 MPPNCPPTL-------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL +LLP + K+ +V S I + APE+ + + F+++ DV+SFG+VL
Sbjct: 171 FGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDNIFSRQSDVWSFGVVL 220
Query: 499 LEILT 503
E+ T
Sbjct: 221 YELFT 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 363 VGRGSGMGAPTVVA----VRRLTEGDATWRFKD---FESEVEAIARVQHPNIVRLKAFYY 415
+GRGS V +RR + + +D F+ E+E + + HPNI+RL +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 416 ANDEKLLISDFIRNGSLY 433
N + L+ + G L+
Sbjct: 77 DNTDIYLVMELCTGGELF 94
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 419 EKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEA 478
E LL +D N +L + FG RL P ++ K Y APE
Sbjct: 135 ENLLFTD--ENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH------------YAAPEL 180
Query: 479 RIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
+ + + + CD++S G++L +L+G++P
Sbjct: 181 -LNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 84 CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 143
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 203
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 204 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 251
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 252 ------VYMIMVKCWMIDADSRPKFREL 273
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y++PE R+ G+ ++ + D++S G+ L+E+ GR P
Sbjct: 172 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
Y++PE R+ G+ ++ + D++S G+ L+E+ GR P
Sbjct: 188 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 81 CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 248
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 249 ------VYMIMVKCWMIDADSRPKFREL 270
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 82 CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 249
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 250 ------VYMIMVKCWMIDADSRPKFREL 271
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 424 SDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 483
S+ + N + + FGL R++ ++ T SG ++ + Y APE + +
Sbjct: 141 SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA--TRWYRAPEVMLTSA 198
Query: 484 KFTQKCDVYSFGIVLLEILTGR 505
K+++ DV+S G +L E+ R
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 83 CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 250
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 251 ------VYMIMVKCWMIDADSRPKFREL 272
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLY 433
L L+ D + G L+
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELF 93
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLY 433
L L+ D + G L+
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELF 93
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 80 CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 247
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 248 ------VYMIMVKCWMIDADSRPKFREL 269
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 68
Query: 410 LKAFYYANDEKLLISDFIRNGSLY 433
L L+ D + G L+
Sbjct: 69 LHDSIQEESFHYLVFDLVTGGELF 92
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + E+E + P++ ++ Y N K
Sbjct: 87 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 146
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D A + FG+ R + T K G G + +++P
Sbjct: 147 VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 196
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 197 ESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 62/268 (23%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 408 VRLKAFYYANDEKLLIS--------DFIRN-----GSLY----AALHGFGLNRL------ 444
RL + +L++ D++R GS Y G+N L
Sbjct: 81 CRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 445 ---LPGTS---KVTKNETIVTSGTGSRISAISNVYLAPEAR----------IYGSKFTQK 488
L + K ++ I G + A Y A + I +T +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 489 CDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
DV+S+G+ + E++T G P D P ++ + S++ K R +P ID
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGERLPQPPICTID--------- 248
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTV 574
+ I + C +D + RP+ R +
Sbjct: 249 ------VYMIMVKCWMIDADSRPKFREL 270
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 123
Query: 451 V 451
+
Sbjct: 124 L 124
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 117
Query: 451 V 451
+
Sbjct: 118 L 118
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 117
Query: 451 V 451
+
Sbjct: 118 L 118
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 117
Query: 451 V 451
+
Sbjct: 118 L 118
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 116
Query: 451 V 451
+
Sbjct: 117 L 117
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 183
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 184 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 236
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 237 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 84/252 (33%), Gaps = 60/252 (23%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T+VAV+ E F E + + HPNIVRL ++ + ++ G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 433 YAALHGFG---------------------------LNRLLPG-TSKVTKNETIVTSGTGS 464
L G ++R L VT+ + S G
Sbjct: 200 LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM 259
Query: 465 RISAISNVY-------------LAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 510
VY APEA YG +++ + DV+SFGI+L E + G P
Sbjct: 260 SREEADGVYAASGGLRQVPVKWTAPEALNYG-RYSSESDVWSFGILLWETFSLGASPY-- 316
Query: 511 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 570
P + V K R P E+ A+ F + C +P RP
Sbjct: 317 PNLSNQQTREFVEKG--GRLPCPELCPDAV-------------FRLMEQCWAYEPGQRPS 361
Query: 571 MRTVSESLDRVK 582
T+ + L ++
Sbjct: 362 FSTIYQELQSIR 373
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 182
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 183 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 235
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 236 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 271
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 62/242 (25%)
Query: 384 DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG-LN 442
DA R D E++ + ++ HPN+++ A + ++E ++ + G L + F
Sbjct: 72 DAKAR-ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 443 RLLPGTS----------------------KVTKNETIVTSGTG--------------SRI 466
RL+P + + K + + TG S+
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
Query: 467 SAISNV-----YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521
+A ++ Y++PE RI+ + + K D++S G +L E+ + P G D L SL
Sbjct: 191 TAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSL 246
Query: 522 VRKAFRERRPLSEVIDPALVKEIHAK--RQVLATFHIALNCTELDPEFRPRMRTVSESLD 579
+K + + P L + +++ RQ++ C DPE RP + V +
Sbjct: 247 CKK-------IEQCDYPPLPSDHYSEELRQLVNM------CINPDPEKRPDVTYVYDVAK 293
Query: 580 RV 581
R+
Sbjct: 294 RM 295
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 205
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 206 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 258
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 259 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 294
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 180
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 181 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 233
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 234 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 183
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 184 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 236
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 237 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 186
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 187 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 239
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 240 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 275
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 180
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 181 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 233
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 234 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 267
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 187
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 188 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 240
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 241 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 274
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 180
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 181 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 233
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 234 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 187
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 188 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 240
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 574
K R +P ID + I + C +D + RP+ R +
Sbjct: 241 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 276
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 187
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 188 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 240
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 241 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 274
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 52/208 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-EGDATWRFKDFESEVEAIARVQHPNI 407
V+GK +M V + R G V VRR+ E + + E+ HPNI
Sbjct: 32 VIGKGFEDLM-TVNLARYKPTGE--YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
Query: 408 VRLKAFYYANDEKLLISDFIRNGS--------LYAALHGFGLNRLLPGTSK--------- 450
V +A + A++E +++ F+ GS ++ + +L G K
Sbjct: 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG 148
Query: 451 ------------VTKNETIVTSGTGSRISAISN------------------VYLAPEARI 480
++ + + SG S +S IS+ +L+PE
Sbjct: 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 208
Query: 481 YGSK-FTQKCDVYSFGIVLLEILTGRLP 507
+ + K D+YS GI E+ G +P
Sbjct: 209 QNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 242
Query: 451 V 451
+
Sbjct: 243 L 243
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 78/208 (37%), Gaps = 52/208 (25%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-EGDATWRFKDFESEVEAIARVQHPNI 407
V+GK +M V + R G V VRR+ E + + E+ HPNI
Sbjct: 16 VIGKGFEDLM-TVNLARYKPTGE--YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 72
Query: 408 VRLKAFYYANDEKLLISDFIRNGS---LYAALHGFGLNRL-----LPGTSK--------- 450
V +A + A++E +++ F+ GS L G+N L L G K
Sbjct: 73 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG 132
Query: 451 ------------VTKNETIVTSGTGSRISAISN------------------VYLAPEARI 480
++ + + SG S +S IS+ +L+PE
Sbjct: 133 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 192
Query: 481 YGSK-FTQKCDVYSFGIVLLEILTGRLP 507
+ + K D+YS GI E+ G +P
Sbjct: 193 QNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 162 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 214
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 215 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 267
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 268 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 301
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSK 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + G RL T K
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV--VGNKRLKEATCK 256
Query: 451 V 451
+
Sbjct: 257 L 257
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 83
Query: 418 DEKLLISDFIRNGSLYAAL 436
L+ D ++ G L+ L
Sbjct: 84 TFFFLVFDLMKKGELFDYL 102
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+++PE+ I +FT DV+ F + + EIL+ G+ P EN K + ++ K +R P
Sbjct: 192 WMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG--DRLP 246
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
++ P L + + C + DP RPR + SL V
Sbjct: 247 KPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543
+FT K DV+SFG++L E+LT P P + A R P E +L
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAP---PYRHIDPFDLTHFLAQGRRLPQPEYCPDSL--- 257
Query: 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ + C E DP RP R + ++++
Sbjct: 258 ----------YQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------LNRLLPGTSKVT--- 452
L +++ LI ++ G++Y L N L SK
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 453 --KNETIVTSGTG---------------SRISAISNV--YLAPEARIYGSKFTQKCDVYS 493
K E ++ G SR + + YL PE I G +K D++S
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWS 195
Query: 494 FGIVLLEILTGRLP 507
G++ E L G P
Sbjct: 196 LGVLCYEFLVGMPP 209
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 411 KAFYYANDEKLLISDFIRNGSL-----YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSR 465
K Y D +L+ D L + + FGL +LL K E G +
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGK 174
Query: 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVR 523
+ ++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++
Sbjct: 175 VPI---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE 227
Query: 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 572
K R +P ID + I + C +D + RP+ R
Sbjct: 228 KGERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 261
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+++PE+ I +FT DV+ F + + EIL+ G+ P EN K + ++ K +R P
Sbjct: 180 WMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG--DRLP 234
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
++ P L + + C + DP RPR + SL V
Sbjct: 235 KPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL+ ++ E EV + ++HPNI+ L + + +
Sbjct: 25 RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84
Query: 422 LISDFIRNGSLYAAL 436
LI + + G L+ L
Sbjct: 85 LILELVSGGELFDFL 99
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+++PE+ I +FT DV+ F + + EIL+ G+ P EN K + ++ K +R P
Sbjct: 176 WMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG--DRLP 230
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
++ P L + + C + DP RPR + SL V
Sbjct: 231 KPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL+ ++ E EV + ++HPNI+ L + + +
Sbjct: 32 RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 91
Query: 422 LISDFIRNGSLYAAL 436
LI + + G L+ L
Sbjct: 92 LILELVSGGELFDFL 106
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 96
Query: 418 DEKLLISDFIRNGSLYAAL 436
L+ D ++ G L+ L
Sbjct: 97 TFFFLVFDLMKKGELFDYL 115
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 96
Query: 418 DEKLLISDFIRNGSLYAAL 436
L+ D ++ G L+ L
Sbjct: 97 TFFFLVFDLMKKGELFDYL 115
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 40/194 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHGFG--------------------------LNR 443
L +++ LI ++ G++Y L ++R
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 444 -LLPGTSKVTKNETIVTSGTGSRISAISNV---------YLAPEARIYGSKFTQKCDVYS 493
+ P + N + + G + A S+ YL PE I G +K D++S
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM-IEGRMHDEKVDLWS 195
Query: 494 FGIVLLEILTGRLP 507
G++ E L G P
Sbjct: 196 LGVLCYEFLVGMPP 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
+ APEA YG +++ + DV+SFGI+L E + G P P + V K R P
Sbjct: 281 WTAPEALNYG-RYSSESDVWSFGILLWETFSLGASPY--PNLSNQQTREFVEKG--GRLP 335
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582
E+ A+ F + C +P RP T+ + L ++
Sbjct: 336 CPELCPDAV-------------FRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ I+Y+ + G P + V + T R +E+ + R+ HPNI++
Sbjct: 61 LGRGATSIVYRC---KQKGTQKPYALKVLKKTVDKKIVR-----TEIGVLLRLSHPNIIK 112
Query: 410 LKAFYYANDEKLLISDFIRNGSLY 433
LK + E L+ + + G L+
Sbjct: 113 LKEIFETPTEISLVLELVTGGELF 136
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 100/275 (36%), Gaps = 62/275 (22%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G ++K V + G + P + V G + F+ + AI + H +I
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS--FQAVTDHMLAIGSLDHAHI 95
Query: 408 VRLKAFYYANDEKLL--------ISDFIRN-------------------GSLYAALHGFG 440
VRL + +L+ + D +R G Y HG
Sbjct: 96 VRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 154
Query: 441 LNRLLPGTSKVTKNETIVTS---GTGSRISAISNVYLAPEAR----------IYGSKFTQ 487
++R L + + K+ + V G + L EA+ I+ K+T
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 214
Query: 488 KCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546
+ DV+S+G+ + E++T G P AG + L+ K R +P ID
Sbjct: 215 QSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGERLAQPQICTID--------- 263
Query: 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ + + C +D RP + ++ R+
Sbjct: 264 ------VYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 57/214 (26%)
Query: 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTV-----------VAVRRL----TEGDATWRFKD 391
++++GK N YK+V G G G TV VA++ + E + T K
Sbjct: 2 SHMIGKIINE-RYKIVDKLGGG-GMSTVYLAEDTILNIKVAIKAIFIPPREKEET--LKR 57
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHGFG----------L 441
FE EV +++ H NIV + +D L+ ++I +L + G
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 442 NRLLPGTSK----------VTKNETIVTSGTGSRI------SAISNVYLAPEARIYGS-- 483
N++L G + ++ S +I A+S L + G+
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 484 ---------KFTQKC-DVYSFGIVLLEILTGRLP 507
+ T +C D+YS GIVL E+L G P
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++A E+ I+ K+T + DV+S+G+ + E++T G P AG + L+ K R +P
Sbjct: 183 WMALES-IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGERLAQP 239
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
ID + + + C +D RP + ++ R+
Sbjct: 240 QICTID---------------VYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 94/256 (36%), Gaps = 49/256 (19%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY-ANDEKL-LISDFI 427
G +VAV+ L ++ E++ + + H +I++ K A L L+ +++
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 428 RNGSL--YAALHGFGLNRLLPGTSKVTK-----------------------NETIVTSGT 462
GSL Y H GL +LL ++ + N+ +V G
Sbjct: 118 PLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD 177
Query: 463 GSRISAISN---------------VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
A+ + APE + KF DV+SFG+ L E+LT
Sbjct: 178 FGLAKAVPEGHEXYRVREDGDSPVFWYAPEC-LKEYKFYYASDVWSFGVTLYELLTHCDS 236
Query: 508 DAGPENDGKGLESLVRKAFRERRPLSEVIDPA--LVKEIHAKRQVLATFHIALNCTELDP 565
P L + + R L+E+++ L + +V +H+ NC E +
Sbjct: 237 SQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPAEV---YHLMKNCWETEA 292
Query: 566 EFRPRMRTVSESLDRV 581
FRP + L V
Sbjct: 293 SFRPTFENLIPILKTV 308
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 45/168 (26%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSL---------------- 432
+D E+E + R QHPNI+ LK Y ++++ ++ G L
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS 119
Query: 433 ---------YAALHGFGL-NRLLPGTSKVTKNET-------IVTSGTGSRISAISNV--- 472
LH G+ +R L ++ + +E+ I G ++ A + +
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 473 ------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA-GPEN 513
++APE + + CD++S G++L +LTG P A GP++
Sbjct: 180 PCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD 226
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 30/187 (16%)
Query: 366 GSGMGAPTVVAVRRLT---------EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
GSG + + +RLT + +R E+E+ + +++H NIV L+ Y +
Sbjct: 18 GSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77
Query: 417 NDEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRI-----SAISN 471
L+ + G L+ +R+L K+ ++V S + + I +
Sbjct: 78 TTHYYLVMQLVSGGELF--------DRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 472 VYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR 530
L PE +Y + + K + FG+ ++ G + G V ++
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGL-------SKMEQNGIMSTACGTPGYVAPEVLAQK 182
Query: 531 PLSEVID 537
P S+ +D
Sbjct: 183 PYSKAVD 189
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 212 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL-KEGTRMRAP 269
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 270 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT---GFLTEYVATRW------Y 193
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
++ Y APE + + Q D++S G ++ E+LTG+
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 216 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 274 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 212 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 269
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 270 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 207 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 265 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 216 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 274 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 207 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 265 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
++ Y APE + + Q D++S G ++ E+LTG+
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 193
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 207 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 265 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL ++ E EV + ++HPNI+ L + + +
Sbjct: 46 RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 105
Query: 422 LISDFIRNGSLYAAL 436
LI + + G L+ L
Sbjct: 106 LILELVSGGELFDFL 120
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 207 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 264
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 265 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 198
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 199
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 190
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 191
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 201
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 193
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 216 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 274 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 195
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 191
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 216 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 274 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 253 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 310
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 311 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 195
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 216 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 273
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 274 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 218 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 275
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 276 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 213
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 193
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 261 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 318
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 319 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 259 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 316
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 317 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 268 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 325
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 326 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 531
++APE I+ +T + DV+SFG++L EI + G P G + D + L ++ R R P
Sbjct: 266 WMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP 323
Query: 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 578
+ P + + L+C +P RP + E L
Sbjct: 324 --DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 193
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 92 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 151
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + ++AP
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMAP 201
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T+VAV+ L E + DF+ E +A +PNIV+L L+ +++ G L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 92 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 151
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + ++AP
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMAP 201
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 89 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 148
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + ++AP
Sbjct: 149 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMAP 198
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 199 ESLKDGV-FTTSSDMWSFGVVLWEITS 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 507 YAKISDFGLSKALRADENYYKAQTH---------GKWPVKWYAPECINY-YKFSSKSDVW 556
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 557 SFGVLMWEAFSYGQKPYRG 575
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 165 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 214
Query: 493 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527
SFG+++ E + G+ P G + G + +++ K R
Sbjct: 215 SFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER 248
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 165 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 214
Query: 493 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527
SFG+++ E + G+ P G + G + +++ K R
Sbjct: 215 SFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER 248
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 439 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
FGL R K V + TG+++ ++A E+ + KFT K DV+SFG++L
Sbjct: 176 FGLAR-----DMYDKEXXSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLL 226
Query: 499 LEILTGRLP 507
E++T P
Sbjct: 227 WELMTRGAP 235
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 508 YAKISDFGLSKALRADENYYKAQTH---------GKWPVKWYAPECINY-YKFSSKSDVW 557
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 558 SFGVLMWEAFSYGQKPYRG 576
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 485 FTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543
+T DV++FG+ + EI+T G+ P AG EN + + + R ++P P ++E
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRLKQP------PECMEE 267
Query: 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581
+ + + C DP+ RP + L+ +
Sbjct: 268 V---------YDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 163 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 212
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 213 SFGVLMWEAFSYGQKPYRG 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 44/195 (22%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 159 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 212
Query: 410 LKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLLPGTSKV 451
+ Y DE ++ +F+ G+L A L + +
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 452 TKNETIVTSGTG------------------SRISAISNVY-LAPEARIYGSKFTQKCDVY 492
K+++I+ + G R + Y +APE I + + D++
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIW 331
Query: 493 SFGIVLLEILTGRLP 507
S GI+++E++ G P
Sbjct: 332 SLGIMVIEMVDGEPP 346
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 145 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 194
Query: 493 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527
SFG+++ E + G+ P G + G + +++ K R
Sbjct: 195 SFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 143 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 192
Query: 493 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 527
SFG+++ E + G+ P G + G + +++ K R
Sbjct: 193 SFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 44/216 (20%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G +VV+ G + AV+ + + + E+E+ + +++H NIV L+ Y
Sbjct: 33 GAFSEVVLAEEKATG--KLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 416 ANDEKLLISDFIRNGSLY-------------------------AALHGFGL--NRLLPGT 448
+ + L+ + G L+ LH G+ L P
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPEN 150
Query: 449 ----SKVTKNETIVTSGTGSRISAISNV---------YLAPEARIYGSKFTQKCDVYSFG 495
S+ +++ +++ S++ +V Y+APE + +++ D +S G
Sbjct: 151 LLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEV-LAQKPYSKAVDCWSIG 209
Query: 496 IVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531
++ +L G P END K E +++ + P
Sbjct: 210 VIAYILLCG-YPPFYDENDSKLFEQILKAEYEFDSP 244
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 155 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 204
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 205 SFGVLMWEAFSYGQKPYRG 223
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 149 YAKISDFGLSKALRADENYYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 198
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 199 SFGVLMWEAFSYGQKPYRG 217
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T +T +R Y
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT---GFLTEYVATRW------Y 195
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 204 WMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 334 GFSLELEDLLRASAYVV----GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF 389
G L E+L S Y + GK ++ + V A ++ ++L+ D
Sbjct: 10 GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD----H 65
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+ E E ++HPNIVRL LI D + G L+
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 109
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 201 WMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 433 YAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 492
YA + FGL++ L K +T + APE Y KF+ K DV+
Sbjct: 149 YAKISDFGLSKALRADENXYKAQTHGKWPVK---------WYAPECINY-YKFSSKSDVW 198
Query: 493 SFGIVLLEILT-GRLPDAG 510
SFG+++ E + G+ P G
Sbjct: 199 SFGVLMWEAFSYGQKPYRG 217
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQ 173
+LV L+L N G P+ + ++ + L L L TLNL NQ
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLK-TLNLYDNQ 113
Query: 174 FSGQIPEMYGHFPVMVSLDLRNN--NLSGEIPQVGSLLNQGPTAFSGNPGLCGFP 226
S +P + H + SL+L +N N + + L + + +G CG P
Sbjct: 114 ISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRK--KSLNGGAARCGAP 166
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL 436
++ E EV + +V HPNI+ L Y + +LI + + G L+ L
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 484 KFTQKCDVYSFGIVLLEILTGRLP 507
KFT K DV+SFG++L E++T P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 44/195 (22%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 82 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 135
Query: 410 LKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLLPGTSKV 451
+ Y DE ++ +F+ G+L A L + +
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 452 TKNETIVTSGTG------------------SRISAISNVY-LAPEARIYGSKFTQKCDVY 492
K+++I+ + G R + Y +APE I + + D++
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIW 254
Query: 493 SFGIVLLEILTGRLP 507
S GI+++E++ G P
Sbjct: 255 SLGIMVIEMVDGEPP 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 457 IVTSGTGSRISAISNV-----YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510
I ++ T +++ + N Y APE R S T + D+Y+ VL E LTG P G
Sbjct: 180 IASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 473 YLAPEARIYGSKFTQ----KCDVYSFGIVLLEILTGRLP 507
Y+APE RI S Q + DV+S GI L E+ TGR P
Sbjct: 191 YMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHG 438
EV +A ++HPNIV+ + + N ++ D+ G L+ ++
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + + D++S G ++ E+LTGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 92 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 151
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T+ K G G + ++AP
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKG------GKG----LLPVRWMAP 201
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 384 DATWRFKDFESEVEAIARVQHPNIVR--LKAFYYANDEK--LLISDFIRNGSLYAALHGF 439
D WR F +EA++ + I+ LK DE + I DF +++ +L
Sbjct: 116 DEYWRL--FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 440 GLN-RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 498
L+ + LPG+S +TS G+ + Y+A E + +K D+YS GI+
Sbjct: 174 KLDSQNLPGSSDN------LTSAIGTAM------YVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 499 LEIL 502
E++
Sbjct: 222 FEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 19/126 (15%)
Query: 382 EGDATWRFKDFESEVEAIARVQHPNIVR--LKAFYYANDEK--LLISDFIRNGSLYAALH 437
+ D WR F +EA++ + I+ LK DE + I DF +++ +L
Sbjct: 114 QRDEYWRL--FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 438 GFGLN-RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 496
L+ + LPG+S +TS G+ + Y+A E + +K D+YS GI
Sbjct: 172 ILKLDSQNLPGSSDN------LTSAIGTAM------YVATEVLDGTGHYNEKIDMYSLGI 219
Query: 497 VLLEIL 502
+ E++
Sbjct: 220 IFFEMI 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 318 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 315 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 529
S Y APE S + DV+S GI+L ++ G LP D + +L +K R +
Sbjct: 172 SLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP-----FDDDNVMALYKKIMRGK 226
Query: 530 RPLSEVIDPALVKEIHAKRQV 550
+ + + P+ + + QV
Sbjct: 227 YDVPKWLSPSSILLLQQMLQV 247
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T + +R Y
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLXEXVATRW------Y 197
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 17/152 (11%)
Query: 362 VVGRGSGMGAPT------VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
++G + APT V V+ L E D K + I + + LK +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 416 AN--DEKLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 473
AN L S+ + N + + FGL R+ T + +R Y
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLXEXVATRW------Y 198
Query: 474 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
APE + +T+ D++S G +L E+L+ R
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 91 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 150
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + ++AP
Sbjct: 151 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK------GGKG----LLPVRWMAP 200
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 201 ESLKDGV-FTTSSDMWSFGVVLWEITS 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 36/57 (63%), Gaps = 8/57 (14%)
Query: 365 RGSGMGAPTVVAVRRLTEGDATWRFKDFESEV-EAIARVQHPNIVRLKAFYYANDEK 420
+ +GM VA++++ + RF++ E ++ + +A + HPNIV+L++++Y E+
Sbjct: 45 KSTGMS----VAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLISDFIRNGS 431
V V+ L E D K + + I + + LK + AN L S+ + N +
Sbjct: 121 VYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT 180
Query: 432 LYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 491
+ FGL R+ T +T +R Y APE + +T+ D+
Sbjct: 181 CDLKICDFGLARIADPEHDHT---GFLTEXVATRW------YRAPEIMLNSKGYTKSIDI 231
Query: 492 YSFGIVLLEILTGR 505
+S G +L E+L+ R
Sbjct: 232 WSVGCILAEMLSNR 245
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + + + P++ ++ Y N K
Sbjct: 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 159
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 209
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 210 ESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 37 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 90
Query: 410 LKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLLPGTSKV 451
+ Y DE ++ +F+ G+L A L + +
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 452 TKNETIVTSGTG----SRISAISNV---------------YLAPEARIYGSKFTQKCDVY 492
K+++I+ + G S + V ++APE I + + D++
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIW 209
Query: 493 SFGIVLLEILTGRLP 507
S GI+++E++ G P
Sbjct: 210 SLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 39 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 92
Query: 410 LKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLLPGTSKV 451
+ Y DE ++ +F+ G+L A L + +
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 452 TKNETIVTSGTG----SRISAISNV---------------YLAPEARIYGSKFTQKCDVY 492
K+++I+ + G S + V ++APE I + + D++
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIW 211
Query: 493 SFGIVLLEILTGRLP 507
S GI+++E++ G P
Sbjct: 212 SLGIMVIEMVDGEPP 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 176 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 233
Query: 533 S 533
S
Sbjct: 234 S 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + + GD + E E P + + Y N +K
Sbjct: 92 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 151
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + ++AP
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMAP 201
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT D++SFG+VL EI +
Sbjct: 202 ESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 45/206 (21%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G + + T+ + T K F EV + + HPNIV+L
Sbjct: 30 KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKT 88
Query: 420 KLLISDFIRNGSLYAALHGFGLNRLLPGTSKV-------------------TKNETIVTS 460
LI ++ G ++ L G + SK K E ++
Sbjct: 89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 148
Query: 461 G----------------TGSRISAISNV--YLAPEARIYGSKFTQ-KCDVYSFGIVLLEI 501
G ++ A Y APE G K+ + DV+S G++L +
Sbjct: 149 ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTL 207
Query: 502 LTGRLPDAGPENDGKGLESLVRKAFR 527
++G LP DG+ L+ L + R
Sbjct: 208 VSGSLP-----FDGQNLKELRERVLR 228
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 45/168 (26%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSL---------------- 432
+D E+E + R QHPNI+ LK Y ++++ + G L
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS 119
Query: 433 ---------YAALHGFGL-NRLLPGTSKVTKNET-------IVTSGTGSRISAISNV--- 472
LH G+ +R L ++ + +E+ I G ++ A + +
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 473 ------YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA-GPEN 513
++APE + + CD++S G++L LTG P A GP++
Sbjct: 180 PCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDD 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 228
Query: 533 S 533
S
Sbjct: 229 S 229
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 28 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 81
Query: 410 LKAFYYANDEKLLISDFIRNGSL------------------YAALHGFGLNRLLPGTSKV 451
+ Y DE ++ +F+ G+L A L + +
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 452 TKNETIVTSGTG----SRISAISNV---------------YLAPEARIYGSKFTQKCDVY 492
K+++I+ + G S + V ++APE I + + D++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIW 200
Query: 493 SFGIVLLEILTGRLP 507
S GI+++E++ G P
Sbjct: 201 SLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 32 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 85
Query: 410 LKAFYYANDEKLLISDFIRNGSL 432
+ Y DE ++ +F+ G+L
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGAL 108
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 74/206 (35%), Gaps = 45/206 (21%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G + + T+ + T K F EV + + HPNIV+L
Sbjct: 27 KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKT 85
Query: 420 KLLISDFIRNGSLYAALHGFGLNRLLPGTSKVTKNETIVTSGTGSRI------------S 467
LI ++ G ++ L G + SK + + V RI
Sbjct: 86 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 145
Query: 468 AISNV-------------------------YLAPEARIYGSKFTQ-KCDVYSFGIVLLEI 501
A N+ Y APE G K+ + DV+S G++L +
Sbjct: 146 ADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTL 204
Query: 502 LTGRLPDAGPENDGKGLESLVRKAFR 527
++G LP DG+ L+ L + R
Sbjct: 205 VSGSLP-----FDGQNLKELRERVLR 225
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 228
Query: 533 S 533
S
Sbjct: 229 S 229
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 228
Query: 533 S 533
S
Sbjct: 229 S 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 177 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 228
Query: 533 S 533
S
Sbjct: 229 S 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 176 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 171 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 228
Query: 533 S 533
S
Sbjct: 229 S 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL 532
YLAPE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R L
Sbjct: 174 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTL 231
Query: 533 S 533
S
Sbjct: 232 S 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507
YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 175 YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 24/147 (16%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRL--------KAFYYANDEKL 421
G PT+V + +T GD + + + P++ ++ Y N K
Sbjct: 90 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 149
Query: 422 LISDFIRNGSLYA-----ALHGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 476
+ D + A + FG+ R + T K G G + +++P
Sbjct: 150 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMSP 199
Query: 477 EARIYGSKFTQKCDVYSFGIVLLEILT 503
E+ G FT DV+SFG+VL EI T
Sbjct: 200 ESLKDGV-FTTYSDVWSFGVVLWEIAT 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y APE + +T+ D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 45/206 (21%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ + T K F EV + + HPNIV+L
Sbjct: 30 KVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKT 88
Query: 420 KLLISDFIRNGSLYAALHGFGLNRLLPGTSKV-------------------TKNETIVTS 460
L+ ++ G ++ L G + +K K E ++
Sbjct: 89 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLD 148
Query: 461 G----------------TGSRISAI--SNVYLAPEARIYGSKFTQ-KCDVYSFGIVLLEI 501
G G+++ S Y APE G K+ + DV+S G++L +
Sbjct: 149 GDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTL 207
Query: 502 LTGRLPDAGPENDGKGLESLVRKAFR 527
++G LP DG+ L+ L + R
Sbjct: 208 VSGSLP-----FDGQNLKELRERVLR 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 463 GSRISAISNV--YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 519
G+++ A Y APE G K+ + DV+S G++L +++G LP DG+ L+
Sbjct: 166 GNKLDAFCGAPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLK 219
Query: 520 SLVRKAFR 527
L + R
Sbjct: 220 ELRERVLR 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 463 GSRISAISNV--YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 519
G+++ A Y APE G K+ + DV+S G++L +++G LP DG+ L+
Sbjct: 166 GNKLDAFCGAPPYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLK 219
Query: 520 SLVRKAFR 527
L + R
Sbjct: 220 ELRERVLR 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y AP+ + K++ D++S G + E++TG+
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 473 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 505
Y AP+ + K++ D++S G + E++TG+
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 473 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 178 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 473 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 178 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 473 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 178 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 473 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 178 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 473 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 171 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,925,819
Number of Sequences: 62578
Number of extensions: 653232
Number of successful extensions: 2754
Number of sequences better than 100.0: 618
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 2024
Number of HSP's gapped (non-prelim): 903
length of query: 584
length of database: 14,973,337
effective HSP length: 104
effective length of query: 480
effective length of database: 8,465,225
effective search space: 4063308000
effective search space used: 4063308000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)