Query 007935
Match_columns 584
No_of_seqs 713 out of 5376
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 2.9E-42 9.8E-47 342.0 18.4 218 346-582 30-305 (308)
2 4aoj_A High affinity nerve gro 100.0 1.7E-41 5.9E-46 339.7 20.6 218 346-583 45-319 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 9.9E-42 3.4E-46 336.7 18.4 217 346-582 17-288 (299)
4 3omv_A RAF proto-oncogene seri 100.0 8.5E-41 2.9E-45 330.0 20.1 216 346-583 40-300 (307)
5 3fpq_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 318.1 19.8 206 347-576 31-282 (290)
6 4b9d_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 326.9 18.1 206 347-576 29-276 (350)
7 3hmm_A TGF-beta receptor type- 100.0 5.9E-40 2E-44 326.2 16.3 223 347-584 8-298 (303)
8 4fih_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 326.6 17.2 204 348-576 80-323 (346)
9 4ase_A Vascular endothelial gr 100.0 2.5E-39 8.6E-44 326.5 17.8 219 346-581 68-345 (353)
10 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-39 5.2E-44 324.1 15.1 205 347-581 63-314 (336)
11 3hyh_A Carbon catabolite-derep 100.0 9.1E-39 3.1E-43 310.4 19.5 206 347-576 18-262 (275)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-39 6.1E-44 319.7 14.3 206 346-575 36-283 (311)
13 4fie_A Serine/threonine-protei 100.0 8.7E-39 3E-43 327.4 18.5 205 347-576 156-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-38 6.3E-43 312.5 13.2 208 347-575 29-280 (304)
15 4g31_A Eukaryotic translation 100.0 1.1E-36 3.7E-41 301.2 14.7 205 347-576 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.3E-34 4.5E-39 297.2 18.3 219 347-576 59-344 (398)
17 3v5w_A G-protein coupled recep 100.0 2.6E-34 8.9E-39 307.4 17.1 210 346-575 193-448 (689)
18 4f9c_A Cell division cycle 7-r 100.0 8.4E-34 2.9E-38 288.1 17.2 160 347-511 26-250 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 2.1E-33 7.2E-38 302.4 19.0 209 347-576 162-410 (573)
20 3zgw_A Maternal embryonic leuc 100.0 3.7E-32 1.3E-36 275.5 18.8 207 347-576 15-260 (347)
21 3s95_A LIMK-1, LIM domain kina 100.0 4E-32 1.4E-36 272.1 18.3 215 347-583 15-282 (310)
22 2qkw_B Protein kinase; three-h 100.0 2.9E-32 9.8E-37 274.5 17.1 226 347-582 44-314 (321)
23 3fe3_A MAP/microtubule affinit 100.0 5.7E-32 1.9E-36 272.5 18.9 207 347-576 20-264 (328)
24 3p86_A Serine/threonine-protei 100.0 1.1E-31 3.8E-36 268.4 20.3 212 346-583 41-298 (309)
25 3uim_A Brassinosteroid insensi 100.0 2.6E-32 9E-37 275.4 13.6 236 337-581 20-309 (326)
26 3soc_A Activin receptor type-2 100.0 5.5E-32 1.9E-36 272.5 14.8 223 346-583 28-318 (322)
27 3cbl_A C-FES, proto-oncogene t 100.0 4.2E-32 1.4E-36 279.4 13.6 214 346-583 118-374 (377)
28 3kul_A Ephrin type-A receptor 100.0 1.8E-31 6.1E-36 269.0 17.3 216 346-582 53-312 (325)
29 4hcu_A Tyrosine-protein kinase 100.0 5.3E-31 1.8E-35 258.2 19.6 210 347-583 15-266 (269)
30 2psq_A Fibroblast growth facto 100.0 3.1E-31 1.1E-35 272.0 18.6 218 346-582 85-363 (370)
31 3fxz_A Serine/threonine-protei 100.0 3.5E-31 1.2E-35 263.3 18.2 206 347-576 25-269 (297)
32 2nru_A Interleukin-1 receptor- 100.0 5.8E-31 2E-35 263.2 19.0 224 348-583 37-306 (307)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 6E-31 2E-35 257.7 18.5 211 347-584 13-265 (268)
34 3l9p_A Anaplastic lymphoma kin 100.0 3.2E-31 1.1E-35 271.6 16.7 218 347-583 76-345 (367)
35 3tki_A Serine/threonine-protei 100.0 2.8E-31 9.7E-36 267.2 15.2 210 347-576 12-261 (323)
36 3kmu_A ILK, integrin-linked ki 100.0 5.9E-31 2E-35 258.0 16.9 212 347-584 15-271 (271)
37 1luf_A Muscle-specific tyrosin 100.0 1.2E-30 4E-35 265.2 19.4 218 347-583 52-335 (343)
38 2c30_A Serine/threonine-protei 100.0 1E-30 3.6E-35 262.9 18.8 205 347-576 50-294 (321)
39 2qol_A Ephrin receptor; recept 100.0 3.9E-31 1.3E-35 271.5 15.9 216 346-582 49-308 (373)
40 1o6l_A RAC-beta serine/threoni 100.0 1.3E-30 4.6E-35 263.3 19.5 206 347-576 10-260 (337)
41 4eqm_A Protein kinase; transfe 100.0 9.5E-31 3.2E-35 259.9 18.0 216 347-582 16-274 (294)
42 3vhe_A Vascular endothelial gr 100.0 7.3E-31 2.5E-35 268.5 17.7 220 346-582 26-354 (359)
43 3poz_A Epidermal growth factor 100.0 1.9E-30 6.7E-35 261.7 19.1 216 347-582 20-277 (327)
44 2yab_A Death-associated protei 100.0 1.7E-30 5.9E-35 264.9 18.7 210 347-576 17-272 (361)
45 1qcf_A Haematopoetic cell kina 100.0 1.5E-30 5.1E-35 274.4 18.8 210 346-583 192-444 (454)
46 3dtc_A Mitogen-activated prote 100.0 9.1E-31 3.1E-35 256.8 16.0 209 347-581 12-271 (271)
47 3q4u_A Activin receptor type-1 100.0 1.4E-30 4.7E-35 259.6 17.3 218 347-581 13-300 (301)
48 1k9a_A Carboxyl-terminal SRC k 100.0 2E-30 6.9E-35 273.0 19.3 210 346-583 197-445 (450)
49 3soa_A Calcium/calmodulin-depe 100.0 4.1E-30 1.4E-34 269.0 21.4 206 347-576 16-267 (444)
50 3gen_A Tyrosine-protein kinase 100.0 2.4E-30 8.1E-35 255.5 18.4 210 347-583 29-280 (283)
51 1tki_A Titin; serine kinase, m 100.0 1.6E-30 5.5E-35 261.4 17.4 208 347-576 10-257 (321)
52 4euu_A Serine/threonine-protei 100.0 4.6E-30 1.6E-34 258.1 20.6 229 347-581 14-307 (319)
53 2bdw_A Hypothetical protein K1 100.0 2.5E-30 8.6E-35 264.3 18.8 207 346-576 33-284 (362)
54 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-30 4.3E-35 277.6 17.0 212 346-582 224-477 (495)
55 1mp8_A Focal adhesion kinase 1 100.0 2.2E-30 7.4E-35 255.6 17.3 216 346-583 19-276 (281)
56 4dc2_A Protein kinase C IOTA t 100.0 3.5E-30 1.2E-34 265.1 19.4 207 346-571 56-307 (396)
57 2eva_A TAK1 kinase - TAB1 chim 100.0 2.9E-30 1E-34 258.0 18.3 208 347-583 13-263 (307)
58 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-30 7.6E-35 259.7 17.4 220 346-583 27-311 (314)
59 1fot_A TPK1 delta, CAMP-depend 100.0 3.6E-30 1.2E-34 258.2 18.7 206 347-576 11-258 (318)
60 4f0f_A Serine/threonine-protei 100.0 2.6E-30 8.8E-35 255.9 17.1 212 347-581 24-287 (287)
61 4fvq_A Tyrosine-protein kinase 100.0 2E-30 7E-35 256.8 16.4 217 347-582 13-274 (289)
62 2y0a_A Death-associated protei 100.0 3.8E-30 1.3E-34 259.4 18.4 211 346-576 15-271 (326)
63 4fr4_A YANK1, serine/threonine 100.0 4E-30 1.4E-34 263.7 18.7 209 347-575 20-270 (384)
64 3niz_A Rhodanese family protei 100.0 3.5E-30 1.2E-34 257.9 17.8 220 347-576 26-300 (311)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-30 6.4E-35 263.9 15.7 206 347-576 28-280 (353)
66 3c0i_A Peripheral plasma membr 100.0 3.5E-30 1.2E-34 262.4 17.8 210 346-576 28-286 (351)
67 3t9t_A Tyrosine-protein kinase 100.0 6.7E-30 2.3E-34 250.0 19.1 210 347-583 13-264 (267)
68 3lb7_A RAF proto-oncogene seri 100.0 4.2E-30 1.4E-34 256.8 18.0 215 346-583 40-300 (307)
69 2x4f_A Myosin light chain kina 100.0 3.3E-30 1.1E-34 264.4 17.6 209 347-576 94-342 (373)
70 2i1m_A Macrophage colony-stimu 100.0 3E-30 1E-34 261.2 16.8 220 346-582 50-325 (333)
71 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.4E-30 1.5E-34 270.6 18.7 209 346-582 188-439 (452)
72 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-30 4.9E-35 265.0 14.4 208 347-576 58-305 (349)
73 3tt0_A Basic fibroblast growth 100.0 6.1E-30 2.1E-34 263.8 19.3 218 346-582 73-351 (382)
74 3a8x_A Protein kinase C IOTA t 100.0 8.7E-30 3E-34 258.4 19.9 206 347-571 14-264 (345)
75 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.2E-31 2.1E-35 265.5 11.4 206 347-576 14-258 (336)
76 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.8E-30 1.6E-34 260.8 17.9 206 347-576 46-293 (350)
77 2zv2_A Calcium/calmodulin-depe 100.0 8.4E-30 2.9E-34 253.6 19.3 207 347-576 18-292 (298)
78 3kex_A Receptor tyrosine-prote 100.0 7.9E-30 2.7E-34 257.1 19.1 216 347-582 18-275 (325)
79 2ozo_A Tyrosine-protein kinase 100.0 8.6E-30 2.9E-34 277.7 20.6 212 348-582 342-597 (613)
80 3ugc_A Tyrosine-protein kinase 100.0 4.9E-30 1.7E-34 254.9 17.1 221 347-583 15-291 (295)
81 1rjb_A FL cytokine receptor; k 100.0 6.2E-30 2.1E-34 260.0 18.0 221 346-583 49-334 (344)
82 3uc3_A Serine/threonine-protei 100.0 6.9E-30 2.4E-34 261.1 18.4 208 347-576 25-274 (361)
83 1xjd_A Protein kinase C, theta 100.0 3.1E-30 1.1E-34 261.3 15.5 205 347-575 22-268 (345)
84 1mqb_A Ephrin type-A receptor 100.0 1.1E-29 3.7E-34 256.9 19.5 216 347-582 49-308 (333)
85 1t46_A HOMO sapiens V-KIT hard 100.0 8.4E-30 2.9E-34 255.4 18.4 220 346-582 27-306 (313)
86 3gxj_A TGF-beta receptor type- 100.0 3.2E-31 1.1E-35 264.4 8.0 221 347-584 8-298 (303)
87 3c1x_A Hepatocyte growth facto 100.0 2.5E-30 8.4E-35 265.2 14.8 216 346-582 93-354 (373)
88 2y94_A 5'-AMP-activated protei 100.0 4.2E-30 1.4E-34 270.7 16.6 207 347-576 21-266 (476)
89 3mdy_A Bone morphogenetic prot 100.0 1.7E-29 5.9E-34 255.9 20.4 220 346-583 41-331 (337)
90 2wqm_A Serine/threonine-protei 100.0 6.5E-30 2.2E-34 255.9 16.7 215 347-583 37-297 (310)
91 3cc6_A Protein tyrosine kinase 100.0 1.3E-29 4.4E-34 250.0 18.2 215 347-582 17-272 (281)
92 3hko_A Calcium/calmodulin-depe 100.0 1.3E-29 4.6E-34 257.7 18.7 212 347-581 31-337 (345)
93 3kn6_A Ribosomal protein S6 ki 100.0 3.7E-30 1.3E-34 259.3 14.3 211 347-576 16-270 (325)
94 2pmi_A Negative RE, cyclin-dep 100.0 7.6E-30 2.6E-34 256.2 16.5 222 347-576 10-293 (317)
95 2eue_A Carbon catabolite derep 100.0 9.6E-30 3.3E-34 250.1 16.8 205 348-576 19-262 (275)
96 3a62_A Ribosomal protein S6 ki 100.0 2.1E-29 7.3E-34 254.0 19.6 209 347-576 22-276 (327)
97 3gni_B Strad alpha; kinase fol 100.0 8.4E-30 2.9E-34 263.6 16.9 161 347-512 30-241 (389)
98 3o0g_A Cell division protein k 100.0 8.7E-30 3E-34 252.7 16.4 221 347-576 7-282 (292)
99 3lzb_A Epidermal growth factor 100.0 1.8E-29 6.3E-34 254.5 19.0 217 347-583 20-278 (327)
100 4ejn_A RAC-alpha serine/threon 100.0 5.7E-30 1.9E-34 269.6 15.7 206 347-576 153-404 (446)
101 3is5_A Calcium-dependent prote 100.0 2.7E-29 9.1E-34 248.3 19.6 205 347-576 27-278 (285)
102 4eut_A Serine/threonine-protei 100.0 7.3E-30 2.5E-34 264.4 16.1 231 347-583 14-309 (396)
103 3fdn_A Serine/threonine-protei 100.0 1.2E-29 4.2E-34 249.9 17.0 206 347-576 14-257 (279)
104 3pls_A Macrophage-stimulating 100.0 1.4E-29 4.9E-34 251.8 17.6 219 346-583 25-287 (298)
105 1kob_A Twitchin; kinase, intra 100.0 1.7E-29 5.8E-34 259.9 18.2 209 347-576 56-304 (387)
106 4fl3_A Tyrosine-protein kinase 100.0 1.7E-29 5.8E-34 276.0 19.3 213 347-582 374-630 (635)
107 1u5q_A Serine/threonine protei 100.0 1.9E-29 6.5E-34 256.4 18.3 206 347-576 59-305 (348)
108 2i0e_A Protein kinase C-beta I 100.0 1.4E-29 4.8E-34 257.3 17.3 201 347-571 25-266 (353)
109 2yex_A Serine/threonine-protei 100.0 1.6E-29 5.4E-34 248.6 17.1 210 347-576 12-261 (276)
110 2pvf_A Fibroblast growth facto 100.0 1.9E-29 6.5E-34 255.3 18.1 218 346-582 39-317 (334)
111 3v8s_A RHO-associated protein 100.0 3.7E-30 1.3E-34 266.3 13.1 207 347-576 74-329 (410)
112 1u59_A Tyrosine-protein kinase 100.0 1.8E-29 6.1E-34 249.8 17.5 213 347-582 15-271 (287)
113 2r5t_A Serine/threonine-protei 100.0 8E-30 2.7E-34 261.0 15.4 206 347-576 43-289 (373)
114 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-29 4.1E-34 272.6 17.3 209 346-582 271-522 (535)
115 3f66_A Hepatocyte growth facto 100.0 1.7E-29 5.9E-34 251.3 17.2 217 346-583 29-291 (298)
116 2a2a_A Death-associated protei 100.0 3.8E-29 1.3E-33 251.6 19.6 211 346-576 16-272 (321)
117 3qup_A Tyrosine-protein kinase 100.0 1.7E-29 6E-34 254.3 17.2 217 346-583 27-298 (323)
118 2xir_A Vascular endothelial gr 100.0 2.6E-29 9E-34 252.1 18.3 219 346-582 31-309 (316)
119 3ork_A Serine/threonine protei 100.0 5.6E-30 1.9E-34 256.5 13.3 215 347-581 17-279 (311)
120 2rku_A Serine/threonine-protei 100.0 2.8E-29 9.5E-34 249.4 18.3 206 347-576 20-265 (294)
121 1fvr_A Tyrosine-protein kinase 100.0 1.9E-29 6.6E-34 254.5 17.4 214 346-583 29-300 (327)
122 3kfa_A Tyrosine-protein kinase 100.0 1.4E-29 4.6E-34 250.7 15.9 212 346-582 17-270 (288)
123 2ac3_A MAP kinase-interacting 100.0 3E-29 1E-33 251.7 18.7 215 347-576 18-295 (316)
124 1b6c_B TGF-B superfamily recep 100.0 4.3E-29 1.5E-33 253.6 19.9 222 346-584 46-337 (342)
125 2owb_A Serine/threonine-protei 100.0 2.3E-29 7.8E-34 254.8 17.7 206 347-576 46-291 (335)
126 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-29 3.9E-34 251.5 15.1 216 347-584 29-289 (289)
127 3qd2_B Eukaryotic translation 100.0 1.1E-29 3.6E-34 256.8 15.2 205 347-576 11-325 (332)
128 4aw2_A Serine/threonine-protei 100.0 6.5E-30 2.2E-34 266.5 13.8 207 347-576 79-338 (437)
129 2h34_A Serine/threonine-protei 100.0 5.7E-29 1.9E-33 249.0 20.0 215 347-582 39-295 (309)
130 2yfx_A Tyrosine-protein kinase 100.0 2.1E-29 7.3E-34 254.2 17.0 218 347-583 35-304 (327)
131 2izr_A Casein kinase I isoform 100.0 1.6E-29 5.4E-34 255.5 15.8 215 347-582 14-280 (330)
132 1xbb_A Tyrosine-protein kinase 100.0 3.1E-29 1.1E-33 248.6 17.7 212 348-582 23-278 (291)
133 3kk8_A Calcium/calmodulin depe 100.0 5E-29 1.7E-33 246.1 18.9 206 347-576 11-261 (284)
134 1p4o_A Insulin-like growth fac 100.0 2.1E-29 7.2E-34 253.6 16.5 218 346-582 29-298 (322)
135 3i6u_A CDS1, serine/threonine- 100.0 1.2E-29 4.1E-34 264.6 15.0 211 347-576 140-399 (419)
136 3oz6_A Mitogen-activated prote 100.0 5.8E-30 2E-34 264.6 12.5 158 347-510 14-233 (388)
137 1ob3_A PFPK5, cell division co 100.0 1.6E-29 5.6E-34 250.2 15.2 222 347-576 7-280 (288)
138 3ttj_A Mitogen-activated prote 100.0 2.1E-29 7.3E-34 265.7 16.9 219 347-576 67-355 (464)
139 4e5w_A Tyrosine-protein kinase 100.0 2.7E-29 9.1E-34 250.4 16.7 221 347-582 26-301 (302)
140 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.2E-29 1.1E-33 267.1 18.2 205 347-571 190-438 (543)
141 1nxk_A MAP kinase-activated pr 100.0 3.6E-29 1.2E-33 259.2 17.9 206 347-576 67-321 (400)
142 2buj_A Serine/threonine-protei 100.0 1.6E-29 5.5E-34 253.9 14.8 216 347-583 34-306 (317)
143 2acx_A G protein-coupled recep 100.0 2.3E-29 7.9E-34 268.7 16.7 210 347-576 189-444 (576)
144 4agu_A Cyclin-dependent kinase 100.0 5.2E-29 1.8E-33 249.4 18.3 223 347-576 8-284 (311)
145 1csn_A Casein kinase-1; phosph 100.0 4.2E-29 1.4E-33 248.4 17.5 214 347-582 15-282 (298)
146 1t4h_A Serine/threonine-protei 100.0 9.5E-29 3.2E-33 245.0 19.8 206 347-576 31-282 (290)
147 3f3z_A Calcium/calmodulin-depe 100.0 9.3E-29 3.2E-33 243.3 19.6 208 347-576 14-261 (277)
148 2jam_A Calcium/calmodulin-depe 100.0 9.6E-29 3.3E-33 246.7 19.7 209 347-576 14-261 (304)
149 3lij_A Calcium/calmodulin depe 100.0 5.1E-29 1.7E-33 265.7 18.8 209 347-576 42-291 (494)
150 3a7i_A MST3 kinase, serine/thr 100.0 7.7E-29 2.6E-33 247.3 18.8 206 347-576 27-270 (303)
151 2vgo_A Serine/threonine-protei 100.0 5.6E-29 1.9E-33 245.8 17.5 206 347-576 19-262 (284)
152 2h6d_A 5'-AMP-activated protei 100.0 6.3E-29 2.2E-33 244.3 17.8 207 347-576 16-261 (276)
153 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-29 4.9E-34 254.4 12.9 222 347-583 36-310 (318)
154 2vd5_A DMPK protein; serine/th 100.0 1.3E-29 4.4E-34 262.5 12.9 206 347-576 66-327 (412)
155 3eqc_A Dual specificity mitoge 100.0 7.7E-29 2.6E-33 253.6 18.6 158 347-510 38-232 (360)
156 1qpc_A LCK kinase; alpha beta 100.0 7.4E-29 2.5E-33 244.3 17.7 208 347-582 18-268 (279)
157 1byg_A CSK, protein (C-termina 100.0 5.1E-29 1.7E-33 245.4 16.3 209 346-583 25-273 (278)
158 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-29 8.6E-34 254.7 14.2 208 347-576 27-277 (342)
159 3bhy_A Death-associated protei 100.0 1.2E-28 4E-33 243.3 18.7 216 347-582 10-273 (283)
160 3op5_A Serine/threonine-protei 100.0 1.9E-29 6.3E-34 258.5 13.3 227 347-582 40-328 (364)
161 3cok_A Serine/threonine-protei 100.0 2.2E-29 7.7E-34 247.9 13.1 206 347-576 16-262 (278)
162 3lm5_A Serine/threonine-protei 100.0 7.3E-29 2.5E-33 250.2 17.0 211 346-576 33-287 (327)
163 2w5a_A Serine/threonine-protei 100.0 9.2E-29 3.1E-33 243.6 17.1 209 347-579 11-270 (279)
164 2j0j_A Focal adhesion kinase 1 100.0 9.1E-29 3.1E-33 271.3 18.8 216 346-583 394-651 (656)
165 3dls_A PAS domain-containing s 100.0 2.9E-29 1E-33 253.8 13.8 201 347-576 29-274 (335)
166 3mtl_A Cell division protein k 100.0 2.2E-29 7.6E-34 253.7 12.5 222 347-576 7-281 (324)
167 3brb_A Proto-oncogene tyrosine 100.0 1.2E-28 4E-33 247.1 17.7 217 346-583 38-308 (313)
168 3mwu_A Calmodulin-domain prote 100.0 1.4E-28 4.7E-33 261.9 19.2 205 347-576 27-276 (486)
169 2clq_A Mitogen-activated prote 100.0 8.7E-29 3E-33 245.8 16.6 208 347-576 27-278 (295)
170 4aaa_A Cyclin-dependent kinase 100.0 6.9E-29 2.4E-33 250.9 16.0 223 347-576 30-306 (331)
171 1ogq_A PGIP-2, polygalacturona 100.0 3.1E-29 1.1E-33 251.1 13.0 197 20-220 2-208 (313)
172 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.7E-29 1.3E-33 252.6 13.6 222 347-576 39-318 (329)
173 1cm8_A Phosphorylated MAP kina 100.0 9.4E-29 3.2E-33 253.2 16.5 217 347-576 30-307 (367)
174 3nyv_A Calmodulin-domain prote 100.0 1.1E-28 3.8E-33 262.6 17.5 205 347-576 31-281 (484)
175 3lxl_A Tyrosine-protein kinase 100.0 7.8E-29 2.7E-33 250.1 15.5 222 346-583 27-303 (327)
176 3q5i_A Protein kinase; CDPK, m 100.0 2.2E-28 7.5E-33 261.4 19.6 209 347-576 41-301 (504)
177 2jii_A Serine/threonine-protei 100.0 4.3E-29 1.5E-33 254.6 13.2 221 347-582 47-335 (352)
178 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-28 6.4E-33 242.3 17.3 205 347-576 16-279 (289)
179 3rgf_A Cyclin-dependent kinase 100.0 1.2E-28 4.2E-33 256.1 16.2 167 339-512 18-240 (405)
180 2ycf_A Serine/threonine-protei 100.0 1.2E-28 4E-33 248.2 15.5 211 347-576 15-274 (322)
181 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-28 4.3E-33 246.6 15.6 203 347-576 62-304 (311)
182 2zmd_A Dual specificity protei 100.0 7.7E-29 2.6E-33 255.9 14.4 205 347-576 61-320 (390)
183 2j7t_A Serine/threonine-protei 100.0 1.7E-28 5.8E-33 244.6 16.3 206 347-576 24-275 (302)
184 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-28 4E-33 251.5 15.4 214 347-576 59-321 (355)
185 2a19_B Interferon-induced, dou 100.0 2.5E-28 8.5E-33 241.0 17.1 204 347-583 16-274 (284)
186 3ll6_A Cyclin G-associated kin 100.0 8.2E-29 2.8E-33 250.8 13.8 210 346-582 32-307 (337)
187 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-28 5.5E-33 270.1 17.1 201 347-571 346-587 (674)
188 2y7j_A Phosphorylase B kinase 100.0 6.7E-28 2.3E-32 246.8 20.6 211 347-576 99-359 (365)
189 2xrw_A Mitogen-activated prote 100.0 3E-28 1E-32 250.0 18.1 218 347-576 30-318 (371)
190 3an0_A Dual specificity mitoge 100.0 1.2E-28 4.2E-33 250.0 15.0 207 347-576 56-310 (340)
191 3dbq_A Dual specificity protei 100.0 7.9E-29 2.7E-33 251.7 13.5 205 347-576 14-273 (343)
192 4hgt_A Casein kinase I isoform 100.0 3.4E-28 1.2E-32 241.6 17.6 213 347-582 14-279 (296)
193 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-28 5.7E-33 247.5 15.6 223 346-584 45-323 (326)
194 2v62_A Serine/threonine-protei 100.0 6.7E-29 2.3E-33 252.4 12.7 225 347-582 42-327 (345)
195 3mi9_A Cell division protein k 100.0 2.8E-28 9.5E-33 248.5 17.1 222 347-576 22-311 (351)
196 1u46_A ACK-1, activated CDC42 100.0 1.9E-28 6.4E-33 242.9 15.3 215 347-583 23-284 (291)
197 3fme_A Dual specificity mitoge 100.0 1.3E-28 4.4E-33 243.9 13.9 207 347-576 12-266 (290)
198 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-28 1.7E-32 240.5 18.1 213 347-582 14-279 (296)
199 3com_A Serine/threonine-protei 100.0 4.4E-28 1.5E-32 243.0 17.8 203 347-576 34-278 (314)
200 3nsz_A CK II alpha, casein kin 100.0 4.9E-28 1.7E-32 244.5 18.2 221 347-576 41-319 (330)
201 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.9E-29 3E-33 248.6 12.6 210 347-583 38-302 (319)
202 4exu_A Mitogen-activated prote 100.0 3.7E-28 1.3E-32 249.4 17.4 219 347-576 47-323 (371)
203 3llt_A Serine/threonine kinase 100.0 1.8E-28 6.1E-33 250.9 14.9 155 347-510 40-261 (360)
204 1phk_A Phosphorylase kinase; g 100.0 6.3E-28 2.2E-32 240.0 17.6 211 347-576 22-283 (298)
205 2wtk_C Serine/threonine-protei 100.0 5.2E-28 1.8E-32 241.4 17.0 206 347-576 10-263 (305)
206 2vwi_A Serine/threonine-protei 100.0 1.1E-28 3.7E-33 246.1 11.4 215 347-576 20-287 (303)
207 2fst_X Mitogen-activated prote 100.0 3.1E-28 1.1E-32 249.1 15.0 219 347-576 34-311 (367)
208 2r3i_A Cell division protein k 100.0 1.2E-27 4E-32 238.1 18.6 221 347-576 8-283 (299)
209 2pml_X PFPK7, Ser/Thr protein 100.0 4.3E-28 1.5E-32 246.8 15.4 219 347-576 36-322 (348)
210 3g33_A Cell division protein k 100.0 4.3E-28 1.5E-32 242.4 15.1 220 347-576 14-296 (308)
211 3qyz_A Mitogen-activated prote 100.0 7.4E-28 2.5E-32 246.6 17.0 222 347-576 32-313 (364)
212 1zy4_A Serine/threonine-protei 100.0 5.8E-28 2E-32 240.6 15.7 207 347-576 11-283 (303)
213 1ua2_A CAK, cell division prot 100.0 3.6E-28 1.2E-32 247.2 14.4 222 347-576 15-291 (346)
214 3g2f_A Bone morphogenetic prot 100.0 3.6E-28 1.2E-32 246.2 14.3 220 347-582 18-317 (336)
215 3n9x_A Phosphotransferase; mal 100.0 6.7E-28 2.3E-32 252.4 16.5 157 347-509 31-253 (432)
216 3e3p_A Protein kinase, putativ 100.0 3.3E-28 1.1E-32 248.9 13.8 222 347-576 28-314 (360)
217 3rp9_A Mitogen-activated prote 100.0 4.6E-28 1.6E-32 256.0 15.3 152 347-504 58-280 (458)
218 4e7w_A Glycogen synthase kinas 100.0 8.4E-28 2.9E-32 248.6 16.5 218 346-576 44-321 (394)
219 2b9h_A MAP kinase FUS3, mitoge 100.0 9.2E-28 3.1E-32 244.9 16.3 222 347-576 16-305 (353)
220 3coi_A Mitogen-activated prote 100.0 2.1E-27 7.2E-32 242.2 19.0 217 347-576 29-305 (353)
221 1j1b_A Glycogen synthase kinas 99.9 7.1E-28 2.4E-32 251.2 15.6 217 347-576 59-336 (420)
222 2x7f_A TRAF2 and NCK-interacti 99.9 2E-27 6.9E-32 239.5 17.9 205 347-576 29-286 (326)
223 2wei_A Calmodulin-domain prote 99.9 3.1E-27 1.1E-31 233.7 18.7 210 347-581 27-283 (287)
224 3uqc_A Probable conserved tran 99.9 3.3E-28 1.1E-32 240.3 11.6 202 348-583 37-265 (286)
225 3byv_A Rhoptry kinase; malaria 99.9 1.4E-28 4.8E-33 253.2 8.6 206 347-581 78-366 (377)
226 3kvw_A DYRK2, dual specificity 99.9 2.2E-27 7.4E-32 248.2 17.5 156 347-511 102-302 (429)
227 3e7e_A HBUB1, BUB1A, mitotic c 99.9 8.3E-28 2.8E-32 246.4 13.2 208 347-581 70-337 (365)
228 2i6l_A Mitogen-activated prote 99.9 2.5E-27 8.7E-32 238.0 16.5 218 347-576 16-305 (320)
229 1wak_A Serine/threonine-protei 99.9 1.5E-27 5.2E-32 247.3 15.1 221 347-576 42-391 (397)
230 3eb0_A Putative uncharacterize 99.9 3E-27 1E-31 243.8 17.1 217 347-576 12-321 (383)
231 3aln_A Dual specificity mitoge 99.9 1.5E-27 5.1E-32 240.6 14.2 211 347-576 27-285 (327)
232 3q60_A ROP5B; pseudokinase, tr 99.9 4.8E-28 1.6E-32 248.7 10.5 212 346-576 66-352 (371)
233 3sv0_A Casein kinase I-like; t 99.9 6.7E-27 2.3E-31 246.8 18.6 216 347-582 12-277 (483)
234 3pg1_A Mitogen-activated prote 99.9 3.5E-27 1.2E-31 241.5 15.6 216 347-576 27-316 (362)
235 2rio_A Serine/threonine-protei 99.9 4.3E-27 1.5E-31 246.4 16.5 206 347-576 20-295 (434)
236 2dyl_A Dual specificity mitoge 99.9 4.4E-27 1.5E-31 236.1 14.8 207 347-576 30-283 (318)
237 2iwi_A Serine/threonine-protei 99.9 3.8E-27 1.3E-31 236.0 13.2 201 347-576 36-283 (312)
238 3a99_A Proto-oncogene serine/t 99.9 3.2E-27 1.1E-31 237.4 12.6 201 347-576 48-293 (320)
239 1z57_A Dual specificity protei 99.9 8.4E-27 2.9E-31 236.1 15.7 225 347-582 19-336 (339)
240 3cek_A Dual specificity protei 99.9 5.3E-27 1.8E-31 235.1 14.0 205 347-576 33-292 (313)
241 3fhr_A MAP kinase-activated pr 99.9 4.7E-27 1.6E-31 237.8 13.4 205 346-576 33-287 (336)
242 2vx3_A Dual specificity tyrosi 99.9 9.7E-27 3.3E-31 239.9 15.7 155 347-510 59-260 (382)
243 1blx_A Cyclin-dependent kinase 99.9 3E-26 1E-30 230.9 17.8 219 347-576 16-296 (326)
244 1q8y_A SR protein kinase; tran 99.9 1.1E-26 3.8E-31 238.7 14.4 221 347-576 24-333 (373)
245 3rgz_A Protein brassinosteroid 99.9 1.4E-26 4.7E-31 260.1 15.7 200 15-220 3-234 (768)
246 3p23_A Serine/threonine-protei 99.9 1.5E-26 5.2E-31 241.5 13.8 205 346-576 28-283 (432)
247 2eu9_A Dual specificity protei 99.9 5E-26 1.7E-30 232.0 15.9 220 347-576 24-333 (355)
248 3qa8_A MGC80376 protein; kinas 99.9 5.1E-27 1.7E-31 253.1 8.4 220 347-581 19-307 (676)
249 2pzi_A Probable serine/threoni 99.9 3.4E-26 1.2E-30 253.2 14.0 203 347-581 85-326 (681)
250 4ecn_A Leucine-rich repeat pro 99.9 4.1E-26 1.4E-30 255.4 9.9 194 19-220 264-584 (876)
251 4fcg_A Uncharacterized protein 99.9 5.1E-26 1.7E-30 229.1 7.1 199 19-222 22-242 (328)
252 3m2w_A MAP kinase-activated pr 99.9 8.1E-25 2.8E-29 217.6 15.6 196 347-576 23-256 (299)
253 4eco_A Uncharacterized protein 99.9 1.9E-25 6.4E-30 245.3 10.8 197 20-220 26-341 (636)
254 3rgz_A Protein brassinosteroid 99.9 1.2E-24 4.1E-29 244.3 13.1 168 65-234 514-751 (768)
255 3dzo_A Rhoptry kinase domain; 99.9 4.9E-24 1.7E-28 221.6 10.2 201 347-576 83-363 (413)
256 2vuw_A Serine/threonine-protei 99.9 7.7E-24 2.6E-28 214.2 7.6 205 346-575 24-329 (336)
257 3m19_A Variable lymphocyte rec 99.9 2.5E-22 8.5E-27 194.3 14.9 159 65-224 35-194 (251)
258 1ogq_A PGIP-2, polygalacturona 99.9 1.2E-22 4.2E-27 203.0 10.8 164 65-231 125-312 (313)
259 3e6j_A Variable lymphocyte rec 99.9 1.5E-21 5E-26 185.9 14.3 150 52-203 16-176 (229)
260 2o6s_A Variable lymphocyte rec 99.9 2.1E-21 7.2E-26 182.0 14.6 153 52-205 4-167 (208)
261 2v9t_B SLIT homolog 2 protein 99.8 3E-21 1E-25 182.5 12.4 147 52-199 8-165 (220)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-21 8.6E-26 183.0 11.5 149 52-201 8-168 (220)
263 2o6q_A Variable lymphocyte rec 99.8 3.2E-20 1.1E-24 181.5 15.2 154 66-220 38-192 (270)
264 3rfs_A Internalin B, repeat mo 99.8 1.5E-19 5E-24 176.9 16.0 159 65-226 63-222 (272)
265 1w8a_A SLIT protein; signaling 99.8 1.4E-20 4.6E-25 174.0 7.5 132 68-203 11-143 (192)
266 2v9t_B SLIT homolog 2 protein 99.8 8.4E-20 2.9E-24 172.5 13.1 161 59-226 8-169 (220)
267 2o6q_A Variable lymphocyte rec 99.8 2.1E-19 7.1E-24 175.7 16.0 161 65-226 61-222 (270)
268 2xot_A Amphoterin-induced prot 99.8 2.3E-20 7.9E-25 190.5 9.0 173 52-225 15-205 (361)
269 1p9a_G Platelet glycoprotein I 99.8 2.9E-19 1E-23 176.3 15.9 150 66-219 32-182 (290)
270 2v70_A SLIT-2, SLIT homolog 2 99.8 2E-19 6.8E-24 169.9 13.7 162 58-226 7-170 (220)
271 3oja_A Leucine-rich immune mol 99.8 4E-22 1.4E-26 211.5 -5.5 162 55-224 90-252 (487)
272 3e6j_A Variable lymphocyte rec 99.8 4.1E-19 1.4E-23 168.9 14.9 163 56-226 13-176 (229)
273 1ozn_A Reticulon 4 receptor; N 99.8 1.8E-19 6.2E-24 177.6 11.7 155 65-220 56-212 (285)
274 1ozn_A Reticulon 4 receptor; N 99.8 4.3E-19 1.5E-23 174.9 14.2 155 65-220 32-188 (285)
275 4fcg_A Uncharacterized protein 99.8 2.4E-19 8.2E-24 180.3 11.8 153 65-222 104-266 (328)
276 3m19_A Variable lymphocyte rec 99.8 1.2E-18 4.1E-23 168.3 13.9 138 65-203 59-196 (251)
277 3zyi_A Leucine-rich repeat-con 99.8 1.2E-18 4E-23 183.5 14.1 166 53-220 50-229 (452)
278 3rfs_A Internalin B, repeat mo 99.8 2E-18 7E-23 168.8 14.4 140 65-205 85-224 (272)
279 2z80_A TOLL-like receptor 2, v 99.8 4.4E-19 1.5E-23 180.5 9.8 166 52-220 27-209 (353)
280 4g8a_A TOLL-like receptor 4; l 99.8 7.1E-19 2.4E-23 193.3 12.2 138 65-203 52-190 (635)
281 2z66_A Variable lymphocyte rec 99.8 4.2E-19 1.4E-23 176.9 9.2 167 52-220 4-186 (306)
282 2z81_A CD282 antigen, TOLL-lik 99.8 4.4E-19 1.5E-23 191.7 9.6 165 53-219 2-182 (549)
283 2z62_A TOLL-like receptor 4, v 99.8 8.4E-19 2.9E-23 172.0 10.4 138 65-203 28-166 (276)
284 2z62_A TOLL-like receptor 4, v 99.8 2.1E-18 7.2E-23 169.1 12.9 155 65-220 52-211 (276)
285 2o6s_A Variable lymphocyte rec 99.8 7E-18 2.4E-22 158.0 15.6 159 60-225 5-164 (208)
286 3vq2_A TLR4, TOLL-like recepto 99.8 1.4E-18 4.8E-23 190.1 12.5 139 65-204 32-171 (606)
287 2id5_A Lingo-1, leucine rich r 99.8 1.3E-18 4.6E-23 184.5 11.6 164 56-220 12-187 (477)
288 2o6r_A Variable lymphocyte rec 99.8 1.4E-18 4.6E-23 158.4 10.0 139 52-204 4-142 (177)
289 3v47_A TOLL-like receptor 5B a 99.8 1.7E-18 5.7E-23 182.6 12.2 150 54-204 7-172 (455)
290 2z66_A Variable lymphocyte rec 99.8 1.7E-18 5.9E-23 172.4 10.9 154 65-220 78-234 (306)
291 3v47_A TOLL-like receptor 5B a 99.8 1.5E-18 5.2E-23 182.9 10.7 161 65-226 212-412 (455)
292 3vq2_A TLR4, TOLL-like recepto 99.8 1.5E-18 5.1E-23 189.9 10.7 162 65-227 399-563 (606)
293 4b8c_D Glucose-repressible alc 99.7 5.8E-19 2E-23 195.8 6.8 178 22-204 130-334 (727)
294 4eco_A Uncharacterized protein 99.7 9E-19 3.1E-23 192.1 8.2 142 76-220 194-364 (636)
295 3oja_B Anopheles plasmodium-re 99.7 2.4E-18 8.4E-23 187.5 11.4 176 42-220 7-203 (597)
296 4ezg_A Putative uncharacterize 99.7 7.9E-18 2.7E-22 156.1 11.8 148 65-220 44-192 (197)
297 3o6n_A APL1; leucine-rich repe 99.7 4E-18 1.4E-22 175.9 10.8 174 44-220 3-197 (390)
298 3zyj_A Leucine-rich repeat-con 99.7 9.8E-18 3.4E-22 175.8 13.8 163 56-220 44-218 (440)
299 2ell_A Acidic leucine-rich nuc 99.7 3.7E-18 1.3E-22 154.0 8.9 135 65-202 24-163 (168)
300 3zyi_A Leucine-rich repeat-con 99.7 1.3E-17 4.5E-22 175.5 13.7 161 65-226 99-307 (452)
301 1xku_A Decorin; proteoglycan, 99.7 3E-17 1E-21 165.3 15.3 163 52-220 28-203 (330)
302 1ziw_A TOLL-like receptor 3; i 99.7 8.3E-18 2.8E-22 186.5 12.0 167 53-220 2-182 (680)
303 3zyj_A Leucine-rich repeat-con 99.7 1.5E-17 5.1E-22 174.4 13.0 159 65-226 112-296 (440)
304 2xwt_C Thyrotropin receptor; s 99.7 5.8E-18 2E-22 162.2 8.9 167 52-220 7-190 (239)
305 1wwl_A Monocyte differentiatio 99.7 3.2E-18 1.1E-22 170.9 7.3 154 65-220 95-264 (312)
306 2wfh_A SLIT homolog 2 protein 99.7 2.2E-17 7.5E-22 152.4 12.2 128 69-201 14-141 (193)
307 2je0_A Acidic leucine-rich nuc 99.7 5.1E-18 1.7E-22 149.8 7.4 128 65-195 17-149 (149)
308 2z7x_B TOLL-like receptor 1, v 99.7 1.2E-17 4E-22 179.3 11.5 158 65-226 324-485 (520)
309 3j0a_A TOLL-like receptor 5; m 99.7 8.2E-18 2.8E-22 190.7 10.6 70 157-227 476-565 (844)
310 4ecn_A Leucine-rich repeat pro 99.7 5.2E-18 1.8E-22 189.9 8.6 138 81-221 440-607 (876)
311 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 1.7E-17 5.7E-22 179.7 12.4 158 65-226 353-514 (562)
312 3t6q_A CD180 antigen; protein- 99.7 9.9E-18 3.4E-22 183.3 10.5 155 65-220 33-190 (606)
313 2ft3_A Biglycan; proteoglycan, 99.7 4.4E-17 1.5E-21 164.2 14.3 161 53-220 31-204 (332)
314 3j0a_A TOLL-like receptor 5; m 99.7 1.3E-17 4.4E-22 189.1 11.1 165 55-220 14-185 (844)
315 3t6q_A CD180 antigen; protein- 99.7 1.5E-17 5.2E-22 181.8 9.5 138 65-203 376-517 (606)
316 1w8a_A SLIT protein; signaling 99.7 1.6E-17 5.6E-22 153.3 8.2 127 52-179 5-143 (192)
317 1wwl_A Monocyte differentiatio 99.7 8.1E-18 2.8E-22 168.0 6.6 152 65-220 121-285 (312)
318 3oja_A Leucine-rich immune mol 99.7 1.3E-17 4.3E-22 176.9 8.5 150 66-220 59-225 (487)
319 2xot_A Amphoterin-induced prot 99.7 8E-17 2.7E-21 164.2 13.1 156 58-220 14-174 (361)
320 2z63_A TOLL-like receptor 4, v 99.7 2.8E-17 9.5E-22 178.3 10.0 158 66-225 374-534 (570)
321 4azs_A Methyltransferase WBDD; 99.7 2.9E-18 9.9E-23 184.5 1.9 151 349-506 241-436 (569)
322 2id5_A Lingo-1, leucine rich r 99.7 6.7E-17 2.3E-21 171.4 11.6 156 65-221 56-212 (477)
323 4glp_A Monocyte differentiatio 99.7 2.4E-17 8.2E-22 164.4 7.6 152 65-220 117-283 (310)
324 3oja_B Anopheles plasmodium-re 99.7 1.5E-16 5.2E-21 173.3 14.5 110 66-176 76-185 (597)
325 1p9a_G Platelet glycoprotein I 99.7 1.8E-16 6.2E-21 156.2 13.5 157 65-225 55-211 (290)
326 1ziw_A TOLL-like receptor 3; i 99.7 9.6E-17 3.3E-21 178.0 12.2 159 67-226 456-626 (680)
327 2wfh_A SLIT homolog 2 protein 99.7 1.2E-16 4.3E-21 147.3 10.7 123 52-176 7-140 (193)
328 3cvr_A Invasion plasmid antige 99.7 8E-17 2.7E-21 172.4 10.5 152 45-220 34-191 (571)
329 4g8a_A TOLL-like receptor 4; l 99.7 1.2E-16 4E-21 175.6 11.9 171 43-220 12-184 (635)
330 2z63_A TOLL-like receptor 4, v 99.7 1.1E-16 3.7E-21 173.7 11.0 138 65-203 28-166 (570)
331 2z80_A TOLL-like receptor 2, v 99.7 1.7E-16 5.7E-21 161.4 11.6 133 65-199 76-211 (353)
332 1xku_A Decorin; proteoglycan, 99.7 3.5E-16 1.2E-20 157.4 13.0 151 66-220 101-274 (330)
333 2ft3_A Biglycan; proteoglycan, 99.7 5.8E-16 2E-20 156.0 14.6 149 67-220 125-275 (332)
334 3o6n_A APL1; leucine-rich repe 99.7 4.7E-16 1.6E-20 160.3 14.2 84 66-150 94-178 (390)
335 4ezg_A Putative uncharacterize 99.7 2.7E-16 9.1E-21 145.8 10.7 130 65-200 66-195 (197)
336 1h6t_A Internalin B; cell adhe 99.7 3.3E-16 1.1E-20 154.5 11.9 144 65-220 68-211 (291)
337 4glp_A Monocyte differentiatio 99.7 1.5E-16 5E-21 158.7 9.3 155 65-221 91-263 (310)
338 2ell_A Acidic leucine-rich nuc 99.7 2.6E-16 8.8E-21 141.9 9.8 131 87-220 22-158 (168)
339 2je0_A Acidic leucine-rich nuc 99.7 1.9E-16 6.4E-21 139.7 8.4 113 88-203 16-130 (149)
340 2xwt_C Thyrotropin receptor; s 99.6 1.8E-16 6.2E-21 151.7 8.9 153 65-220 55-216 (239)
341 1xeu_A Internalin C; cellular 99.6 1E-15 3.5E-20 148.6 12.5 143 65-220 41-183 (263)
342 1h6u_A Internalin H; cell adhe 99.6 1.4E-15 4.8E-20 151.3 13.6 144 65-220 63-206 (308)
343 1h6t_A Internalin B; cell adhe 99.6 1.6E-15 5.5E-20 149.6 13.6 144 65-220 46-189 (291)
344 3o53_A Protein LRIM1, AGAP0063 99.6 2.2E-16 7.6E-21 157.9 6.8 132 88-223 119-251 (317)
345 2z7x_B TOLL-like receptor 1, v 99.6 4E-16 1.4E-20 167.3 9.2 132 65-203 21-157 (520)
346 1h6u_A Internalin H; cell adhe 99.6 1.1E-15 3.7E-20 152.2 11.7 144 65-220 85-228 (308)
347 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 6.4E-16 2.2E-20 167.3 10.6 132 86-220 350-484 (562)
348 1a9n_A U2A', U2A'; complex (nu 99.6 4.9E-16 1.7E-20 141.2 8.0 129 65-200 19-154 (176)
349 2z81_A CD282 antigen, TOLL-lik 99.6 1.4E-15 4.8E-20 164.1 13.0 155 60-220 2-159 (549)
350 1m9s_A Internalin B; cell inva 99.6 1.3E-15 4.5E-20 164.7 12.3 144 65-220 65-208 (605)
351 4b8c_D Glucose-repressible alc 99.6 8.9E-17 3.1E-21 178.2 2.8 135 65-204 224-359 (727)
352 3en9_A Glycoprotease, O-sialog 99.6 3.1E-16 1.1E-20 167.7 6.9 154 347-509 341-539 (540)
353 3o53_A Protein LRIM1, AGAP0063 99.6 1.7E-15 5.8E-20 151.5 10.5 134 65-203 120-255 (317)
354 3g39_A Variable lymphocyte rec 99.6 2.8E-15 9.6E-20 135.2 10.5 104 68-175 12-115 (170)
355 1dce_A Protein (RAB geranylger 99.6 1.9E-15 6.6E-20 162.4 11.0 109 90-204 442-551 (567)
356 2o6r_A Variable lymphocyte rec 99.6 6.5E-15 2.2E-19 133.9 12.8 131 91-225 9-140 (177)
357 4fmz_A Internalin; leucine ric 99.6 3.6E-15 1.2E-19 151.1 12.0 128 85-220 217-344 (347)
358 3g39_A Variable lymphocyte rec 99.6 4.1E-15 1.4E-19 134.1 10.5 110 91-204 11-120 (170)
359 1ds9_A Outer arm dynein; leuci 99.6 1.1E-17 3.7E-22 155.4 -7.8 134 65-204 18-158 (198)
360 4ay9_X Follicle-stimulating ho 99.6 3.4E-15 1.1E-19 151.5 9.9 165 53-218 7-186 (350)
361 1xeu_A Internalin C; cellular 99.6 9E-15 3.1E-19 141.9 12.0 126 65-202 63-188 (263)
362 2r9u_A Variable lymphocyte rec 99.6 7.8E-15 2.7E-19 132.7 10.8 104 68-175 15-118 (174)
363 1o6v_A Internalin A; bacterial 99.6 8.7E-15 3E-19 154.5 12.6 144 65-220 221-364 (466)
364 1m9s_A Internalin B; cell inva 99.6 8.1E-15 2.8E-19 158.6 12.2 144 65-220 43-186 (605)
365 3cvr_A Invasion plasmid antige 99.6 7.8E-15 2.7E-19 157.0 11.4 114 65-199 80-193 (571)
366 1dce_A Protein (RAB geranylger 99.5 1.2E-14 4E-19 156.3 10.7 135 79-220 399-544 (567)
367 2r9u_A Variable lymphocyte rec 99.5 2.2E-14 7.6E-19 129.7 10.7 109 92-204 15-123 (174)
368 1o6v_A Internalin A; bacterial 99.5 3.9E-14 1.3E-18 149.5 13.7 144 65-220 199-342 (466)
369 1a9n_A U2A', U2A'; complex (nu 99.5 8.9E-15 3E-19 132.8 7.5 132 83-220 13-151 (176)
370 4fmz_A Internalin; leucine ric 99.5 2.8E-14 9.6E-19 144.5 11.6 126 65-199 221-346 (347)
371 3bz5_A Internalin-J, INLJ; leu 99.5 6.1E-14 2.1E-18 147.2 14.3 122 66-202 43-164 (457)
372 3bz5_A Internalin-J, INLJ; leu 99.5 1.4E-13 4.8E-18 144.5 14.3 138 65-219 85-222 (457)
373 2ast_B S-phase kinase-associat 99.5 2E-15 6.8E-20 152.2 -0.4 154 65-220 70-233 (336)
374 1jl5_A Outer protein YOPM; leu 99.5 2E-13 7E-18 143.1 13.9 136 65-220 91-226 (454)
375 1jl5_A Outer protein YOPM; leu 99.5 2.1E-13 7.1E-18 143.0 13.6 137 65-219 111-247 (454)
376 2ast_B S-phase kinase-associat 99.5 9.6E-15 3.3E-19 147.2 2.1 155 65-220 93-258 (336)
377 2ca6_A RAN GTPase-activating p 99.4 9.5E-15 3.2E-19 150.3 1.2 156 65-221 122-315 (386)
378 2ifg_A High affinity nerve gro 99.4 8.6E-14 3E-18 140.9 8.2 108 54-175 7-116 (347)
379 2ca6_A RAN GTPase-activating p 99.4 1.2E-14 4.1E-19 149.5 0.7 113 86-199 91-229 (386)
380 3g06_A SSPH2 (leucine-rich rep 99.4 1.3E-13 4.5E-18 149.3 8.8 136 45-201 13-156 (622)
381 3goz_A Leucine-rich repeat-con 99.4 1.8E-14 6.3E-19 146.7 1.9 137 66-203 23-184 (362)
382 2ifg_A High affinity nerve gro 99.4 2.7E-13 9.2E-18 137.2 9.5 106 92-201 11-118 (347)
383 3g06_A SSPH2 (leucine-rich rep 99.4 1.5E-12 5.2E-17 141.0 12.8 55 161-220 241-295 (622)
384 3goz_A Leucine-rich repeat-con 99.4 8.5E-14 2.9E-18 141.8 2.7 151 69-220 2-178 (362)
385 1ds9_A Outer arm dynein; leuci 99.4 4.7E-15 1.6E-19 137.4 -6.2 130 85-220 14-151 (198)
386 1zar_A RIO2 kinase; serine kin 99.3 1.2E-12 4E-17 128.2 8.3 134 347-493 95-274 (282)
387 4ay9_X Follicle-stimulating ho 99.3 3.1E-12 1.1E-16 129.6 9.2 136 65-202 54-218 (350)
388 1z7x_W Ribonuclease inhibitor; 99.3 2.3E-13 8E-18 143.3 -2.5 155 65-220 227-409 (461)
389 1z7x_W Ribonuclease inhibitor; 99.2 4.3E-13 1.5E-17 141.3 -4.3 155 65-220 199-381 (461)
390 3un9_A NLR family member X1; l 99.1 5.1E-12 1.8E-16 128.5 -1.5 135 65-200 72-225 (372)
391 3un9_A NLR family member X1; l 99.0 1.2E-11 4.2E-16 125.7 -3.2 136 65-201 101-254 (372)
392 3rw6_A Nuclear RNA export fact 98.9 4.8E-12 1.6E-16 121.2 -8.7 145 54-203 77-237 (267)
393 3ogk_B Coronatine-insensitive 98.9 1.5E-10 5E-15 125.9 -1.3 155 65-220 342-524 (592)
394 3sb4_A Hypothetical leucine ri 98.9 2.6E-09 9E-14 106.9 7.1 54 88-142 100-153 (329)
395 3sb4_A Hypothetical leucine ri 98.8 6.7E-09 2.3E-13 103.9 10.0 56 65-121 101-156 (329)
396 3ogk_B Coronatine-insensitive 98.7 2.9E-09 1E-13 115.6 1.9 128 67-196 140-280 (592)
397 3rw6_A Nuclear RNA export fact 98.7 1E-09 3.5E-14 105.0 -2.1 104 85-192 137-257 (267)
398 1zth_A RIO1 serine protein kin 98.6 8.6E-08 2.9E-12 92.2 9.7 110 347-467 52-218 (258)
399 1io0_A Tropomodulin; LRR prote 98.6 5.6E-09 1.9E-13 95.0 0.7 115 84-199 31-164 (185)
400 2p1m_B Transport inhibitor res 98.6 4.3E-09 1.5E-13 114.3 -1.7 154 65-220 338-517 (594)
401 2ra8_A Uncharacterized protein 98.5 4.5E-08 1.5E-12 98.6 4.5 111 88-199 192-320 (362)
402 1io0_A Tropomodulin; LRR prote 98.5 2.3E-08 8E-13 90.8 0.9 110 65-175 36-164 (185)
403 4gyi_A RIO2 kinase; protein ki 98.5 6.8E-08 2.3E-12 97.2 4.1 102 346-455 99-242 (397)
404 2p1m_B Transport inhibitor res 98.4 6.2E-08 2.1E-12 105.1 1.5 130 65-196 105-245 (594)
405 4fdw_A Leucine rich hypothetic 98.2 4.9E-06 1.7E-10 85.2 11.9 127 66-199 158-284 (401)
406 4fdw_A Leucine rich hypothetic 98.2 3.9E-06 1.3E-10 85.9 10.9 124 65-194 180-308 (401)
407 2ra8_A Uncharacterized protein 98.1 1.1E-06 3.6E-11 88.6 3.7 132 65-200 139-293 (362)
408 3e4g_A ATP synthase subunit S, 97.6 4.3E-05 1.5E-09 67.7 4.0 34 90-123 62-95 (176)
409 3e4g_A ATP synthase subunit S, 97.3 5.8E-05 2E-09 66.8 1.9 82 66-147 62-149 (176)
410 1pgv_A TMD-1, tropomodulin TMD 97.3 5.7E-05 2E-09 68.2 1.7 109 88-197 40-168 (197)
411 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00012 4E-09 66.1 1.9 111 64-175 40-170 (197)
412 4gt6_A Cell surface protein; l 97.1 0.00098 3.4E-08 67.9 8.8 117 77-198 253-369 (394)
413 3tm0_A Aminoglycoside 3'-phosp 97.1 0.0013 4.3E-08 62.8 8.6 80 348-435 20-100 (263)
414 3d1u_A Putative fructosamine-3 97.1 0.0013 4.3E-08 63.9 8.5 74 348-432 21-97 (288)
415 3rfe_A Platelet glycoprotein I 97.0 0.0011 3.6E-08 55.8 6.3 37 114-150 32-68 (130)
416 4gt6_A Cell surface protein; l 96.9 0.0021 7.1E-08 65.4 9.1 87 106-196 258-344 (394)
417 4fs7_A Uncharacterized protein 96.9 0.0023 7.8E-08 65.2 8.9 83 109-195 293-375 (394)
418 4h09_A Hypothetical leucine ri 96.9 0.0022 7.4E-08 64.9 8.3 110 82-195 210-319 (379)
419 3rfe_A Platelet glycoprotein I 96.8 0.0019 6.5E-08 54.2 6.4 57 68-126 11-68 (130)
420 1nd4_A Aminoglycoside 3'-phosp 96.7 0.0021 7.3E-08 60.9 6.3 73 351-433 29-103 (264)
421 4fs7_A Uncharacterized protein 96.4 0.0043 1.5E-07 63.1 6.7 103 83-191 291-393 (394)
422 4h09_A Hypothetical leucine ri 96.4 0.0056 1.9E-07 61.8 7.5 126 66-196 218-343 (379)
423 3dxp_A Putative acyl-COA dehyd 96.1 0.0077 2.6E-07 60.3 6.6 78 348-432 44-128 (359)
424 2ks1_B Epidermal growth factor 94.0 0.0091 3.1E-07 38.6 -0.1 27 271-297 12-38 (44)
425 4gkh_A Aminoglycoside 3'-phosp 94.0 0.12 4.1E-06 49.0 7.9 78 350-436 32-111 (272)
426 2olc_A MTR kinase, methylthior 93.3 0.11 3.6E-06 52.6 6.4 76 348-430 36-120 (397)
427 3jr1_A Putative fructosamine-3 93.0 0.21 7E-06 48.7 7.7 74 348-432 42-118 (312)
428 2l2t_A Receptor tyrosine-prote 92.8 0.01 3.4E-07 38.3 -1.3 28 270-297 10-37 (44)
429 3f7w_A Putative fructosamine-3 92.5 0.34 1.2E-05 46.4 8.4 74 348-432 21-97 (288)
430 3cxl_A N-chimerin; SH2, RHO-GA 91.7 0.022 7.7E-07 58.9 -1.2 57 355-416 152-215 (463)
431 3r70_A Aminoglycoside phosphot 90.3 0.24 8.1E-06 48.4 4.7 70 347-433 42-115 (320)
432 3ovc_A Hygromycin-B 4-O-kinase 89.7 1 3.4E-05 44.8 8.8 72 348-432 47-121 (362)
433 3tdw_A Gentamicin resistance p 86.5 0.78 2.7E-05 44.3 5.6 74 348-434 25-102 (306)
434 3ats_A Putative uncharacterize 84.7 0.69 2.4E-05 45.7 4.3 85 349-433 27-121 (357)
435 2jwa_A Receptor tyrosine-prote 81.8 0.1 3.6E-06 33.5 -2.0 7 272-278 14-20 (44)
436 3sg8_A APH(2'')-ID; antibiotic 77.0 1.3 4.5E-05 42.5 3.1 73 348-433 26-104 (304)
437 2k1k_A Ephrin type-A receptor 76.1 0.28 9.6E-06 30.6 -1.3 8 271-278 12-19 (38)
438 2q83_A YTAA protein; 2635576, 69.6 8.6 0.00029 37.1 7.1 73 348-432 38-118 (346)
439 2k9y_A Ephrin type-A receptor 68.7 0.76 2.6E-05 29.2 -0.6 11 272-282 15-25 (41)
440 1zyl_A Hypothetical protein YI 65.5 12 0.00043 35.8 7.2 75 349-432 33-114 (328)
441 2yle_A Protein spire homolog 1 62.8 12 0.00041 33.8 5.8 34 472-507 102-135 (229)
442 2pyw_A Uncharacterized protein 58.8 17 0.00058 36.5 7.0 73 348-429 40-122 (420)
443 3feg_A Choline/ethanolamine ki 52.0 13 0.00043 37.0 4.5 79 348-432 56-137 (379)
444 1nw1_A Choline kinase (49.2 KD 47.2 17 0.00057 36.8 4.7 78 348-432 79-159 (429)
445 3csv_A Aminoglycoside phosphot 45.4 31 0.0011 33.1 6.2 77 349-437 25-104 (333)
446 2ppq_A HSK, HK, homoserine kin 44.3 35 0.0012 32.4 6.3 74 349-432 29-110 (322)
447 2qg7_A Ethanolamine kinase PV0 43.7 43 0.0015 34.0 7.1 74 348-432 114-188 (458)
448 2lz0_A Uncharacterized protein 36.7 1E+02 0.0034 23.6 6.7 46 76-122 7-52 (100)
449 3c5i_A Choline kinase; choline 36.1 47 0.0016 32.4 5.9 79 348-432 39-121 (369)
450 2lz0_A Uncharacterized protein 30.7 73 0.0025 24.4 5.0 45 101-146 8-52 (100)
451 3i1a_A Spectinomycin phosphotr 26.4 1E+02 0.0035 29.5 6.4 68 351-432 32-108 (339)
452 3dxq_A Choline/ethanolamine ki 25.4 56 0.0019 30.7 4.2 70 348-432 24-95 (301)
453 3mes_A Choline kinase; malaria 23.9 86 0.0029 31.4 5.4 79 348-432 76-157 (424)
454 2klu_A T-cell surface glycopro 23.5 23 0.0008 24.7 0.7 8 276-283 13-20 (70)
455 3ox7_P MH027; urokinase-type p 22.0 21 0.00071 18.4 0.1 8 54-61 7-14 (23)
456 2llm_A Amyloid beta A4 protein 22.0 28 0.00096 22.0 0.0 10 272-281 19-28 (43)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.9e-42 Score=342.03 Aligned_cols=218 Identities=23% Similarity=0.301 Sum_probs=170.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.........+.||||+++........++|.+|+.++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 35679999999999999854322233389999999876555556889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------------------------ccccccCCCCccccccCeEEecCC
Q 007935 426 FIRNGSLYAALHG-------------------------------------------FGLNRLLPGTSKVTKNETIVTSGT 462 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~ 462 (584)
||++|||.++|+. .-|+|+++.|+.+..+..++..||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCS
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCc
Confidence 9999999998842 147889999999888888999998
Q ss_pred Cccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 463 GSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 463 ~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
|.+. ..||+.|||||++.. ..|+.|+|||||||+||||+| |+.||.+.. ..+++......
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~~~~~~~i~~~ 263 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVVEMIRNR 263 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----HHHHHHHHHTT
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcC
Confidence 7432 368899999999665 689999999999999999999 899997532 23333333332
Q ss_pred C-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 529 R-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 529 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
. .+.++.++ ..+.+++.+||+.||++||||.||++.|+++.
T Consensus 264 ~~~~~p~~~~-------------~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 264 QVLPCPDDCP-------------AWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp CCCCCCTTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCcccch-------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 22222222 24566888899999999999999999998764
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=339.65 Aligned_cols=218 Identities=23% Similarity=0.353 Sum_probs=171.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.+.......+.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++..+||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35679999999999999865322223389999999864 33445889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc------------------------------------------ccccccCCCCccccccCeEEecCCC
Q 007935 426 FIRNGSLYAALHG------------------------------------------FGLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 426 y~~~GsL~~~L~~------------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
||++|+|.++|+. .-|+|+++.|+.+..+..++..|||
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccc
Confidence 9999999887752 1478899999988888889999988
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
.+. ..||+.|||||++.. ..|+.++|||||||++|||+| |+.||.+.. ..+.+.......
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~i~~g~ 277 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-----NTEAIDCITQGR 277 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-----HHHHHHHHHHTC
T ss_pred cceeccCCCcceecCcccccccccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCC
Confidence 432 358999999999554 789999999999999999999 899997532 233333333322
Q ss_pred -CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 530 -RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 530 -~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.++.+++ ++.+|+.+||+.||++||||.||++.|+.+..
T Consensus 278 ~~~~p~~~~~-------------~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 278 ELERPRACPP-------------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp CCCCCTTCCH-------------HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCcccccH-------------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 223333333 34568888999999999999999999998753
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.9e-42 Score=336.70 Aligned_cols=217 Identities=22% Similarity=0.355 Sum_probs=170.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||+||+|++.+.......+.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++..+||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 35689999999999999865332233389999999864 33445889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc----------------------------------------ccccccCCCCccccccCeEEecCCCcc
Q 007935 426 FIRNGSLYAALHG----------------------------------------FGLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 426 y~~~GsL~~~L~~----------------------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
||++|+|.++|+. .-|+|+++.|+.+..+..++..|||.+
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccc
Confidence 9999999988853 147889999998888888999999853
Q ss_pred c-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-
Q 007935 466 I-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR- 530 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~- 530 (584)
. ..||+.|||||++.. ..|+.|+|||||||++|||+| |+.||.+. ...+++........
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQL-----SNNEVIECITQGRVL 249 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHHTCCC
T ss_pred eecCCCCceeecCceecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcCCCC
Confidence 2 258899999999655 689999999999999999999 89999753 22334444433322
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.++.+++ ++.+++.+||+.||++||||+||++.|+++.
T Consensus 250 ~~p~~~~~-------------~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 250 QRPRTCPQ-------------EVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCccchH-------------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 22333333 3456888899999999999999999999874
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=330.00 Aligned_cols=216 Identities=23% Similarity=0.315 Sum_probs=165.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||+||+|++.+ .||||+++.. ......++|.+|+++|++++|||||+++|+|. ++..+|||
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVm 110 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred EeeEEeeCCCcEEEEEEECC--------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEE
Confidence 45789999999999998643 5899999754 33344578999999999999999999999885 46789999
Q ss_pred ecccCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||++|+|.++|+. .-|+|+++.|+.+..+..++..|||.+.
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 99999999888753 2479999999999888888998988432
Q ss_pred ---ccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhh
Q 007935 467 ---SAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPAL 540 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~ 540 (584)
.+||+.|||||++.. ...|+.|+|||||||+||||+||+.||.+... ............. +......+.
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~----~~~~~~~~~~~~~~p~~~~~~~~- 265 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----RDQIIFMVGRGYASPDLSKLYKN- 265 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHTTCCCCCSTTSCTT-
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh----HHHHHHHHhcCCCCCCccccccc-
Confidence 369999999998643 23689999999999999999999999975322 1222222221111 101111111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+...+.+++.+||+.||++||||.||++.|+.++.
T Consensus 266 --------~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 266 --------CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --------SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --------chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 12245668889999999999999999999998864
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-39 Score=318.05 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
...||+|+||+||+|....++ ..||||++... ......+.|.+|+++|++++|||||+++++|.+ ++..|
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 105 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETT-----VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred eeEEecCcCcEEEEEEECCCC-----eEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence 356999999999999988776 89999999764 233345789999999999999999999999976 34589
Q ss_pred EeeecccCCcHHHHH-------------------------hccc----ccccCCCCccccc-cCeEEecCCCcc------
Q 007935 422 LISDFIRNGSLYAAL-------------------------HGFG----LNRLLPGTSKVTK-NETIVTSGTGSR------ 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-------------------------~~~g----~~~~~~~~~~i~~-~~~~~~~~~~~~------ 465 (584)
||||||++|+|.++| |..+ |+|++++|+.+.. ++.++..|||.+
T Consensus 106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 999999999996554 4434 7899999988864 578888888853
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~ 540 (584)
..+||+.|||||++ . ..|+.++|||||||++|||+||+.||.+. .....+.........+ ++...++
T Consensus 186 ~~~~~~GTp~YmAPE~~-~-~~y~~~~DiwSlGvilyelltg~~Pf~~~----~~~~~~~~~i~~~~~~~~~~~~~~~-- 257 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRRVTSGVKPASFDKVAIP-- 257 (290)
T ss_dssp SBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC----SSHHHHHHHHTTTCCCGGGGGCCCH--
T ss_pred ccCCcccCccccCHHHc-C-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC----CcHHHHHHHHHcCCCCCCCCccCCH--
Confidence 24799999999985 4 36999999999999999999999999742 2233444443333221 1222223
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++.+++.+||+.||++|||++|+++
T Consensus 258 -----------~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 258 -----------EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHccCChhHCcCHHHHhc
Confidence 3445777899999999999999975
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.9e-40 Score=326.89 Aligned_cols=206 Identities=19% Similarity=0.276 Sum_probs=163.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+....+ +.||||+++... .....+.|.+|+++|++++|||||++++++.+++..|||||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDG-----RQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCC-----CEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 467999999999999988766 899999997652 33445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. . -|+|++++|+.+..++.++..|||.+.
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 9999999877742 2 479999999999888999999998542
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
.+||+.|||||++. +..|+.++||||+||++|||+||+.||.+ ....+++........ +.+..+++++
T Consensus 184 ~~~GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~~~~~~s~~~---- 253 (350)
T 4b9d_A 184 ACIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEA-----GSMKNLVLKIISGSFPPVSLHYSYDL---- 253 (350)
T ss_dssp HHHSCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHTCCCCCCTTSCHHH----
T ss_pred ccCCCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCCCCCCccCCHHH----
Confidence 36999999999954 57899999999999999999999999974 234455555554432 2333344443
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 254 ---------~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 254 ---------RSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---------HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------HHHHHHHccCChhHCcCHHHHhc
Confidence 45677799999999999999975
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.9e-40 Score=326.16 Aligned_cols=223 Identities=20% Similarity=0.255 Sum_probs=162.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC----ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND----EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~----~~~l 422 (584)
.+.||+|+||+||+|++. + +.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g------~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-G------EEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEECSSSEEEEEEET-T------EEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEEC-C------EEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 467999999999999984 3 79999999753221 123345666677899999999999998765 4799
Q ss_pred eeecccCCcHHHHHh------------------------c----------ccccccCCCCccccccCeEEecCCCccc--
Q 007935 423 ISDFIRNGSLYAALH------------------------G----------FGLNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~------------------------~----------~g~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
|||||++|+|.++|+ . .-|+|+++.|+.+..+..++..|||.+.
T Consensus 79 V~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999976654 2 2478899999998888889999988421
Q ss_pred -------------ccCCCcccCccccccC-----CCCCCccchhhHHHHHHHHHhCCCCCCCCCC----------CCCcH
Q 007935 467 -------------SAISNVYLAPEARIYG-----SKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DGKGL 518 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~-----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~----------~~~~l 518 (584)
..||+.|||||++... ..++.|+|||||||++|||+||+.||..... .....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 3699999999986432 1467899999999999999999877643221 11223
Q ss_pred HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 519 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
..+........ .+|.+.......+....+.+++.+||+.||++||||.||+++|++|..|
T Consensus 239 ~~~~~~~~~~~------~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccc------CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 33333332221 1122212122234456778899999999999999999999999998654
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.1e-40 Score=326.64 Aligned_cols=204 Identities=19% Similarity=0.241 Sum_probs=163.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+.||+|+||+||+|+...++ +.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg-----~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSG-----KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp EEEEECSSCEEEEEEETTTC-----CEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred EEeecCcCeEEEEEEECCCC-----CEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999998776 8999999976432 23477999999999999999999999999999999999999
Q ss_pred cCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cccCC
Q 007935 428 RNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAIS 470 (584)
Q Consensus 428 ~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~gt 470 (584)
++|+|.+++ |+. -|+|++++|+.+..++.++..|||.+ ..+||
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT 233 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 233 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccC
Confidence 999996655 333 47999999999988899999998843 24799
Q ss_pred CcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---CCccccChhhhhhhhHH
Q 007935 471 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 471 ~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~ 547 (584)
+.|||||++. +..|+.++||||+||++|||+||+.||.+. ...+.+........ +....++++
T Consensus 234 p~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~-------- 299 (346)
T 4fih_A 234 PYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLPPRLKNLHKVSPS-------- 299 (346)
T ss_dssp GGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSCCCCSCGGGSCHH--------
T ss_pred cCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCCCCCCccccCCHH--------
Confidence 9999999854 478999999999999999999999999742 22333333332221 112223333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 300 -----~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 300 -----LKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -----HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345777799999999999999975
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.5e-39 Score=326.54 Aligned_cols=219 Identities=21% Similarity=0.313 Sum_probs=174.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeC-CceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYAN-DEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~-~~~~lV 423 (584)
..+.||+|+||+||+|++...+...+.+.||||+++........++|.+|+++|++++| ||||+++|+|.++ +..+||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 45789999999999999887766666789999999876555556889999999999965 9999999999775 568999
Q ss_pred eecccCCcHHHHHhc-------------------------------------------ccccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALHG-------------------------------------------FGLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------------------------~g~~~~~~~~~~i~~~~~~~~~ 460 (584)
||||++|+|.++|+. .-|+|+++.|+.+..+..++..
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~ 227 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 227 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEEC
Confidence 999999999988853 1478999999988888889999
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
|||.+. ..||+.|||||++.. ..|+.|+|||||||+||||+| |+.||.+..... .+...+....
T Consensus 228 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~~~~~i~~g~ 305 (353)
T 4ase_A 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGT 305 (353)
T ss_dssp CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTC
T ss_pred cchhhhhcccCCCceeeccccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-HHHHHHHcCC
Confidence 988542 257889999999655 689999999999999999998 999998643221 1222222211
Q ss_pred hcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 527 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 527 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+.+.++.++++ +.+++.+||+.||++||||.||++.|+++
T Consensus 306 --~~~~p~~~~~~-------------~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 306 --RMRAPDYTTPE-------------MYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp --CCCCCTTCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCccCCHH-------------HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 22233334433 45577889999999999999999999886
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-39 Score=324.12 Aligned_cols=205 Identities=16% Similarity=0.139 Sum_probs=162.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++... .+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g-----~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTG-----FQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred CcEeccCCCeEEEEEEECCCC-----CEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 467999999999999998776 899999997632 235799999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------c--cccccCCCCccccccC-eEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNE-TIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~-~~~~~~~~~~~------------ 466 (584)
|++|+|.++|+. . -|+|++++|+.+..++ .++..|||.+.
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 999999777643 2 4799999999888776 58888887432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~ 539 (584)
.+||+.|||||++. +..|+.++|||||||++|||+||+.||.+..... .+.. ......+ +++.+++.
T Consensus 212 ~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~----i~~~~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLK----IASEPPPIREIPPSCAPL 285 (336)
T ss_dssp --CCCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHH----HHHSCCGGGGSCTTSCHH
T ss_pred cCCccccCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHH----HHcCCCCchhcCccCCHH
Confidence 26999999999954 5789999999999999999999999998643322 2222 2222222 22223333
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+.+++.+||+.||++|||+.|+++.|.+.
T Consensus 286 -------------~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 286 -------------TAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp -------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------HHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 34577779999999999999999887754
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.1e-39 Score=310.40 Aligned_cols=206 Identities=17% Similarity=0.229 Sum_probs=160.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+...++ +.||||++++.. .....+.|.+|+++|++++|||||++++++.+++..|+||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTG-----QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp EEEEEC---CCEEEEECTTTC-----CEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCcCeEEEEEEECCCC-----CEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 467999999999999987765 899999997652 2333467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------~ 467 (584)
||| +|+|.+++. +. -|+|++++|+.+..++.++..|||.+. .
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~ 171 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCe
Confidence 999 689976653 33 479999999999888889998988542 4
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+||+.|||||++.....++.++||||+||++|||+||+.||.+ .....+.+.......++++.+++++.
T Consensus 172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 240 (275)
T 3hyh_A 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAA------ 240 (275)
T ss_dssp ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTSCHHHH------
T ss_pred eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence 7999999999965433346899999999999999999999974 33455556665555555565665554
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++.+||+.||++|||++|+++
T Consensus 241 -------~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 241 -------GLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -------HHHHHHSCSSGGGSCCHHHHHH
T ss_pred -------HHHHHHccCChhHCcCHHHHHc
Confidence 4666699999999999999986
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-39 Score=319.66 Aligned_cols=206 Identities=15% Similarity=0.179 Sum_probs=170.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||+||+|+...++ +.||||++.+.. .....+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~-----~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATS-----REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEecccCeEEEEEEECCCC-----CEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999998876 899999997541 233347899999999999999999999999999999999
Q ss_pred eecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||||++|+|.++|.. . -|+|++++|+.+..++.++..|||.+.
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 999999999766642 2 479999999999888899998887432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
.+||+.|||||++.. ..|+.++||||+||++|||+||+.||.+ .+..............+++.+++++.
T Consensus 191 ~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~-- 262 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRA-----GNEGLIFAKIIKLEYDFPEKFFPKAR-- 262 (311)
T ss_dssp BCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTCCHHHH--
T ss_pred ccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCCCCCCcccCHHHH--
Confidence 369999999999554 7899999999999999999999999974 23455566666666556666665554
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
+++.+||+.||++|||++|+.
T Consensus 263 -----------dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 263 -----------DLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -----------HHHHHHSCSSGGGSTTSGGGT
T ss_pred -----------HHHHHHccCCHhHCcChHHHc
Confidence 466669999999999999864
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=327.43 Aligned_cols=205 Identities=19% Similarity=0.236 Sum_probs=164.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++..... ...+.+.+|+++|++++|||||+++++|.+++..||||||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg-----~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSG-----KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEeccCcCcEEEEEEECCCC-----CEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999998776 8999999986533 3347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
|++|+|.+++ |.. -|+|++++|+.+..++.++..|||.+ ..+|
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~G 309 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 309 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEE
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccccc
Confidence 9999996555 433 47999999999998999999998843 2369
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---CCccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---PLSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~d~~~~~~~~~ 546 (584)
|+.|||||++. +..|+.++|||||||++|||++|+.||.+. ...+.+........ .....++++
T Consensus 310 Tp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~------- 376 (423)
T 4fie_A 310 TPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLPPRLKNLHKVSPS------- 376 (423)
T ss_dssp CTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCCCCCSCTTSSCHH-------
T ss_pred CcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCCCCCcccccCCHH-------
Confidence 99999999954 478999999999999999999999999742 22333333332221 112233433
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+|+.+||+.||++|||+.|+++
T Consensus 377 ------~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 377 ------LKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ------HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHHcCCChhHCcCHHHHhc
Confidence 345677799999999999999975
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-38 Score=312.50 Aligned_cols=208 Identities=24% Similarity=0.341 Sum_probs=161.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...+.. ..+.||||+++... ......++.+|+++|++++|||||++++++.+++..|+|||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSD--ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTT--TTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEecCCCeEEEEEEEccCCC--CCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 4689999999999998754321 12799999997652 22233578999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
||++|+|.++|+ +. -|+|++++|+.+..++.++..|||.+ ..
T Consensus 107 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 186 (304)
T 3ubd_A 107 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186 (304)
T ss_dssp CCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSC
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcccccc
Confidence 999999976664 32 47999999999888888888888743 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
+||+.|||||++. +..|+.++||||+||++|||+||+.||.+ .+..+..........++++.+++++.
T Consensus 187 ~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 254 (304)
T 3ubd_A 187 CGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQG-----KDRKETMTMILKAKLGMPQFLSPEAQ------ 254 (304)
T ss_dssp CCCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHHH------
T ss_pred ccCcccCCHHHhc-cCCCCCCCcccchHHHHHHHHhCCCCCCC-----cCHHHHHHHHHcCCCCCCCcCCHHHH------
Confidence 7999999999954 47899999999999999999999999974 23455556666666556666666554
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCh-----HHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRM-----RTVS 575 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~ 575 (584)
+++.+||+.||++|||+ +|++
T Consensus 255 -------~li~~~L~~dP~~R~ta~~~~~~eil 280 (304)
T 3ubd_A 255 -------SLLRMLFKRNPANRLGAGPDGVEEIK 280 (304)
T ss_dssp -------HHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred -------HHHHHHcccCHHHCCCCCcCCHHHHH
Confidence 46666999999999985 5665
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-36 Score=301.21 Aligned_cols=205 Identities=18% Similarity=0.312 Sum_probs=154.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||+||+|+...++ +.||||+++........+.|.+|+++|++++|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDD-----CNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp EEEEEECC--EEEEEEETTTC-----CEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred eeEEecCCCeEEEEEEECCCC-----CEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468999999999999988765 89999999865555555789999999999999999999999986543
Q ss_pred -----eeEeeecccCCcHHHHHhc----------------------------c--cccccCCCCccccccCeEEecCCCc
Q 007935 420 -----KLLISDFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 420 -----~~lV~Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
.|+|||||++|+|.++++. . -|+|++++|+.+..++.++..|||.
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 6899999999999766642 2 4789999999998888899988885
Q ss_pred cc-----------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 007935 465 RI-----------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 521 (584)
Q Consensus 465 ~~-----------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~ 521 (584)
+. .+||+.|||||++. +..|+.++|||||||++|||++ ||.. .......
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~----~~~~~~~ 236 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFST----QMERVRT 236 (299)
T ss_dssp C--------------------------CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCC----ccHHHHH
Confidence 32 25999999999954 5789999999999999999997 7753 1111122
Q ss_pred HHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 522 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 522 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+....... .+ +.. . .......+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~--~p----~~~-~-----~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LTDVRNLK--FP----PLF-T-----QKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHTTC--CC----HHH-H-----HHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhcCC--CC----CCC-c-----ccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22222111 11 111 1 11123456888999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=297.22 Aligned_cols=219 Identities=16% Similarity=0.186 Sum_probs=159.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.+.+|+++|++++|||||++++++... +.
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTG-----QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred EEEEecccCeEEEEEEECCCC-----CEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 467999999999999998776 899999997652 333457799999999999999999999998643 57
Q ss_pred eeEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-------
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
.|||||||+ |+|.+++ |+. -|+|++++|+.+..++.++..|||..
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 899999996 6786555 333 47999999998888888888888743
Q ss_pred --------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-cccc
Q 007935 466 --------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-SEVI 536 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~ 536 (584)
..+||+.|||||++.....|+.++||||+||++|||+||+.||.+.. ..+.+.......... ....
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-----~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-----YVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-----HHHHHHHHHHHHCCCCGGGT
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHhcCCCChHHh
Confidence 23799999999986654567999999999999999999999997532 222222221110000 0000
Q ss_pred C----hhhhhhh-----------hH--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 D----PALVKEI-----------HA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d----~~~~~~~-----------~~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ....... .. .....++.+|+.+||+.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 0000000 00 001135677899999999999999999875
No 17
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.6e-34 Score=307.37 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=166.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHH---HHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFES---EVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~---Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..++||+|+||.||+|+...++ +.||||++++.. .......+.+ |+++++.++|||||++++++.+.+..
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg-----~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred EEEEEecccCeEEEEEEECCCC-----CEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 3578999999999999998876 899999997541 1111133334 46677788999999999999999999
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
|||||||+||+|.++| |.. .|+|++++|+.+..++.++..|||.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~ 347 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence 9999999999997665 333 47899999999999999999998853
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+||+.|||||++..+..|+.++||||+||++|||+||+.||.+... .....+.+........++..+++++.+
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--~~~~~i~~~i~~~~~~~p~~~S~~a~d-- 423 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--KDKHEIDRMTLTMAVELPDSFSPELRS-- 423 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--CCHHHHHHHHHHCCCCCCTTSCHHHHH--
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhhcCCCCCCCccCCHHHHH--
Confidence 347999999999976666799999999999999999999999975332 234445555555555566666666654
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCC-----hHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPR-----MRTVS 575 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~ 575 (584)
++.+||+.||.+|++ +.||.
T Consensus 424 -----------LI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 424 -----------LLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp -----------HHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred -----------HHHHHccCCHhHCCCCCCCCHHHHh
Confidence 555699999999998 56665
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.4e-34 Score=288.13 Aligned_cols=160 Identities=18% Similarity=0.266 Sum_probs=131.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+.+... ...+.||||++..... ..++.+|+++|+++ +|||||++++++.++++.|+|||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~--~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQV--GPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTT--SCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEecccCcEEEEEEEcccC--CCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 468999999999999865321 1127899999976432 26788999999998 69999999999999999999999
Q ss_pred cccCCcHHHHH----------------------hcc--cccccCCCCcccccc-CeEEecCCCccc--------------
Q 007935 426 FIRNGSLYAAL----------------------HGF--GLNRLLPGTSKVTKN-ETIVTSGTGSRI-------------- 466 (584)
Q Consensus 426 y~~~GsL~~~L----------------------~~~--g~~~~~~~~~~i~~~-~~~~~~~~~~~~-------------- 466 (584)
||++|+|.+++ |+. -|+|++++|+.+..+ +.++..|||.+.
T Consensus 101 ~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 180 (361)
T 4f9c_A 101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180 (361)
T ss_dssp CCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-
T ss_pred CCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccc
Confidence 99999996555 433 479999999888665 677788887432
Q ss_pred -------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 467 -------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 467 -------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
.+||+.|||||++.....|+.++||||+||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp -------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 269999999999665456999999999999999999999999753
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-33 Score=302.40 Aligned_cols=209 Identities=16% Similarity=0.222 Sum_probs=164.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg-----~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATG-----NNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeccCeEEEEEEECCCC-----CEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999998776 8999999977532 2347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccccc--CeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN--ETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~---------- 466 (584)
|++|+|.++|. +. .|+|++++|+.+..+ +.++..|||.+.
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~ 315 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence 99999977663 22 478889988877654 677888887532
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.+||+.|||||++. +..|+.++||||+||++|||++|+.||.+. ...+...........+.....+.+ .
T Consensus 316 ~~GT~~y~APEv~~-~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~----s- 384 (573)
T 3uto_A 316 TTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDWNMDDSAFSGI----S- 384 (573)
T ss_dssp ECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCCCSGGGTTS----C-
T ss_pred eEECccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhCCCCCCcccccCC----C-
Confidence 37999999999954 578999999999999999999999999742 234444444443332222111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+|+.+||+.||++|||+.|+++
T Consensus 385 ----~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 ----EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 13456788899999999999999986
No 20
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98 E-value=3.7e-32 Score=275.49 Aligned_cols=207 Identities=18% Similarity=0.264 Sum_probs=162.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||+||+|+...++ +.||||++.........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTG-----EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEECCCC-----CEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 468999999999999987765 899999998764444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------------cc
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------~~ 467 (584)
+++|+|.+++. +. .|++++++|+.+..++.++..|||.. ..
T Consensus 90 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~ 169 (347)
T 3zgw_A 90 CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169 (347)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------------
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccccc
Confidence 99999976653 22 46788888888887788888888742 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++.....++.++||||+||++|||++|+.||.+ ................++..+++.+.
T Consensus 170 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~------ 238 (347)
T 3zgw_A 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-----DNVMALYKKIMRGKYDVPKWLSPSSI------ 238 (347)
T ss_dssp --CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTCCHHHH------
T ss_pred CCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence 6899999999965533358999999999999999999999974 33445555555555555555555543
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++.+||+.||++|||+.|+++
T Consensus 239 -------~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 239 -------LLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -------HHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHHHHcccCHhHCcCHHHHhc
Confidence 4666799999999999999985
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.98 E-value=4e-32 Score=272.07 Aligned_cols=215 Identities=25% Similarity=0.381 Sum_probs=167.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|++... .....+.|.+|++++++++|||||++++++.+++..++||||
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~-----~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETG-----EVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTC-----CEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceecCCCCEEEEEEEECCCC-----cEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 568999999999999998765 89999998663 334457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------- 465 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..|+|..
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 999999777643 2 36888889988888888888887744
Q ss_pred ------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc
Q 007935 466 ------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 533 (584)
Q Consensus 466 ------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 533 (584)
...||+.|+|||++. +..++.++|||||||++|||++|..||..................... .+
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 245 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--CP 245 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--CC
T ss_pred ccccccccccccccCCCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--CC
Confidence 235899999999954 478999999999999999999999998753322211111111111111 12
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..+++. +.+++.+||+.||++|||+.|+++.|++++.
T Consensus 246 ~~~~~~-------------l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 246 PNCPPS-------------FFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp TTCCTT-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHH-------------HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 223333 3457777999999999999999999998864
No 22
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.98 E-value=2.9e-32 Score=274.52 Aligned_cols=226 Identities=27% Similarity=0.389 Sum_probs=176.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..++ +.||||++.... ....+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDG------AKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTC------CEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEEC
T ss_pred cceeecCCCeeEEEEEECCC------CEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEc
Confidence 45799999999999997655 799999987653 33457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-----------------------------hccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 427 IRNGSLYAAL-----------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 427 ~~~GsL~~~L-----------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+++|+|.+++ |..| |+++++.|+.+..+..++..++|...
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999986544 4333 67888888888877888888876432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND-GKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||...... ......+....... ..+...+++.+.
T Consensus 197 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 274 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQLEQIVDPNLA 274 (321)
T ss_dssp CBCCCEEETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TCCCSSSSSSCT
T ss_pred cccccCCCccccCHHHhcC-CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-ccHHHhcChhhc
Confidence 247889999998655 57999999999999999999999999764332 23344443333222 223445555443
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
... .......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 275 ~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 275 DKI-RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp TCS-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccc-CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 322 2345677889999999999999999999999999764
No 23
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.98 E-value=5.7e-32 Score=272.53 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=166.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTG-----REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 467999999999999987665 899999997652 33345778999999999999999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------ccc
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------ISA 468 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~ 468 (584)
|+++|+|.+++. +. -|++++++|+.+..+..++..|||.. ...
T Consensus 95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 174 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC 174 (328)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTS
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccccc
Confidence 999999976663 22 46888888888888888888888743 236
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|+|||++......+.++||||+||++|||+||+.||.+ .....+..........++..+++.+
T Consensus 175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~-------- 241 (328)
T 3fe3_A 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----QNLKELRERVLRGKYRIPFYMSTDC-------- 241 (328)
T ss_dssp SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHCCCCCCTTSCHHH--------
T ss_pred CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence 899999999965533345799999999999999999999974 3345555555555555555455544
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+|||+.|+++
T Consensus 242 -----~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 242 -----ENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----HHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHCCCChhHCcCHHHHhc
Confidence 34666799999999999999975
No 24
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.98 E-value=1.1e-31 Score=268.40 Aligned_cols=212 Identities=26% Similarity=0.335 Sum_probs=162.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+.. + ..||||++.... .....++|.+|++++++++|||||++++++.+.+..++||
T Consensus 41 i~~~lG~G~~g~V~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEWH-G------SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp EEEEEEECSSEEEEEEEET-T------EEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred eeeEeecCCCeEEEEEEEC-C------CcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3568999999999999874 3 789999997653 3334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh----------------------------ccc----ccccCCCCccccccCeEEecCCCcc-------
Q 007935 425 DFIRNGSLYAALH----------------------------GFG----LNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~g----~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
||+++|+|.++++ +.| |+++++.|+.+..+..++..++|..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999976653 334 5677778888877778888888743
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh--hcCCCCccccChh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF--RERRPLSEVIDPA 539 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.... ......... .....++..+++.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKCKRLEIPRNLNPQ 267 (309)
T ss_dssp --------CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred cccccCCCCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCCCCCCCccCCHH
Confidence 246899999999955 4678999999999999999999999997432 222222221 1122233344444
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 268 -------------l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 268 -------------VAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp -------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -------------HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 3457777999999999999999999998753
No 25
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=2.6e-32 Score=275.39 Aligned_cols=236 Identities=28% Similarity=0.401 Sum_probs=177.6
Q ss_pred cchhhHhhhc-----ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeee
Q 007935 337 LELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLK 411 (584)
Q Consensus 337 ~~~~~l~~~~-----~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~ 411 (584)
++++++.... .+.||+|+||.||+|+..++ +.||||++...........|.+|++++++++|||||+++
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG------TLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSS------CCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCC------CEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 4455554443 46899999999999987655 789999998764443345799999999999999999999
Q ss_pred EEEEeCCceeEeeecccCCcHHHHH-----------------------------hcc-----cccccCCCCccccccCeE
Q 007935 412 AFYYANDEKLLISDFIRNGSLYAAL-----------------------------HGF-----GLNRLLPGTSKVTKNETI 457 (584)
Q Consensus 412 g~~~~~~~~~lV~Ey~~~GsL~~~L-----------------------------~~~-----g~~~~~~~~~~i~~~~~~ 457 (584)
+++.+.+..++||||+++|+|.+++ |.. .|+++++.|+.+..+..+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 9999999999999999999996555 333 356777788877777778
Q ss_pred EecCCCccc------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC---CCCCCcHHHHH
Q 007935 458 VTSGTGSRI------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP---ENDGKGLESLV 522 (584)
Q Consensus 458 ~~~~~~~~~------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~---~~~~~~l~~~~ 522 (584)
+..++|... ..||+.|+|||++.. ..++.++|||||||++|||+||+.||... .........++
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhcc-CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 888877432 248999999998654 57899999999999999999999999621 12233445555
Q ss_pred HHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 523 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 523 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....... ......+....... .......+.+++.+||+.||.+|||+.||++.|++.
T Consensus 253 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 253 KGLLKEK-KLEALVDVDLQGNY-KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTTSSC-CSTTSSCTTCTTSC-CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHhhch-hhhhhcChhhcccc-CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 4433332 23444444443222 235667889999999999999999999999999864
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=5.5e-32 Score=272.50 Aligned_cols=223 Identities=20% Similarity=0.240 Sum_probs=164.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc----ee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE----KL 421 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~----~~ 421 (584)
..+.||+|+||.||+|+..+ +.||||++..... ....+.+|+.++++++|||||++++++.+... .+
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLLN-------EYVAVKIFPIQDK--QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp EEEEEECSTTCEEEEEEETT-------EEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhheecccCceEEEEEEECC-------CEEEEEEeecCch--HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 35689999999999998763 7999999976422 23567779999999999999999999988554 69
Q ss_pred EeeecccCCcHHHHH------------------------hcc------------cccccCCCCccccccCeEEecCCCcc
Q 007935 422 LISDFIRNGSLYAAL------------------------HGF------------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~------------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
+||||+++|+|.+++ |+. -|+++++.|+.+..+..++..|||..
T Consensus 99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999997654 432 36778888888877778888887643
Q ss_pred c-------------ccCCCcccCccccccC----CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC-----------c
Q 007935 466 I-------------SAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK-----------G 517 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~----~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~-----------~ 517 (584)
. ..||+.|+|||++... ..++.++|||||||++|||+||+.||.+...... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 1 3689999999985532 2456789999999999999999999986443211 1
Q ss_pred HHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 518 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 518 l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+......... ...... ..........+.+++.+||+.||++|||+.||++.|++|++
T Consensus 259 ~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVHKKK--RPVLRD----YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTTSCC--CCCCCG----GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccC--CCCccc----cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2222222222111 111111 11222345568889999999999999999999999999864
No 27
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=4.2e-32 Score=279.36 Aligned_cols=214 Identities=23% Similarity=0.343 Sum_probs=167.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+...++ +.||||.++........++|.+|++++++++|||||+++|+|.+++..++|||
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADN-----TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCCeEEEEEEecCC-----eEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 3578999999999999998654 89999999865444445789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcccc----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRIS---------- 467 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 467 (584)
|+++|+|.++++. . -|+++++.|+.+..++.++..|+|....
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 9999999777642 2 3678888888888788888888874321
Q ss_pred ---cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhh
Q 007935 468 ---AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVK 542 (584)
Q Consensus 468 ---~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~ 542 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||.... ........... ..+.+..+++
T Consensus 273 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 342 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLS-----NQQTREFVEKGGRLPCPELCPD---- 342 (377)
T ss_dssp SCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred CCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 23557999999654 578999999999999999999 999997532 12222222221 1122222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.++++.|++++.
T Consensus 343 ---------~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 343 ---------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 34567888999999999999999999999864
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=268.97 Aligned_cols=216 Identities=25% Similarity=0.354 Sum_probs=167.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+.. ...||||+++........+.|.+|++++++++|||||++++++.+.+..++|||
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 130 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQR--DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSC--CEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred EeeEEEeCCCcEEEEEEEecCCCC--CceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence 357899999999999998754321 267999999876555556789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . .|+++++.|+.+..+..++..|||...
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 210 (325)
T 3kul_A 131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210 (325)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEE
T ss_pred CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceee
Confidence 9999999877642 2 367888888888777888888877432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~ 541 (584)
..+|..|+|||++.. ..++.++|||||||++|||++ |+.||... ............ ..+.+..+++
T Consensus 211 ~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--- 281 (325)
T 3kul_A 211 TTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNM-----TNRDVISSVEEGYRLPAPMGCPH--- 281 (325)
T ss_dssp CC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----CHHHHHHHHHTTCCCCCCTTCCH---
T ss_pred ccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCCCCCCCCCcCH---
Confidence 134667999999654 689999999999999999999 99999742 222333333222 1122222333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.||++.|+++.
T Consensus 282 ----------~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 282 ----------ALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3455778899999999999999999999875
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=5.3e-31 Score=258.22 Aligned_cols=210 Identities=21% Similarity=0.342 Sum_probs=165.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..++ ..||||++....... ++|.+|++++++++||||+++++++.+++..++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp EEEEEECSSCEEEEEEETTT------EEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eheecCCCccEEEEEEecCC------CeEEEEEecccccCH--HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 46799999999999998766 789999998754332 7899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+++...
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 999999777642 2 367778888888777788888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||+|+++|||+| |+.||... ............. ...+...++
T Consensus 167 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------ 234 (269)
T 4hcu_A 167 TKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKPRLAST------ 234 (269)
T ss_dssp TTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCCTTSCH------
T ss_pred cccccccCCHHHhcC-CCCCchhhhHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhcCccCCCCCcCCH------
Confidence 245667999999654 679999999999999999999 99999742 2233333333221 112222333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 235 -------~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 235 -------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 34557778999999999999999999999875
No 30
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=3.1e-31 Score=271.96 Aligned_cols=218 Identities=22% Similarity=0.299 Sum_probs=167.5
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+..... .......||||+++........++|.+|+++++++ +|||||+++++|.+.+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3568999999999999875321 11233789999998765555567899999999999 89999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . .|+++++.|+.+..++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl 244 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 244 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence 9999999999887642 1 36778888888888888888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.|||... ..+|+.|+|||++.. ..++.++|||||||++|||+| |+.||.+... .++....
T Consensus 245 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~~~~~~~ 318 (370)
T 2psq_A 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EELFKLL 318 (370)
T ss_dssp CCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHH
T ss_pred ccccCCcccCcccceecccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHH
Confidence 8887432 245678999998554 689999999999999999999 9999975322 2222222
Q ss_pred hhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.... ...+..+++ .+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 319 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 319 KEGHRMDKPANCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HTTCCCCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2221 112222222 3456778899999999999999999999874
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=3.5e-31 Score=263.35 Aligned_cols=206 Identities=18% Similarity=0.255 Sum_probs=159.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||++..... ...+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTC-----CEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeccCCCeEEEEEEECCCC-----cEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 357999999999999987665 8999999976432 2347799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.++++ .. -|+++++.|+.+..++.++..|||.. ...|
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 178 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccC
Confidence 99999976653 33 36788888888888888888888742 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhhhhhhhHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPALVKEIHAK 547 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~ 547 (584)
|+.|+|||++.. ..++.++|||||||++|||+||+.||.... .............. ..++.+++
T Consensus 179 t~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------- 244 (297)
T 3fxz_A 179 TPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRALYLIATNGTPELQNPEKLSA--------- 244 (297)
T ss_dssp CGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHHHHCSCCCSCGGGSCH---------
T ss_pred CcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCCCCccccCH---------
Confidence 999999999554 689999999999999999999999997422 11221111111111 11222222
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 245 ----~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 245 ----IFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----HHHHHHHHHccCChhHCcCHHHHhh
Confidence 3455777899999999999999975
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=5.8e-31 Score=263.15 Aligned_cols=224 Identities=27% Similarity=0.366 Sum_probs=170.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
+.||+|+||.||+|... + +.||||++.... .....+.|.+|++++++++||||+++++++.+.+..++||
T Consensus 37 ~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYVN-N------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp CEEEECSSEEEEEEESS-S------CEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CccccCCCeEEEEEEEC-C------ceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 67999999999999873 3 689999997542 2233578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh----------------------------cc--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAALH----------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~----------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++. +. .|+++.+.|+.+..+..++..+++..
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 189 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence 9999999977764 22 35777778887777777777777632
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
...||+.|+|||.+ . ..++.++||||||+++|||+||+.||...... ..+..+..........+.+.+++.+.
T Consensus 190 ~~~~~~~g~~~y~aPE~~-~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
T 2nru_A 190 VMTSRIVGTTAYMAPEAL-R-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMN 266 (307)
T ss_dssp EECSSCCSCGGGCCHHHH-T-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSCS
T ss_pred ccccccCCCcCcCChHHh-c-CCCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhhhhhhhhhhcccccc
Confidence 13588999999984 4 35899999999999999999999999864332 22333333333333333333333322
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ........+.+++.+||+.||.+|||+.||++.|+++++
T Consensus 267 ~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 267 D--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp C--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred c--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1 122345678889999999999999999999999999864
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=6e-31 Score=257.67 Aligned_cols=211 Identities=21% Similarity=0.346 Sum_probs=164.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||||+++...... +++.+|++++.+++||||+++++++.+++..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQ------YDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECBTTBCH--HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeeeccCCCceEEEEEecCc------eeEEEEEeccCCCcH--HHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 46799999999999988765 789999998754332 7799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 999999776642 2 367788888888777778888876432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............. ..+...++
T Consensus 165 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 232 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGHRLYRPHLASD------ 232 (268)
T ss_dssp CCCCGGGCCHHHHHH-SEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCCCCTTSCH------
T ss_pred CCcCcccCCHHHHhc-cCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCCCCCCCCcChH------
Confidence 235567999999544 678999999999999999999 999997422 2223333222221 12222333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 233 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 233 -------TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 345577789999999999999999999999764
No 34
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=271.63 Aligned_cols=218 Identities=22% Similarity=0.278 Sum_probs=165.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++.........+.||||+++.........+|.+|+.++++++|||||++++++.+.+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 46899999999999997653333334799999998655555557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------c--cccccCCCCccccccC---eEEecCCCccc---
Q 007935 427 IRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKNE---TIVTSGTGSRI--- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~~---~~~~~~~~~~~--- 466 (584)
+++|+|.++++. . -|++++++|+.+..++ .++..|||...
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~ 235 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccc
Confidence 999999777642 2 3677888888776443 47777776432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
..||+.|+|||++.. ..++.++|||||||++|||+| |+.||... .............. ..+.
T Consensus 236 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~ 309 (367)
T 3l9p_A 236 RAGYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTSGGRMDPPK 309 (367)
T ss_dssp HHSSCTTCCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHTTCCCCCCT
T ss_pred cccccccCCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCCCCc
Confidence 356889999998655 689999999999999999998 99999742 22333333333221 1122
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+++ .+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 310 ~~~~-------------~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 310 NCPG-------------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCH-------------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 2222 34567888999999999999999999988753
No 35
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=2.8e-31 Score=267.22 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||++.........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTE-----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEecCCCEEEEEEEECCCC-----cEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 467999999999999988665 899999997654433447899999999999999999999999999999999999
Q ss_pred ccCCcHHH-------------------------HHhccc--ccccCCCCccccccCeEEecCCCcc-------------c
Q 007935 427 IRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------------I 466 (584)
Q Consensus 427 ~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------------~ 466 (584)
+++|+|.+ |||+.| |++++++|+.+..++.++..|+|.. .
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence 99999854 445444 6788888888888788888888743 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||............+... .........+++
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 236 (323)
T 3tki_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDS-------- 236 (323)
T ss_dssp CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT--CTTSTTGGGSCH--------
T ss_pred CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc--cccCCccccCCH--------
Confidence 3689999999996654345789999999999999999999998644332222222111 001011122222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 237 -----APLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHccCChhhCcCHHHHhh
Confidence 3456778899999999999999975
No 36
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97 E-value=5.9e-31 Score=257.98 Aligned_cols=212 Identities=22% Similarity=0.307 Sum_probs=157.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV 423 (584)
.+.||+|+||.||+|+.. + ..||||+++... .....+.|.+|+.++++++|||||++++++.+. +..++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~------~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-G------NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp EEEEEEETTEEEEEEEET-T------EEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhcCCCcceEEEEEEC-C------eeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 468999999999999985 3 789999998653 333457899999999999999999999999887 778999
Q ss_pred eecccCCcHHHHHh---------------------------ccc----ccccCCCCccccccCeEEec--CCCc----cc
Q 007935 424 SDFIRNGSLYAALH---------------------------GFG----LNRLLPGTSKVTKNETIVTS--GTGS----RI 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~---------------------------~~g----~~~~~~~~~~i~~~~~~~~~--~~~~----~~ 466 (584)
|||+++|+|.++++ +.| |+++.+.|+.+..++..... +++. ..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~ 167 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG 167 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence 99999999976664 323 55666677766666554443 3332 23
Q ss_pred ccCCCcccCccccccCCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccChhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQ---KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDPALV 541 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~---ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~~~~ 541 (584)
..||+.|+|||++.. ..++. ++|||||||++|||+||+.||.... ............ ...+..+++.
T Consensus 168 ~~~t~~y~aPE~~~~-~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (271)
T 3kmu_A 168 RMYAPAWVAPEALQK-KPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEGLRPTIPPGISPH-- 239 (271)
T ss_dssp CBSCGGGSCHHHHHS-CGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSCCCCCCCTTCCHH--
T ss_pred ccCCccccChhhhcc-CCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcCCCCCCCCCCCHH--
Confidence 468999999998554 33333 8999999999999999999997422 222222222221 2223333333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 240 -----------~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 240 -----------VSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred -----------HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 44577779999999999999999999999764
No 37
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=1.2e-30 Score=265.20 Aligned_cols=218 Identities=22% Similarity=0.299 Sum_probs=169.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..........+.||||.++........+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 46799999999999998753322333799999998765555557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc-------------------------------------------------c--cccccCCCCccccccC
Q 007935 427 IRNGSLYAALHG-------------------------------------------------F--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------------------------------~--g~~~~~~~~~~i~~~~ 455 (584)
+++|+|.++++. . -|+++++.|+.+..+.
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~ 211 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 211 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCC
Confidence 999999887643 1 3577788888887777
Q ss_pred eEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHH
Q 007935 456 TIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 521 (584)
Q Consensus 456 ~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~ 521 (584)
.++..|+|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+. .....
T Consensus 212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~-----~~~~~ 285 (343)
T 1luf_A 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGM-----AHEEV 285 (343)
T ss_dssp CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHH
T ss_pred eEEEeecCCCcccccCccccccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCC-----ChHHH
Confidence 88888886431 356788999998654 679999999999999999999 99999742 22333
Q ss_pred HHHHhhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 522 VRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 522 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
......... ..+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~-------------~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 286 IYYVRDGNILACPENCPL-------------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHHHHTTCCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHhCCCcCCCCCCCCH-------------HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 333322221 12222332 34567788999999999999999999999865
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=1e-30 Score=262.89 Aligned_cols=205 Identities=19% Similarity=0.241 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||++..... ...+.+.+|+.++++++|||||++++++...+..++||||
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSG-----RQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTC-CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cEEeccCCCeEEEEEEECCCC-----cEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 358999999999999987654 8999999976432 3347799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++. .. -|++++++|+.+..++.++..|+|.. ...|
T Consensus 124 ~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 203 (321)
T 2c30_A 124 LQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 203 (321)
T ss_dssp CCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCS
T ss_pred CCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccC
Confidence 99999976653 33 36788888888887788888887632 2368
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhhhhhhhH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPALVKEIHA 546 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~~~~~~~ 546 (584)
|+.|+|||++.. ..++.++|||||||++|||+||+.||... ..............+ ....+++
T Consensus 204 t~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------- 269 (321)
T 2c30_A 204 TPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAMKRLRDSPPPKLKNSHKVSP-------- 269 (321)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSCCCCTTGGGSCH--------
T ss_pred CccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCCCCcCccccCCH--------
Confidence 999999999544 68999999999999999999999999742 122222222222211 0111222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 270 -----~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 270 -----VLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3456777899999999999999986
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=3.9e-31 Score=271.48 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=160.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+....+. ....||||+++........++|.+|++++++++|||||++++++.+.+..++|||
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 126 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSK--KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTS--CBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEEeeCCCeEEEEEEEecCCC--CceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence 35789999999999998863211 1168999999876545556789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 206 (373)
T 2qol_A 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206 (373)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------
T ss_pred CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcccee
Confidence 9999999877753 2 367788888888777778888876432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhh
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALV 541 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~ 541 (584)
..++..|+|||++.. ..++.++|||||||++|||++ |+.||.... ............ .+....++
T Consensus 207 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~---- 276 (373)
T 2qol_A 207 TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGYRLPPPMDCP---- 276 (373)
T ss_dssp -------CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHHHHHHTTEECCCCTTCB----
T ss_pred ccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccc----
Confidence 124567999999654 689999999999999999998 999997432 222222222211 11111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.||++||++.||+++|+++.
T Consensus 277 ---------~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 277 ---------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 24566888899999999999999999999874
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=1.3e-30 Score=263.27 Aligned_cols=206 Identities=20% Similarity=0.274 Sum_probs=164.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++++.. .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATG-----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 468999999999999988765 899999997641 2233467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------c
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~ 466 (584)
||+++|+|.+++ |+. .|++++++|+.+..++.++..++|.. .
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 164 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccc
Confidence 999999996555 333 46888888888888888888887643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... ....+..........++..+++.+.
T Consensus 165 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~~----- 233 (337)
T 1o6l_A 165 FCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEIRFPRTLSPEAK----- 233 (337)
T ss_dssp CEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH-----
T ss_pred cccChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 36899999999954 468999999999999999999999999742 2344444444444444555555543
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+++.+||+.||++|| ++.|+++
T Consensus 234 --------~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 234 --------SLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --------HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------HHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 466669999999999 8888864
No 41
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=9.5e-31 Score=259.89 Aligned_cols=216 Identities=22% Similarity=0.279 Sum_probs=164.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||+|.+... ......+.|.+|+.++++++|||||++++++.+++..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILN-----IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----SEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----CeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 467999999999999987665 89999998654 22334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++|+|.+++. +. -|+++++.|+.+..++.++..|+|...
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 170 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccC
Confidence 9999999976654 22 367888888888778888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~~~~ 544 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ..............+ ......+.+
T Consensus 171 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---- 240 (294)
T 4eqm_A 171 HVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGE-----TAVSIAIKHIQDSVPNVTTDVRKDI---- 240 (294)
T ss_dssp ----CCSSCCHHHHH-TCCCCTTHHHHHHHHHHHHHHHSSCSSCSS-----CHHHHHHHHHSSCCCCHHHHSCTTS----
T ss_pred ccccCccccCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhhccCCCcchhcccCC----
Confidence 35899999999954 468899999999999999999999999752 222222222222211 111111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i~ 582 (584)
...+.+++.+||+.||++|| +++++.+.|+++.
T Consensus 241 -----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 241 -----PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp -----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred -----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 12455688889999999998 9999999998864
No 42
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=7.3e-31 Score=268.50 Aligned_cols=220 Identities=21% Similarity=0.309 Sum_probs=167.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCc-eeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDE-KLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~-~~lV 423 (584)
..+.||+|+||.||+|++.+.......+.||||+++........+.|.+|++++.++ +|||||+++++|.+.+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 356899999999999996554444445899999998765555557899999999999 89999999999988655 8999
Q ss_pred eecccCCcHHHHHhc-----------------------------------------------------------------
Q 007935 424 SDFIRNGSLYAALHG----------------------------------------------------------------- 438 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~----------------------------------------------------------------- 438 (584)
|||+++|+|.++++.
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 999999999877642
Q ss_pred --------------------------c--cccccCCCCccccccCeEEecCCCccc-------------ccCCCcccCcc
Q 007935 439 --------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-------------SAISNVYLAPE 477 (584)
Q Consensus 439 --------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~gt~~y~aPE 477 (584)
. -|+++++.|+.+..+..++..|+|... ..||..|+|||
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE 265 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHH
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChh
Confidence 1 356777778777777778888876432 24677899999
Q ss_pred ccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHH
Q 007935 478 ARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556 (584)
Q Consensus 478 ~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 556 (584)
++.. ..++.++|||||||++|||+| |+.||.+..... .+...+.. ......+..+++. +.++
T Consensus 266 ~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~-------------l~~l 328 (359)
T 3vhe_A 266 TIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE--GTRMRAPDYTTPE-------------MYQT 328 (359)
T ss_dssp HHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHH--TCCCCCCTTCCHH-------------HHHH
T ss_pred hhcC-CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHc--CCCCCCCCCCCHH-------------HHHH
Confidence 8654 689999999999999999999 999997643321 11111111 1122223333333 4457
Q ss_pred HhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 557 ALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 557 ~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+||+.||++|||+.|+++.|+++.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 77799999999999999999999875
No 43
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=1.9e-30 Score=261.74 Aligned_cols=216 Identities=21% Similarity=0.322 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|++...+... ...||+|.++........++|.+|+.++++++|||||+++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----C-CEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceE-EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 468999999999999986654222 2568999987654444558899999999999999999999999875 48899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+||...
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 177 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-----
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccccccc
Confidence 999999777643 2 468888889888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||..... ..+...+.... ..+.+...++
T Consensus 178 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~--~~~~~~~~~~------ 246 (327)
T 3poz_A 178 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGE--RLPQPPICTI------ 246 (327)
T ss_dssp --CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTC--CCCCCTTBCH------
T ss_pred CCCccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCC--CCCCCccCCH------
Confidence 245778999999654 689999999999999999999 9999975332 22222222111 1112222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 -------~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 247 -------DVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -------HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3456888899999999999999999998875
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=1.7e-30 Score=264.89 Aligned_cols=210 Identities=16% Similarity=0.182 Sum_probs=160.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||.++..... ...+.+.+|+.++++++|||||++++++.+.+..+
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTG-----LEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eeEEeeCcCEEEEEEEECCCC-----CEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 468999999999999988765 89999999765321 12467999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc-----
Q 007935 422 LISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR----- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~----- 465 (584)
+||||+++|+|.+++. .. .|++++++|+.+..++ .++..|+|..
T Consensus 92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 9999999999977663 33 3677888887776554 5777777643
Q ss_pred -----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 -----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............+. +..
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~~~~----~~~ 241 (361)
T 2yab_A 172 GVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITAVSYDFD----EEF 241 (361)
T ss_dssp TCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCCC----HHH
T ss_pred CCccccCCCCccEECchHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCC----chh
Confidence 236899999999954 468999999999999999999999999752 22333334333332221 111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ ...+.+++.+||..||++|||+.|+++
T Consensus 242 ~~~~-----s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 FSQT-----SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTTS-----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCC-----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111 124556888899999999999999974
No 45
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=1.5e-30 Score=274.44 Aligned_cols=210 Identities=27% Similarity=0.408 Sum_probs=164.9
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|...++ ..||||+++.... ..+.|.+|+++|++++|||||++++++. .+..++|||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~------~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTT------EEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred EEEEcccCCceEEEEEEECCc------cEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 356899999999999998765 7899999986533 3488999999999999999999999986 677999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|||...
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 9999999877752 2468888888888888888888887543
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 343 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 412 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGYRMPRPENCPE---- 412 (454)
T ss_dssp CSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHHTCCCCCCTTSCH----
T ss_pred CCCcccccccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 135668999999655 579999999999999999999 999997532 222222222221 111222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++||||.+|++.|+++..
T Consensus 413 ---------~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 413 ---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ---------HHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 45568888999999999999999999998753
No 46
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.97 E-value=9.1e-31 Score=256.79 Aligned_cols=209 Identities=23% Similarity=0.377 Sum_probs=154.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc---chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|... + ..||||+++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-G------DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp EEEEEEETTEEEEEEEET-T------EEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred eeeeccCCCeEEEEEEEc-C------CeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999975 3 7899999876422 22347799999999999999999999999999999999
Q ss_pred eecccCCcHHHH------------------------Hhccc-----ccccCCCCccccc--------cCeEEecCCCccc
Q 007935 424 SDFIRNGSLYAA------------------------LHGFG-----LNRLLPGTSKVTK--------NETIVTSGTGSRI 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~------------------------L~~~g-----~~~~~~~~~~i~~--------~~~~~~~~~~~~~ 466 (584)
|||+++|+|.++ ||+.| |++++++|+.+.. +..++..++|...
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999999544 45556 8888888887764 4556777776432
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEV 535 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~ 535 (584)
..||+.|+|||++.. ..++.++||||||+++|||+||+.||.... ............ .+.+..
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNKLALPIPST 238 (271)
T ss_dssp -----------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSCCCCCCCTT
T ss_pred ccccccccCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCCCCCCCCcc
Confidence 368999999998554 678999999999999999999999997522 122222222221 112222
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
+++ .+.+++.+||+.||++|||+.|+++.|++|
T Consensus 239 ~~~-------------~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 239 CPE-------------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCH-------------HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 232 345677889999999999999999999875
No 47
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=1.4e-30 Score=259.59 Aligned_cols=218 Identities=21% Similarity=0.281 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeC----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAN----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~----~~~ 420 (584)
.+.||+|+||.||+|+.. + +.||||++.... .+.+.+|.+++.. ++|||||++++++.+. +..
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSWQ-G------ENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp EEEEEECSSEEEEEEEET-T------EEEEEEEECGGG----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEeeccCCCcEEEEEEEC-C------EEEEEEEecccc----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 467999999999999873 3 799999997532 2567778887777 7999999999997663 458
Q ss_pred eEeeecccCCcHHHH------------------------Hh--------cc--cccccCCCCccccccCeEEecCCCccc
Q 007935 421 LLISDFIRNGSLYAA------------------------LH--------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~------------------------L~--------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
++||||+++|+|.++ || .. -|++++++|+.+..+..++..|||...
T Consensus 82 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 999999999999654 45 33 367788888888777888888887431
Q ss_pred ---------------ccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCCC
Q 007935 467 ---------------SAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTG----------RLPDAGPENDGK 516 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~~ 516 (584)
..||+.|+|||++.... .++.++|||||||++|||+|| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 26899999999865422 345799999999999999999 888876554444
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
....+.......... ....+.. ........+.+++.+||+.||++|||+.||++.|++|
T Consensus 242 ~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDMRKVVCVDQQR--PNIPNRW----FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHTTSCCC--CCCCGGG----GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhhhHHHhccCCC--CCCChhh----ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 444443333222211 1111111 1223445778899999999999999999999999987
No 48
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=2e-30 Score=272.96 Aligned_cols=210 Identities=25% Similarity=0.385 Sum_probs=164.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC-ceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-~~~lV~ 424 (584)
..+.||+|+||.||+|...+ +.||||+++... ..+.|.+|+++|++++|||||++++++.+.+ ..++||
T Consensus 197 ~~~~lG~G~fg~V~~~~~~~-------~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp EEEEEEECSSEEEEEEEETT-------EEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred EEeeecCcCCeeEEEEEecC-------CeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 35789999999999998853 789999998643 3378999999999999999999999998765 789999
Q ss_pred ecccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc--------c
Q 007935 425 DFIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI--------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~ 467 (584)
|||++|+|.++++. ..|+++++.|+.+..++.++..|||... .
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999877753 1367888888888888888888887532 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
.++..|+|||++.. ..++.++|||||||++|||+| |+.||...... .....+.... ..+.+..+++
T Consensus 347 ~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~--~~~~p~~~~~-------- 413 (450)
T 1k9a_A 347 KLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY--KMDAPDGCPP-------- 413 (450)
T ss_dssp CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTC--CCCCCTTCCH--------
T ss_pred CCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--CCCCCCcCCH--------
Confidence 56788999999554 689999999999999999999 99999864332 2222222111 1122233333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 414 -----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 414 -----AVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 34567788999999999999999999999864
No 49
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=4.1e-30 Score=269.02 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=158.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||+|.+.... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~-----~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAG-----QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTT-----EEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEeccCCCeEEEEEEECCCC-----cEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 468999999999999987766 899999997653 23334679999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccc---cCeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTK---NETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |+. -|++++++|+.+.. +..++..|+|..
T Consensus 91 ~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~ 170 (444)
T 3soa_A 91 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170 (444)
T ss_dssp CCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee
Confidence 99999996555 333 46888899988763 356777777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++||||+||++|||++|+.||.+. ...............++ ..+++
T Consensus 171 ~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~-- 242 (444)
T 3soa_A 171 FGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDE-----DQHRLYQQIKAGAYDFPSPEWDTVTP-- 242 (444)
T ss_dssp CCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCTTTTTTSCH--
T ss_pred ecccCCcccCCHHHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHhCCCCCCccccccCCH--
Confidence 236899999999954 468999999999999999999999999742 22333333333322221 12233
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 243 -----------~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 243 -----------EAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -----------HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----------HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3445777799999999999999986
No 50
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=2.4e-30 Score=255.54 Aligned_cols=210 Identities=19% Similarity=0.292 Sum_probs=162.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....+ ..||||+++...... ++|.+|++++.+++||||+++++++.+.+..++||||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp EEECC---CEEEEEEEETTT------EEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HhhcCCCCCceEEEEEEcCC------CeEEEEEecCCCCCH--HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 46899999999999998865 789999998754333 7899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..+++...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 999999777643 2 367788888888777888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............ ...+...++
T Consensus 181 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 248 (283)
T 3gen_A 181 SKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASE------ 248 (283)
T ss_dssp TTSCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCCCCTTCCH------
T ss_pred CccCcccCCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccC-----hhHHHHHHhcccCCCCCCcCCH------
Confidence 245678999999654 578999999999999999999 999997422 222333332221 112223333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 249 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 249 -------KVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp -------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 34557778999999999999999999998754
No 51
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.6e-30 Score=261.41 Aligned_cols=208 Identities=16% Similarity=0.213 Sum_probs=161.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSK-----KTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCCTH--HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred eeEEecCCCeEEEEEEECCCC-----cEEEEEEEecCcc--cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999988766 8999999976432 336789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccc--cCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTK--NETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~--~~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++.. . .|++++++|+.+.. +..++..|+|...
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 162 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence 999999776642 2 36778888887765 5677777777432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++.. ..++.++|||||||++|||++|+.||.+. ................. +.....+
T Consensus 163 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~----~~~~~~~-- 230 (321)
T 1tki_A 163 LFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAE-----TNQQIIENIMNAEYTFD----EEAFKEI-- 230 (321)
T ss_dssp EESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCC----HHHHTTS--
T ss_pred ccCChhhcCcHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcCC-----CHHHHHHHHHcCCCCCC----hhhhccC--
Confidence 358999999999544 67899999999999999999999999742 22334444443332221 1111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++.+++.+||+.||++|||+.|+++
T Consensus 231 ---s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 231 ---SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 124567888999999999999999986
No 52
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=258.11 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=165.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV~ 424 (584)
.++||+|+||.||+|+....+ +.||||+++........+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTG-----DLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEecCCCCeEEEEEEECCCC-----cEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 467999999999999998765 8999999986544444578899999999999999999999998765 679999
Q ss_pred ecccCCcHHHHHhc----------------------------c--cccccCCCCccc----cccCeEEecCCCcc-----
Q 007935 425 DFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKV----TKNETIVTSGTGSR----- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i----~~~~~~~~~~~~~~----- 465 (584)
||+++|+|.+++.. . -|+++++.|+.+ ..+..++..|||..
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 99999999777643 2 367788888766 33345667777643
Q ss_pred -----cccCCCcccCcccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 -----ISAISNVYLAPEARIY-------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~-------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. +..++.++|||||||++|||+||+.||....... .....+.......+. .
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-GCHHHHHHHHHHCCTTC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-hhHHHHHHHhcCCCccc
Confidence 2358999999998542 3678999999999999999999999997543322 223333333332211 0
Q ss_pred ccc----------cChhhhh-hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 533 SEV----------IDPALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 533 ~~~----------~d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
... .++.+.. ..........+.+++.+||+.||++|||++|+++...+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 000 0000000 001123344667899999999999999999999887654
No 53
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=2.5e-30 Score=264.31 Aligned_cols=207 Identities=18% Similarity=0.264 Sum_probs=159.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCC-----CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3568999999999999987765 899999997653 3334577999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCcccccc---CeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN---ETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++ |.. .|++++++|+.+..+ ..++..|||..
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~ 187 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence 999999996655 333 467788888777654 34677777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ....+...........+ ..+++
T Consensus 188 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~-- 259 (362)
T 2bdw_A 188 HGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQIKAGAYDYPSPEWDTVTP-- 259 (362)
T ss_dssp CCSCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCTTGGGGSCH--
T ss_pred ccCCCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCcccccCCCH--
Confidence 236899999999954 468999999999999999999999999742 22333333333322211 12222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 260 -----------~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 260 -----------EAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----------HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3456778899999999999999875
No 54
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=1.3e-30 Score=277.63 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=166.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+...+ ..||||.++.... ..++|.+|+++|++++|||||+++++|.+.+..++|||
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~-----~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGT-----EEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEecCCCCeEEEEEEEcCCC-----eEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4578999999999999998754 8999999986533 34789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. . .|+++++.|+.+..+..++..|||...
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 9999999877753 1 367888888888777888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+...+.... ....+..+++
T Consensus 377 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~--~~~~~~~~~~----- 446 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY--RMERPEGCPE----- 446 (495)
T ss_dssp TTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC--CCCCCTTCCH-----
T ss_pred CCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--CCCCCCCCCH-----
Confidence 134568999999655 679999999999999999999 99999753321 2222222111 1111222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||||.||++.|+.+.
T Consensus 447 --------~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 447 --------KVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999874
No 55
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=2.2e-30 Score=255.61 Aligned_cols=216 Identities=20% Similarity=0.324 Sum_probs=160.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+. ....||+|+++........+.|.+|+.++++++|||||++++++ .++..++|||
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 95 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPEN--PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 95 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred EEeEeeecCCeeEEEEEEecCCC--CceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEe
Confidence 35689999999999999865421 12689999998765555567899999999999999999999997 5567899999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . -|+++++.|+.+..++.++..|+|...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175 (281)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccc
Confidence 9999999777642 2 367788888888878888888877432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..+|+.|+|||++.. ..++.++|||||||++|||++ |+.||.+.... ... ...... ..+.+..+++
T Consensus 176 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~---~~i~~~~~~~~~~~~~~----- 244 (281)
T 1mp8_A 176 KGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVI---GRIENGERLPMPPNCPP----- 244 (281)
T ss_dssp ---CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH---HHHHTTCCCCCCTTCCH-----
T ss_pred cCCCcccccChhhccc-CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHH---HHHHcCCCCCCCCCCCH-----
Confidence 245678999999654 678999999999999999997 99999753321 122 222221 1222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 245 --------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 245 --------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 34457777999999999999999999998743
No 56
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=3.5e-30 Score=265.09 Aligned_cols=207 Identities=14% Similarity=0.223 Sum_probs=160.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~-----~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTD-----RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTT-----EEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 3568999999999999998776 899999998652 223346688999999987 89999999999999999999
Q ss_pred eeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 423 ISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||||+++|+|..+++ .. .|++++++|+.+..++.++..|+|..
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~ 210 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcc
Confidence 999999999965553 33 46888899998888888888888743
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----CCcHHHHHHHHhhcCCCCccccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----GKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||...... ......+..........++..+++.+
T Consensus 211 ~~~~gt~~Y~aPE~l~-~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 289 (396)
T 4dc2_A 211 STFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289 (396)
T ss_dssp CCCCBCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred ccccCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHH
Confidence 236899999999955 478999999999999999999999999743221 11223334444444444555555554
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
. +++.+||+.||++||++
T Consensus 290 ~-------------~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 290 A-------------SVLKSFLNKDPKERLGC 307 (396)
T ss_dssp H-------------HHHHHHTCSCTTTSTTC
T ss_pred H-------------HHHHHHhcCCHhHcCCC
Confidence 3 46666999999999996
No 57
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=258.00 Aligned_cols=208 Identities=27% Similarity=0.428 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+..+ +.||||++.... ..+.|.+|++++++++|||||++++++. +..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWRA-------KDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp EEEEECCSSSEEEEEEETT-------EEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred eeEeecCCCceEEEEEECC-------eeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 4679999999999998753 789999997532 3478999999999999999999999876 458999999
Q ss_pred ccCCcHHHHHh----------------------------c-----ccccccCCCCccccccCe-EEecCCCcc-------
Q 007935 427 IRNGSLYAALH----------------------------G-----FGLNRLLPGTSKVTKNET-IVTSGTGSR------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~----------------------------~-----~g~~~~~~~~~~i~~~~~-~~~~~~~~~------- 465 (584)
+++|+|.++++ . ..|+++++.|+.+..++. ++..++|..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 99999976653 3 235666777777666654 567777643
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-cCCCCccccChhhhhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLSEVIDPALVKE 543 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~ 543 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||...... .......... ...+....+++
T Consensus 161 ~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----- 231 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---AFRIMWAVHNGTRPPLIKNLPK----- 231 (307)
T ss_dssp ----CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---HHHHHHHHHTTCCCCCBTTCCH-----
T ss_pred ccCCCCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---HHHHHHHHhcCCCCCcccccCH-----
Confidence 236899999999954 468999999999999999999999999753322 1222222222 12222222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 232 --------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 232 --------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 34557788999999999999999999998753
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=2.2e-30 Score=259.71 Aligned_cols=220 Identities=25% Similarity=0.380 Sum_probs=168.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|......+......||||+++........+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 35689999999999998754333333489999999876555556889999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-------------------------------------------------c--cccccCCCCcccccc
Q 007935 426 FIRNGSLYAALHG-------------------------------------------------F--GLNRLLPGTSKVTKN 454 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------------------------------~--g~~~~~~~~~~i~~~ 454 (584)
|+++|+|.++++. . -|+++++.|+.+..+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC
Confidence 9999999887742 1 357777888888777
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~ 520 (584)
..++..++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+..
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~ 263 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFN 263 (314)
T ss_dssp TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH
Confidence 788888876432 245678999998654 678999999999999999999 99999753321 2222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+... .....+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 264 ~~~~~--~~~~~~~~~~~-------------~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 264 LLKTG--HRMERPDNCSE-------------EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHTT--CCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcC--CcCCCCccCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22111 11112222333 34557778999999999999999999998754
No 59
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=3.6e-30 Score=258.19 Aligned_cols=206 Identities=19% Similarity=0.242 Sum_probs=164.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||+|+++... .....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNG-----RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 468999999999999988765 899999997642 2223467889999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.++++ .. -|++++++|+.+..++.++..++|.. ...|
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g 165 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG 165 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence 9999999976664 33 36788888888888888888888743 2478
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............++..+++.+.
T Consensus 166 t~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~~-------- 231 (318)
T 1fot_A 166 TPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDS-----NTMKTYEKILNAELRFPPFFNEDVK-------- 231 (318)
T ss_dssp CTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH--------
T ss_pred CccccCHhHhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHHH--------
Confidence 99999999954 468999999999999999999999999742 2334444555544444555555443
Q ss_pred HHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+++.+|++.||++|| ++.|+++
T Consensus 232 -----~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 232 -----DLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----HHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 466669999999999 8888864
No 60
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=2.6e-30 Score=255.86 Aligned_cols=212 Identities=25% Similarity=0.349 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch------hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW------RFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||++....... ..+.|.+|++++++++||||+++++++.+..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDK-----SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTC-----CEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred hhccccCCceeEEEEEEcCCc-----eEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 467999999999999987665 899999997642221 1267999999999999999999999985543
Q ss_pred eEeeecccCCcHHHHH--------------------------hccc----ccccCCCCccccccCe-----EEecCCCcc
Q 007935 421 LLISDFIRNGSLYAAL--------------------------HGFG----LNRLLPGTSKVTKNET-----IVTSGTGSR 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L--------------------------~~~g----~~~~~~~~~~i~~~~~-----~~~~~~~~~ 465 (584)
++||||+++|+|.+++ |..| |+++++.|+.+..+.. ++..++|..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 7999999999996554 4434 5677777777765544 677777643
Q ss_pred --------cccCCCcccCccccc-cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcc
Q 007935 466 --------ISAISNVYLAPEARI-YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSE 534 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~-~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~ 534 (584)
...||+.|+|||++. .+..++.++|||||||++|||++|+.||....... .......... ....+.
T Consensus 177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMIREEGLRPTIPE 253 (287)
T ss_dssp BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHHHHSCCCCCCCT
T ss_pred ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHHhccCCCCCCCc
Confidence 246899999999853 23467899999999999999999999997543322 1112222211 112223
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 581 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i 581 (584)
.+++ .+.+++.+||+.||++|||+.|+++.|+++
T Consensus 254 ~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPP-------------RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCH-------------HHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 3333 345577779999999999999999999875
No 61
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=2e-30 Score=256.80 Aligned_cols=217 Identities=19% Similarity=0.269 Sum_probs=162.5
Q ss_pred ceeceeecCceEEEEEecCCCCC--CCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~--~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+.. .....||+|.+.... ....+.|.+|++++++++|||||++++++.+++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 46799999999999998765321 112579999997643 334478999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCe--------EEecCCCccc--
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNET--------IVTSGTGSRI-- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~--------~~~~~~~~~~-- 466 (584)
||+++|+|.++++. . -|++++++|+.+..+.. ++..+++...
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~ 171 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence 99999999777643 2 36778888887766654 7777777543
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.....++.++|||||||++|||+||..|+... ....... ........++...++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l- 245 (289)
T 4fvq_A 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA----LDSQRKL-QFYEDRHQLPAPKAAEL- 245 (289)
T ss_dssp SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT----SCHHHHH-HHHHTTCCCCCCSSCTT-
T ss_pred cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc----cchHHHH-HHhhccCCCCCCCCHHH-
Confidence 257889999998654367899999999999999999965554321 1112111 22222333334444444
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+++.+||+.||++|||+.|+++.|+++.
T Consensus 246 ------------~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 246 ------------ANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp ------------HHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred ------------HHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 34667799999999999999999999874
No 62
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=259.37 Aligned_cols=211 Identities=17% Similarity=0.224 Sum_probs=159.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..+.||+|+||.||+|....++ +.||||.++..... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTG-----LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTC-----CEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred eceEEeeCCCeEEEEEEECCCC-----cEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3568999999999999988765 89999999764221 1247799999999999999999999999999999
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~---- 465 (584)
++||||+++|+|.+++. .. -|+++++.|+.+..++ .++..++|..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999977664 22 3677888887776655 5777777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||.+. .................. .
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~----~ 239 (326)
T 2y0a_A 170 FGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANVSAVNYEFED----E 239 (326)
T ss_dssp TTSCCCCCCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHTCCCCCH----H
T ss_pred CCCccccccCCcCcCCceeec-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHHhcCCCcCc----c
Confidence 236899999999854 468999999999999999999999999742 222333332222222111 1
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... ....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~-----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 240 YFSN-----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHTT-----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccc-----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 1124556888899999999999999986
No 63
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=4e-30 Score=263.74 Aligned_cols=209 Identities=16% Similarity=0.237 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||+|.+.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTK-----KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 468999999999999988776 899999997542 2233478899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++|+|.++++ .. .|+++++.|+.+..++.++..++|.. ..
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 174 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM 174 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCC
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceecc
Confidence 9999999976654 33 36788888988888888888888743 24
Q ss_pred cCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.||+.|+|||++.. +..++.++|||||||++|||+||+.||..... .................+..+++.+
T Consensus 175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--~~~~~~~~~~~~~~~~~p~~~s~~~----- 247 (384)
T 4fr4_A 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHTFETTVVTYPSAWSQEM----- 247 (384)
T ss_dssp CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--SCHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhhcccCCCCcCCHHH-----
Confidence 68999999998653 34589999999999999999999999975332 2344444444444444444454444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCC-hHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPR-MRTVS 575 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~ 575 (584)
.+++.+||+.||.+||+ +.++.
T Consensus 248 --------~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 248 --------VSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp --------HHHHHHHSCSSGGGSCCSHHHHH
T ss_pred --------HHHHHHHhcCCHhHhcccHHHHH
Confidence 44667799999999998 66654
No 64
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=3.5e-30 Score=257.90 Aligned_cols=220 Identities=20% Similarity=0.293 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+..++ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQG------RIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp EEEEEECSSCEEEEEEETTS------CEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred hhhccCCCCeEEEEEEECCC------CEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36799999999999998765 799999997652 22234678999999999999999999999999999999999
Q ss_pred cccCCcHHHH--------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAA--------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~--------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++ +|.++ ||+.| |++++++|+.+..++.++..|+|...
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 9985 66444 44444 67888888888888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccC-------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVID------- 537 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d------- 537 (584)
..||+.|+|||++.....++.++||||+||++|||+||+.||.+..... .+..+.. ......+ .....+
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFS-ILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHH-HHCCCCTTTSGGGTTSHHHHSC
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HHCCCChHHhhhhhccchhhhc
Confidence 3578999999986554678999999999999999999999998644322 2222222 1111110 000000
Q ss_pred ------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....... ......++.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSI-IPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHH-STTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHh-CcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0011235678999999999999999999986
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=263.95 Aligned_cols=206 Identities=17% Similarity=0.208 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +|||||++++++.+.+..|+|
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~-----~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETG-----DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCEEEEEEEEcCCC-----CEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 468999999999999988765 899999997641 223346788999999998 799999999999999999999
Q ss_pred eecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++ |+. -|++++++|+.+..++.++..|+|...
T Consensus 103 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 182 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA 182 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcccc
Confidence 9999999996655 333 468888899988888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
.+||+.|+|||++.. ..++.++||||+||++|||++|+.||.+. ...............++..+++.+.
T Consensus 183 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~~---- 252 (353)
T 3txo_A 183 TFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEVVYPTWLHEDAT---- 252 (353)
T ss_dssp ---CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHHH----
T ss_pred ccCCCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHHH----
Confidence 368999999999554 67999999999999999999999999742 3344555555555545555555443
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh------HHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM------RTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~------~ev~~ 576 (584)
+++.+||+.||++||++ .|+++
T Consensus 253 ---------~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 253 ---------GILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---------HHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---------HHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 46666999999999998 66653
No 66
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=3.5e-30 Score=262.37 Aligned_cols=210 Identities=19% Similarity=0.282 Sum_probs=157.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
..+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+++..+
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETG-----QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3568999999999999987765 899999986431 1123478999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHH-----------------------------hcc--cccccCCCCccccccCe---EEecCCCcc--
Q 007935 422 LISDFIRNGSLYAAL-----------------------------HGF--GLNRLLPGTSKVTKNET---IVTSGTGSR-- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-----------------------------~~~--g~~~~~~~~~~i~~~~~---~~~~~~~~~-- 465 (584)
+||||+++|+|.+++ |+. .|++++++|+.+..++. ++..++|..
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999996554 333 36778888887765433 667776632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+. -...............
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~i~~~~~~~~--- 252 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGT------KERLFEGIIKGKYKMN--- 252 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSS------HHHHHHHHHHTCCCCC---
T ss_pred ecCCCeeecCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHcCCCCCC---
Confidence 2368999999999554 67999999999999999999999999752 1223333333222211
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.....+ ...+.+++.+||+.||++|||+.|+++
T Consensus 253 -~~~~~~~-----s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 -PRQWSHI-----SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -HHHHTTS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -ccccccC-----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111 124566888899999999999999985
No 67
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=6.7e-30 Score=249.99 Aligned_cols=210 Identities=22% Similarity=0.360 Sum_probs=164.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||+|++...... .+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~------~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNK------DKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred eeEecCCCceeEEEEEecCC------CeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 46799999999999998765 78999999875433 27899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|.++.+.|+.+..+..++..+++...
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 999999877642 2 356777788877777778888876432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEI 544 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~ 544 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||... .............. ..+...++
T Consensus 165 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~------ 232 (267)
T 3t9t_A 165 TKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTGFRLYKPRLAST------ 232 (267)
T ss_dssp TTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTTCCCCCCTTSCH------
T ss_pred ccccccccChhhhcC-CCccchhchhhhHHHHHHHhccCCCCCCCC-----CHHHHHHHHhcCCcCCCCccCcH------
Confidence 245678999999654 678999999999999999999 89998742 22333333332211 11222222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 -------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 233 -------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 34557788999999999999999999999865
No 68
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=4.2e-30 Score=256.82 Aligned_cols=215 Identities=24% Similarity=0.338 Sum_probs=161.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+... .||||.++... .....+.|.+|++++++++|||||++++++ ..+..++||
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~~--------~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 110 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWHG--------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVT 110 (307)
T ss_dssp EEEEEEECSSCEEEEEESSS--------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred EEeEecCCCCeEEEEEEECC--------EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-ccCcEEEEE
Confidence 45789999999999998643 48888887642 333457899999999999999999999986 456789999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++ +. -|+++++.|+.+..+..++..|||...
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 9999999977764 22 468888899888888888888887432
Q ss_pred ---ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCCccccChh
Q 007935 467 ---SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSEVIDPA 539 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~d~~ 539 (584)
..||+.|+|||++. .+..++.++|||||||++|||+||+.||...... ........... ..+.. +.+.
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~ 265 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFMVGRGYASPDLSK-LYKN 265 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHHHHHTCCCCCSTT-SCSS
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH----HHHHHHHhcCCCCcchhh-hhcC
Confidence 36899999999854 2456889999999999999999999999753321 11211111111 11111 1111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ...+.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 266 ~---------~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 266 C---------PKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp S---------CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred C---------cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 1 1245567888999999999999999999998864
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=3.3e-30 Score=264.42 Aligned_cols=209 Identities=14% Similarity=0.180 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.++||+|+||.||+|....++ +.||||+++.... ...+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATG-----LKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEECC-----CEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEecCcCEEEEEEEEcCCC-----cEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 467999999999999987765 8999999987432 3347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccc--ccCeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT--KNETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~--~~~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++. .. -|+++++.|+.+. .+..++..|+|...
T Consensus 168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 99999976653 22 3677888887763 34567777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ...............+.....+.+
T Consensus 248 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------ 315 (373)
T 2x4f_A 248 NFGTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-----NDAETLNNILACRWDLEDEEFQDI------ 315 (373)
T ss_dssp CCSSCTTCCHHHHT-TCBCCHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCSCSGGGTTS------
T ss_pred ccCCCcEeChhhcc-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhccCCCChhhhccC------
Confidence 35899999999854 468899999999999999999999999752 222333333333322211100111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||.+|||+.|+++
T Consensus 316 ---~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 ---SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 124566888899999999999999986
No 70
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=3e-30 Score=261.16 Aligned_cols=220 Identities=21% Similarity=0.271 Sum_probs=169.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|.....+.....+.||||.++........+.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 457899999999999998776655555789999998765545557899999999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHhc---------------------------------------c--cccccCCCCccccccCeEEecCCC
Q 007935 425 DFIRNGSLYAALHG---------------------------------------F--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
||+++|+|.++++. . .|+++++.|+.+..+..++..|+|
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 209 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCG
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccc
Confidence 99999999877642 2 367788888888777888888876
Q ss_pred ccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 464 SRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 464 ~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... ............
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~-- 285 (333)
T 2i1m_A 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKDGYQ-- 285 (333)
T ss_dssp GGCCGGGCTTSEECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHHHHTCC--
T ss_pred cccccccccceeecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHHhcCCC--
Confidence 432 235668999998654 679999999999999999999 99999753322 112222222111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
...+...++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 286 ~~~~~~~~~-------------~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 286 MAQPAFAPK-------------NIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp CCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCH-------------HHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111222222 3455778899999999999999999999874
No 71
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=4.4e-30 Score=270.56 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=163.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+..+ ..||||+++..... .++|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTT------EEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCC------ceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 356899999999999998775 78999999865332 3789999999999999999999999866 77899999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|+|...
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 9999999877752 2467888888888777788888887542
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 339 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 408 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYRMPCPPECPE---- 408 (452)
T ss_dssp ----CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTSCH----
T ss_pred cCCcccccccCHhHHhc-CCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999998655 589999999999999999999 999997532 223333322221 112222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.++++.|+++.
T Consensus 409 ---------~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 409 ---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---------HHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 3456888899999999999999999999874
No 72
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=264.95 Aligned_cols=208 Identities=19% Similarity=0.244 Sum_probs=149.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++.... .+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQ-----KPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCC-----cEEEEEEeccchh---HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467999999999999998765 7999999986432 26788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccccc---cCeEEecCCCcc----------c
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTK---NETIVTSGTGSR----------I 466 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~----------~ 466 (584)
+++|+|.+++. +. .|+++++.|+.+.. +..++..|+|.. .
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99999976664 22 35777888877754 566777777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||..... ....................+.+
T Consensus 210 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~i~~~~~~~~~~~~~~~------ 278 (349)
T 2w4o_A 210 VCGTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERG----DQFMFRRILNCEYYFISPWWDEV------ 278 (349)
T ss_dssp ---CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC----HHHHHHHHHTTCCCCCTTTTTTS------
T ss_pred ccCCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCcc----cHHHHHHHHhCCCccCCchhhhC------
Confidence 36899999999955 46899999999999999999999999975322 12223333332221111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 279 ---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 279 ---SLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 124456888899999999999999986
No 73
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=6.1e-30 Score=263.76 Aligned_cols=218 Identities=23% Similarity=0.314 Sum_probs=168.7
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+....+ .......||||+++........+++.+|+++++++ +|||||+++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 3568999999999999975432 12233689999998765555567899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.+++.. . .|+++++.|+.+..+..++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL 232 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 232 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEE
Confidence 9999999999888743 1 35778888888877788888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.|||... ..+|..|+|||++. +..++.++|||||||++|||+| |+.||... ...++....
T Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt~g~~p~~~~-----~~~~~~~~~ 306 (382)
T 3tt0_A 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLL 306 (382)
T ss_dssp CSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHH
T ss_pred cccCcccccccccccccccCCCCCcceeCHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH
Confidence 8887432 24567899999955 4689999999999999999999 99999742 233333333
Q ss_pred hhcCC-CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... ..+..+++ .+.+++.+||+.||++|||+.||++.|+++.
T Consensus 307 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 307 KEGHRMDKPSNCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HTTCCCCCCSSCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCccCCH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 32221 12222333 3455778899999999999999999999874
No 74
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=8.7e-30 Score=258.43 Aligned_cols=206 Identities=14% Similarity=0.218 Sum_probs=159.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+.+|+.++.++ +|||||++++++.+.+..++|
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTD-----RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999998652 233346788999999998 899999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||+++|+|.+++. .. -|++++++|+.+..++.++..++|...
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~ 168 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence 99999999976653 33 367888888888888888888876432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----CCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----GKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||...... .................++..+++.+
T Consensus 169 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~- 246 (345)
T 3a8x_A 169 TFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA- 246 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHH-
T ss_pred ccCCCccccCccccC-CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHH-
Confidence 36899999999955 468999999999999999999999999753221 11222233333344444444444444
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+++.+||+.||++||++
T Consensus 247 ------------~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 247 ------------ASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ------------HHHHHHHTCSSTTTSTTC
T ss_pred ------------HHHHHHHhcCCHhHCCCC
Confidence 446667999999999996
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=6.2e-31 Score=265.46 Aligned_cols=206 Identities=19% Similarity=0.221 Sum_probs=157.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQ-----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999987765 899999997541 1222367999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+ +|+|.+++. +. .|++++++|+.+..+..++..|||.. ..
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~ 167 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS 167 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCC
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccc
Confidence 999 788876653 32 46888999998888888888888743 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++......+.++|||||||++|||++|+.||.+...... ..........+++.+++.
T Consensus 168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i~~~~~~~p~~~s~~-------- 234 (336)
T 3h4j_B 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKVNSCVYVMPDFLSPG-------- 234 (336)
T ss_dssp TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCCCSSCCCCCTTSCHH--------
T ss_pred cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHHHcCCCCCcccCCHH--------
Confidence 6899999999965433347899999999999999999999975332210 000111111223333333
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||.+|||+.|+++
T Consensus 235 -----~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 235 -----AQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -----HHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHcCCChhHCcCHHHHHh
Confidence 345778899999999999999974
No 76
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=4.8e-30 Score=260.76 Aligned_cols=206 Identities=15% Similarity=0.216 Sum_probs=164.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||+++... .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESG-----NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEeecCcCcEEEEEEECCCC-----CEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 468999999999999988765 899999997542 2233477899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc--------cccC
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------ISAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------~~~g 469 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..++|.. ...|
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~g 200 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 200 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccC
Confidence 9999999976664 22 36888888988888888888888743 2468
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 549 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 549 (584)
|+.|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 201 t~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~--------- 265 (350)
T 1rdq_E 201 TPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVRFPSHFSSDL--------- 265 (350)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTCCHHH---------
T ss_pred CccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCC-----CHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 999999999554 68999999999999999999999999742 234444555554444455555544
Q ss_pred HHHHHHHHhcccCCCCCCCCC-----hHHHHH
Q 007935 550 VLATFHIALNCTELDPEFRPR-----MRTVSE 576 (584)
Q Consensus 550 ~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 576 (584)
.+++.+||+.||.+||+ +.||.+
T Consensus 266 ----~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 ----KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 34666799999999998 787764
No 77
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=8.4e-30 Score=253.62 Aligned_cols=207 Identities=17% Similarity=0.236 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------------------------hhhHhHHHHHHHHHh
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------------------------WRFKDFESEVEAIAR 401 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------~~~~~f~~Ei~~l~~ 401 (584)
.+.||+|+||.||+|+...++ +.||||++...... ...+.|.+|++++++
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDN-----TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTT-----EEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred EeEEeecCCEEEEEEEECCCC-----cEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 467999999999999987765 89999999764211 123678999999999
Q ss_pred cCCCceeeeeEEEEe--CCceeEeeecccCCcHH------------------------HHHhccc--ccccCCCCccccc
Q 007935 402 VQHPNIVRLKAFYYA--NDEKLLISDFIRNGSLY------------------------AALHGFG--LNRLLPGTSKVTK 453 (584)
Q Consensus 402 l~HpnIV~l~g~~~~--~~~~~lV~Ey~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i~~ 453 (584)
++|||||++++++.+ .+..++||||+++|+|. .|||..| |+++++.|+.+..
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence 999999999999987 56789999999999872 5566655 6788888888887
Q ss_pred cCeEEecCCCcc-----------cccCCCcccCccccccCCC--CCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 007935 454 NETIVTSGTGSR-----------ISAISNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 520 (584)
Q Consensus 454 ~~~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~--~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~ 520 (584)
++.++..|+|.. ...||+.|+|||++..... ++.++|||||||++|||++|+.||... ....
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~ 247 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-----RIMC 247 (298)
T ss_dssp TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHH
T ss_pred CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-----cHHH
Confidence 888888887643 2368999999998654322 478899999999999999999999742 2233
Q ss_pred HHHHHhhcCCCCc--cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 521 LVRKAFRERRPLS--EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 521 ~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+...........+ ..+++ .+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~-------------~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQALEFPDQPDIAE-------------DLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCCCCCSSSCCCH-------------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccCCCCCccccCH-------------HHHHHHHHHhhcChhhCCCHHHHhc
Confidence 3333332222211 12222 3455778899999999999999874
No 78
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=7.9e-30 Score=257.06 Aligned_cols=216 Identities=20% Similarity=0.323 Sum_probs=164.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+.. ....||+|.+.........+.+.+|+.++++++|||||+++++|. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~-~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGES-IKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCS-CCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCce-EEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 46799999999999998765422 225699999876544444577899999999999999999999885 5679999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..++.++..+||...
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 175 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC--
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccccccc
Confidence 999999776642 2 468888999988888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..||..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... .+...+... .....+..+++.+.
T Consensus 176 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~--- 247 (325)
T 3kex_A 176 EAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKG--ERLAQPQICTIDVY--- 247 (325)
T ss_dssp ---CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTT--CBCCCCTTBCTTTT---
T ss_pred CCCCcccccChHHhcc-CCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcC--CCCCCCCcCcHHHH---
Confidence 246678999999654 679999999999999999999 99999853322 222222211 12222334444443
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+++.+||+.||++|||+.|+++.|+++.
T Consensus 248 ----------~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 248 ----------MVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----------HHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----------HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 4667799999999999999999999875
No 79
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=8.6e-30 Score=277.66 Aligned_cols=212 Identities=20% Similarity=0.280 Sum_probs=163.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeecc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
..||+|+||.||+|.+...+ ....||||+++........++|.+|+++|++++|||||+++++|.+ +..++|||||
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~ 417 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMA 417 (613)
T ss_dssp EEEEECSSSEEEEEEEECSS---CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred cEEecCCCcEEEEEEEecCC---CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeC
Confidence 36999999999999876421 1168999999876444456889999999999999999999999976 6799999999
Q ss_pred cCCcHHHHHhc----------------------------ccccccCCCCccccccCeEEecCCCcccc------------
Q 007935 428 RNGSLYAALHG----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRIS------------ 467 (584)
Q Consensus 428 ~~GsL~~~L~~----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~~------------ 467 (584)
++|+|.++|+. ..|+++++.|+.+..+..++..|||....
T Consensus 418 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99999877742 24678888898888888888888875421
Q ss_pred --cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 468 --AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 468 --~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
.+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+... .+......... ...+..+++
T Consensus 498 ~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~----- 566 (613)
T 2ozo_A 498 AGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPP----- 566 (613)
T ss_dssp ----CCTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCTTCCH-----
T ss_pred CCCCccceeCHhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCH-----
Confidence 24578999999654 689999999999999999998 9999975332 22222222221 112222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.+|++.|+.+.
T Consensus 567 --------~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 567 --------ELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp --------HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999863
No 80
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=4.9e-30 Score=254.90 Aligned_cols=221 Identities=24% Similarity=0.331 Sum_probs=161.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||+|++.... ....+.||||++... .....+.|.+|++++++++|||||++++++... ...++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTC-SSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hheeeccCCEEEEEEEEeccc-CCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 467999999999999853211 111289999999864 333457899999999999999999999999654 5689999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..|+|...
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172 (295)
T ss_dssp ECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC----------
T ss_pred EeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee
Confidence 99999999777642 2 367888888888888888888877432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCC----------CCCcHHHHHHHHhhc--CC
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DGKGLESLVRKAFRE--RR 530 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~----------~~~~l~~~~~~~~~~--~~ 530 (584)
..++..|+|||++.. ..++.++|||||||++|||+||..|+..... ............... ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (295)
T 3ugc_A 173 VKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251 (295)
T ss_dssp ---CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCC
T ss_pred eccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcC
Confidence 235667999999654 6899999999999999999999999864210 000001011111111 11
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+..++ ..+.+++.+||+.||++|||+.|++++|+++++
T Consensus 252 ~~~~~~~-------------~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 252 PRPDGCP-------------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp CCCTTCC-------------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCcC-------------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1122222 245668888999999999999999999999875
No 81
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=6.2e-30 Score=260.04 Aligned_cols=221 Identities=23% Similarity=0.288 Sum_probs=165.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+............||||.++........+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 467899999999999997543333334789999998654444558899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc------------------------------------------------c--cccccCCCCcccccc
Q 007935 425 DFIRNGSLYAALHG------------------------------------------------F--GLNRLLPGTSKVTKN 454 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------------------------------~--g~~~~~~~~~~i~~~ 454 (584)
||+++|+|.+++.. . .|+++++.|+.+..+
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~ 208 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG 208 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC
Confidence 99999999877642 1 357788888888777
Q ss_pred CeEEecCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHH
Q 007935 455 ETIVTSGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 520 (584)
Q Consensus 455 ~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~ 520 (584)
..++..++|... ..||+.|+|||++.. ..++.++|||||||++|||+| |+.||.+..... ....
T Consensus 209 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~ 286 (344)
T 1rjb_A 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-NFYK 286 (344)
T ss_dssp TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH
T ss_pred CcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-HHHH
Confidence 888888876432 245678999998655 679999999999999999998 999997643321 1222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.... ....+..+++ .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 287 ~~~~~~--~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 287 LIQNGF--KMDQPFYATE-------------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHTTC--CCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHhcCC--CCCCCCCCCH-------------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 221111 1111222222 34557788999999999999999999998753
No 82
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=6.9e-30 Score=261.05 Aligned_cols=208 Identities=21% Similarity=0.358 Sum_probs=154.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++...++ +.||||++...... .+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTK-----ELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTC-----CEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCC-----cEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999998765 89999999865332 26789999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe--EEecCCCcc----------cc
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET--IVTSGTGSR----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~--~~~~~~~~~----------~~ 467 (584)
+++|+|.+++ |+.| |+++++.|+.+..+.. ++..++|.. ..
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 9999997655 3333 6777888877765543 777777643 24
Q ss_pred cCCCcccCccccccCCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc--ccChhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQK-CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE--VIDPALVKEI 544 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~k-sDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~d~~~~~~~ 544 (584)
.||+.|+|||++.. ..++.+ +|||||||++|||++|+.||.+.... ................++. .+++
T Consensus 178 ~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~------ 249 (361)
T 3uc3_A 178 VGTPAYIAPEVLLR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSIPDDIRISP------ 249 (361)
T ss_dssp ---CTTSCHHHHHC-SSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCCCCTTSCCCH------
T ss_pred cCCCCcCChhhhcC-CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCCCCCcCCCCH------
Confidence 68999999999655 455544 99999999999999999999864332 2344444444443332222 2233
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 250 -------~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 250 -------ECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -------HHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -------HHHHHHHHHccCChhHCcCHHHHHh
Confidence 3345777899999999999999985
No 83
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=3.1e-30 Score=261.30 Aligned_cols=205 Identities=18% Similarity=0.274 Sum_probs=162.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++.++ +|||||++++++.+.+..++|
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997641 123346788999999987 999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. .|++++++|+.+..++.++..++|..
T Consensus 97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 176 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176 (345)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence 99999999976654 33 46788888888888888888887643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ...............++..+++.+
T Consensus 177 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~----- 245 (345)
T 1xjd_A 177 TFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-----DEEELFHSIRMDNPFYPRWLEKEA----- 245 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred CCCCCcccCChhhhc-CCCCCChhhhHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCCCCCcccCHHH-----
Confidence 236899999999955 468999999999999999999999999742 234444444444444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChH-HHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMR-TVS 575 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 575 (584)
.+++.+||+.||++||++. |+.
T Consensus 246 --------~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 246 --------KDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --------HHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --------HHHHHHHhcCCHhHcCCChHHHH
Confidence 4466779999999999997 654
No 84
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-29 Score=256.90 Aligned_cols=216 Identities=25% Similarity=0.357 Sum_probs=163.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....++ .....||||.++........+.|.+|++++++++|||||++++++.+.+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCC-CccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 4789999999999999865421 122579999998765444557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 207 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccccccc
Confidence 999999777642 2 367778888888777778888876432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++. +..++.++|||||||++|||+| |+.||.... ............ .+....+++
T Consensus 208 ~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~---- 277 (333)
T 1mqb_A 208 SGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAINDGFRLPTPMDCPS---- 277 (333)
T ss_dssp ---CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCCCCCCTTCBH----
T ss_pred CCCCccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHCCCcCCCcccCCH----
Confidence 13466899999954 4689999999999999999999 999997422 223333332221 111112222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++||++.|+++.|+++.
T Consensus 278 ---------~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 278 ---------AIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp ---------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3456888899999999999999999999874
No 85
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=8.4e-30 Score=255.37 Aligned_cols=220 Identities=21% Similarity=0.285 Sum_probs=166.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+.||+|+||.||+|+..........+.||||+++........+.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 457899999999999986442222333899999998765444557899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 425 DFIRNGSLYAALHG-------------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl 186 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEE
Confidence 99999999887642 1 35677778887777777888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||....... .........
T Consensus 187 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~ 264 (313)
T 1t46_A 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKMIKEG 264 (313)
T ss_dssp CCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHHHHHHHT
T ss_pred ccccccccccccccceeccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHHHHhccC
Confidence 7776432 235667999998655 689999999999999999999 999997643221 122222211
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ......+++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 265 ~~--~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 265 FR--MLSPEHAPA-------------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp CC--CCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC--CCCcccCCH-------------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11 111222222 3455778899999999999999999999874
No 86
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.2e-31 Score=264.41 Aligned_cols=221 Identities=21% Similarity=0.276 Sum_probs=153.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeCC----ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAND----EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~~----~~ 420 (584)
.+.||+|+||.||+|+.. + +.||||+++... .+.+.+|.+++.. ++||||+++++++.+.+ ..
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-G------EEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-T------SCEEEEECC-TT----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred hhhccCCCCeEEEEEEEc-C------cceEEEEecccc----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 467999999999999875 2 689999987532 2678889998888 79999999999998876 78
Q ss_pred eEeeecccCCcHHHHHhc--------------------------------c--cccccCCCCccccccCeEEecCCCccc
Q 007935 421 LLISDFIRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
++||||+++|+|.++++. . -|++++++|+.+..+..++..|||...
T Consensus 77 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 999999999999877642 1 256666777777777777777776431
Q ss_pred ---------------ccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCCC
Q 007935 467 ---------------SAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTG----------RLPDAGPENDGK 516 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~~ 516 (584)
..||+.|+|||++.... .++.++|||||||++|||+|| +.||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 26899999999865422 334689999999999999999 677765433222
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
....+........ ......... ........+.+++.+||+.||++|||+.||+++|+++..+
T Consensus 237 ~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 237 SVEEMRKVVCEQK--LRPNIPNRW----QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCC-CHHHHTTSC--CCCCCCGGG----GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred cHHHHHHHHHHhh--cCCCccccc----cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 2222222222111 111111111 1224456788899999999999999999999999998754
No 87
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.5e-30 Score=265.23 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=161.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
..+.||+|+||.||+|+.....+ ....||||.++........++|.+|+.++++++|||||+++++|.+ ++..++||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTT--EEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred cCcEeeeCCCeEEEEEEEECCCC--cEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 35789999999999999764321 1257999999875555556889999999999999999999999765 45789999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..|||...
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 99999999877642 2 367888888888777788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~ 539 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |.+||...... ...... ..... ..+..+++
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~---~~~~~~~~p~~~~~- 323 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---LQGRRLLQPEYCPD- 323 (373)
T ss_dssp -------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH---HTTCCCCCCTTCCH-
T ss_pred cccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH---HcCCCCCCCCCCCH-
Confidence 245678999999654 689999999999999999999 67777653322 222222 12211 11222222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 324 ------------~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 324 ------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3456788899999999999999999999875
No 88
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=4.2e-30 Score=270.73 Aligned_cols=207 Identities=18% Similarity=0.254 Sum_probs=163.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTG-----HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTC-----CEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 467999999999999988665 899999997542 2223467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc----------cc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------IS 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~~ 467 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..|+|.. ..
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 175 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 175 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccccc
Confidence 9999999976653 33 36788888888887888888887643 24
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++.....++.++||||+||++|||++|+.||.+. ................+..+++.+
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~------- 243 (476)
T 2y94_A 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-----HVPTLFKKICDGIFYTPQYLNPSV------- 243 (476)
T ss_dssp CSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SSHHHHHHHHTTCCCCCTTCCHHH-------
T ss_pred CCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHhcCCcCCCccCCHHH-------
Confidence 68999999999655333478999999999999999999999742 233444444444433344444444
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 244 ------~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 244 ------ISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------HHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHcCCCchhCcCHHHHHh
Confidence 44677799999999999999985
No 89
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.7e-29 Score=255.90 Aligned_cols=220 Identities=23% Similarity=0.273 Sum_probs=162.2
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc--CCCceeeeeEEEEeC----Cc
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV--QHPNIVRLKAFYYAN----DE 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l--~HpnIV~l~g~~~~~----~~ 419 (584)
..+.||+|+||.||+|+.. + +.||||++..... ..+.+|.+++... +|||||++++++.+. +.
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-G------EKVAVKVFFTTEE----ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-T------EEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred EEeEeecCCCeEEEEEEEC-C------ceEEEEEEecccc----chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 3578999999999999886 3 7999999965321 4556677766655 999999999999987 67
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc----------cccccCCCCccccccCeEEecCCCcc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF----------GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~----------g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.++||||+++|+|.+++ |.. -|+++++.|+.+..+..++..|||..
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 89999999999996554 432 46778888888877788888888743
Q ss_pred ---------------cccCCCcccCccccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCCCCCCCC
Q 007935 466 ---------------ISAISNVYLAPEARIYGSKFTQK------CDVYSFGIVLLEILTG----------RLPDAGPEND 514 (584)
Q Consensus 466 ---------------~~~gt~~y~aPE~~~~~~~~~~k------sDV~SfGvvl~ElltG----------~~p~~~~~~~ 514 (584)
...||..|+|||++.. ..++.+ +|||||||++|||+|| +.||......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDE-SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTT-CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeeccccccccCCCCCCccCcceeChhhccc-ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 2368999999998554 444444 9999999999999999 6777654443
Q ss_pred CCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 515 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 515 ~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
......+........ ......... ........+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 269 ~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 269 DPSYEDMREIVCIKK--LRPSFPNRW----SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SCCHHHHHHHHTTSC--CCCCCCGGG----GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCchhhhHHHHhhhc--cCccccccc----hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 333333333222211 111122111 122455678889999999999999999999999999864
No 90
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=6.5e-30 Score=255.94 Aligned_cols=215 Identities=20% Similarity=0.274 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||+++.. ......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDG-----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp EEEEECC--CEEEEEEETTTC-----CEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEeecCCCCceEEEEEEcCCC-----ceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 468999999999999987655 89999999753 23334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++.. . -|.++.+.|+.+..++.++..+++..
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 99999999777642 2 35677777877777777777777642
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~ 540 (584)
...||..|+|||++.. ..++.++||||||+++|||++|+.||.+... ....+.........+ . ...+++
T Consensus 192 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-- 265 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPLPSDHYSE-- 265 (310)
T ss_dssp -------CCSSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCSCCCCTTTSCH--
T ss_pred cccccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccCCCCcccccCH--
Confidence 2357889999998554 6789999999999999999999999975322 233333333222211 1 112222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.||++.|+++++
T Consensus 266 -----------~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 266 -----------ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 34567888999999999999999999999865
No 91
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=1.3e-29 Score=250.01 Aligned_cols=215 Identities=24% Similarity=0.359 Sum_probs=163.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...... ....||||.+.........+.|.+|+.++++++||||+++++++.+ +..++||||
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 93 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKG--EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMEL 93 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTC--CEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred EEEEEecCCeeEEEeEEcCCCC--CcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEec
Confidence 4689999999999998765421 2267999999876444456889999999999999999999999754 567999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++ .. -|+++.+.|+.+..++.++..+++...
T Consensus 94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 173 (281)
T 3cc6_A 94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173 (281)
T ss_dssp CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------C
T ss_pred CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccccccccc
Confidence 99999976664 22 367788888888878888888877432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+|..|+|||++.. ..++.++||||||+++|||+| |+.||..... ......+... ...+.+..+++.
T Consensus 174 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~------ 242 (281)
T 3cc6_A 174 TRLPIKWMSPESINF-RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG--DRLPKPDLCPPV------ 242 (281)
T ss_dssp CCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHT--CCCCCCTTCCHH------
T ss_pred CCCCcceeCchhhcc-CCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcC--CCCCCCCCCCHH------
Confidence 245678999998544 688999999999999999999 9999975322 2222222221 122223333333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 243 -------l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 243 -------LYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 445777799999999999999999999874
No 92
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=1.3e-29 Score=257.66 Aligned_cols=212 Identities=18% Similarity=0.296 Sum_probs=159.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|.....+ ..||+|++.... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTR-----AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cceeeecCCeEEEEEEECCCC-----ceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 578999999999999987765 799999986531 23345789999999999999999999999999999999
Q ss_pred eeecccCCcHHHHHh-----------------------------------------------------------------
Q 007935 423 ISDFIRNGSLYAALH----------------------------------------------------------------- 437 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~----------------------------------------------------------------- 437 (584)
||||+++|+|.+++.
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999977663
Q ss_pred cc--cccccCCCCccccccC--eEEecCCCcc---------------cccCCCcccCcccccc-CCCCCCccchhhHHHH
Q 007935 438 GF--GLNRLLPGTSKVTKNE--TIVTSGTGSR---------------ISAISNVYLAPEARIY-GSKFTQKCDVYSFGIV 497 (584)
Q Consensus 438 ~~--g~~~~~~~~~~i~~~~--~~~~~~~~~~---------------~~~gt~~y~aPE~~~~-~~~~~~ksDV~SfGvv 497 (584)
+. -|+++++.|+.+..++ .++..|+|.. ...||+.|+|||++.. +..++.++|||||||+
T Consensus 186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 22 3577777887776554 6777777633 2358999999998643 2578999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc----ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHH
Q 007935 498 LLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE----VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 498 l~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
+|||++|+.||.+.. ................. .+++ .+.+++.+||+.||++|||+.|
T Consensus 266 l~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 266 LHLLLMGAVPFPGVN-----DADTISQVLNKKLCFENPNYNVLSP-------------LARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCTTSGGGGGSCH-------------HHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHCCCCCCCCC-----hHHHHHHHHhcccccCCcccccCCH-------------HHHHHHHHHcCCChhHCCCHHH
Confidence 999999999997422 22333333333222111 1222 3456778899999999999999
Q ss_pred HHH--HHHhh
Q 007935 574 VSE--SLDRV 581 (584)
Q Consensus 574 v~~--~L~~i 581 (584)
+++ .++++
T Consensus 328 ~l~hp~~~~~ 337 (345)
T 3hko_A 328 ALQHPWISQF 337 (345)
T ss_dssp HHHSHHHHTT
T ss_pred HhcChhhccC
Confidence 986 34444
No 93
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=3.7e-30 Score=259.26 Aligned_cols=211 Identities=19% Similarity=0.312 Sum_probs=144.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~E 425 (584)
++.||+|+||.||+|....++ +.||||++... ..+.+.+|+.++.+++ |||||++++++.+++..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 86 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSN-----QAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTC-----CEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCccccCCCeEEEEEEECCCC-----CEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEE
Confidence 467999999999999998765 89999999753 2267889999999996 9999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccC---eEEecCCCccc---------
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE---TIVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~---~~~~~~~~~~~--------- 466 (584)
|+++|+|.++++ +. -|+++++.|+.+..++ .++..|+|...
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 87 LLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp CCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999999976654 33 3677888887776544 56777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC--CCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND--GKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..||+.|+|||++. +..++.++|||||||++|||++|+.||...... .....+...........+.. ....
T Consensus 167 ~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~ 241 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLN-QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG----EAWK 241 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS----HHHH
T ss_pred cccCCCcCccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc----cccc
Confidence 35789999999954 468999999999999999999999999864332 12334444444333322111 1111
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~-----~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 242 N-----VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp T-----SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred C-----CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1 1124566888899999999999999863
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=7.6e-30 Score=256.24 Aligned_cols=222 Identities=16% Similarity=0.213 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||+++........+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTG-----VYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp ---------CEEEEEECSSSC-----CEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred eeEECCCCCEEEEEEEECCCC-----cEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 356999999999999987765 899999998654444447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 427 IRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++ |+|.+++. +. .|++++++|+.+..++.++..++|...
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 98 58866553 22 357788888888777888888877432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc------c
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSE------V 535 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~------~ 535 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... .....+....... ..... .
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 367899999998655456899999999999999999999999753211 1111111111100 00000 0
Q ss_pred cC--------hhhhhhhh---HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 ID--------PALVKEIH---AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d--------~~~~~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+. ..+..... .......+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 00000000 0011235678999999999999999999975
No 95
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.96 E-value=9.6e-30 Score=250.12 Aligned_cols=205 Identities=18% Similarity=0.233 Sum_probs=145.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||+|+...++ +.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTG-----QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp C---------EEEEECTTTC-----CEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEcCCCEEEEEEEECCCC-----CEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 56999999999999987665 899999997652 22334689999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc----------cc
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------SA 468 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------~~ 468 (584)
|+ +|+|.+++ |..| |+++.+.|+.+..+..++..+++... ..
T Consensus 94 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 172 (275)
T 2eue_A 94 YA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172 (275)
T ss_dssp CC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------------
T ss_pred hc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcccccCCC
Confidence 99 66775544 4333 67788888888777778888876432 35
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|+|||++......+.++|||||||++|||+||+.||.. ................++..+++.+
T Consensus 173 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------- 239 (275)
T 2eue_A 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGA-------- 239 (275)
T ss_dssp --CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCCCCTTSCHHH--------
T ss_pred CCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCCCCccCCHHH--------
Confidence 889999999965533347899999999999999999999974 2334444444444444455555544
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 240 -----~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 240 -----AGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHhhcCHhHCCCHHHHhh
Confidence 34677799999999999999974
No 96
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=2.1e-29 Score=254.00 Aligned_cols=209 Identities=19% Similarity=0.262 Sum_probs=155.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+++...+. ...+.||+|+++... .....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 99 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGA--NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLI 99 (327)
T ss_dssp EEEEEEETTEEEEEEEECSST--TTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccC--CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEE
Confidence 468999999999999985211 111799999998652 122346688999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. -|+++++.|+.+..++.++..++|..
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (327)
T 3a62_A 100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179 (327)
T ss_dssp EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------C
T ss_pred EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCcccc
Confidence 99999999976653 33 46888899988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 180 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~----- 248 (327)
T 3a62_A 180 TFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGE-----NRKKTIDKILKCKLNLPPYLTQEA----- 248 (327)
T ss_dssp TTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCTTSCHHH-----
T ss_pred ccCCCcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 2368999999999554 67899999999999999999999999742 233444444444444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| ++.|+++
T Consensus 249 --------~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 249 --------RDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --------HHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --------HHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 4466779999999999 6677764
No 97
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=8.4e-30 Score=263.58 Aligned_cols=161 Identities=22% Similarity=0.276 Sum_probs=134.1
Q ss_pred ceeceee--cCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G--~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+| +||.||+|+....+ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTG-----EYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred EecccCCcCCceEEEEEEEcCCC-----CEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 4679999 99999999998765 899999997652 233457788999999999999999999999999999999
Q ss_pred eecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc---------
Q 007935 424 SDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR--------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------- 465 (584)
||||++|+|.+++. +. .|++++++|+.+..++.++..+++..
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 99999999976653 22 36888888888877777777777532
Q ss_pred ---------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 466 ---------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
...||..|+|||++..+ ..++.++|||||||++|||++|+.||.+..
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 13688889999996542 478999999999999999999999997643
No 98
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=8.7e-30 Score=252.73 Aligned_cols=221 Identities=16% Similarity=0.208 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...++ +.||||+++... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEecCCCCeEEEEEEECCCC-----ceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 467999999999999998765 899999997653 23334778999999999999999999999999999999999
Q ss_pred cccCCcH-------------------------HHHHhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSL-------------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL-------------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|++++.+ .+|||+.| |++++++|+.+..++.++..|+|... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 9986432 23445444 67888888888888888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh-----
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK----- 542 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~----- 542 (584)
.||..|+|||++.....++.++|||||||++|||+||..||.... .....................+....
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 578899999996654458999999999999999999988865322 22222222211100000000000000
Q ss_pred ----------hh-hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 ----------EI-HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ----------~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00011234567888999999999999999985
No 99
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=254.49 Aligned_cols=217 Identities=21% Similarity=0.323 Sum_probs=165.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+... ...||+|.+.........+.|.+|+.++++++|||||+++++|.+. ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~-~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSC-CEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceE-EEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEe
Confidence 468999999999999987664322 2568999987665555568899999999999999999999999875 48899999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.++++. . -|+++++.|+.+..++.++..|||...
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~ 177 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccccc
Confidence 999999776642 2 467888888888888888888887542
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI 544 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 544 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||...... .+...+... ...+.+..+++
T Consensus 178 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~--~~~~~~~~~~~------ 246 (327)
T 3lzb_A 178 GGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG--ERLPQPPICTI------ 246 (327)
T ss_dssp --CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTT--CCCCCCTTBCH------
T ss_pred CCCccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcC--CCCCCCccCCH------
Confidence 245678999999654 689999999999999999999 99999753322 222222211 11122233333
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 247 -------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 247 -------DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 34557778999999999999999999998753
No 100
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=5.7e-30 Score=269.55 Aligned_cols=206 Identities=20% Similarity=0.261 Sum_probs=156.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ......+.+.+|+.++++++|||||+++++|.+.+..++||
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATG-----RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred eEEEeeCcCEEEEEEEEcCCC-----CEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 578999999999999987765 89999999754 22333467889999999999999999999999999999999
Q ss_pred ecccCCcHHH-------------------------HHhc-c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYA-------------------------ALHG-F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~-------------------------~L~~-~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||++|+|.+ |||. . -|+++++.|+.+..++.++..|||..
T Consensus 228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 307 (446)
T 4ejn_A 228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307 (446)
T ss_dssp CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----C
T ss_pred eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccc
Confidence 9999999954 4554 3 46888888988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 308 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~~~~~----- 376 (446)
T 4ejn_A 308 TFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEIRFPRTLGPEA----- 376 (446)
T ss_dssp CSSSCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred cccCCccccCHhhcC-CCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCCCCCCccCCHHH-----
Confidence 236899999999954 468999999999999999999999999742 334444444445444455555544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||++|| |+.|+++
T Consensus 377 --------~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 377 --------KSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------HHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 3466669999999999 9999875
No 101
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.96 E-value=2.7e-29 Score=248.31 Aligned_cols=205 Identities=22% Similarity=0.326 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||++....++ ..||+|++.........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSG-----LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeccCCCeEEEEEEEccCC-----ceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 568999999999999987765 899999998764444458899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-----------------------------cc--cccccCCCCccccc---cCeEEecCCCcc-------
Q 007935 427 IRNGSLYAALH-----------------------------GF--GLNRLLPGTSKVTK---NETIVTSGTGSR------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~-----------------------------~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~------- 465 (584)
+++|+|.+++. +. -|+++.+.|+.+.. +..++..++|..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999976653 22 35677777777632 355677777643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc---ccChh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE---VIDPA 539 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~ 539 (584)
...||..|+|||++ . ..++.++|||||||++|||++|+.||.+. .................. .+++
T Consensus 182 ~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVF-K-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----SLEEVQQKATYKEPNYAVECRPLTP- 253 (285)
T ss_dssp -----CTTGGGCCHHHH-T-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCC--CCCCH-
T ss_pred cCcCcccccCcCChHHh-c-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----CHHHHHhhhccCCcccccccCcCCH-
Confidence 23688999999984 3 46899999999999999999999999742 233333333222221111 1222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 254 ------------~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 254 ------------QAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ------------HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ------------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3456778899999999999999985
No 102
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.96 E-value=7.3e-30 Score=264.43 Aligned_cols=231 Identities=17% Similarity=0.186 Sum_probs=166.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV~ 424 (584)
.++||+|+||.||+|+....+ +.||||+++........+.+.+|++++++++|||||++++++.+.+ ..++||
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTG-----DLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCeEEEEEEECCCC-----cEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 467999999999999998765 8999999986544444578899999999999999999999998765 679999
Q ss_pred ecccCCcHHHHHhc----------------------------c--cccccCCCCccc----cccCeEEecCCCcc-----
Q 007935 425 DFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKV----TKNETIVTSGTGSR----- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i----~~~~~~~~~~~~~~----- 465 (584)
||+++|+|.++++. . .|++++++|+.+ ..+..++..|||..
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 99999999766643 2 357778888766 33345667777643
Q ss_pred -----cccCCCcccCcccccc-------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 -----ISAISNVYLAPEARIY-------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 -----~~~gt~~y~aPE~~~~-------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. +..++.++|||||||++|||+||+.||......... ...+.......++ .
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKIITGKPSGA 247 (396)
T ss_dssp GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHHHSCCTTC
T ss_pred CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHhcCCCccc
Confidence 2368999999998543 146788999999999999999999999754433222 3333333332211 0
Q ss_pred cccc----------Chhhhh-hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 533 SEVI----------DPALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 533 ~~~~----------d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+ +..+.. ..........+.+++.+||+.||++|||+.|+++.++++-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 0000 000000 00012334466789999999999999999999999988743
No 103
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.96 E-value=1.2e-29 Score=249.88 Aligned_cols=206 Identities=21% Similarity=0.322 Sum_probs=161.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ ..||||++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSK-----FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeEEecCCCeEEEEEEEccCC-----cEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 467999999999999988775 799999986542 1222467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCcc---------ccc
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------ISA 468 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~ 468 (584)
||+++|+|.+++ |+.| |+++.+.|+.+..++.++..|+|.. ...
T Consensus 89 e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 168 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 168 (279)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------C
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccC
Confidence 999999996555 3333 6777888888877888888887632 236
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||..|+|||++. +..++.++||||||+++|||++|+.||.. .................+..+++.+
T Consensus 169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------- 234 (279)
T 3fdn_A 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----NTYQETYKRISRVEFTFPDFVTEGA-------- 234 (279)
T ss_dssp CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----SSHHHHHHHHHHTCCCCCTTSCHHH--------
T ss_pred CCCCccCHhHhc-cCCCCccchhHhHHHHHHHHHHCCCCCCC-----CcHHHHHHHHHhCCCCCCCcCCHHH--------
Confidence 899999999854 46889999999999999999999999974 2333344444444434444444444
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 235 -----~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 235 -----RDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -----HHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHhccChhhCCCHHHHhh
Confidence 34677799999999999999985
No 104
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.4e-29 Score=251.80 Aligned_cols=219 Identities=21% Similarity=0.306 Sum_probs=163.5
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce-eEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-LLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~-~lV~ 424 (584)
..++||+|+||.||+|.....+. ....||+|.+.........+.|.+|+.++++++|||||++++++.+.+.. ++||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQ--NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSS--CEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred cCceeccCCCceEEEEEEecCCC--ceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 45789999999999999765431 12579999998765555568899999999999999999999999876665 9999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+.+|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 99999999777643 2 367788888888777788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..+|..|+|||.+. +..++.++|||||||++|||+||..|+..... ...+........ ..+.+..+++
T Consensus 183 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~--- 255 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGR--RLPQPEYCPD--- 255 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHT-TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTC--CCCCCTTCCH---
T ss_pred ccCcCCCCCccccChhhhc-cCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCC--CCCCCccchH---
Confidence 24677899999954 46889999999999999999996666443211 122222222111 1112222333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 256 ----------~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 256 ----------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 34557778999999999999999999998753
No 105
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=1.7e-29 Score=259.91 Aligned_cols=209 Identities=15% Similarity=0.202 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+..... .....+.+|++++++++|||||++++++.+.+..++||||
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATG-----RVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEECCCC-----CEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999988765 8999999976432 2336799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCcccccc--CeEEecCCCccc----------
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN--ETIVTSGTGSRI---------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~--~~~~~~~~~~~~---------- 466 (584)
+++|+|.+++. +. .|+++++.|+.+..+ ..++..|+|...
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 99999976653 22 367788888777533 457777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. .......................+
T Consensus 210 ~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------ 277 (387)
T 1kob_A 210 TTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----DDLETLQNVKRCDWEFDEDAFSSV------ 277 (387)
T ss_dssp ECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHCCCCCCSSTTTTS------
T ss_pred eccCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCccccccC------
Confidence 36899999999954 467999999999999999999999999752 222333333332222111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 278 ---s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 278 ---SPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 113456888899999999999999985
No 106
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=1.7e-29 Score=276.01 Aligned_cols=213 Identities=20% Similarity=0.227 Sum_probs=161.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.+.... ..+.||||+++... .....++|.+|+++|++++|||||+++++|. .+..++|||
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E 449 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVME 449 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSS---CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEE
T ss_pred CCEeccCCCEEEEEEEEcCCC---cceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEE
Confidence 357999999999999664321 11789999998652 2333578999999999999999999999986 456899999
Q ss_pred cccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 426 FIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||++|+|.++++. . .|+|+++.|+.+..+..++..|||...
T Consensus 450 ~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 450 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred ccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999777642 2 468888899888888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ............ ...+..+++
T Consensus 530 ~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~~i~~~~~~~~p~~~~~---- 599 (635)
T 4fl3_A 530 THGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPR---- 599 (635)
T ss_dssp -----CGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred cCCCCceeeeChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999999654 689999999999999999999 999997532 222222222221 112222332
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.+|++.|+++.
T Consensus 600 ---------~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 600 ---------EMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp ---------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 4456788899999999999999999999874
No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.96 E-value=1.9e-29 Score=256.35 Aligned_cols=206 Identities=20% Similarity=0.305 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....++|.+|++++++++|||||++++++.+++..++||
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEccCCCEEEEEEEEccCC-----eEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 467999999999999986655 899999997642 2233467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------ccC
Q 007935 425 DFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------SAI 469 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~g 469 (584)
||++ |+|.+++ |.. .|+++++.|+.+..++.++..++|... ..|
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 9997 5775444 333 467888888888888888888887542 468
Q ss_pred CCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccChhhhhhhh
Q 007935 470 SNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDPALVKEIH 545 (584)
Q Consensus 470 t~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~~~~~~~~ 545 (584)
|+.|+|||++. .+..++.++|||||||++|||+||+.||.... .............+ . ...+++
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------- 280 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPALQSGHWSE------- 280 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCCCTTSCH-------
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCCCCCCCCCCCH-------
Confidence 99999999864 24578999999999999999999999997421 22222222222211 1 112222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 281 ------~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 281 ------YFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ------HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHcccChhhCcCHHHHhh
Confidence 3445777899999999999999975
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=1.4e-29 Score=257.35 Aligned_cols=201 Identities=17% Similarity=0.213 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +||||+++++++.+.+..|+|
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTD-----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEE-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 468999999999999998765 899999997642 223346788999999988 899999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.+++. .. .|++++++|+.+..++.++..++|..
T Consensus 100 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 179 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179 (353)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccc
Confidence 99999999976654 33 46888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+. ....+..........++..+++.+
T Consensus 180 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~p~~~s~~~----- 248 (353)
T 2i0e_A 180 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVAYPKSMSKEA----- 248 (353)
T ss_dssp CCCSCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred cccCCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 236899999999954 468999999999999999999999999742 334455555555544455455444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
.+++.+||+.||++||++
T Consensus 249 --------~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 249 --------VAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp --------HHHHHHHTCSCTTSCTTC
T ss_pred --------HHHHHHHhhcCHHHcCCC
Confidence 346667999999999964
No 109
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=1.6e-29 Score=248.62 Aligned_cols=210 Identities=20% Similarity=0.268 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ +.||||.+.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTE-----EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEeecCCCcEEEEEEECCCC-----cEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 467999999999999987655 799999997654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
+++|+|.++ ||+.| |.++.+.|+.+..++.++..+++...
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 166 (276)
T 2yex_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (276)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccC
Confidence 999998544 44444 57777888877777777777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.....++.++||||||+++|||+||+.||............+... .........+++
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 236 (276)
T 2yex_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDS-------- 236 (276)
T ss_dssp CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT--CTTSTTGGGSCH--------
T ss_pred CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc--ccccCchhhcCH--------
Confidence 3578899999996553334789999999999999999999998644332222222110 000001112222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 -----~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 237 -----APLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -----HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHCCCCchhCCCHHHHhc
Confidence 3456778899999999999999975
No 110
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=1.9e-29 Score=255.31 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=165.7
Q ss_pred cceeceeecCceEEEEEecCCC--CCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGS--GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~--~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+..... .......||||+++........+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 4578999999999999975321 11223789999998765555567899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.+++.. . .|+++++.|+.+..++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL 198 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 198 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEE
Confidence 9999999999887743 1 35677778877777777888
Q ss_pred cCCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHH
Q 007935 460 SGTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 460 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.++|... ..+|..|+|||++.. ..++.++|||||||++|||+| |+.||.+. ....+....
T Consensus 199 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~~ 272 (334)
T 2pvf_A 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELFKLL 272 (334)
T ss_dssp CCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHH
T ss_pred ccccccccccccccccccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcC-----CHHHHHHHH
Confidence 8776432 245678999998654 678999999999999999999 99999742 223333332
Q ss_pred hhcC-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.... ...+..+++ .+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 273 ~~~~~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 273 KEGHRMDKPANCTN-------------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp HHTCCCCCCTTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCCccCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2222 112222222 3455778899999999999999999999874
No 111
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=3.7e-30 Score=266.34 Aligned_cols=207 Identities=17% Similarity=0.204 Sum_probs=159.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||+|++++.. .....+.+.+|+.+++.++|||||+++++|.+++..|+||
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~-----~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTR-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEcCCCEEEEEEEECCCC-----cEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999998765 899999997531 1222356899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc------------c
Q 007935 425 DFIRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 466 (584)
|||++|+|.++++ .. -|++++++|+.+..++.++..|+|.. .
T Consensus 149 E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 228 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228 (410)
T ss_dssp CCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCS
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccC
Confidence 9999999976653 33 36888899988888888888888743 3
Q ss_pred ccCCCcccCccccccCC---CCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc----CCCCccccChh
Q 007935 467 SAISNVYLAPEARIYGS---KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE----RRPLSEVIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~---~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~d~~ 539 (584)
.+||+.|||||++.... .++.++|||||||++|||+||+.||.+. ............ ..+....+++.
T Consensus 229 ~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~~~~s~~ 303 (410)
T 3v8s_A 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNSLTFPDDNDISKE 303 (410)
T ss_dssp CCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHHCCCCTTCCCCHH
T ss_pred CcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-----ChhhHHHHHHhccccccCCCcccccHH
Confidence 46999999999965421 2789999999999999999999999742 223333333221 22212234444
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 576 (584)
+ .+++.+||..+|.+ ||++.||++
T Consensus 304 ~-------------~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 304 A-------------KNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp H-------------HHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred H-------------HHHHHHHccChhhhCCCCCHHHHhc
Confidence 4 34666699999988 999999975
No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-29 Score=249.81 Aligned_cols=213 Identities=19% Similarity=0.258 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+..||+|+||.||+|...... ....||||.++........+.+.+|++++++++||||+++++++ +.+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 90 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEM 90 (287)
T ss_dssp EEEEECCTTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccccccCceeEEEeEeccCC---CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEe
Confidence 347999999999999865321 11789999998765555568899999999999999999999999 56679999999
Q ss_pred ccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 427 IRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
+++|+|.+++.. . -|+++.+.|+.+..+..++..+++...
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 91 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp CTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 999999877632 2 357778888888777778887776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||..... ........... ...+..+++
T Consensus 171 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~---- 240 (287)
T 1u59_A 171 SAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPP---- 240 (287)
T ss_dssp CSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCH----
T ss_pred ccccccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHhcCCcCCCCCCcCH----
Confidence 235778999999654 678999999999999999999 9999975322 22222222221 122233333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++..||+.||++|||+.|+++.|+++.
T Consensus 241 ---------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 241 ---------ELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ---------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3445777799999999999999999999874
No 113
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=8e-30 Score=261.00 Aligned_cols=206 Identities=21% Similarity=0.246 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHH-HHhcCCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEA-IARVQHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~-l~~l~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~-----~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEE-----VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTC-----CEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997652 22233567788877 5778999999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.++++ .. .|++++++|+.+..++.++..|+|..
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~ 197 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence 99999999976653 33 46888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..+||+.|+|||++. +..++.++|||||||++|||++|+.||.+ ................++..+++.+
T Consensus 198 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~~~~~~~~~~~~----- 266 (373)
T 2r5t_A 198 TFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RNTAEMYDNILNKPLQLKPNITNSA----- 266 (373)
T ss_dssp SBSCCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCC-----SBHHHHHHHHHHSCCCCCSSSCHHH-----
T ss_pred cccCCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhcccCCCCCCCHHH-----
Confidence 236899999999955 46899999999999999999999999974 2334445555544444444444444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+||++.+.++
T Consensus 267 --------~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 267 --------RHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp --------HHHHHHHTCSSGGGSTTTTTTHH
T ss_pred --------HHHHHHHcccCHHhCCCCCCCHH
Confidence 34666799999999999864443
No 114
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=1.2e-29 Score=272.58 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=164.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.+..+ ..||||+++..... .++|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTT------EEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hheecccCCCeEEEEEEECCC------ceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 457899999999999999776 78999999865332 3789999999999999999999999866 77999999
Q ss_pred cccCCcHHHHHhc-----------------------------ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG-----------------------------FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||++|+|.++|+. ..|+++++.|+.+..+..++..|||...
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 9999999877752 2467888888888877888888887542
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVK 542 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~ 542 (584)
..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.. ..+......... .+.+..+++
T Consensus 422 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~~~~~~~---- 491 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYRMPCPPECPE---- 491 (535)
T ss_dssp CSTTSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH----
T ss_pred cCCcCcccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH----
Confidence 235678999998655 589999999999999999999 999997532 223333322221 111222222
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 492 ---------~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 492 ---------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 3456888899999999999999999999874
No 115
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=1.7e-29 Score=251.35 Aligned_cols=217 Identities=20% Similarity=0.309 Sum_probs=160.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe-CCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-~~~~~lV~ 424 (584)
..+.||+|+||.||+|+....++ ....||||.+.........+.|.+|+.++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hcceeeecCCceEEEEEEecCCC--ceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 35789999999999999765431 1257999999876555556889999999999999999999999754 56789999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++. . -|+++++.|+.+..+..++..++|...
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 186 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence 99999999777642 2 367788888888777778887876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~ 539 (584)
..+|+.|+|||.+.. ..++.++||||||+++|||++ |.+||...... .... ....... ..+..+++
T Consensus 187 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~- 259 (298)
T 3f66_A 187 HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITV---YLLQGRRLLQPEYCPD- 259 (298)
T ss_dssp -----CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHH---HHHTTCCCCCCTTCCH-
T ss_pred ccccCCCCCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHH---HHhcCCCCCCCccCCH-
Confidence 245678999998554 689999999999999999999 55556543221 1221 1222211 11222232
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 260 ------------~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 260 ------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 34567788999999999999999999999854
No 116
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.96 E-value=3.8e-29 Score=251.64 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=160.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch-----hhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-----RFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~-----~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~ 420 (584)
..+.||+|+||.||+|+...++ +.||||.++...... ..++|.+|++++++++||||+++++++.+.+..
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTG-----LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTC-----CEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred EeeEeeecCCEEEEEEEECCCC-----eEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3568999999999999988765 899999997652211 247799999999999999999999999999999
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~---- 465 (584)
++||||+++|+|.+++. .. -|+++.+.|+.+..++ .++..++|..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 99999999999977664 22 3577778887776665 5677777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.+. ................ ++.
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~----~~~ 240 (321)
T 2a2a_A 171 DGVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITSVSYDF----DEE 240 (321)
T ss_dssp TTCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCCC----CHH
T ss_pred ccccccccCCCCCccCccccc-CCCCCCccccHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhccccc----Chh
Confidence 235899999999854 468899999999999999999999999742 2233333333222211 111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..... ...+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~-----~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 241 FFSHT-----SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHTTC-----CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhccc-----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111 124567888999999999999999986
No 117
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.96 E-value=1.7e-29 Score=254.34 Aligned_cols=217 Identities=22% Similarity=0.328 Sum_probs=156.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce----
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK---- 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~---- 420 (584)
..+.||+|+||.||+|+....+.. ...||||.++... .....++|.+|++++++++|||||++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGS--FVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp EEEEEEEETTEEEEEEEC---------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred EeceecccCCeEEEEEEEcccCCc--ceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 356899999999999998765311 1379999997652 334457899999999999999999999999887665
Q ss_pred --eEeeecccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 421 --LLISDFIRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 421 --~lV~Ey~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
++||||+++|+|.+++. +. -|+++++.|+.+..+..++..|+|..
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccc
Confidence 99999999999976663 22 36778888888887888888888743
Q ss_pred c-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-C
Q 007935 466 I-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-R 530 (584)
Q Consensus 466 ~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~ 530 (584)
. ..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+.... . ......... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~---~~~~~~~~~~~ 258 (323)
T 3qup_A 185 RKIYSGDYYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--E---IYNYLIGGNRL 258 (323)
T ss_dssp ----------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G---HHHHHHTTCCC
T ss_pred ccccccccccccccccCcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccChH--H---HHHHHhcCCCC
Confidence 2 245678999999554 679999999999999999999 99999753321 1 222222221 1
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.....+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 259 ~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 259 KQPPECME-------------EVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp CCCTTCCH-------------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCccCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 12222222 34567888999999999999999999998743
No 118
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=2.6e-29 Score=252.12 Aligned_cols=219 Identities=21% Similarity=0.317 Sum_probs=165.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC-ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~-~~~lV 423 (584)
..+.||+|+||.||+|+..........+.||||+++........+.+.+|++++.++ +|||||++++++.+.+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999987543333344899999998765544557899999999999 7999999999998765 48999
Q ss_pred eecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEec
Q 007935 424 SDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~~ 460 (584)
|||+++|+|.++++. . .|+++.+.|+.+..+..++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~ 190 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEC
Confidence 999999999877642 1 356777778777777778887
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 526 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~ 526 (584)
++|... ..||..|+|||++.. ..++.++|||||||++|||+| |+.||....... .......
T Consensus 191 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~~~~~ 265 (316)
T 2xir_A 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLK 265 (316)
T ss_dssp CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----HHHHHHH
T ss_pred CCccccccccCccceeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhH----HHHHHhc
Confidence 776432 245778999998654 678999999999999999999 999997543221 1222221
Q ss_pred hc-CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 527 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 527 ~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ....+..+++. +.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 266 ~~~~~~~~~~~~~~-------------l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 266 EGTRMRAPDYTTPE-------------MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HTCCCCCCTTCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCHH-------------HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11223333333 445777799999999999999999999874
No 119
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.96 E-value=5.6e-30 Score=256.54 Aligned_cols=215 Identities=21% Similarity=0.229 Sum_probs=158.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce----
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK---- 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~---- 420 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.|.+|++++++++|||||++++++...+..
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDH-----RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----ceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 467999999999999987665 899999998652 223346799999999999999999999999876544
Q ss_pred eEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
++||||+++|+|.++++ +. -|+++++.|+.+..++.++..++|...
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 171 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence 99999999999976664 22 367788888888778888888887432
Q ss_pred -------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 467 -------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.+. .....................+.
T Consensus 172 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3ork_A 172 SVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----SPVSVAYQHVREDPIPPSARHEG 245 (311)
T ss_dssp ----------CCTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCCCCHHHHSTT
T ss_pred ccccccccCcCcccCCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhcCCCCCcccccCC
Confidence 24799999999954 468999999999999999999999999742 22333333333222111111111
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH-HHHHhh
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS-ESLDRV 581 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~-~~L~~i 581 (584)
....+.+++.+||+.||++||++.+++ ..+.++
T Consensus 246 ---------~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 246 ---------LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ---------CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 112455688889999999999777665 445544
No 120
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=2.8e-29 Score=249.35 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=160.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++....++ +.||+|.+.... .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTK-----EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCC-----ceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 468999999999999998765 799999987642 2334577999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++++|.+++ |..| |+++.+.|+.+..+..++..+++...
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccccc
Confidence 999999996554 3333 57777788877777777777776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++. +..++.++||||||+++|||+||+.||... ...+...........++..+++.+
T Consensus 175 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 242 (294)
T 2rku_A 175 LCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPKHINPVA------ 242 (294)
T ss_dssp CCSCCSSCCHHHHT-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCCTTSCHHH------
T ss_pred ccCCCCcCCcchhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhhccCCCccccCHHH------
Confidence 35788999999954 467899999999999999999999999742 223333333333333344444433
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 243 -------~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 243 -------ASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -------HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------HHHHHHHcccChhhCcCHHHHhh
Confidence 45677799999999999999985
No 121
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=1.9e-29 Score=254.49 Aligned_cols=214 Identities=23% Similarity=0.306 Sum_probs=162.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCce--EEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPT--VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~--~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
..+.||+|+||.||+|+...++ . .||||+++........+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDG-----LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETT-----EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeeeecCCCceEEEEEEccCC-----cccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 3568999999999999987664 4 45999998654444557899999999999 99999999999999999999
Q ss_pred eeecccCCcHHHHHhc-----------------------------------------c--cccccCCCCccccccCeEEe
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------------------F--GLNRLLPGTSKVTKNETIVT 459 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------------------~--g~~~~~~~~~~i~~~~~~~~ 459 (584)
||||+++|+|.++++. . -|+++.+.|+.+..+..++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence 9999999999887743 1 35777788888877777888
Q ss_pred cCCCccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc
Q 007935 460 SGTGSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 528 (584)
Q Consensus 460 ~~~~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~ 528 (584)
.++|... ..++..|+|||++.. ..++.++|||||||++|||+| |+.||.+. ............
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~~~~~~~ 257 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKLPQG 257 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHGGGT
T ss_pred cccCcCccccccccccCCCCCccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cHHHHHHHhhcC
Confidence 8877432 246778999998554 678999999999999999998 99999742 223333333222
Q ss_pred C-CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 529 R-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 529 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
. ...+..+++ .+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 258 ~~~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 258 YRLEKPLNCDD-------------EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp CCCCCCTTBCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1 111222232 34567788999999999999999999998743
No 122
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=1.4e-29 Score=250.74 Aligned_cols=212 Identities=25% Similarity=0.386 Sum_probs=164.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+ ..||||.+..... ..+.|.+|++++++++||||+++++++.+++..++|||
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGT-----EEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeecCCCCceeEEEeEecCCC-----EEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3468999999999999998765 8999999976432 34789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999777642 2 367778888888777778888876432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
..+|..|+|||++.. ..++.++||||||+++|||++ |+.||..... ......+.... ....+..+++
T Consensus 170 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~--~~~~~~~~~~----- 239 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDY--RMERPEGCPE----- 239 (288)
T ss_dssp TTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTC--CCCCCTTCCH-----
T ss_pred cCCccccCcCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccC--CCCCCCCCCH-----
Confidence 235667999999654 678999999999999999999 9999975322 12222222111 1112222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 240 --------~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 240 --------KVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 3455777799999999999999999998864
No 123
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.96 E-value=3e-29 Score=251.75 Aligned_cols=215 Identities=19% Similarity=0.226 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+++||+|+||.||+|+....+ +.||||++.... ....+.+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITS-----QEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSC-----CEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CceecCCceEEEEEEEEcCCC-----cEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457999999999999987665 899999997653 23347899999999995 79999999999999999999999
Q ss_pred cccCCcHHHHHh-------------------------cc--cccccCCCCccccccCe---EEecCCCccc---------
Q 007935 426 FIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNET---IVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~---~~~~~~~~~~--------- 466 (584)
|+++|+|.++++ +. .|++++++|+.+..++. ++..+++...
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 999999976664 22 36777778877765543 6666665321
Q ss_pred ---------ccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCc----------HHHHHH
Q 007935 467 ---------SAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG----------LESLVR 523 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~----------l~~~~~ 523 (584)
..||..|+|||++.. ...++.++|||||||++|||+||+.||......... ...+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 248999999998543 135789999999999999999999999864332211 111222
Q ss_pred HHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 524 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 524 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........++. ..... ....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~i~~~~~~~~~----~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 252 SIQEGKYEFPD----KDWAH-----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHCCCCCCH----HHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhccCcccCc----hhccc-----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 22222222111 00000 1124567888899999999999999986
No 124
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=4.3e-29 Score=253.57 Aligned_cols=222 Identities=21% Similarity=0.261 Sum_probs=166.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHh--cCCCceeeeeEEEEeCC----c
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAND----E 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~--l~HpnIV~l~g~~~~~~----~ 419 (584)
..+.||+|+||.||+|+.. + +.||||++.... .+.+.+|++++.. ++||||+++++++...+ .
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKWR-G------EEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp EEEEEEEETTEEEEEEEET-T------EEEEEEEECGGG----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred EEeeecCCCCcEEEEEEEc-C------ccEEEEEeCchh----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3578999999999999984 3 799999997532 2678899999988 79999999999998876 7
Q ss_pred eeEeeecccCCcHHHHH------------------------h--------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------H--------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~--------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.++||||+++|+|.+++ | .. -|+++++.|+.+..+..++..+++..
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 89999999999996554 5 22 35677778887777777888777642
Q ss_pred ---------------cccCCCcccCccccccCC-----CCCCccchhhHHHHHHHHHhC----------CCCCCCCCCCC
Q 007935 466 ---------------ISAISNVYLAPEARIYGS-----KFTQKCDVYSFGIVLLEILTG----------RLPDAGPENDG 515 (584)
Q Consensus 466 ---------------~~~gt~~y~aPE~~~~~~-----~~~~ksDV~SfGvvl~ElltG----------~~p~~~~~~~~ 515 (584)
...||..|+|||++.... .++.++|||||||++|||+|| +.||.......
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 126889999999854421 233689999999999999999 78887654444
Q ss_pred CcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 516 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 516 ~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.....+......... ...+.... ........+.+++.+||+.||++|||+.||++.|+++..+
T Consensus 275 ~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKL--RPNIPNRW----QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CCHHHHHHHHTTSCC--CCCCCGGG----GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHh--CCCCcccc----cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 445554444332221 11111111 1223455778899999999999999999999999998654
No 125
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=2.3e-29 Score=254.80 Aligned_cols=206 Identities=17% Similarity=0.244 Sum_probs=161.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||++....++ +.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTK-----EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 467999999999999998765 799999987642 2334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
||+++++|.+++ |.. .|+++.+.|+.+..+..++..+++...
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccc
Confidence 999999996554 333 367778888887777777887776432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||..|+|||++.. ..++.++|||||||++|||++|+.||... ...............++..+++.+
T Consensus 201 ~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 268 (335)
T 2owb_A 201 LCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEYSIPKHINPVA------ 268 (335)
T ss_dssp CCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCCCTTSCHHH------
T ss_pred cCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHhcCCCCCCccCCHHH------
Confidence 358889999999554 67899999999999999999999999742 223333333333333444444443
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||++|||+.|+++
T Consensus 269 -------~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 269 -------ASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -------HHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -------HHHHHHHccCChhHCcCHHHHhc
Confidence 44677799999999999999985
No 126
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=1.1e-29 Score=251.53 Aligned_cols=216 Identities=20% Similarity=0.312 Sum_probs=159.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+... .||||.++... .....+.|.+|++++++++||||+++++++ ..+..++|||
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred eeEecCCCCeEEEEEEEcC--------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4679999999999998643 59999997653 334457899999999999999999999965 5667899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++ +. -|+++++.|+.+..++.++..+++...
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 999999977663 22 367788888888778888888876432
Q ss_pred --ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-CccccChhhh
Q 007935 467 --SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-LSEVIDPALV 541 (584)
Q Consensus 467 --~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~d~~~~ 541 (584)
..||..|+|||++. .+..++.++|||||||++|||++|+.||..... .............. ....+....
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 254 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----RDQIIEMVGRGSLSPDLSKVRSNC- 254 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----HHHHHHHHHHTSCCCCTTSSCTTS-
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----HHHHHHHhcccccCcchhhccccC-
Confidence 35899999999854 235688899999999999999999999975322 22222222221111 011111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
...+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 255 --------~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 255 --------PKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp --------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred --------CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 12456688889999999999999999999998764
No 127
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=1.1e-29 Score=256.78 Aligned_cols=205 Identities=17% Similarity=0.278 Sum_probs=155.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||.||+|+...++ +.||||+++........+.+.+|++++++++|||||+++++|.+.+.
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDD-----CNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTC-----CEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred eeEecCCCCeEEEEEEEcCCC-----cEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 467999999999999998665 89999999865544455889999999999999999999999876543
Q ss_pred --------------------------------------------------eeEeeecccCCcHHHHHh------------
Q 007935 420 --------------------------------------------------KLLISDFIRNGSLYAALH------------ 437 (584)
Q Consensus 420 --------------------------------------------------~~lV~Ey~~~GsL~~~L~------------ 437 (584)
.++||||+++|+|.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 799999999999976653
Q ss_pred ----------------cc--cccccCCCCccccccCeEEecCCCccc-----------------------ccCCCcccCc
Q 007935 438 ----------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------------------SAISNVYLAP 476 (584)
Q Consensus 438 ----------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------~~gt~~y~aP 476 (584)
+. -|++++++|+.+..++.++..|+|... ..||+.|+||
T Consensus 166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 22 367888888888878888888887432 2589999999
Q ss_pred cccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHH
Q 007935 477 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHI 556 (584)
Q Consensus 477 E~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 556 (584)
|++. +..++.++|||||||++|||++|..|+.. ............. + ... ......+.++
T Consensus 246 E~~~-~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~~--~-----~~~-----~~~~~~~~~l 305 (332)
T 3qd2_B 246 EQIH-GNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLKF--P-----LLF-----TQKYPQEHMM 305 (332)
T ss_dssp HHHH-CCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTCC--C-----HHH-----HHHCHHHHHH
T ss_pred HHhc-CCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccCC--C-----ccc-----ccCChhHHHH
Confidence 9955 46899999999999999999998776431 1122222221111 1 110 1112344678
Q ss_pred HhcccCCCCCCCCChHHHHH
Q 007935 557 ALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 557 ~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+||+.||++|||+.|+++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHccCCCCcCCCHHHHhh
Confidence 88999999999999999986
No 128
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.96 E-value=6.5e-30 Score=266.55 Aligned_cols=207 Identities=17% Similarity=0.226 Sum_probs=160.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||+||+|+...++ +.||||++++.. .....+.+.+|+.++.+++|||||+++++|.+++..++||
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~-----~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNAD-----KVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEcCCC-----cEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 478999999999999998876 899999997531 1222355999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||++|+|.++|+. . -|+|++++|+.+..++.++..|||..
T Consensus 154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 99999999877753 2 36888999998888888888888743
Q ss_pred -cccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCCcc---c
Q 007935 466 -ISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPLSE---V 535 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~---~ 535 (584)
..+||+.|||||++.. +..++.++|||||||++|||+||+.||.+. ...+........ ...++. .
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~~~~ 308 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKERFQFPTQVTD 308 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHHCCCCSSCCC
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----ChhHHHHhhhhccccccCCccccc
Confidence 1479999999998651 357899999999999999999999999752 222222222211 111222 2
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCC--CCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 576 (584)
+++.+ .+++.+|+..+|++ ||+++|+++
T Consensus 309 ~s~~~-------------~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 309 VSENA-------------KDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp SCHHH-------------HHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCHHH-------------HHHHHHHhcccccccCCCCHHHHhC
Confidence 34433 44666788888877 999999875
No 129
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.7e-29 Score=248.95 Aligned_cols=215 Identities=20% Similarity=0.234 Sum_probs=159.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|....++ +.||||++.... .....+.|.+|+.++++++||||+++++++.+++..++||
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRE-----RIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCC-----eEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 467999999999999987665 899999997652 2223477999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 425 DFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
||+++|+|.++++. . -|+++.+.|+.+..++.++..+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (309)
T 2h34_A 114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193 (309)
T ss_dssp ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------------
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccccc
Confidence 99999999776642 2 35777788888877777888777632
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||..|+|||++.. ..++.++||||||+++|||+||+.||... ... ..........+......+.+.
T Consensus 194 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~---- 262 (309)
T 2h34_A 194 NTVGTLYYMAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGD-----QLS-VMGAHINQAIPRPSTVRPGIP---- 262 (309)
T ss_dssp ---CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSC-----HHH-HHHHHHHSCCCCGGGTSTTCC----
T ss_pred ccCCCcCccCHHHHcC-CCCCchHhHHHHHHHHHHHHHCCCCCCCc-----hHH-HHHHHhccCCCCccccCCCCC----
Confidence 2357889999999554 68899999999999999999999999742 112 222222222211111222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-ChHHHHHHHHhhh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRVK 582 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~i~ 582 (584)
..+.+++.+||+.||++|| |++++++.|+++.
T Consensus 263 -----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 263 -----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 1344577889999999999 9999999998764
No 130
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=2.1e-29 Score=254.18 Aligned_cols=218 Identities=21% Similarity=0.273 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+............||||++.........++|.+|+.++++++||||+++++++.+.+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 46799999999999996543222233789999997654445557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc--------------------------------c--cccccCCCCcccccc---CeEEecCCCcc----
Q 007935 427 IRNGSLYAALHG--------------------------------F--GLNRLLPGTSKVTKN---ETIVTSGTGSR---- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~--------------------------------~--g~~~~~~~~~~i~~~---~~~~~~~~~~~---- 465 (584)
+++|+|.++++. . -|+++.+.|+.+..+ ..++..++|..
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~ 194 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccc
Confidence 999999877753 1 356677777766633 34666676532
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSE 534 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 534 (584)
...||..|+|||++.. ..++.++|||||||++|||+| |+.||... ............. .....
T Consensus 195 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~ 268 (327)
T 2yfx_A 195 RASYYRKGGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVLEFVTSGGRMDPPK 268 (327)
T ss_dssp C------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHTTCCCCCCT
T ss_pred cccccccCCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----CHHHHHHHHhcCCCCCCCC
Confidence 2356888999998655 678999999999999999999 99998742 2223333332222 11222
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+++ .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 269 ~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 269 NCPG-------------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp TCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCH-------------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 2332 34557788999999999999999999988753
No 131
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=1.6e-29 Score=255.47 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=162.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||.+..... .+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTN-----EYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTT-----EEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCceEEEEEECCCC-----cEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 467999999999999986665 8999999976432 25789999999999 99999999999999999999999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccccccCe-----EEecCCCcc-------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNET-----IVTSGTGSR------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~-----~~~~~~~~~------- 465 (584)
|+ +|+|.++++ +. -|++++++|+.+..++. ++..|||..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99 999976664 22 36788888887776665 777777632
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||.+...+ ..............+.+
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHL-GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHc-CCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhhhccCC-
Confidence 236899999999955 468999999999999999999999999864322 23333322221111100
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... .... ++.+++..||+.||.+||++.+|.+.|+++.
T Consensus 241 ---~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 241 ---IEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp ---HHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ---HHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 00000 0011 5667888899999999999999999998764
No 132
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=3.1e-29 Score=248.58 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=158.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
+.||+|+||.||+|...... ..+.||||+++... .....++|.+|++++++++||||+++++++ +.+..++||||
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEECSSEEEEEEEEECSS---SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred CccccccCeeeEeeeecCCC---ceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 47999999999999653321 12799999998652 233357899999999999999999999999 66789999999
Q ss_pred ccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc-------------
Q 007935 427 IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------- 466 (584)
+++|+|.++++. . -|+++.+.|+.+..+..++..+++...
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 178 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccc
Confidence 999999776642 2 367788888888777878887776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||.... ............ ...+..+++
T Consensus 179 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 247 (291)
T 1xbb_A 179 HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPR----- 247 (291)
T ss_dssp --CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred cCCCCceeeChHHhcc-CCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCH-----
Confidence 235678999999654 578999999999999999999 999997532 222222222221 122222333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.|+++.|+++-
T Consensus 248 --------~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 248 --------EMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp --------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3455777899999999999999999999874
No 133
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.96 E-value=5e-29 Score=246.15 Aligned_cols=206 Identities=19% Similarity=0.282 Sum_probs=157.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhcCcCCeEEEEEEEcCCC-----ceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999987765 899999997652 33344778999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe---EEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET---IVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~---~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |+.| |+++.+.|+.+..+.. ++..++|..
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (284)
T 3kk8_A 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165 (284)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCC
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcccc
Confidence 99999996544 4333 5777777777755433 666777643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
...||+.|+|||++. +..++.++||||||+++|||++|+.||... ................+ ..+++
T Consensus 166 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (284)
T 3kk8_A 166 GFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQIKAGAYDYPSPEWDTVTP--- 236 (284)
T ss_dssp CSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCTTTTTTSCH---
T ss_pred CCCCCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCC-----chhHHHHHHHhccccCCchhhcccCH---
Confidence 246899999999954 467899999999999999999999999742 22233333322222111 12222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 237 ----------~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 237 ----------EAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------HHHHHHHHHcccChhhCCCHHHHhc
Confidence 3456777899999999999999985
No 134
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=2.1e-29 Score=253.60 Aligned_cols=218 Identities=21% Similarity=0.295 Sum_probs=166.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|+..........+.||||.+.........+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 35789999999999998763111111278999999876554555789999999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc-----------------------------------c--cccccCCCCccccccCeEEecCCCccc--
Q 007935 426 FIRNGSLYAALHG-----------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI-- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~-----------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-- 466 (584)
|+++|+|.++++. . .|+++++.|+.+..+..++..++|...
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 9999999877642 1 357777888888777788888877432
Q ss_pred -----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 467 -----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 467 -----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
..+|..|+|||++.. ..++.++|||||||++|||+| |+.||... .............. ...
T Consensus 189 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~ 262 (322)
T 1p4o_A 189 YETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVMEGGLLDKP 262 (322)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHTTCCCCCC
T ss_pred ccccccccccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccC-----CHHHHHHHHHcCCcCCCC
Confidence 235778999998554 678999999999999999999 89998742 22333333332221 122
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..+++ .+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 263 ~~~~~-------------~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 263 DNCPD-------------MLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTCCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred CCCCH-------------HHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 22222 3455778899999999999999999998864
No 135
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.96 E-value=1.2e-29 Score=264.58 Aligned_cols=211 Identities=19% Similarity=0.336 Sum_probs=149.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-------cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-------ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|....++ +.||||++.... .......+.+|+++|++++|||||++++++. .+.
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTC-----KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred EeEEeeCCCeEEEEEEECCCC-----cEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 578999999999999988776 899999997532 1112246899999999999999999999975 456
Q ss_pred eeEeeecccCCcHHH-------------------------HHhccc--ccccCCCCccccccC---eEEecCCCcc----
Q 007935 420 KLLISDFIRNGSLYA-------------------------ALHGFG--LNRLLPGTSKVTKNE---TIVTSGTGSR---- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-------------------------~L~~~g--~~~~~~~~~~i~~~~---~~~~~~~~~~---- 465 (584)
.++||||+++|+|.+ |||+.| |+++++.|+.+..+. .++..|||..
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~ 293 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence 899999999999954 445444 677888887775433 3777777643
Q ss_pred ------cccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 466 ------ISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
...||+.|+|||++.. ...++.++|||||||++|||+||+.||....... .+...+. ...... .
T Consensus 294 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~---~~~~~~----~ 365 (419)
T 3i6u_A 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT---SGKYNF----I 365 (419)
T ss_dssp -----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHH---TTCCCC----C
T ss_pred CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHh---cCCCCC----C
Confidence 2368999999998642 3568889999999999999999999997543322 2222221 111111 1
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 366 ~~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWAE-----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhcc-----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111111 1124567888899999999999999986
No 136
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=5.8e-30 Score=264.62 Aligned_cols=158 Identities=26% Similarity=0.375 Sum_probs=123.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCC--ceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND--EKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~--~~~l 422 (584)
.+.||+|+||.||+|....++ +.||||++... ......+.+.+|+.++.+++ |||||++++++...+ ..|+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTG-----EVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp EEC-------CEEEEEETTTC-----CEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred EEEeeeCCCeEEEEEEECCCC-----CEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 467999999999999987766 89999999754 23334577889999999997 999999999998654 6899
Q ss_pred eeecccCCcHHHH------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc----------
Q 007935 423 ISDFIRNGSLYAA------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|||||+ |+|.++ ||+.| |++++++|+.+..+..++..|||...
T Consensus 89 v~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 167 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167 (388)
T ss_dssp EEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC
T ss_pred EecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc
Confidence 999998 587544 44443 68888899888888888888887432
Q ss_pred ----------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 467 ----------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 467 ----------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
..||+.|+|||++.....++.++||||+||++|||++|+.||.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 26899999999866546799999999999999999999999975
No 137
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=1.6e-29 Score=250.25 Aligned_cols=222 Identities=18% Similarity=0.253 Sum_probs=156.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...+ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYG------ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp EEEEEEETTEEEEEEEETTS------CEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred hhhcccCCCEEEEEEEcCCC------CEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 45799999999999998544 7999999976532 2234778999999999999999999999999999999999
Q ss_pred cccCCcHHHHH--------------------------hccc--ccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAAL--------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L--------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++ +|.+++ |+.| |++++++|+.+..++.++..++|...
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp CCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred ecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 9985 775444 4433 67788888888888888888887432
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCc-----cccChhh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLS-----EVIDPAL 540 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~-----~~~d~~~ 540 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... ..+....+...... ...+ ..+++..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 357899999998655456899999999999999999999999753211 11111111110000 0000 0001100
Q ss_pred hh------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VK------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0000001234567888999999999999999975
No 138
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.96 E-value=2.1e-29 Score=265.67 Aligned_cols=219 Identities=18% Similarity=0.244 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||+||+|+....+ +.||||++... ......+++.+|+.++++++|||||++++++...+ .
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLD-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTT-----EEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred EEEeecCCCeEEEEEEECCCC-----CEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 467999999999999988765 89999999764 23334578999999999999999999999997653 4
Q ss_pred eeEeeecccCCcH----------------------HHHHhccc--ccccCCCCccccccCeEEecCCCcc----------
Q 007935 420 KLLISDFIRNGSL----------------------YAALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------~~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
.|+|||||+++.+ .+|||..| |++++++|+.+..+..++..|||..
T Consensus 142 ~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 221 (464)
T 3ttj_A 142 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 221 (464)
T ss_dssp EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC-
T ss_pred EEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccC
Confidence 6999999987533 24556554 6888899998888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCC------------
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPL------------ 532 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~------------ 532 (584)
...||+.|+|||++.. ..|+.++||||+||++|||++|+.||.+.. ..+........ ..+.
T Consensus 222 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~-----~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 222 PYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp ---CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 2468999999999654 689999999999999999999999997532 11111111110 0000
Q ss_pred --------------ccccChhhhh--hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 --------------SEVIDPALVK--EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 --------------~~~~d~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..+...+.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 0001122456789999999999999999999985
No 139
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=2.7e-29 Score=250.42 Aligned_cols=221 Identities=22% Similarity=0.284 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||+|++.... ....+.||||+++........+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTS-SSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEcccc-CccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 468999999999999853211 1122899999998664444557899999999999999999999999886 6689999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.++++ +. .|+++++.|+.+..++.++..++|...
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT 184 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEE
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCccee
Confidence 9999999987763 22 367888888888778888888876432
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC----------CCCCcHHHHHHHHhhcC-CC
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE----------NDGKGLESLVRKAFRER-RP 531 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~----------~~~~~l~~~~~~~~~~~-~~ 531 (584)
..||..|+|||++.. ..++.++||||||+++|||+||+.|+.... ........+........ .+
T Consensus 185 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (302)
T 4e5w_A 185 VKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 263 (302)
T ss_dssp CCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC
T ss_pred ccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC
Confidence 246777999998554 678899999999999999999999864210 00111111111111111 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+..++ ..+.+++.+||+.||.+|||+.|++++|+++.
T Consensus 264 ~~~~~~-------------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 264 CPPNCP-------------DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCTTCC-------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCC-------------HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 112222 24556888899999999999999999999874
No 140
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=3.2e-29 Score=267.06 Aligned_cols=205 Identities=17% Similarity=0.244 Sum_probs=162.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg-----~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATG-----KLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 367999999999999997765 899999997642 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
||+++|+|.+++.. . .|++++++|+.+..++.++..++|..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999776642 2 36888889988888888888887643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
...||+.|||||++. +..++.++|||||||++|||+||+.||..... ......+..........++..+++.+.
T Consensus 345 ~~~~~~GT~~Y~APE~l~-~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-~~~~~~~~~~i~~~~~~~p~~~s~~~~- 421 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRVLEQAVTYPDKFSPASK- 421 (543)
T ss_dssp CBCCCCSCTTTSCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-CCCHHHHHHHHHHCCCCCCTTSCHHHH-
T ss_pred ccccccCCccccChhhhc-CCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-chhHHHHHHHHhhcccCCCcccCHHHH-
Confidence 137999999999955 46899999999999999999999999986432 223444555555554444555555443
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+++.+||+.||++||++
T Consensus 422 ------------~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 422 ------------DFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ------------HHHHHHSCSSGGGSCCC
T ss_pred ------------HHHHHhccCCHhHCCCC
Confidence 46666999999999976
No 141
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.96 E-value=3.6e-29 Score=259.17 Aligned_cols=206 Identities=20% Similarity=0.302 Sum_probs=150.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~----~~~~~ 421 (584)
.++||+|+||+||++....++ +.||||+++.. ..+.+|++++.++ +|||||++++++.. .+..+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQ-----EKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeeeccCeEEEEEEECCCC-----CEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 357999999999999988765 89999999642 5678899987554 89999999999876 56789
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc---cCeEEecCCCcc----
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSR---- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---- 465 (584)
+|||||++|+|.++++. . .|++++++|+.+.. +..++..|||..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999777643 2 36778888887766 566777887743
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--cHHHHHHHHhhcCCCCccccC
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--GLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~d 537 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........ .....+. .....++....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~~~~~~~~~ 291 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYEFPNPEW 291 (400)
T ss_dssp -----------CTTCCGGGSC-CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTCCCCCTTTT
T ss_pred CCCccccCCCCCCccCHhhcC-CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCcccCCCccc
Confidence 236799999999954 46899999999999999999999999976443221 1222211 11111111000
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+ ...+.+++.+||+.||++|||+.|+++
T Consensus 292 ~~~---------s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 292 SEV---------SEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TTS---------CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccC---------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011 123456888899999999999999986
No 142
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=253.90 Aligned_cols=216 Identities=20% Similarity=0.256 Sum_probs=159.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~l 422 (584)
.+.||+|+||.||+++....+ +.||||++... .....+.+.+|++++++++|||||++++++.. .+..++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDG-----HFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTC-----CEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred EEEecCCCCeEEEEEEecCCC-----cEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 467999999999999986655 89999998764 33345789999999999999999999999973 346899
Q ss_pred eeecccCCcHHHHHhc-----------------------------c--cccccCCCCccccccCeEEecCCCccc-----
Q 007935 423 ISDFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
||||+++|+|.++++. . -|+++.+.|+.+..++.++..+++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999776643 2 357788888888777788888887421
Q ss_pred ---------------ccCCCcccCccccccC--CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC
Q 007935 467 ---------------SAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 529 (584)
Q Consensus 467 ---------------~~gt~~y~aPE~~~~~--~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 529 (584)
..||..|+|||++... ..++.++|||||||++|||++|+.||................ ...
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~ 265 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN--QLS 265 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--C--
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--cCC
Confidence 2468999999985432 136899999999999999999999986421112222222111 111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+....+++ .+.+++.+||+.||.+|||+.|+++.|++++.
T Consensus 266 ~~~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 266 IPQSPRHSS-------------ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp CCCCTTSCH-------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred CCccccCCH-------------HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 111122222 34567788999999999999999999998864
No 143
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=2.3e-29 Score=268.71 Aligned_cols=210 Identities=20% Similarity=0.192 Sum_probs=164.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++.... .....+.+.+|+++|++++|||||++++++.+.+..++||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg-----~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 468999999999999998765 899999997541 2223467899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc----------
Q 007935 425 DFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------- 465 (584)
||+++|+|.+++. .. .|++++++|+.+..++.++..|+|..
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 9999999976653 22 36888889988888888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .....+..........++..+++.+
T Consensus 344 ~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~-~~~~~i~~~i~~~~~~~p~~~s~~~----- 416 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK-IKREEVERLVKEVPEEYSERFSPQA----- 416 (576)
T ss_dssp CCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC-CCHHHHHHHHHHCCCCCCTTSCHHH-----
T ss_pred ccCCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccc-hhHHHHHHHhhcccccCCccCCHHH-----
Confidence 2478999999999554 67999999999999999999999999864322 2233333443333333444455544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
.+++.+||+.||.+|| ++.||++
T Consensus 417 --------~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 417 --------RSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --------HHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --------HHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 3466669999999999 6788764
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.96 E-value=5.2e-29 Score=249.45 Aligned_cols=223 Identities=19% Similarity=0.299 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTG-----QIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEeecCCeEEEEEEeCCCC-----cEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 467999999999999998765 8999999876533 2334678899999999999999999999999999999999
Q ss_pred cccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|.++ ||+.| |+++.+.|+.+..++.++..++|... .
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCC
Confidence 9999988544 34444 67788888888777888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-----------C--cc
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-----------L--SE 534 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-----------~--~~ 534 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||.+.... .....+........+ . ..
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccccccccccccccccccCc
Confidence 67889999998665467899999999999999999999999753221 111111111110000 0 00
Q ss_pred ccChhhhhhh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++.-.... ........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 00012235678999999999999999999985
No 145
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=4.2e-29 Score=248.44 Aligned_cols=214 Identities=14% Similarity=0.167 Sum_probs=160.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||++..... .+.+.+|+.++.++ +|+|++++++++.+.+..++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNN-----QQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTT-----EEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCC-----cEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 467999999999999986655 8999999875432 26789999999999 89999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCe-----EEecCCCcc-------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNET-----IVTSGTGSR------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~-----~~~~~~~~~------- 465 (584)
|+ +|+|.++++. . -|+++++.|+.+..++. ++..++|..
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99 9999777652 2 35777788877765543 777777632
Q ss_pred -----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CCC
Q 007935 466 -----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPL 532 (584)
Q Consensus 466 -----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~~ 532 (584)
...||+.|+|||++. +..++.++|||||||++|||+||+.||...... ............. .+.
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHhhccCccH
Confidence 235889999999954 467899999999999999999999999864322 1122221111110 110
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.. ..+. ....+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 243 ~~-~~~~---------~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 243 RE-LCAG---------FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HH-HTTT---------SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HH-HHhh---------CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 00 0111 1124566888899999999999999999999874
No 146
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=9.5e-29 Score=244.98 Aligned_cols=206 Identities=21% Similarity=0.330 Sum_probs=156.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
.+.||+|+||.||+|....++ ..||+|.+.... .....+.|.+|+.++++++|||||++++++.. .+..+
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~-----~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETT-----VEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeeccCCCCeEEEEeEecCCc-----eEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 457999999999999987765 899999997652 33345789999999999999999999999876 34589
Q ss_pred EeeecccCCcHHHHH-------------------------hccc----ccccCCCCcccc-ccCeEEecCCCcc------
Q 007935 422 LISDFIRNGSLYAAL-------------------------HGFG----LNRLLPGTSKVT-KNETIVTSGTGSR------ 465 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L-------------------------~~~g----~~~~~~~~~~i~-~~~~~~~~~~~~~------ 465 (584)
+||||+++|+|.+++ |..| |+++.+.|+.+. .+..++..+++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999996655 4333 566777777775 5567777777643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChhh
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPAL 540 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~~ 540 (584)
...||+.|+|||++ . ..++.++|||||||++|||+||+.||.... ..............+ .....++
T Consensus 186 ~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (290)
T 1t4h_A 186 FAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPASFDKVAIP-- 257 (290)
T ss_dssp SBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCGGGGGCCCH--
T ss_pred ccccccCCcCcCCHHHH-h-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCccccCCCCCH--
Confidence 24689999999984 4 368999999999999999999999997522 233333333322211 1111222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 258 -----------~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 258 -----------EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHccCChhhCCCHHHHhh
Confidence 3556888899999999999999985
No 147
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=9.3e-29 Score=243.30 Aligned_cols=208 Identities=17% Similarity=0.238 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ..||+|++..... ...+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTR-----IRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeecCCEEEEEEEeCCCC-----cEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467999999999999988765 7999999976432 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hccc--ccccCCCCccc---cccCeEEecCCCcc----------c
Q 007935 427 IRNGSLYAAL-------------------------HGFG--LNRLLPGTSKV---TKNETIVTSGTGSR----------I 466 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i---~~~~~~~~~~~~~~----------~ 466 (584)
+++|+|.+++ |+.| |+++.+.|+.+ ..+..++..+++.. .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~ 167 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCC
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhc
Confidence 9999996554 3333 57777788777 44566777777643 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++ . ..++.++||||||+++|||+||+.||.... ...............+.. ....
T Consensus 168 ~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~----~~~~--- 233 (277)
T 3f3z_A 168 KVGTPYYVSPQVL-E-GLYGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTFTFPEK----DWLN--- 233 (277)
T ss_dssp CCSCTTTCCHHHH-T-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCHH----HHTT---
T ss_pred cCCCCCccChHHh-c-ccCCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCCCCch----hhhc---
Confidence 3689999999984 4 358999999999999999999999997522 223333333332222211 0000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 234 --~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 --VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1124556788899999999999999984
No 148
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=9.6e-29 Score=246.70 Aligned_cols=209 Identities=18% Similarity=0.244 Sum_probs=155.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+++....+ +.||||.++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTG-----KLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCCCCceEEEEEECCCC-----CEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 468999999999999987655 8999999986432 2236789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh-------------------------cc--cccccCCCCccc---cccCeEEecCCCccc---------c
Q 007935 427 IRNGSLYAALH-------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSRI---------S 467 (584)
Q Consensus 427 ~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~~---------~ 467 (584)
+++|+|.+++. .. -|.++.+.|+.+ ..+..++..+++... .
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence 99999976653 33 356777777776 345667777776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++. +..++.++|||||||++|||++|+.||... .....................+.+
T Consensus 168 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~------- 234 (304)
T 2jam_A 168 CGTPGYVAPEVLA-QKPYSKAVDCWSIGVITYILLCGYPPFYEE-----TESKLFEKIKEGYYEFESPFWDDI------- 234 (304)
T ss_dssp HSCCCBCCTTTBS-SCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHCCCCCCTTTTTTS-------
T ss_pred cCCCCccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCccccccC-------
Confidence 5899999999954 468899999999999999999999999742 222333333332222111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 235 --SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp --CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred --CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 123456788899999999999999985
No 149
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=5.1e-29 Score=265.72 Aligned_cols=209 Identities=21% Similarity=0.326 Sum_probs=153.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ ..||||++.... .....+.+.+|+.++++++|||||+++++|.+.+..++|||
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTH-----VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp EEEEECC---EEEEEEETTTC-----CEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCC-----cEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 468999999999999988765 799999997652 22334789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hccc--ccccCCCCcccccc---CeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKN---ETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~---~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |..| |+++++.|+.+... ..++..++|..
T Consensus 117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~ 196 (494)
T 3lij_A 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196 (494)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBC
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcccc
Confidence 99999996554 4333 67788888777543 33677777642
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|+|||++ . ..++.++||||+||++|||++|+.||.+. ...............+.. +.. ..+
T Consensus 197 ~~~gt~~y~aPE~l-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~---~~~-~~~- 264 (494)
T 3lij_A 197 ERLGTAYYIAPEVL-R-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-----TDQEILRKVEKGKYTFDS---PEW-KNV- 264 (494)
T ss_dssp CCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCS---GGG-TTS-
T ss_pred ccCCCcCeeCHHHH-c-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCc---hhc-ccC-
Confidence 23689999999985 4 46999999999999999999999999752 233344444333322111 111 001
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||.+|||+.|+++
T Consensus 265 ----s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 265 ----SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 113456788899999999999999984
No 150
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=7.7e-29 Score=247.27 Aligned_cols=206 Identities=17% Similarity=0.300 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+....+ +.||||.+.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhcccCCeEEEEEEECCCC-----cEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 467999999999999987655 899999998765445568899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cccC
Q 007935 427 IRNGSLYAALH------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L~------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~g 469 (584)
+++|+|.+++. .. -|.++.+.|+.+..++.++..+++.. ...|
T Consensus 102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 181 (303)
T 3a7i_A 102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 181 (303)
T ss_dssp CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCS
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCC
Confidence 99999976653 33 35677778887777777777777643 2357
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCccccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~ 548 (584)
|..|+|||++.. ..++.++||||||+++|||++|+.||.... ............ ..+...+++
T Consensus 182 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------- 245 (303)
T 3a7i_A 182 TPFWMAPEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNNPPTLEGNYSK---------- 245 (303)
T ss_dssp CGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCCSSCCH----------
T ss_pred CcCccCHHHHhc-CCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCCCCCCccccCH----------
Confidence 889999999544 688999999999999999999999997422 122222222211 112223333
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 246 ---~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 246 ---PLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp ---HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---HHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3445777799999999999999986
No 151
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=5.6e-29 Score=245.85 Aligned_cols=206 Identities=19% Similarity=0.279 Sum_probs=160.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ ..||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNK-----FIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eheecCCCCeEEEEEEEcCCC-----cEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 468999999999999987765 899999996541 1222367999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc---------ccc
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR---------ISA 468 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~ 468 (584)
||+++|+|.+++. +. .|+++.+.|+.+..++.++..+++.. ...
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 173 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMC 173 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCC
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccccccccc
Confidence 9999999976653 33 35677778887777777888777632 246
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
|+..|+|||++. +..++.++||||||+++|||++|+.||... ...............++..+++.+
T Consensus 174 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------- 239 (284)
T 2vgo_A 174 GTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSP-----SHTETHRRIVNVDLKFPPFLSDGS-------- 239 (284)
T ss_dssp SCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCCCCCTTSCHHH--------
T ss_pred CCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCC-----CHhHHHHHHhccccCCCCcCCHHH--------
Confidence 889999999955 467899999999999999999999999742 223333333333333333344333
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+++.+||+.||.+|||+.|+++
T Consensus 240 -----~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 -----KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -----HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHhhcCHhhCCCHHHHhh
Confidence 45777799999999999999985
No 152
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=6.3e-29 Score=244.32 Aligned_cols=207 Identities=18% Similarity=0.241 Sum_probs=154.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+ +.||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTG-----HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeecCCCCeEEEEEEECCCC-----ceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 467999999999999987654 799999997542 2233468999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------c
Q 007935 425 DFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------~ 467 (584)
||+++++|.+++. .. -|.++.+.|+.+..+..++..+++... .
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 170 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecc
Confidence 9999999977663 22 356777788877777778887776432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHH
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 547 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 547 (584)
.||+.|+|||++......+.++||||||+++|||++|+.||... ...............++..+++.
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------- 237 (276)
T 2h6d_A 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPTLFKKIRGGVFYIPEYLNRS-------- 237 (276)
T ss_dssp ------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCTTSCHH--------
T ss_pred cCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHhhcCcccCchhcCHH--------
Confidence 57889999999654333468999999999999999999999742 23333333333333333334433
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 548 RQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 548 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 238 -----l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 238 -----VATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -----HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHHccCChhhCCCHHHHHh
Confidence 345777799999999999999986
No 153
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=1.4e-29 Score=254.38 Aligned_cols=222 Identities=21% Similarity=0.271 Sum_probs=162.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--CceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~--~~~~lV~ 424 (584)
.+.||+|+||.||++.+.... ....+.||||+++........+.|.+|++++++++|||||++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTN-DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC---CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCC-CCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 467999999999998764321 1223899999998765555567899999999999999999999999884 5689999
Q ss_pred ecccCCcHHHHHhc------------------------c--cccccCCCCccccccCeEEecCCCccc------------
Q 007935 425 DFIRNGSLYAALHG------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI------------ 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------------ 466 (584)
||+++|+|.+++.. . .|+++++.|+.+..+..++..|+|...
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 194 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 194 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC-
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccc
Confidence 99999999776643 2 367788888888777777777776432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----------CCcHHHHHHHHhhc-CCCCc
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----------GKGLESLVRKAFRE-RRPLS 533 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----------~~~l~~~~~~~~~~-~~~~~ 533 (584)
..+|..|+|||++.. ..++.++||||||+++|||+||+.||...... ......+....... ..+..
T Consensus 195 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (318)
T 3lxp_A 195 EDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP 273 (318)
T ss_dssp --CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCC
T ss_pred cCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCC
Confidence 246777999999654 67899999999999999999999998642110 00000111111111 11112
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 274 ~~~~-------------~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 274 DKCP-------------AEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp TTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccc-------------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 2222 245668888999999999999999999998864
No 154
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=262.46 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.++||+|+||.||+|+...++ +.||||++++.. .....+.+.+|..++.+++|||||++++++.+.+..|+||
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~-----~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTG-----QVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 478999999999999998765 899999997531 2223466899999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
||+++|+|.++++. . .|++++++|+.+..++.++..|||..
T Consensus 141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 99999999877643 2 36888889988888888888888743
Q ss_pred -cccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCCC---c
Q 007935 466 -ISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRPL---S 533 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~~---~ 533 (584)
..+||+.|||||++.. +..++.++|||||||++|||+||+.||.... ........... ...+ .
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~~ 295 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYGKIVHYKEHLSLPLVD 295 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTHHHHCCCC---
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcccCcCCCccc
Confidence 2378999999998652 3468999999999999999999999997522 22222222221 1111 1
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCC---CChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR---PRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Pt~~ev~~ 576 (584)
..++++ +.+++.+||. +|.+| |+++|+.+
T Consensus 296 ~~~s~~-------------~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 296 EGVPEE-------------ARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -CCCHH-------------HHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cCCCHH-------------HHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 233333 3457777999 99998 68888864
No 155
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=7.7e-29 Score=253.57 Aligned_cols=158 Identities=20% Similarity=0.320 Sum_probs=135.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ ..||+|++.........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~-----~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTC-----CEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred eeeecCCCCeEEEEEEECCCC-----cEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 468999999999999998665 899999998764445557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHH-------------------------hc---ccccccCCCCccccccCeEEecCCCcc---------cccC
Q 007935 427 IRNGSLYAAL-------------------------HG---FGLNRLLPGTSKVTKNETIVTSGTGSR---------ISAI 469 (584)
Q Consensus 427 ~~~GsL~~~L-------------------------~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~g 469 (584)
+++|+|.+++ |. ..|+++++.|+.+..++.++..|+|.. ...|
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g 192 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CC
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCC
Confidence 9999996655 32 246778888888888888888888743 2478
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
|+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 193 t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 193 TRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred CCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999954 46899999999999999999999999975
No 156
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.96 E-value=7.4e-29 Score=244.29 Aligned_cols=208 Identities=26% Similarity=0.355 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|...++ ..||||.++..... .+.|.+|++++++++||||+++++++. .+..++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGH------TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp EEEEEEETTEEEEEEEETTT------EEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred eeeecCCCCeEEEEEEEcCC------cEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 46799999999999998765 78999999765332 378999999999999999999999976 5568999999
Q ss_pred ccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 427 IRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 427 ~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
+++|+|.+++. .. -|+++.+.|+.+..+..++..+++...
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 99999977664 22 357777888877777777777776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~ 543 (584)
..++..|+|||++.. ..++.++||||||+++|||+| |+.||.+.. ..+.......... ..+..+++
T Consensus 169 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 237 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGYRMVRPDNCPE----- 237 (279)
T ss_dssp TCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCCCCCCTTCCH-----
T ss_pred CCCCccCccChhhhcc-CCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhcccCCCCcccccH-----
Confidence 235678999999654 578999999999999999999 999997422 2223322222211 11222222
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.+.+++.+||+.||++|||+.++++.|+++.
T Consensus 238 --------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 238 --------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999874
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.96 E-value=5.1e-29 Score=245.35 Aligned_cols=209 Identities=25% Similarity=0.382 Sum_probs=158.0
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-CceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-~~~~lV~ 424 (584)
..+.||+|+||.||++... + +.||||.++... ..+.|.+|++++++++|||||++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~------~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-G------NKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-T------EEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred EEeEEecCCCceEEEEEEc-C------CEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3568999999999999875 3 799999997643 237899999999999999999999997654 4789999
Q ss_pred ecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc--------c
Q 007935 425 DFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------S 467 (584)
Q Consensus 425 Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------~ 467 (584)
||+++|+|.+++.. . -|+++.+.|+.+..++.++..+++... .
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999766642 2 367777888888777788888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIH 545 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 545 (584)
.++..|+|||++.. ..++.++||||||+++|||+| |+.||..... .......... .......+++
T Consensus 175 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------- 241 (278)
T 1byg_A 175 KLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPP------- 241 (278)
T ss_dssp -CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCH-------
T ss_pred CccccccCHHHhCC-CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCH-------
Confidence 56788999999654 678999999999999999999 9999975322 1222222221 1112222333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 242 ------~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 ------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp ------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 34557777999999999999999999999864
No 158
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=2.5e-29 Score=254.71 Aligned_cols=208 Identities=21% Similarity=0.304 Sum_probs=155.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|....++ +.||||.+.... ..+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATN-----MEFAVKIIDKSK-----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEETTT-----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEccc-----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 468999999999999998765 899999997643 2346799999988 79999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc----CeEEecCCCcc---------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN----ETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~----~~~~~~~~~~~--------- 465 (584)
|+++|+|.+++ |+. -|++++++|+.+... ..++..|+|..
T Consensus 97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 99999997655 333 367788888775433 23677777632
Q ss_pred --cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhh
Q 007935 466 --ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 543 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~ 543 (584)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ......+..........+.....+.+.
T Consensus 177 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~s-- 251 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFSLSGGYWNSVS-- 251 (342)
T ss_dssp BCCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSST--TSCHHHHHHHHHHCCCCCCSTTTTTSC--
T ss_pred eeccCCCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCC--cCCHHHHHHHHccCCcccCccccccCC--
Confidence 2367999999999554 568999999999999999999999997532 223444444444433332211111111
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.+++.+||+.||++|||+.|+++
T Consensus 252 -------~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 252 -------DTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -------HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 13445777899999999999999874
No 159
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=1.2e-28 Score=243.32 Aligned_cols=216 Identities=17% Similarity=0.213 Sum_probs=160.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+....+ +.||||.++..... ...+.|.+|++++++++||||+++++++.+.+..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTG-----KEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcccCceEEEEEEEcCCC-----CeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 467999999999999988655 89999998764211 12478999999999999999999999999999999
Q ss_pred EeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC----eEEecCCCccc----
Q 007935 422 LISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE----TIVTSGTGSRI---- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~----~~~~~~~~~~~---- 466 (584)
+||||+++++|.+++. +. .|.++.+.|+.+..++ .++..+++...
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 9999999999977664 22 3567777777766554 56777776432
Q ss_pred ------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhh
Q 007935 467 ------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 540 (584)
Q Consensus 467 ------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~ 540 (584)
..||+.|+|||++. +..++.++||||||+++|||++|+.||.... ............... ++..
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~----~~~~ 234 (283)
T 3bhy_A 165 GNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVNYDF----DEEY 234 (283)
T ss_dssp -------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCCCC----CHHH
T ss_pred CCcccccCCCcCccCcceec-CCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhcccCC----cchh
Confidence 35889999999854 4688999999999999999999999997522 222222222222111 1111
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhhh
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRVK 582 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i~ 582 (584)
... ....+.+++.+||+.||++|||+.|+++ .++.++
T Consensus 235 ~~~-----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 235 FSN-----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HTT-----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ccc-----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 111 1124567888999999999999999986 455543
No 160
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=1.9e-29 Score=258.52 Aligned_cols=227 Identities=11% Similarity=0.115 Sum_probs=160.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch----------hhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------RFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~----------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|.+..++.....+.||||++....... ....+.+|+..+++++|||||++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 46799999999999999876544445789999987643110 11234556667778889999999999987
Q ss_pred C----CceeEeeecccCCcHHHHHh--------------------------cc--cccccCCCCcccc--ccCeEEecCC
Q 007935 417 N----DEKLLISDFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT--KNETIVTSGT 462 (584)
Q Consensus 417 ~----~~~~lV~Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~--~~~~~~~~~~ 462 (584)
. ...++||||+ +|+|.++++ .. -|+++++.|+.+. .+..++..||
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DF 198 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDY 198 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEEC
Confidence 5 4489999999 999976653 33 3688888888887 6677778887
Q ss_pred Cccc------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 463 GSRI------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 463 ~~~~------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
|... ..||+.|||||++. +..++.++|||||||++|||+||+.||.+...+. ........
T Consensus 199 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~~~~~~~ 276 (364)
T 3op5_A 199 GLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KYVRDSKI 276 (364)
T ss_dssp TTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHH
T ss_pred CcceecccCCcccccccCcccccCCCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HHHHHHHH
Confidence 7441 23899999999854 4679999999999999999999999998533221 12222222
Q ss_pred HhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 525 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 525 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... +.+..++.+.. .....++.+++..||+.||++||++.+|++.|+++.
T Consensus 277 ~~~~~--~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 277 RYREN--IASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHC--HHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred Hhhhh--HHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22111 11111111100 011235677888899999999999999999998763
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=247.86 Aligned_cols=206 Identities=17% Similarity=0.243 Sum_probs=140.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+....+ +.||||.+.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTG-----LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeeecCCCceEEEEEEEccCC-----ceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 467999999999999986655 799999997542 1223467999999999999999999999999999999999
Q ss_pred ecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++.. . .|.++.+.|+.+..+..++..+++...
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 170 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence 99999999766642 2 357777788877777777777776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
..||+.|+|||++.. ..++.++||||||+++|||+||+.||....... ............+..+++
T Consensus 171 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~------- 237 (278)
T 3cok_A 171 TLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKVVLADYEMPSFLSI------- 237 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSSCCCCCTTSCH-------
T ss_pred eccCCCCcCCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHHhhcccCCccccCH-------
Confidence 357889999998554 678999999999999999999999997533221 111111111122222232
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 238 ------~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 238 ------EAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHcccCHhhCCCHHHHhc
Confidence 3456778899999999999999975
No 162
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=7.3e-29 Score=250.21 Aligned_cols=211 Identities=17% Similarity=0.193 Sum_probs=157.3
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
..+.||+|+||.||+|....++ +.||||+++... .....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 33 TSKELGRGKFAVVRQCISKSTG-----QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred ccceeCCCCCeEEEEEEECCCC-----CEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 3478999999999999988765 899999997652 233357899999999999 569999999999999999999
Q ss_pred eecccCCcHHHHH---------------------------hccc--ccccCCCCccccc---cCeEEecCCCccc-----
Q 007935 424 SDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKVTK---NETIVTSGTGSRI----- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i~~---~~~~~~~~~~~~~----- 466 (584)
|||+++|+|.+++ |+.| |+++++.|+.+.. ++.++..++|...
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999985544 4333 5777788877665 4667777776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++. +..++.++|||||||++|||+||+.||.... ....................+.+
T Consensus 188 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~- 260 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILN-YDPITTATDMWNIGIIAYMLLTHTSPFVGED-----NQETYLNISQVNVDYSEETFSSV- 260 (327)
T ss_dssp ------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCTTTTTTS-
T ss_pred cccccccCCcCccCCeeec-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHHHhcccccCchhhccc-
Confidence 36899999999954 4689999999999999999999999997522 22222222222211111111111
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.+++.+||+.||++|||+.|+++
T Consensus 261 --------~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 261 --------SQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --------CHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 123456788899999999999999975
No 163
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=9.2e-29 Score=243.56 Aligned_cols=209 Identities=18% Similarity=0.230 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+.||+|+||.||+++...++ +.||+|.+.... .....+.|.+|++++++++||||+++++++.+ .+..++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred ehhccCCCCcEEEEEEECCCC-----cEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 467999999999999987665 899999997653 33345789999999999999999999998865 5678999
Q ss_pred eecccCCcHHHHHh-----------------------------c-------ccccccCCCCccccccCeEEecCCCccc-
Q 007935 424 SDFIRNGSLYAALH-----------------------------G-------FGLNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-----------------------------~-------~g~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
|||+++|+|.+++. . ..|+++.+.|+.+..+..++..+++...
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999976653 3 2356677777777777778888876432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccc
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEV 535 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 535 (584)
..||..|+|||++.. ..++.++||||||+++|||+||+.||.... ............. .++..
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFS-----QKELAGKIREGKFRRIPYR 239 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCCTT
T ss_pred eccccccccccCCCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccC-----HHHHHHHHhhcccccCCcc
Confidence 358899999999554 678999999999999999999999997532 2233333322221 22222
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 579 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 579 (584)
+++ .+.+++.+||+.||++|||+.|+++.+.
T Consensus 240 ~~~-------------~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 240 YSD-------------ELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp SCH-------------HHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cCH-------------HHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 333 3455777799999999999999997654
No 164
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=9.1e-29 Score=271.25 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=165.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
..+.||+|+||.||+|.....+. ....||||+++........+.|.+|+.++++++|||||++++++ .++..++|||
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E 470 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPEN--PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 470 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSS--CCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred EeeEEeeCCCEEEEEEEEecCCC--ccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEE
Confidence 35789999999999999865432 12789999998755555557899999999999999999999998 4567899999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc-----------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI----------- 466 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 466 (584)
|+++|+|.++++. . .|++++++|+.+..++.++..|+|...
T Consensus 471 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 550 (656)
T 2j0j_A 471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550 (656)
T ss_dssp CCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------
T ss_pred cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceecc
Confidence 9999999777642 2 467888889888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccChhhhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKE 543 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~~~~~ 543 (584)
..+|+.|||||++.. ..++.++|||||||++|||++ |+.||.+.. ..+........ ..+.+..+++
T Consensus 551 ~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~----- 619 (656)
T 2j0j_A 551 KGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIENGERLPMPPNCPP----- 619 (656)
T ss_dssp ---CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHHTCCCCCCTTCCH-----
T ss_pred CCCCCcceeCHHHhcC-CCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHcCCCCCCCccccH-----
Confidence 245678999999654 689999999999999999997 999997532 22233222222 2222333333
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 544 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 544 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 620 --------~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 620 --------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp --------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 34457778999999999999999999998743
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.96 E-value=2.9e-29 Score=253.77 Aligned_cols=201 Identities=15% Similarity=0.180 Sum_probs=156.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+....+ +.||||+++.... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKN-----KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTT-----EEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred EeEEEecCCEEEEEEEECCCC-----cEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 468999999999999987765 8999999986521 1133578899999999999999999999999999
Q ss_pred eeEeeecccCC-cHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc-----
Q 007935 420 KLLISDFIRNG-SLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI----- 466 (584)
Q Consensus 420 ~~lV~Ey~~~G-sL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~----- 466 (584)
.++||||+.+| +|.+++. .. -|+++++.|+.+..+..++..|+|...
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 183 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence 99999999877 8865553 33 367888888888888888888887432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||..... ........+..+++.
T Consensus 184 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~-- 250 (335)
T 3dls_A 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TVEAAIHPPYLVSKE-- 250 (335)
T ss_dssp CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTTTCCCCSSCCCHH--
T ss_pred CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HHhhccCCCcccCHH--
Confidence 35899999999965533348899999999999999999999974211 111111122233333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 251 -----------l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 251 -----------LMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----------HHHHHHHHccCChhhCcCHHHHhc
Confidence 445777799999999999999986
No 166
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=253.66 Aligned_cols=222 Identities=15% Similarity=0.182 Sum_probs=155.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|+...++ +.||||+++..........+.+|++++++++|||||++++++.+.+..++||||
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTD-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEEEECCCC-----cEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 467999999999999988665 899999997654333334677899999999999999999999999999999999
Q ss_pred ccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 427 IRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 427 ~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
++ |+|.+++ |+. .|+++++.|+.+..++.++..++|... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 160 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence 98 5776554 333 367888888888777888888887432 2
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccccChhhhhh--
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEVIDPALVKE-- 543 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~d~~~~~~-- 543 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||.+.... .....+........ .++...+......
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 57899999998665467899999999999999999999999753211 11111222111110 0111110000000
Q ss_pred ----------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 ----------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ----------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000011235678999999999999999999985
No 167
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=1.2e-28 Score=247.12 Aligned_cols=217 Identities=21% Similarity=0.330 Sum_probs=157.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-----
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE----- 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~----- 419 (584)
..+.||+|+||.||+|....... ....||||+++... .....+.|.+|+.++++++||||+++++++.+.+.
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDG--TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTS--CEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eccceeecCCeEEEEEEEeccCC--ceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 45789999999999998765321 12689999997652 33345779999999999999999999999987653
Q ss_pred eeEeeecccCCcHHHHHh-------------------------------cc--cccccCCCCccccccCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSLYAALH-------------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~-------------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~ 466 (584)
.++||||+++|+|.+++. .. -|+++++.|+.+..+..++..++|...
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence 599999999999987762 22 367777888888777788888876432
Q ss_pred -------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhc-CCC
Q 007935 467 -------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRP 531 (584)
Q Consensus 467 -------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~-~~~ 531 (584)
..++..|+|||.+. +..++.++||||||+++|||+| |+.||...... .. ....... ...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~---~~~~~~~~~~~ 269 (313)
T 3brb_A 196 KIYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EM---YDYLLHGHRLK 269 (313)
T ss_dssp ---------------CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH---HHHHHTTCCCC
T ss_pred ecccccccCcccccCCCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HH---HHHHHcCCCCC
Confidence 24567899999954 4689999999999999999999 88998753221 12 2222222 112
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+..+++ .+.+++.+||+.||++|||+.++++.|+++..
T Consensus 270 ~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 270 QPEDCLD-------------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp CBTTCCH-------------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccccH-------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2222332 34567778999999999999999999998753
No 168
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=1.4e-28 Score=261.90 Aligned_cols=205 Identities=20% Similarity=0.313 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||+||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQ-----QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTC-----CEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEeecCCEEEEEEEECCCC-----CEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 468999999999999987665 899999996541 22234789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCccccc---cCeEEecCCCcc----------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTK---NETIVTSGTGSR---------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~---~~~~~~~~~~~~---------- 465 (584)
|+++|+|.+++ |.. .|+++++.|+.+.. +..++..++|..
T Consensus 102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 181 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181 (486)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccC
Confidence 99999996554 433 36778888877743 345777777643
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
...||+.|+|||++ .+ .++.++||||+||++|||++|+.||.+. ................. ..+++
T Consensus 182 ~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~--- 251 (486)
T 3mwu_A 182 DRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVETGKYAFDLPQWRTISD--- 251 (486)
T ss_dssp CCTTGGGGCCGGGG-GS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCSCSGGGGGSCH---
T ss_pred CCcCCCCCCCHHHh-CC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCCCcccCCCCH---
Confidence 23689999999985 43 6999999999999999999999999752 22333333333322211 12222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 252 ----------~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 252 ----------DAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ----------HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----------HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3456788899999999999999986
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96 E-value=8.7e-29 Score=245.78 Aligned_cols=208 Identities=20% Similarity=0.287 Sum_probs=155.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..+||+|+||.||+|....++ +.||||.+.... ....+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQ-----VRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTC-----CEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEeecCcEEEEEEEECCCC-----eEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 358999999999999987665 899999997653 33347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc----------------------------c--cccccCCCCccccc-cCeEEecCCCcc----------
Q 007935 427 IRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTK-NETIVTSGTGSR---------- 465 (584)
Q Consensus 427 ~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~-~~~~~~~~~~~~---------- 465 (584)
+++|+|.+++.. . -|.++.+.|+.+.. +..++..+++..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 999999776642 2 35667777777765 566777777633
Q ss_pred -cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-HhhcCCCCccccChhhhh
Q 007935 466 -ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK-AFRERRPLSEVIDPALVK 542 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~d~~~~~ 542 (584)
...||..|+|||++..+ ..++.++||||||+++|||+||+.||...... ....... .......++..+++.
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--- 254 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFKVHPEIPESMSAE--- 254 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---HHHHHHHHHHCCCCCCCTTSCHH---
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---hHHHHhhccccccccccccCCHH---
Confidence 23688899999986543 23789999999999999999999999642211 1111111 112222233333333
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 255 ----------~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 255 ----------AKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----------HHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----------HHHHHHHHccCChhhCCCHHHHhc
Confidence 345777799999999999999975
No 170
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=6.9e-29 Score=250.89 Aligned_cols=223 Identities=19% Similarity=0.280 Sum_probs=160.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+...++ +.||||++..... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTC-----CEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEeecCCEEEEEEEECCCC-----ceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 468999999999999998765 8999999876533 2334668899999999999999999999999999999999
Q ss_pred cccCCcHHHH-------------------------Hhccc--ccccCCCCccccccCeEEecCCCccc-----------c
Q 007935 426 FIRNGSLYAA-------------------------LHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-----------S 467 (584)
Q Consensus 426 y~~~GsL~~~-------------------------L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 467 (584)
|+++++|.++ ||+.| |+++.+.|+.+..++.++..++|... .
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 184 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE 184 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------C
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCC
Confidence 9999887544 34444 67788888888777888888876432 3
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH----------hhc-----CCCC
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA----------FRE-----RRPL 532 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~----------~~~-----~~~~ 532 (584)
.||..|+|||++.....++.++|||||||++|||+||+.||...... ..+....... ... ...+
T Consensus 185 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T 4aaa_A 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263 (331)
T ss_dssp CCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred cCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence 68899999998655447899999999999999999999999753211 1111111100 000 0000
Q ss_pred ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.......... ........+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 264 PEIKEREPLER-RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCSSCCCHHH-HSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccchhhh-cccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11000000000 00012345778999999999999999999975
No 171
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=3.1e-29 Score=251.10 Aligned_cols=197 Identities=36% Similarity=0.589 Sum_probs=177.0
Q ss_pred CCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCc--ceeeEecC----CCEEEEEcCCCCCcc--cCCccccCCCCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCH--WSGIHCIR----NRVTSLYLPNRNLTG--YMPSELGLLNSL 91 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L 91 (584)
.|.++|.+||++||+++. +|. .+.+|..+ .+||. |.||+|+. ++|+.|+|++|+++| .+|..|+.+++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 467789999999999995 555 78999754 56777 99999985 689999999999999 899999999999
Q ss_pred CEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 92 TRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 92 ~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
++|+|++ |++.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+..+++|+ .|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV-GITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC-EEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC-eEECc
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cccCccccCccccCCC-CCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 171 FNQFSGQIPEMYGHFP-VMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|++++.+|..++.++ +|+.|+|++|.+++.+|.......+..+.+++|.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~ 208 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM 208 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSE
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCc
Confidence 9999999999999998 9999999999999988843322235666666664
No 172
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=3.7e-29 Score=252.59 Aligned_cols=222 Identities=18% Similarity=0.183 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++.... ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTN-----ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCC-----ceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 468999999999999987765 8999999976532 2234678899999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc-----CeEEecCCCcc--------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN-----ETIVTSGTGSR-------- 465 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~-----~~~~~~~~~~~-------- 465 (584)
|+++ +|.+++ |+. .|++++++|+.+..+ ..++..++|..
T Consensus 114 ~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 114 YAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp CCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred cCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 9984 886555 333 367788888877433 34777787643
Q ss_pred ---cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCC----------
Q 007935 466 ---ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRP---------- 531 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~---------- 531 (584)
...||..|+|||++.....++.++|||||||++|||++|+.||...... ..+.......... ...
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWPGVTALPDW 271 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence 2357899999999665456899999999999999999999999753211 1111111111000 000
Q ss_pred ---CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 ---LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ---~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+......+.... .......+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 272 KQSFPKFRGKTLKRVL-GALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTCCCCCCCCHHHHH-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccHhhhc-ccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000011111000 0011245678999999999999999999985
No 173
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=9.4e-29 Score=253.24 Aligned_cols=217 Identities=19% Similarity=0.281 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.....+ +.||||++... ......+++.+|++++++++|||||++++++...+ .
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred eEEeeecCCeEEEEEEECCCC-----CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 467999999999999987765 89999999664 23333577999999999999999999999998753 4
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
.++||||+ +++|.+++ |.. -|+++++.|+.+..+..++..++|...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 183 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT 183 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred EEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccC
Confidence 69999999 78886554 433 367888888888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccc----cC---
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEV----ID--- 537 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~----~d--- 537 (584)
..||+.|+|||++.....++.++||||+||++|||++|+.||.+... ...+...... ..+..+. .+
T Consensus 184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-----LDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 46899999999866546799999999999999999999999975321 1111111110 0000000 00
Q ss_pred ------------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 ------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 259 KNYMKGLPELEKKDFASIL--TNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHSCCCCCCCGGGTC--TTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCHHHHC--CCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000 011235677888999999999999999986
No 174
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=1.1e-28 Score=262.63 Aligned_cols=205 Identities=21% Similarity=0.324 Sum_probs=159.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITG-----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCC-----CEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 568999999999999988665 899999997542 2334578999999999999999999999999999999999
Q ss_pred ecccCCcHHHHH-------------------------hcc--cccccCCCCcccc---ccCeEEecCCCcc---------
Q 007935 425 DFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVT---KNETIVTSGTGSR--------- 465 (584)
Q Consensus 425 Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~---~~~~~~~~~~~~~--------- 465 (584)
||+++|+|.+++ |.. .|+++++.|+.+. .+..++..++|..
T Consensus 106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 185 (484)
T 3nyv_A 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185 (484)
T ss_dssp CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc
Confidence 999999996555 333 3677888888773 4466777887733
Q ss_pred -cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhh
Q 007935 466 -ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPAL 540 (584)
Q Consensus 466 -~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~ 540 (584)
...||+.|+|||++ .+ .++.++||||+||++|||++|+.||.+. ................. ..+++
T Consensus 186 ~~~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~s~-- 256 (484)
T 3nyv_A 186 KDKIGTAYYIAPEVL-HG-TYDEKCDVWSTGVILYILLSGCPPFNGA-----NEYDILKKVEKGKYTFELPQWKKVSE-- 256 (484)
T ss_dssp HHHTTGGGTCCHHHH-HT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCSGGGGGSCH--
T ss_pred ccCCCCccccCceee-cC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCCcccccCCH--
Confidence 23689999999985 43 6999999999999999999999999752 22333333333332211 12222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 257 -----------~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 257 -----------SAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -----------HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHHCCCChhHCcCHHHHhh
Confidence 3456778899999999999999984
No 175
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.96 E-value=7.8e-29 Score=250.06 Aligned_cols=222 Identities=19% Similarity=0.257 Sum_probs=160.8
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--CCceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~--~~~~~lV 423 (584)
..+.||+|+||.||+|++.... ....+.||||++.... ....+.|.+|++++++++||||+++++++.. .+..++|
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLG-DNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTS-SSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCC-CCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 3568999999999999853211 1112899999998753 3344779999999999999999999999884 4568999
Q ss_pred eecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 424 SDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
|||+++|+|.+++.. . -|+++++.|+.+..++.++..|++...
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 184 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 184 (327)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEE
T ss_pred EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccc
Confidence 999999999777643 2 367788888888778888887776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCC----------CCcHHHHHHHHhhcC-C
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND----------GKGLESLVRKAFRER-R 530 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~----------~~~l~~~~~~~~~~~-~ 530 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||.....+ ............... .
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (327)
T 3lxl_A 185 VVREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL 263 (327)
T ss_dssp ECSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC
T ss_pred eeeccCCccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC
Confidence 246777999998554 67899999999999999999999998642110 011111111111111 1
Q ss_pred CCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 531 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 531 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+.+..++ ..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 264 ~~~~~~~-------------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 264 PAPPACP-------------AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp CCCTTCC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred CCCCccc-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111222 245568888999999999999999999998754
No 176
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=2.2e-28 Score=261.44 Aligned_cols=209 Identities=18% Similarity=0.279 Sum_probs=155.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc------------hhhHhHHHHHHHHHhcCCCceeeeeEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT------------WRFKDFESEVEAIARVQHPNIVRLKAFY 414 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~------------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~ 414 (584)
.+.||+|+||+||+|+...++ +.||||++...... ...+.+.+|+.++++++|||||++++++
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGH-----SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTC-----CEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred EeEecccCCeEEEEEEECCCC-----cEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 468999999999999998776 89999999764211 2346799999999999999999999999
Q ss_pred EeCCceeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccC---eEEecCCCc
Q 007935 415 YANDEKLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNE---TIVTSGTGS 464 (584)
Q Consensus 415 ~~~~~~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~---~~~~~~~~~ 464 (584)
.+.+..++||||+++|+|.+++ |..| |+++++.|+.+..++ .++..++|.
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 195 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTT
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCC
Confidence 9999999999999999996555 3333 677888887776554 466777763
Q ss_pred c----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 465 R----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 465 ~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
. ...||+.|+|||++ . ..++.++||||+||++|||++|+.||.+. .................
T Consensus 196 a~~~~~~~~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~- 267 (504)
T 3q5i_A 196 SSFFSKDYKLRDRLGTAYYIAPEVL-K-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ-----NDQDIIKKVEKGKYYFD- 267 (504)
T ss_dssp CEECCTTSCBCCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCC-
T ss_pred CEEcCCCCccccccCCcCCCCHHHh-c-cCCCchHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCC-
Confidence 3 24689999999984 4 46999999999999999999999999752 23344444433332211
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......+ ...+.+++.+||+.||.+|||+.|+++
T Consensus 268 ---~~~~~~~-----s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 268 ---FNDWKNI-----SDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ---HHHHTTS-----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---ccccCCC-----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1110111 124556788899999999999999984
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=254.62 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=158.2
Q ss_pred ceeceeecCceEEEEEecCCCCCC---CceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceee--------------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-------------- 409 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~---~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~-------------- 409 (584)
.+.||+|+||.||+|+...++... ..+.||||.+... +.+.+|++++++++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 467999999999999987631100 1278999999753 56889999999999999998
Q ss_pred -eeEEEEe-CCceeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccC--e
Q 007935 410 -LKAFYYA-NDEKLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNE--T 456 (584)
Q Consensus 410 -l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~--~ 456 (584)
+++++.. ++..++||||+ +|+|.+++.. . -|+++++.|+.+..+. .
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~ 199 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQ 199 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCce
Confidence 6788876 67889999999 9999877753 2 3677788888777665 6
Q ss_pred EEecCCCccc------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcH
Q 007935 457 IVTSGTGSRI------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 518 (584)
Q Consensus 457 ~~~~~~~~~~------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l 518 (584)
++..++|... ..||+.|+|||++. +..++.++|||||||++|||+||+.||.........+
T Consensus 200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 278 (352)
T 2jii_A 200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI 278 (352)
T ss_dssp EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred EEEecCcceeeccCCCccccccccccccccCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence 7777776431 26889999999854 4689999999999999999999999998643222222
Q ss_pred HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 519 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
.............+.. +..... .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 279 ~~~~~~~~~~~~~~~~---~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 279 MKQKQKFVDKPGPFVG---PCGHWI----RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp HHHHHHHHHSCCCEEC---TTSCEE----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhccCChhhhhh---hccccC----CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 2222222222221111 100000 00124556778899999999999999999999874
No 178
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=1.9e-28 Score=242.34 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=153.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|.....+ +.||||+++.. .......++.+|+..+.++ +|||||++++++.+++..++||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDG-----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhcCCCceEEEEEEEcCCC-----ceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 468999999999999988655 89999999865 2333457899999999999 9999999999999999999999
Q ss_pred ecccCCcHHHHHhc-----------------------------c--cccccCCCCcccccc-------------------
Q 007935 425 DFIRNGSLYAALHG-----------------------------F--GLNRLLPGTSKVTKN------------------- 454 (584)
Q Consensus 425 Ey~~~GsL~~~L~~-----------------------------~--g~~~~~~~~~~i~~~------------------- 454 (584)
||+++|+|.++++. . -|+++++.|+.+..+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 99999999877642 2 367777777776532
Q ss_pred CeEEecCCCcc-------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 455 ETIVTSGTGSR-------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 455 ~~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
..++..+++.. ...||..|+|||++.....++.++|||||||++|||++|++|+.. ......+ ...
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~~~~~~---~~~ 243 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN----GDQWHEI---RQG 243 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS----SHHHHHH---HTT
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc----hhHHHHH---HcC
Confidence 24566676643 236899999999966544677899999999999999999987642 1111111 111
Q ss_pred cCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....++..+++. +.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~-------------~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 244 RLPRIPQVLSQE-------------FTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCCCCSSCCCHH-------------HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCcccCHH-------------HHHHHHHHhCCCcccCCCHHHHhh
Confidence 112233334443 345777799999999999999975
No 179
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=256.11 Aligned_cols=167 Identities=20% Similarity=0.344 Sum_probs=124.3
Q ss_pred hhhHhhhcceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe--
Q 007935 339 LEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-- 416 (584)
Q Consensus 339 ~~~l~~~~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~-- 416 (584)
+++.....++.||+|+||.||+|+..++. ..+.||||++...... +.+.+|+++|++++|||||++++++..
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~---~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGK---DDKDYALKQIEGTGIS---MSACREIALLRELKHPNVISLQKVFLSHA 91 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSS---CCCCEEEEECSSSSCC---HHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCC---CCeEEEEEEECCCCCC---HHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence 34444445678999999999999976431 1178999999764322 678999999999999999999999965
Q ss_pred CCceeEeeecccCCcHHHH----------------------------------Hhccc--ccccCCCCccc----cccCe
Q 007935 417 NDEKLLISDFIRNGSLYAA----------------------------------LHGFG--LNRLLPGTSKV----TKNET 456 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~----------------------------------L~~~g--~~~~~~~~~~i----~~~~~ 456 (584)
....++||||+++ +|.++ ||..| |+++++.|+.+ ..+..
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence 5678999999975 65433 34433 67788888877 44567
Q ss_pred EEecCCCccc--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 007935 457 IVTSGTGSRI--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 512 (584)
Q Consensus 457 ~~~~~~~~~~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~ 512 (584)
++..++|... ..||+.|+|||++.....++.++|||||||++|||+||+.||....
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 7888877432 3679999999986654568999999999999999999999997543
No 180
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=1.2e-28 Score=248.18 Aligned_cols=211 Identities=19% Similarity=0.330 Sum_probs=152.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc-------chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~-------~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+...++ +.||||.+..... ......|.+|++++++++||||+++++++..++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTC-----KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred eeEEecCCCEEEEEEEEcCCC-----cEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 468999999999999987765 8999999975421 122356899999999999999999999987654
Q ss_pred eeEeeecccCCcHHHHH-------------------------hccc--ccccCCCCccccccCe---EEecCCCccc---
Q 007935 420 KLLISDFIRNGSLYAAL-------------------------HGFG--LNRLLPGTSKVTKNET---IVTSGTGSRI--- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-------------------------~~~g--~~~~~~~~~~i~~~~~---~~~~~~~~~~--- 466 (584)
.++||||+++|+|.+++ |..| |+++.+.|+.+..++. ++..++|...
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 168 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence 89999999999996655 3333 5677777877765443 7777776432
Q ss_pred -------ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccC
Q 007935 467 -------SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVID 537 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d 537 (584)
..||..|+|||++. .+..++.++|||||||++|||++|+.||....... .+...+.. ..... .
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~---~~~~~----~ 240 (322)
T 2ycf_A 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS---GKYNF----I 240 (322)
T ss_dssp CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHH---TCCCC----C
T ss_pred cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHh---Ccccc----C
Confidence 35899999999853 23578999999999999999999999997543322 23222221 11111 1
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~-----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 241 PEVWAE-----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTT-----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhh-----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111 1224567888899999999999999974
No 181
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=246.65 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=152.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||+||+|+...++ +.||||++... .......++.+|+..+.++ +|||||+++++|.+++..++||
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDG-----RLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTS-----CEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eheeccCCCeEEEEEEECCCC-----eEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 468999999999999998655 89999998764 2223345667777777666 9999999999999999999999
Q ss_pred ecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCcc----------c
Q 007935 425 DFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR----------I 466 (584)
Q Consensus 425 Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------~ 466 (584)
||+ +|+|.+++ |.. -|++++++|+.+..+..++..|||.. .
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV 215 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence 999 66886554 333 36788889988888888888888743 2
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhH
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 546 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 546 (584)
..||+.|+|||++ .+ .++.++|||||||++|||++|..|+.. . .. ........ ..+.....
T Consensus 216 ~~gt~~y~aPE~~-~~-~~~~~~DiwslG~il~el~~g~~~~~~----~---~~-~~~~~~~~------~~~~~~~~--- 276 (311)
T 3p1a_A 216 QEGDPRYMAPELL-QG-SYGTAADVFSLGLTILEVACNMELPHG----G---EG-WQQLRQGY------LPPEFTAG--- 276 (311)
T ss_dssp CCCCGGGCCGGGG-GT-CCSTHHHHHHHHHHHHHHHHTCCCCSS----H---HH-HHHHTTTC------CCHHHHTT---
T ss_pred cCCCccccCHhHh-cC-CCCchhhHHHHHHHHHHHHhCCCCCCC----c---cH-HHHHhccC------CCcccccC---
Confidence 3589999999985 43 689999999999999999999777643 1 11 11111111 11111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 547 KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 547 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 277 --~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 277 --LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1235667888899999999999999985
No 182
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=7.7e-29 Score=255.93 Aligned_cols=205 Identities=17% Similarity=0.243 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|....+ +.||||++.... .....+.|.+|++++.+++ |||||++++++..++..++|
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEECCSSEEEEEEECTTC------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEccCCCeEEEEEEcCCC------CEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 46899999999999998764 799999997652 3334578999999999996 59999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|| +.+|+|.+++. .. .|+++++.|+.+. ++.++..|||..
T Consensus 135 ~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp EE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred Ee-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence 99 56789876654 32 4678888888774 466777777643
Q ss_pred --cccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--C
Q 007935 466 --ISAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--P 531 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~ 531 (584)
...||+.|+|||++.. ...++.++|||||||++|||++|+.||..... ............. .
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 288 (390)
T ss_dssp -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHCTTSCCC
T ss_pred CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----HHHHHHHHhCccccCC
Confidence 2368999999998543 13689999999999999999999999975321 1222222222211 1
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 289 ~~~~~~~-------------~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 289 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccchH-------------HHHHHHHHHcccChhhCCCHHHHhh
Confidence 2222222 3456778899999999999999985
No 183
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=1.7e-28 Score=244.61 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=155.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||+|.+.... ....+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETG-----ALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTC-----CEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred cceeccCCCeEEEEEEEcCCC-----cEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 457999999999999998765 799999997643 23347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++|+|.+++. .. .|.++.+.|+.+..++.++..++|.. ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 99999976653 22 36777788888877788888888642 23
Q ss_pred cCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhh
Q 007935 468 AISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPAL 540 (584)
Q Consensus 468 ~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~ 540 (584)
.||..|+|||++. .+..++.++|||||||++|||+||+.||.... .............+ ....+++
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 250 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPPTLLTPSKWSV-- 250 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSSGGGSCH--
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCcccCCccccCH--
Confidence 6899999999863 34678999999999999999999999997422 22222222222211 1112222
Q ss_pred hhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 251 -----------~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 251 -----------EFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----------HHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----------HHHHHHHHHcccChhhCCCHHHHhc
Confidence 3456788899999999999999975
No 184
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.2e-28 Score=251.47 Aligned_cols=214 Identities=19% Similarity=0.275 Sum_probs=161.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|+...+. ...+.||||+++... .....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 136 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGH--DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136 (355)
T ss_dssp EEEEEETTTEEEEEEEECSST--TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEeccCCCEEEEEEEEcccC--CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence 468999999999999985321 112899999997542 222346788999999999 79999999999999999999
Q ss_pred eeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 423 ISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
||||+++|+|.++++. . -|+++++.|+.+..++.++..+||...
T Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 216 (355)
T 1vzo_A 137 ILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216 (355)
T ss_dssp EECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG
T ss_pred EeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCc
Confidence 9999999999766642 2 467888888888878888888887432
Q ss_pred ---ccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhh
Q 007935 467 ---SAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 542 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~ 542 (584)
..||+.|+|||++..+ ..++.++|||||||++|||+||+.||..... ......+.........+.+..+++.
T Consensus 217 ~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 292 (355)
T 1vzo_A 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEPPYPQEMSAL--- 292 (355)
T ss_dssp GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-CCCHHHHHHHHHHCCCCCCTTSCHH---
T ss_pred ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc-cchHHHHHHHHhccCCCCCcccCHH---
Confidence 3689999999996542 3578999999999999999999999975332 2234444555444444444444433
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCCCCC-----ChHHHHH
Q 007935 543 EIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 576 (584)
Q Consensus 543 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 576 (584)
+.+++.+||+.||++|| |+.|+++
T Consensus 293 ----------~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 293 ----------AKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp ----------HHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ----------HHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 34577779999999999 8999875
No 185
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=2.5e-28 Score=241.04 Aligned_cols=204 Identities=18% Similarity=0.241 Sum_probs=158.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---------- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~---------- 416 (584)
.+.||+|+||.||+|+....+ +.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDG-----KTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTC-----CEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred eeeeccCCceEEEEEEEcCCC-----eEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 468999999999999987654 899999997632 467899999999999999999999865
Q ss_pred ------CCceeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecC
Q 007935 417 ------NDEKLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSG 461 (584)
Q Consensus 417 ------~~~~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~ 461 (584)
.+..++||||+++|+|.++++. . -|.++.+.|+.+..+..++..+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence 3458999999999999877742 2 3577778888787777788877
Q ss_pred CCcc----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 462 TGSR----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 462 ~~~~----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
++.. ...||+.|+|||++.. ..++.++|||||||++|||+||..|+.. ........... .
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~-------~~~~~~~~~~~--~ 235 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFE-------TSKFFTDLRDG--I 235 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSCCSSHHH-------HHHHHHHHHTT--C
T ss_pred chhheeccccccccccCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhcCCcchh-------HHHHHHHhhcc--c
Confidence 7632 2358899999999554 6789999999999999999999988642 11222222111 1
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
+...+++.+ .+++.+||+.||++|||+.|+++.|+.++.
T Consensus 236 ~~~~~~~~~-------------~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 236 ISDIFDKKE-------------KTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp CCTTSCHHH-------------HHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred ccccCCHHH-------------HHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 233344433 456777999999999999999999998764
No 186
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.2e-29 Score=250.77 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=143.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEe--------
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYA-------- 416 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~-------- 416 (584)
..+.||+|+||.||+|+....+ +.||||++.... ....+.+.+|+.++.++. |||||++++++..
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSG-----REYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTC-----CEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred EEEEEccCCceEEEEEEECCCC-----cEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4578999999999999987665 899999986543 333478999999999996 9999999999953
Q ss_pred CCceeEeeecccCCcHHHHH----------------------------hccc----ccccCCCCccccccCeEEecCCCc
Q 007935 417 NDEKLLISDFIRNGSLYAAL----------------------------HGFG----LNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L----------------------------~~~g----~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
....++||||+. |+|.+++ |..| |+++++.|+.+..+..++..+++.
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 334799999996 6875544 4334 677788888888778888888875
Q ss_pred cc-----------------------ccCCCcccCccccc--cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHH
Q 007935 465 RI-----------------------SAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 519 (584)
Q Consensus 465 ~~-----------------------~~gt~~y~aPE~~~--~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~ 519 (584)
.. ..||+.|+|||++. .+..++.++|||||||++|||+||+.||..... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~ 259 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-----L 259 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-----H
Confidence 42 24888999999852 345788999999999999999999999974221 1
Q ss_pred HHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 520 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 520 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
........ .+.....++. +.+++.+||+.||++|||+.|+++.|+++.
T Consensus 260 ~~~~~~~~--~~~~~~~~~~-------------~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 RIVNGKYS--IPPHDTQYTV-------------FHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------CC--CCTTCCSSGG-------------GHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcCccc--CCcccccchH-------------HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111 1112222222 334777799999999999999999999874
No 187
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=1.6e-28 Score=270.14 Aligned_cols=201 Identities=17% Similarity=0.222 Sum_probs=163.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV 423 (584)
.++||+|+||.||+|+...++ +.||||+++... .....+.+.+|..++..+ +||||+++++++.+.+..|+|
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~-----~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTD-----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSC-----CEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCC-----cEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 468999999999999998765 899999997641 223347789999999988 799999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|||+++|+|.++++ .. -|+|++++|+.+..++.++..|||..
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 500 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBC
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccc
Confidence 99999999976664 33 36889999999988888888888743
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhh
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIH 545 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~ 545 (584)
...||+.|||||++. +..|+.++|||||||++|||+||+.||.+ ....++..........++..+++++.
T Consensus 501 ~~~GT~~Y~APE~l~-~~~~~~~~DvwSlGvilyelltG~~Pf~~-----~~~~~~~~~i~~~~~~~p~~~s~~~~---- 570 (674)
T 3pfq_A 501 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----EDEDELFQSIMEHNVAYPKSMSKEAV---- 570 (674)
T ss_dssp CCCSCSSSCCHHHHT-CCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHSSCCCCCTTSCHHHH----
T ss_pred cccCCCcccCHhhhc-CCCCCccceEechHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhCCCCCCccCCHHHH----
Confidence 246899999999954 46899999999999999999999999974 23445556666555555555555544
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCh
Q 007935 546 AKRQVLATFHIALNCTELDPEFRPRM 571 (584)
Q Consensus 546 ~~~~~~~~~~l~~~Cl~~~P~~RPt~ 571 (584)
+++.+||+.||++||++
T Consensus 571 ---------~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 571 ---------AICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ---------HHHHHHSCSSSTTCTTC
T ss_pred ---------HHHHHHccCCHHHCCCC
Confidence 46666999999999998
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.96 E-value=6.7e-28 Score=246.77 Aligned_cols=211 Identities=20% Similarity=0.261 Sum_probs=159.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------hhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
.+.||+|+||.||+|+...++ +.||||+++..... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATG-----HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred ceEEecCCCEEEEEEEECCCC-----cEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 378999999999999997654 89999998764211 1235788999999999 8999999999999999
Q ss_pred ceeEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc------
Q 007935 419 EKLLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
..++||||+++|+|.+++. .. -|++++++|+.+..++.++..|+|..
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence 9999999999999976653 22 46888888988888888888888732
Q ss_pred ----cccCCCcccCcccccc-----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ----ISAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~-----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||+.|+|||++.. ...++.++|||||||++|||+||+.||... ..................
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~-- 326 (365)
T 2y7j_A 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR-----RQILMLRMIMEGQYQFSS-- 326 (365)
T ss_dssp CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCH--
T ss_pred cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCCCCC--
Confidence 2368999999998642 235889999999999999999999999742 122222222222211110
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 327 -~~~-~~-----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 -PEW-DD-----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HHH-SS-----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -ccc-cc-----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 110 00 1124566888899999999999999986
No 189
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=3e-28 Score=250.04 Aligned_cols=218 Identities=18% Similarity=0.262 Sum_probs=155.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------c
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~ 419 (584)
.+.||+|+||.||+|.....+ +.||||++... ......+.+.+|+.++++++|||||++++++...+ .
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred eeeeEecCCEEEEEEEECCCC-----ceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 467999999999999987765 89999999764 23334577899999999999999999999998765 6
Q ss_pred eeEeeecccCCcHHH-----------------------HHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLYA-----------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~-----------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||+++ +|.+ |||+.| |++++++|+.+..++.++..|+|...
T Consensus 105 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183 (371)
T ss_dssp EEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred eEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccccc
Confidence 8999999985 6644 344444 67888888888888888888887432
Q ss_pred --ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-CCCcc---ccChhh
Q 007935 467 --SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-RPLSE---VIDPAL 540 (584)
Q Consensus 467 --~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~---~~d~~~ 540 (584)
..||+.|+|||++.. ..++.++|||||||++|||+||+.||.+... ........... .+.++ .+.+.+
T Consensus 184 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 184 TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-----IDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred CCceecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 368899999999554 6899999999999999999999999975321 11111111110 00000 000000
Q ss_pred hh-------------------------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VK-------------------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~-------------------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ..........+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00 0001122456789999999999999999999986
No 190
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=1.2e-28 Score=250.02 Aligned_cols=207 Identities=16% Similarity=0.256 Sum_probs=156.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHH-HHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA-IARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~-l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++........+++..|+.+ ++.++|||||++++++.+++..++|||
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSG-----QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred eeEecccCCEEEEEEEEcCCC-----CEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 457999999999999987655 89999999876444444667777776 777899999999999999999999999
Q ss_pred cccCCcHHHHH-----------------------------hc---ccccccCCCCccccccCeEEecCCCccc-------
Q 007935 426 FIRNGSLYAAL-----------------------------HG---FGLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 426 y~~~GsL~~~L-----------------------------~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|+++ +|.+++ |. .-|+++++.|+.+..++.++..++|...
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 209 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA 209 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc
Confidence 9985 775443 42 3467888899888888888888887432
Q ss_pred ---ccCCCcccCccccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C-ccccCh
Q 007935 467 ---SAISNVYLAPEARI---YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L-SEVIDP 538 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~---~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~d~ 538 (584)
..||..|+|||++. .+..++.++|||||||++|||+||+.||..... ....+........+ . ...+++
T Consensus 210 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 285 (340)
T 3an0_A 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPSPQLPADKFSA 285 (340)
T ss_dssp HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCCCCCCGGGSCH
T ss_pred cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----hHHHHHHHhcCCCCCCCcccCCH
Confidence 47899999999853 224689999999999999999999999974321 12222222222211 1 111222
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 286 -------------~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 286 -------------EFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -------------HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------HHHHHHHHHccCCcccCcCHHHHhc
Confidence 3556788899999999999999985
No 191
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96 E-value=7.9e-29 Score=251.69 Aligned_cols=205 Identities=17% Similarity=0.241 Sum_probs=151.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCC--CceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQH--PNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~H--pnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||++....+ +.||||++.... .....+.|.+|++++.+++| ||||++++++.+++..++|
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp EEEESCCSSEEEEEEECTTS------CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred EEEEecCCCeEEEEEEeCCC------CEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46799999999999998665 799999997652 33345789999999999976 9999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|| +.+|+|.++++ .. -|+++++.|+.+. ++.++..|||..
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~ 165 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 165 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccccc
Confidence 99 56789876653 33 4678888888774 566777777643
Q ss_pred --cccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CC
Q 007935 466 --ISAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RP 531 (584)
Q Consensus 466 --~~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~ 531 (584)
...||+.|+|||++.. ...++.++|||||||++|||++|+.||..... ............ ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 241 (343)
T ss_dssp ----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHCTTSCCC
T ss_pred CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh----HHHHHHHHhcCCcccC
Confidence 2368999999998642 25688999999999999999999999974322 112222222211 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~-------------~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 242 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccCCH-------------HHHHHHHHHcCCChhHCCCHHHHHh
Confidence 2222222 3445777899999999999999985
No 192
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.96 E-value=3.4e-28 Score=241.58 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=156.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEE-EeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY-YANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~-~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||.+...... +.+.+|++++++++|+|++..++++ .+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAG-----EEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTT-----EEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred eeeecCCCCeEEEEEEEcCCC-----ceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 467999999999999986665 89999987654322 5689999999999988877777766 55677899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccc---cccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ +. -|+++++.|+.+ ..+..++..++|..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 99 999976654 22 367788888877 55667777777643
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC--cHHHHHHHHhhcCCC-Cc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--GLESLVRKAFRERRP-LS 533 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--~l~~~~~~~~~~~~~-~~ 533 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||........ .+............. ..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred ccCCCCcccccCCCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhh
Confidence 236889999999955 46799999999999999999999999986443221 122222221111100 00
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~~-------------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 244 KGYP-------------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp TTSC-------------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccCC-------------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 1112 24556888899999999999999999999874
No 193
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=247.49 Aligned_cols=223 Identities=24% Similarity=0.323 Sum_probs=160.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--ceeEe
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLI 423 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~--~~~lV 423 (584)
..+.||+|+||.||+++..... ....+.||||++... .....+.|.+|++++++++||||+++++++...+ ..++|
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQ-DNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTS-SSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred eeeeeccCCCeEEEEEEecccc-CCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 3578999999999999853210 111289999999864 3344578999999999999999999999987654 78999
Q ss_pred eecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 424 SDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
|||+++|+|.+++.. . -|+++.+.|+.+..++.++..+++...
T Consensus 123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~ 202 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYY 202 (326)
T ss_dssp ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEE
T ss_pred EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccccc
Confidence 999999999877643 2 357788888888777788887776432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCC----------CCCCcHHHHHHHHhhcC--
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE----------NDGKGLESLVRKAFRER-- 529 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~----------~~~~~l~~~~~~~~~~~-- 529 (584)
..++..|+|||++.. ..++.++|||||||++|||+||+.|+.... .........+.......
T Consensus 203 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 203 KVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp ECSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 235667999998554 578999999999999999999999876320 00000110111111111
Q ss_pred CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhcC
Q 007935 530 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKLQ 584 (584)
Q Consensus 530 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~~ 584 (584)
.+.+..++ ..+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 282 ~~~~~~~~-------------~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 282 LPRPDGCP-------------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CCCCTTCC-------------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccc-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11122222 2455688889999999999999999999998753
No 194
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=252.43 Aligned_cols=225 Identities=11% Similarity=0.093 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch----------hhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------RFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~----------~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|....++. ....||||+........ ..+.+.+|+..++.++||||+++++++.+
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~ 119 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPE--KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT 119 (345)
T ss_dssp EEEC------CEEEEEESSSCG--GGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCC--ccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence 4689999999999999876211 11789999987653211 12457789999999999999999999988
Q ss_pred ----CCceeEeeecccCCcHHHHHh-------------------------cc--cccccCCCCccccccC--eEEecCCC
Q 007935 417 ----NDEKLLISDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNE--TIVTSGTG 463 (584)
Q Consensus 417 ----~~~~~lV~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~--~~~~~~~~ 463 (584)
.+..++||||+ +|+|.+++. +. -|+++++.|+.+..+. .++..+||
T Consensus 120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg 198 (345)
T 2v62_A 120 EFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYG 198 (345)
T ss_dssp ESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCT
T ss_pred ccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCC
Confidence 67899999999 999976654 33 3677888888777665 77777776
Q ss_pred cc------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHH
Q 007935 464 SR------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 525 (584)
Q Consensus 464 ~~------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~ 525 (584)
.. ...||..|+|||++. +..++.++|||||||++|||+||+.||.....+....... ...
T Consensus 199 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~-~~~ 276 (345)
T 2v62_A 199 LSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA-KTN 276 (345)
T ss_dssp TCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH-HHH
T ss_pred CceecccccccccchhccccccCCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH-HHh
Confidence 43 236899999999955 4689999999999999999999999996432221111111 111
Q ss_pred hhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 526 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 526 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..... + +.+............+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 277 ~~~~~--~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 277 LLDEL--P----QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHTT--T----HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred hcccc--c----HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 11111 1 111100000012235667888899999999999999999998764
No 195
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95 E-value=2.8e-28 Score=248.54 Aligned_cols=222 Identities=14% Similarity=0.158 Sum_probs=157.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC--------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-------- 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-------- 417 (584)
.+.||+|+||.||+|+...++ +.||||++.... .......+.+|++++++++|||||++++++.+.
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTG-----QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTC-----CEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred EEEEecCCCcEEEEEEECCCC-----CEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 467999999999999987665 899999987652 222346789999999999999999999999873
Q ss_pred CceeEeeecccCCcHH--------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc---
Q 007935 418 DEKLLISDFIRNGSLY--------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--- 466 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~--------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--- 466 (584)
+..++||||+++ +|. .|||+.| |++++++|+.+..++.++..|+|...
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 468999999985 553 3445444 67888888888878888888876431
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCc
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLS 533 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~ 533 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+... ......+........ ...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhhc
Confidence 35788999999865545689999999999999999999999975321 111111222111110 000
Q ss_pred cccC---------------hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVID---------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d---------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ ..+............+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000000000011234678999999999999999999985
No 196
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.95 E-value=1.9e-28 Score=242.89 Aligned_cols=215 Identities=21% Similarity=0.284 Sum_probs=153.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
.+.||+|+||.||+|++....+ ....||||+++... .....+.|.+|++++++++||||+++++++.+++ .++||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~ 99 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSG--KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVT 99 (291)
T ss_dssp EEECC----CCCEEEEEECTTS--CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEE
T ss_pred eeeecCCCceeEEEEEeccCCC--ceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeE
Confidence 4679999999999998654321 11579999997642 3344578999999999999999999999997654 89999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
||+++|+|.+++. +. -|+++.+.|+.+..++.++..+++...
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179 (291)
T ss_dssp ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred ecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence 9999999976664 22 367788888888777888887776422
Q ss_pred ----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 ----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..+|..|+|||++.. ..++.++||||||+++|||++ |+.||... ............... ....+++
T Consensus 180 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 252 (291)
T 1u46_A 180 MQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----NGSQILHKIDKEGERLPRPEDCPQ- 252 (291)
T ss_dssp C-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTSCCCCCCCTTCCH-
T ss_pred hhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccC-----CHHHHHHHHHccCCCCCCCcCcCH-
Confidence 245678999999554 678999999999999999999 99999743 223333333332211 1122222
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
.+.+++.+||+.||++|||+.++++.|++++.
T Consensus 253 ------------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 253 ------------DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ------------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ------------HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 45567888999999999999999999998754
No 197
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.95 E-value=1.3e-28 Score=243.92 Aligned_cols=207 Identities=16% Similarity=0.254 Sum_probs=147.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHh-HHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++.........+ +.+|...++.++||||+++++++.+++..++|||
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSG-----QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HHhcCCCCCeEEEEEEecCCC-----eEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 467999999999999987665 8999999987533332233 4445556888899999999999999999999999
Q ss_pred cccCCcHHH-----------------------------HHhcc---cccccCCCCccccccCeEEecCCCccc-------
Q 007935 426 FIRNGSLYA-----------------------------ALHGF---GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 426 y~~~GsL~~-----------------------------~L~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|+++ +|.+ |||.. .|+++++.|+.+..+..++..++|...
T Consensus 87 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 87 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 9984 6643 34543 367788888888777888888876432
Q ss_pred ---ccCCCcccCcccc---ccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CC-ccccCh
Q 007935 467 ---SAISNVYLAPEAR---IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PL-SEVIDP 538 (584)
Q Consensus 467 ---~~gt~~y~aPE~~---~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~-~~~~d~ 538 (584)
..||+.|+|||++ ..+..++.++|||||||++|||+||+.||..... .... ......... .. ...+++
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQ-LKQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHH-HHHHHHSCCCCCCTTTSCH
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hHHH-HHHHhccCCCCcccccCCH
Confidence 3689999999985 2445789999999999999999999999974222 1222 222222221 11 112222
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||++|||+.|+++
T Consensus 242 -------------~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 242 -------------EFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------------HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------HHHHHHHHHhhcChhhCcCHHHHHh
Confidence 3456777899999999999999986
No 198
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.95 E-value=4.9e-28 Score=240.49 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=157.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEE-EeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY-YANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~-~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++...... +++.+|+.++++++|++++..++++ .+.+..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAG-----EEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEccCCCeEEEEEEEcCCC-----cEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 467999999999999986655 89999998764322 5789999999999998877777666 45667899999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCcccc---ccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVT---KNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~---~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ +. .|+++++.|+.+. .+..++..++|..
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99 899976664 22 3677888888773 5566777777632
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCC--CcHHHHHHHHhhcCCC-Cc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG--KGLESLVRKAFRERRP-LS 533 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~--~~l~~~~~~~~~~~~~-~~ 533 (584)
...||..|+|||++. +..++.++|||||||++|||+||+.||....... ..+............+ +.
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred cccccccccccccccccCChhhhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence 236889999999955 4679999999999999999999999998643321 1222222222211100 00
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
..++ ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~~-------------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 244 KGYP-------------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp TTSC-------------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhCC-------------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 1122 24556888899999999999999999999874
No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.95 E-value=4.4e-28 Score=243.02 Aligned_cols=203 Identities=16% Similarity=0.268 Sum_probs=152.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|....++ +.||||.+..... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETG-----QIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp EEECC----CEEEEEEETTTC-----CEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred heeeccCCCeEEEEEEECCCC-----CEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 467999999999999987755 8999999976432 37899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHh--------------------------cc--cccccCCCCccccccCeEEecCCCcc-----------cc
Q 007935 427 IRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR-----------IS 467 (584)
Q Consensus 427 ~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~ 467 (584)
+++|+|.+++. .. -|.++.+.|+.+..++.++..+++.. ..
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 185 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCcc
Confidence 99999977664 22 35677778887777777888777643 23
Q ss_pred cCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC---CccccChhhhhhh
Q 007935 468 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP---LSEVIDPALVKEI 544 (584)
Q Consensus 468 ~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~d~~~~~~~ 544 (584)
.||..|+|||++.. ..++.++||||||+++|||++|+.||.... .............+ ....+++
T Consensus 186 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 253 (314)
T 3com_A 186 IGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIH-----PMRAIFMIPTNPPPTFRKPELWSD------ 253 (314)
T ss_dssp CSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSSGGGSCH------
T ss_pred CCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCcccCCcccCCH------
Confidence 57889999999544 678999999999999999999999997422 11111111111111 1122222
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 545 HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 545 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 254 -------~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 254 -------NFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHHh
Confidence 3456788899999999999999975
No 200
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.95 E-value=4.9e-28 Score=244.49 Aligned_cols=221 Identities=15% Similarity=0.188 Sum_probs=156.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEe--CCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYA--NDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~--~~~~~lV 423 (584)
.+.||+|+||.||+|+...++ +.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred EEEecccCCeEEEEEEECCCC-----cEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 468999999999999987665 899999997532 277999999999997 9999999999998 5678999
Q ss_pred eecccCCcHHHH----------------------Hhccc--ccccCCCCccccccC-eEEecCCCccc----------cc
Q 007935 424 SDFIRNGSLYAA----------------------LHGFG--LNRLLPGTSKVTKNE-TIVTSGTGSRI----------SA 468 (584)
Q Consensus 424 ~Ey~~~GsL~~~----------------------L~~~g--~~~~~~~~~~i~~~~-~~~~~~~~~~~----------~~ 468 (584)
|||+++++|.++ ||+.| |+++++.|+.+..++ .++..|+|... ..
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 191 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCC
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccc
Confidence 999999998544 44444 677888888877555 67777776432 36
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC-----CCCccccChhhhhh
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER-----RPLSEVIDPALVKE 543 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~d~~~~~~ 543 (584)
||..|+|||++.....++.++|||||||++|||++|+.||.........+.......-... .......++.....
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (330)
T 3nsz_A 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271 (330)
T ss_dssp SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence 8889999999655467899999999999999999999999643222111111111000000 00000001110000
Q ss_pred ---------------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 544 ---------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 544 ---------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.........+.+++.+||+.||++|||++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000001245678899999999999999999986
No 201
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=8.9e-29 Score=248.65 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=156.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|...+ .||+|.++... .....+.|.+|+.++++++||||+++++++.+.+..++|||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred eeEeccCCceEEEEEEEcC--------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999998753 38999987642 23334678899999999999999999999999999999999
Q ss_pred cccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc------------
Q 007935 426 FIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------------ 465 (584)
Q Consensus 426 y~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------------ 465 (584)
|+++|+|.++++. . .|+++.+.|+.+. ++.++..++|..
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 9999999766642 2 3677888888775 455666676631
Q ss_pred ----cccCCCcccCcccccc--------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC-C
Q 007935 466 ----ISAISNVYLAPEARIY--------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-L 532 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~--------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~-~ 532 (584)
...||..|+|||++.. ...++.++|||||||++|||+||+.||.... .............+ .
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~ 263 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQMGTGMKPNL 263 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHHHTTCCCCC
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHhccCCCCCC
Confidence 1247889999998543 2357899999999999999999999997422 22233332222211 1
Q ss_pred -ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhhc
Q 007935 533 -SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 533 -~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
...+++. +.+++.+||+.||++|||+.|++++|+++..
T Consensus 264 ~~~~~~~~-------------l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 264 SQIGMGKE-------------ISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp CCSSCCTT-------------HHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred CcCCCCHH-------------HHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1122233 3457777999999999999999999998864
No 202
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.95 E-value=3.7e-28 Score=249.43 Aligned_cols=219 Identities=20% Similarity=0.256 Sum_probs=158.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCce-----
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK----- 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~----- 420 (584)
.+.||+|+||.||+|.....+ +.||||++.... .....+.+.+|+.++++++|||||++++++...+..
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSG-----EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred EeEEecCCCeEEEEEEECCCC-----CEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 467999999999999988765 899999998652 333357899999999999999999999999887655
Q ss_pred -eEeeecccCCcHHH-----------------------HHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 421 -LLISDFIRNGSLYA-----------------------ALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 421 -~lV~Ey~~~GsL~~-----------------------~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
++||||++ |+|.+ |||+.| |+++++.|+.+..+..++..|+|...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 200 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 200 (371)
T ss_dssp CEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------C
T ss_pred EEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCC
Confidence 99999998 57743 445444 67788888888888888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc---ccChh-hh
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE---VIDPA-LV 541 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~---~~d~~-~~ 541 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.. ..+........ ..+..+ .+... ..
T Consensus 201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 4689999999986554678999999999999999999999997522 12222221110 000000 00000 00
Q ss_pred hhh-----------h--HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEI-----------H--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~-----------~--~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
... . .......+.+++.+||+.||++|||+.|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000 0 0011245678899999999999999999985
No 203
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=1.8e-28 Score=250.88 Aligned_cols=155 Identities=21% Similarity=0.236 Sum_probs=128.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----CCceeeeeEEEEeCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----HPNIVRLKAFYYANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----HpnIV~l~g~~~~~~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||+++... ...+.+.+|++++.+++ |||||++++++...+..+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNK-----KYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred EEEEcccCCeEEEEEEECCCC-----eEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 468999999999999987765 899999997532 23367889999999996 999999999999999999
Q ss_pred EeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccc-------------------
Q 007935 422 LISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTK------------------- 453 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~------------------- 453 (584)
+||||+ +|+|.+++. +. -|+++++.|+.+..
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 999999 899976653 22 36778888877753
Q ss_pred ------cCeEEecCCCccc--------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 454 ------NETIVTSGTGSRI--------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 454 ------~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
+..++..|||... ..||+.|+|||++.. ..++.++|||||||++|||+||+.||..
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 4566777776432 468999999999654 6899999999999999999999999975
No 204
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.95 E-value=6.3e-28 Score=239.95 Aligned_cols=211 Identities=18% Similarity=0.246 Sum_probs=158.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--------chhhHhHHHHHHHHHhcC-CCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--------TWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--------~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||.||+|....++ +.||||.++.... ....+.+.+|++++++++ ||||+++++++.++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTC-----KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred eeeecCCCceEEEEEEEcCcC-----ceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence 467999999999999997765 8999999975421 122467889999999995 99999999999999
Q ss_pred CceeEeeecccCCcHHHHHhc-------------------------c--cccccCCCCccccccCeEEecCCCccc----
Q 007935 418 DEKLLISDFIRNGSLYAALHG-------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 418 ~~~~lV~Ey~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
+..++||||+++|+|.+++.. . .|.++.+.|+.+..++.++..+++...
T Consensus 97 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176 (298)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence 999999999999999776642 2 356777788877777777777776432
Q ss_pred ------ccCCCcccCccccc-----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccc
Q 007935 467 ------SAISNVYLAPEARI-----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 535 (584)
Q Consensus 467 ------~~gt~~y~aPE~~~-----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 535 (584)
..||..|+|||++. ....++.++||||||+++|||++|+.||... ..................
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~- 250 (298)
T 1phk_A 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----KQMLMLRMIMSGNYQFGS- 250 (298)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCT-
T ss_pred CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-----cHHHHHHHHhcCCcccCc-
Confidence 35889999999854 2356889999999999999999999999742 122233333322221111
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... . ....+.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~-~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 251 --PEWD-D-----YSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --TTGG-G-----SCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --cccc-c-----cCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1100 0 1124556888899999999999999975
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=241.42 Aligned_cols=206 Identities=21% Similarity=0.294 Sum_probs=153.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---cchhhHhHHHHHHHHHhcCCCceeeeeEEEE--eCCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYY--ANDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~--~~~~~~ 421 (584)
.+.||+|+||.||++.....+ +.||||.++... .....+.+.+|++++++++||||+++++++. +.+..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETL-----CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTC-----CEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred eeEEecCCCeEEEEEEECCCC-----cEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 467999999999999987765 899999997642 1233478999999999999999999999985 345789
Q ss_pred EeeecccCCcHH---------------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-------
Q 007935 422 LISDFIRNGSLY---------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR------- 465 (584)
Q Consensus 422 lV~Ey~~~GsL~---------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~------- 465 (584)
+||||+++| |. .+||+.| |+++.+.|+.+..++.++..+++..
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999999987 43 3344444 6777888888877777777777643
Q ss_pred ------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccCh
Q 007935 466 ------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDP 538 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~ 538 (584)
...||..|+|||++... ..++.++|||||||++|||++|+.||.. ................++..+++
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----~~~~~~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-----DNIYKLFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHCCCCCCSSSCH
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHhcCCCCCCCccCH
Confidence 23588999999985432 2347799999999999999999999974 22334444444443333444444
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+ .+++.+||+.||++|||+.|+++
T Consensus 239 ~l-------------~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 239 PL-------------SDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HH-------------HHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HH-------------HHHHHHHccCChhhCCCHHHHhc
Confidence 33 45677799999999999999986
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.95 E-value=1.1e-28 Score=246.05 Aligned_cols=215 Identities=20% Similarity=0.302 Sum_probs=141.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeeec
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
.+.||+|+||.||+|.....+ +.||||++.........+++.+|++++++++||||+++++++...+..++||||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKK-----EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp EEECC---CCCEEEEEC---------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hheeccccceEEEEEEECCCC-----cEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 467999999999999987654 799999997654344457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhc---------------------------------c--cccccCCCCccccccCeEEecCCCcc------
Q 007935 427 IRNGSLYAALHG---------------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR------ 465 (584)
Q Consensus 427 ~~~GsL~~~L~~---------------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~------ 465 (584)
+++|+|.+++.. . .|+++.+.|+.+..++.++..+++..
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 999999877642 1 35677777777777777777777532
Q ss_pred ----------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCcc
Q 007935 466 ----------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSE 534 (584)
Q Consensus 466 ----------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 534 (584)
...||+.|+|||++.....++.++|||||||++|||+||+.||...... ... ........ ....
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~-~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVL-MLTLQNDPPSLET 249 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----GHH-HHHHTSSCCCTTC
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----hHH-HHHhccCCCcccc
Confidence 2358899999998654346899999999999999999999999753221 111 11111111 1111
Q ss_pred -ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 -VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 -~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++..... ....+.+++.+||+.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEMLKK-----YGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCCCC-----CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhhh-----hhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011111111 1124567888899999999999999985
No 207
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.95 E-value=3.1e-28 Score=249.12 Aligned_cols=219 Identities=18% Similarity=0.237 Sum_probs=149.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC------Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~------~~ 419 (584)
.+.||+|+||.||+|....++ +.||||++... ......+.+.+|++++++++|||||++++++... ..
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTG-----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp EEECC----CCEEEEEETTTT-----EEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eeEEeecCCeEEEEEEECCCC-----CEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 467999999999999987765 89999999764 2333457889999999999999999999999764 56
Q ss_pred eeEeeecccCCcHH------------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc-------
Q 007935 420 KLLISDFIRNGSLY------------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~------------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
.++||||+ +++|. .|||..| |+++++.|+.+..+..++..++|...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 187 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187 (367)
T ss_dssp CEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred EEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCC
Confidence 89999999 57774 3445444 67888888888888888888887432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCc----cccChhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLS----EVIDPAL 540 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~----~~~d~~~ 540 (584)
..||..|+|||++.....++.++||||+||++|||+||+.||.+... ...+...... ..+.. ...+...
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p~~~~~~~~~~~~~ 262 (367)
T 2fst_X 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTPGAELLKKISSESA 262 (367)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHTTCCCHHH
T ss_pred CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 36899999999866546799999999999999999999999975321 1111111110 00000 0000000
Q ss_pred hhhhh-----------H--HHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 541 VKEIH-----------A--KRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 541 ~~~~~-----------~--~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..... . ......+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000 0 001235678899999999999999999985
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.95 E-value=1.2e-27 Score=238.14 Aligned_cols=221 Identities=18% Similarity=0.225 Sum_probs=154.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||+++... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTG-----EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTC-----CEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhccCCCeeEEEEEEcCCC-----ceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 467999999999999987655 899999997642 22234778999999999999999999999999999999999
Q ss_pred cccCCcHHHHH---------------------------hcc--cccccCCCCccccccCeEEecCCCcc-----------
Q 007935 426 FIRNGSLYAAL---------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR----------- 465 (584)
Q Consensus 426 y~~~GsL~~~L---------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~----------- 465 (584)
|++ |+|.+++ |+. .|+++.++|+.+..++.++..+++..
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccC
Confidence 998 5886555 333 35777788888877788888887632
Q ss_pred cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--------------C
Q 007935 466 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--------------P 531 (584)
Q Consensus 466 ~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--------------~ 531 (584)
...||..|+|||++.....++.++|||||||++|||+||+.||.+.... ..+............ .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
T 2r3i_A 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240 (299)
T ss_dssp SCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred cccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcCcccchh
Confidence 2357889999998655445899999999999999999999999753211 111111111100000 0
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.......+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 241 FPKWARQDFSKVV--PPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp SCCCCCCCHHHHS--TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccchhhHhhC--CCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000001110000 001235677899999999999999999986
No 209
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.95 E-value=4.3e-28 Score=246.83 Aligned_cols=219 Identities=15% Similarity=0.161 Sum_probs=157.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcch--h--------------hHhHHHHHHHHHhcCCCceeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--R--------------FKDFESEVEAIARVQHPNIVRL 410 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~--~--------------~~~f~~Ei~~l~~l~HpnIV~l 410 (584)
.+.||+|+||.||+|.. .+ +.||||++....... . .+.|.+|++++++++||||+++
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DN------KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TT------EEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred EEEEcCCCCeEEEEEEc-CC------ceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999998 44 899999997542111 1 1789999999999999999999
Q ss_pred eEEEEeCCceeEeeecccCCcHHH---------------------------------HHhc-cc--ccccCCCCcccccc
Q 007935 411 KAFYYANDEKLLISDFIRNGSLYA---------------------------------ALHG-FG--LNRLLPGTSKVTKN 454 (584)
Q Consensus 411 ~g~~~~~~~~~lV~Ey~~~GsL~~---------------------------------~L~~-~g--~~~~~~~~~~i~~~ 454 (584)
++++.+.+..++||||+++|+|.+ |||+ .| |.++.+.|+.+..+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 999999999999999999998744 4454 44 56777788877777
Q ss_pred CeEEecCCCccc---------ccCCCcccCccccccCCCCCC-ccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 455 ETIVTSGTGSRI---------SAISNVYLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 455 ~~~~~~~~~~~~---------~~gt~~y~aPE~~~~~~~~~~-ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
..++..+++... ..||..|+|||++..+..++. ++|||||||++|||+||+.||...... ......
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~ 264 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL----VELFNN 264 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----HHHHHH
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHH
Confidence 788888776432 368899999999655335666 999999999999999999999753321 333333
Q ss_pred HhhcCCCCccccC----hhhhh--hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 525 AFRERRPLSEVID----PALVK--EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 525 ~~~~~~~~~~~~d----~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........+.... +.... ..........+.+++.+||+.||.+|||+.|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3333222221000 00000 0000111235567888899999999999999986
No 210
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.95 E-value=4.3e-28 Score=242.44 Aligned_cols=220 Identities=17% Similarity=0.188 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC----cchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCC-
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYAND- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~- 418 (584)
.+.||+|+||+||+|+...++ +.||||+++... .......+.+|++++++++ |||||+++++|....
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSG-----HFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTC-----CEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 467999999999999987665 899999987432 1112356788888887774 999999999998765
Q ss_pred ----ceeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCcc
Q 007935 419 ----EKLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 419 ----~~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
..++||||+. |+|.+++. .. -|++++++|+.+..++.++..|+|..
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4799999997 58866553 33 46888899988888888888888743
Q ss_pred c----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCcc
Q 007935 466 I----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSE 534 (584)
Q Consensus 466 ~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 534 (584)
. ..||+.|+|||++.. ..++.++|||||||++|||+||+.||.+.... ..+..+....... ....+.
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcccCCccccccccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccc
Confidence 2 368999999999654 67999999999999999999999999753211 1111111111000 000000
Q ss_pred cc-------C----hhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VI-------D----PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~-------d----~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. . ...... ..+....+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSV--VPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHH--SCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHh--CccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0 000000 0011235677899999999999999999985
No 211
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.95 E-value=7.4e-28 Score=246.61 Aligned_cols=222 Identities=16% Similarity=0.228 Sum_probs=158.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Ccee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~~ 421 (584)
.+.||+|+||.||+|+...++ +.||||++.........+.+.+|++++++++|||||++++++... ...+
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNK-----VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred EEEeecCCCeEEEEEEECCCC-----eEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 467999999999999987765 899999998654444457899999999999999999999999765 3689
Q ss_pred EeeecccCCcHHHHH------------------------hccc--ccccCCCCccccccCeEEecCCCccc---------
Q 007935 422 LISDFIRNGSLYAAL------------------------HGFG--LNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+||||++ |+|.+++ |..| |+++++.|+.+..+..++..|+|...
T Consensus 107 iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 185 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185 (364)
T ss_dssp EEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred EEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence 9999998 4886554 4333 67888888888877788888876432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--CccccChh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPA 539 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~d~~ 539 (584)
..||+.|+|||++..+..++.++|||||||++|||+||+.||.+..... .+..+. ........ +....+..
T Consensus 186 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~-~~~~~~~~~~~~~~~~~~ 263 (364)
T 3qyz_A 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHIL-GILGSPSQEDLNCIINLK 263 (364)
T ss_dssp CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHH-HHHCSCCHHHHHTCCCHH
T ss_pred ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHH-HHhCCCCHHHHHHhhhhh
Confidence 2689999999986665668999999999999999999999997533211 111111 11110000 00000000
Q ss_pred hhhh-------------hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKE-------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~-------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.... .........+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000001235678899999999999999999985
No 212
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=5.8e-28 Score=240.62 Aligned_cols=207 Identities=21% Similarity=0.285 Sum_probs=150.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA---------- 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~---------- 416 (584)
.+.||+|+||.||+|+...++ +.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDS-----RYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred hheeccCCcEEEEEEEEcCCC-----eEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 468999999999999987655 89999999653 2334789999999999999999999999876
Q ss_pred ---CCceeEeeecccCCcHHHHHhc--------------------------c--cccccCCCCccccccCeEEecCCCcc
Q 007935 417 ---NDEKLLISDFIRNGSLYAALHG--------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSR 465 (584)
Q Consensus 417 ---~~~~~lV~Ey~~~GsL~~~L~~--------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 465 (584)
.+..++||||+++|+|.++++. . .|+++.+.|+.+..++.++..+++..
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3568999999999999877642 2 35677778877777777777777633
Q ss_pred c-------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHH
Q 007935 466 I-------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 520 (584)
Q Consensus 466 ~-------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~ 520 (584)
. ..||..|+|||++.....++.++|||||||++|||++ ||.. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~----~~~~~~ 236 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST----GMERVN 236 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS----HHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC----chhHHH
Confidence 2 2478889999986544478999999999999999998 5532 111222
Q ss_pred HHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 521 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 521 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...........++..++... ...+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCCCCTTCCTTT---------SHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccccCccccccc---------hHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 23332222222222222221 123456888899999999999999986
No 213
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.6e-28 Score=247.16 Aligned_cols=222 Identities=16% Similarity=0.212 Sum_probs=154.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~l 422 (584)
.+.||+|+||.||+|+...++ +.||||++...... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTN-----QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCC-----SEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred EeEEeecCCEEEEEEEECCCC-----cEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 467999999999999987765 79999999754211 123578899999999999999999999999999999
Q ss_pred eeecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 423 ISDFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 423 V~Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
||||+++ +|.+++ |+. .|++++++|+.+..++.++..|+|...
T Consensus 90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 9999986 775444 443 367788888888778888888876432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCCCccccC-----
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVID----- 537 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d----- 537 (584)
..||+.|+|||++.....++.++|||||||++|||++|.+||.+... ...+.......... ....++...
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYV 247 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence 36789999999865545689999999999999999999999875321 11111111111100 000000000
Q ss_pred -----hhhh-hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 538 -----PALV-KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 538 -----~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+... ... .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 248 TFKSFPGIPLHHI-FSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCCCCCCCHHHH-CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCChHHh-hccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 000 0011245678899999999999999999985
No 214
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=3.6e-28 Score=246.16 Aligned_cols=220 Identities=22% Similarity=0.247 Sum_probs=152.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHH--HHhcCCCceeeeeEEEEeC-----Cc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA--IARVQHPNIVRLKAFYYAN-----DE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~--l~~l~HpnIV~l~g~~~~~-----~~ 419 (584)
.+.||+|+||.||+|+.. + +.||||++..... +.+..|.++ +..++||||+++++++... ..
T Consensus 18 ~~~lg~G~~g~Vy~~~~~-~------~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSLD-E------RPVAVKVFSFANR----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp EEEEEECSSEEEEEEEET-T------EEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred eeecccCCCeEEEEEEEC-C------eEEEEEEeeccch----hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 467999999999999773 2 7999999975322 445555555 4458999999999876542 25
Q ss_pred eeEeeecccCCcHHHHH------------------------hcc-----------cccccCCCCccccccCeEEecCCCc
Q 007935 420 KLLISDFIRNGSLYAAL------------------------HGF-----------GLNRLLPGTSKVTKNETIVTSGTGS 464 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L------------------------~~~-----------g~~~~~~~~~~i~~~~~~~~~~~~~ 464 (584)
.++||||+++|+|.+++ |.. .|+++++.|+.+..++.++..|||.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 68999999999996554 533 4677888888888778888888875
Q ss_pred cc-------------------ccCCCcccCccccccC------CCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC---
Q 007935 465 RI-------------------SAISNVYLAPEARIYG------SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK--- 516 (584)
Q Consensus 465 ~~-------------------~~gt~~y~aPE~~~~~------~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~--- 516 (584)
.. ..||..|+|||++... ..++.++|||||||++|||+||+.||........
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 42 2589999999985431 3566799999999999999999877643222111
Q ss_pred ----------cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 517 ----------GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 517 ----------~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
....+......... ...+.+.... .......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQ--RPKFPEAWKE---NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCC--CCCCCTTCCC---CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhcccCCCchHHHHHhhhccccc--CCCCCccccc---ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 01111111111110 1111111110 1123346788999999999999999999999999875
No 215
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=6.7e-28 Score=252.44 Aligned_cols=157 Identities=18% Similarity=0.297 Sum_probs=128.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ......+++.+|+++|++++|||||++++++... +..
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTE-----KNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred EEEEeecCCEEEEEEEECCCC-----cEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 468999999999999988776 89999999765 2333457899999999999999999999999876 568
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCcc--------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR-------- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~-------- 465 (584)
|+||||++ |+|.+++ |.. -|+++++.|+.+..+..++..|||..
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred EEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 99999997 5886554 333 36888889988888888888777633
Q ss_pred -------------------------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 466 -------------------------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 466 -------------------------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
...||+.|+|||++..+..++.++||||+||++|||++|..||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 23679999999986566779999999999999999998655543
No 216
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.95 E-value=3.3e-28 Score=248.86 Aligned_cols=222 Identities=18% Similarity=0.251 Sum_probs=145.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------- 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------- 419 (584)
.+.||+|+||.||+|+...++ +.||||++..... ..+.+.+|++.+++++|||||++++++...+.
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTG-----MSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp C----------CEEEEETTTC-----CEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred EEEEecCCCeEEEEEEECCCC-----CEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 467999999999999987765 8999999876432 22567889999999999999999999987544
Q ss_pred eeEeeecccCCcH----------------------------HHHHh--ccc--ccccCCCCccccc-cCeEEecCCCccc
Q 007935 420 KLLISDFIRNGSL----------------------------YAALH--GFG--LNRLLPGTSKVTK-NETIVTSGTGSRI 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------------~~~L~--~~g--~~~~~~~~~~i~~-~~~~~~~~~~~~~ 466 (584)
.++||||++++.+ ..+|| ..| |+++++.|+.+.. +..++..|||...
T Consensus 101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 7899999987522 14456 443 6778888888875 6778888887432
Q ss_pred ----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC----
Q 007935 467 ----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL---- 532 (584)
Q Consensus 467 ----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~---- 532 (584)
..||+.|+|||++.....++.++|||||||++|||+||+.||.+.... ..+..+.+.........
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHH
T ss_pred ecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCCCCHHHHHhc
Confidence 367899999998655456899999999999999999999999753211 11111111110000000
Q ss_pred ------ccccC---hhhhhhh--hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 533 ------SEVID---PALVKEI--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 533 ------~~~~d---~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+ ....... ........+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 0000000 00012346788999999999999999999985
No 217
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=4.6e-28 Score=256.00 Aligned_cols=152 Identities=18% Similarity=0.308 Sum_probs=115.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-CcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Cce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||++... ......+++.+|+++|++++|||||++++++... +..
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEK-----RVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp CCC-------CEEEEEECC-------CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred eeEeeecCCeEEEEEEECCCC-----cEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 467999999999999987765 89999999764 2333457899999999999999999999999543 568
Q ss_pred eEeeecccCCcHHHHH-------------------------hcc--cccccCCCCccccccCeEEecCCCccc-------
Q 007935 421 LLISDFIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI------- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~------- 466 (584)
|+||||+. |+|.+++ |.. .|+|++++|+.+..+..++..|||...
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 99999985 6775444 443 468889999888888888888887432
Q ss_pred -------------------------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhC
Q 007935 467 -------------------------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 504 (584)
Q Consensus 467 -------------------------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG 504 (584)
.+||+.|+|||++..+..|+.++|||||||++|||+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 25699999999865656799999999999999999993
No 218
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95 E-value=8.4e-28 Score=248.58 Aligned_cols=218 Identities=20% Similarity=0.308 Sum_probs=152.1
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
..++||+|+||.||+|+...+ ..||+|++..... ...+|++++++++|||||++++++...+.
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~------~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVES------DEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTT------EEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred EeEEEeeCCCeEEEEEEECCC------CeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 356899999999999998877 5699998865322 23479999999999999999999976544
Q ss_pred eeEeeecccCCcH----------------------------HHHHhccc--ccccCCCCcccc-ccCeEEecCCCccc--
Q 007935 420 KLLISDFIRNGSL----------------------------YAALHGFG--LNRLLPGTSKVT-KNETIVTSGTGSRI-- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL----------------------------~~~L~~~g--~~~~~~~~~~i~-~~~~~~~~~~~~~~-- 466 (584)
.++||||++++.+ ..|||..| |+++++.|+.+. .++.++..|||...
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 7899999987543 24455554 678888888887 56778888887542
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh-----------
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR----------- 527 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~----------- 527 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||.+.... ..+..+....-.
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCG
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhCh
Confidence 367889999998655456999999999999999999999999753211 111111111000
Q ss_pred c--CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 528 E--RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 528 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...++..-...+... ........+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKV-FRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp GGSSSCCCCCCCCCHHHH-SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhccccccCCcHHHh-ccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0 000001000000000 00011235678899999999999999999985
No 219
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=9.2e-28 Score=244.87 Aligned_cols=222 Identities=18% Similarity=0.231 Sum_probs=157.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeC-----Ccee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~-----~~~~ 421 (584)
.+.||+|+||.||+|+....+ +.||||++...........+.+|++++++++||||+++++++... ...+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTG-----EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred eeEEcCCCCeEEEEEEECCCC-----cEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 467999999999999988665 899999997654444457889999999999999999999998764 6789
Q ss_pred EeeecccCCcHHHHH------------------------hcc--cccccCCCCccccccCeEEecCCCccc---------
Q 007935 422 LISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRI--------- 466 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~--------- 466 (584)
+||||++ |+|.+++ |+. .|+++++.|+.+..+..++..++|...
T Consensus 91 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 169 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169 (353)
T ss_dssp EEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence 9999997 5886544 443 367788888888777778887776432
Q ss_pred ------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC---C
Q 007935 467 ------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR---P 531 (584)
Q Consensus 467 ------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~---~ 531 (584)
..||..|+|||++..+..++.++|||||||++|||++|+.||.+.... .....+........ .
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 247 (353)
T 2b9h_A 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--HQLLLIFGIIGTPHSDND 247 (353)
T ss_dssp ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCSTTT
T ss_pred cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCchhcc
Confidence 257889999998665567899999999999999999999999753211 01111111111000 0
Q ss_pred CccccChhhhhhhh-------------HHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIH-------------AKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~-------------~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....++....... .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000010000000 0011235678899999999999999999985
No 220
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=242.23 Aligned_cols=217 Identities=20% Similarity=0.262 Sum_probs=156.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~------ 419 (584)
.+.||+|+||.||+|.....+ +.||||++.... .....+.+.+|+.++++++|||||++++++...+.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSG-----EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eeeEecCCCeEEEEEEECCCC-----CEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 467999999999999987765 899999997652 23334788999999999999999999999987654
Q ss_pred eeEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCccc--------
Q 007935 420 KLLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
.++||||++ |+|. .|||..| |+++.+.|+.+..++.++..++|...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 182 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 182 (353)
T ss_dssp CEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred EEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccc
Confidence 499999997 5763 4556554 67788888888777888888887542
Q ss_pred ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc-CCC--------------
Q 007935 467 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE-RRP-------------- 531 (584)
Q Consensus 467 ~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~-~~~-------------- 531 (584)
..||..|+|||++.....++.++|||||||++|||+||+.||.+... .......... ..+
T Consensus 183 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp -CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-----HHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 36899999999865546789999999999999999999999975321 1111111110 000
Q ss_pred -----CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 -----LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 -----~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
++....+.+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLF--PRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTSCBCSSCCTTTTC--TTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCcCCCCccHHHhc--CCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000000 011235667888899999999999999985
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95 E-value=7.1e-28 Score=251.22 Aligned_cols=217 Identities=22% Similarity=0.344 Sum_probs=149.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC------ce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------EK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~------~~ 420 (584)
.++||+|+||.||+|+....+ +.||||++.... +.+.+|++++++++|||||+++++|...+ ..
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~-----~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSG-----ELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTC-----CEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCC-----cEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 468999999999999997765 899999997532 23457999999999999999999986532 26
Q ss_pred eEeeecccCCcHH-----------------------------HHHhccc--ccccCCCCcccccc-CeEEecCCCccc--
Q 007935 421 LLISDFIRNGSLY-----------------------------AALHGFG--LNRLLPGTSKVTKN-ETIVTSGTGSRI-- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~-----------------------------~~L~~~g--~~~~~~~~~~i~~~-~~~~~~~~~~~~-- 466 (584)
++||||+++ +|. .|||..| |+++++.|+.+..+ ..++..|||...
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 799999986 432 3455544 67888888887754 456777877432
Q ss_pred --------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-------h-cC-
Q 007935 467 --------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-------R-ER- 529 (584)
Q Consensus 467 --------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~-------~-~~- 529 (584)
..||+.|+|||++.....++.++|||||||++|||++|+.||.+.... ..+..++...- . ..
T Consensus 208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHHHHCS
T ss_pred ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhCh
Confidence 368999999998655457999999999999999999999999753211 11222221100 0 00
Q ss_pred ----CCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 530 ----RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 530 ----~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..++......+.... .......+.+|+.+||+.||++|||+.|+++
T Consensus 287 ~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 287 NYTEFKFPQIKAHPWTKVF-RPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCCCHHHHS-CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhccCccCCCCHHHhc-CCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000110000000000 0011235678899999999999999999985
No 222
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.95 E-value=2e-27 Score=239.52 Aligned_cols=205 Identities=17% Similarity=0.233 Sum_probs=152.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEe------CCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA------NDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~------~~~ 419 (584)
.+.||+|+||.||+|+....+ +.||||++...... .+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred EEEeccCCCEEEEEEEECCCC-----CeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 468999999999999987665 79999999764332 37899999999999 89999999999987 467
Q ss_pred eeEeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccccCeEEecCCCccc----
Q 007935 420 KLLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKNETIVTSGTGSRI---- 466 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---- 466 (584)
.++||||+++|+|.+++.. . .|.++.+.|+.+..++.++..+++...
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 8999999999999777642 2 356777788877777778888876432
Q ss_pred -------ccCCCcccCcccccc----CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC--Cc
Q 007935 467 -------SAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP--LS 533 (584)
Q Consensus 467 -------~~gt~~y~aPE~~~~----~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~ 533 (584)
..||..|+|||++.. +..++.++|||||||++|||+||+.||.... .............+ ..
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 256 (326)
T 2x7f_A 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFLIPRNPAPRLKS 256 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSC
T ss_pred CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCccccCCc
Confidence 358899999998642 3568999999999999999999999997422 11222222222111 11
Q ss_pred cccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 534 EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 534 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
..+++ .+.+++.+||+.||.+|||+.|+++
T Consensus 257 ~~~~~-------------~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 257 KKWSK-------------KFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCSCH-------------HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccCH-------------HHHHHHHHHhccChhhCCCHHHHhh
Confidence 22222 3445777899999999999999986
No 223
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=3.1e-27 Score=233.72 Aligned_cols=210 Identities=20% Similarity=0.312 Sum_probs=157.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++.... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQ-----QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEcCCCCEEEEEEEEcCCC-----cEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 468999999999999987655 799999997642 23345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-------------------------hcc--cccccCCCCcccccc---CeEEecCCCccc---------
Q 007935 426 FIRNGSLYAAL-------------------------HGF--GLNRLLPGTSKVTKN---ETIVTSGTGSRI--------- 466 (584)
Q Consensus 426 y~~~GsL~~~L-------------------------~~~--g~~~~~~~~~~i~~~---~~~~~~~~~~~~--------- 466 (584)
|+++++|.+++ |.. -|.++.+.|+.+..+ ..++..+++...
T Consensus 102 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~ 181 (287)
T 2wei_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181 (287)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCS
T ss_pred ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccc
Confidence 99999996655 333 356677777766443 246677776432
Q ss_pred -ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cccChhhh
Q 007935 467 -SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EVIDPALV 541 (584)
Q Consensus 467 -~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~d~~~~ 541 (584)
..||..|+|||++ .+ .++.++||||||+++|||++|+.||... ................. ..+++
T Consensus 182 ~~~~~~~y~aPE~~-~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 251 (287)
T 2wei_A 182 DRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVETGKYAFDLPQWRTISD--- 251 (287)
T ss_dssp CHHHHHTTCCHHHH-TT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCCCSGGGTTSCH---
T ss_pred cccCcccccChHHh-cC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCchhhhhcCH---
Confidence 2467789999984 43 5899999999999999999999999752 22333333333222111 11222
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhh
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRV 581 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i 581 (584)
.+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 252 ----------~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 252 ----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp ----------HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred ----------HHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 3556888899999999999999986 45544
No 224
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.95 E-value=3.3e-28 Score=240.26 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=148.3
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
+.||+|+||.||+|+....+ +.||||.+..... ....+.|.+|+.++++++|||||++++++.+++..|+|||
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALD-----RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTT-----EEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEcccCCeEEEEEEecCCC-----ceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 57999999999999998755 8999999986532 3345789999999999999999999999999999999999
Q ss_pred cccCCcHHHHH-----------------------hcc--cccccCCCCccccccCeEEecCCCcccccCCCcccCccccc
Q 007935 426 FIRNGSLYAAL-----------------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 480 (584)
Q Consensus 426 y~~~GsL~~~L-----------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 480 (584)
|+++|+|.+++ |+. -|++++++|+.+..++.++.. +..|++|
T Consensus 112 ~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~---------~~~~~~~---- 178 (286)
T 3uqc_A 112 WIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLA---------YPATMPD---- 178 (286)
T ss_dssp CCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEEC---------SCCCCTT----
T ss_pred ecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEE---------eccccCC----
Confidence 99999997665 333 367778888777666655543 3346654
Q ss_pred cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcc
Q 007935 481 YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNC 560 (584)
Q Consensus 481 ~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~C 560 (584)
++.++|||||||++|||+||+.||.+......... ................+.+ ...+.+++.+|
T Consensus 179 ----~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~l~~li~~~ 243 (286)
T 3uqc_A 179 ----ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQPIEPADIDRDI---------PFQISAVAARS 243 (286)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSCBCCHHHHCTTS---------CHHHHHHHHHH
T ss_pred ----CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccCCCChhhcccCC---------CHHHHHHHHHH
Confidence 68899999999999999999999986433210000 0000000000000111111 12456688889
Q ss_pred cCCCCCCCCChHHHHHHHHhhhc
Q 007935 561 TELDPEFRPRMRTVSESLDRVKL 583 (584)
Q Consensus 561 l~~~P~~RPt~~ev~~~L~~i~~ 583 (584)
|+.||++| |+.|+++.|+++..
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC
T ss_pred cccCCccC-CHHHHHHHHHHHhc
Confidence 99999999 99999999998753
No 225
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.95 E-value=1.4e-28 Score=253.16 Aligned_cols=206 Identities=13% Similarity=0.119 Sum_probs=150.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCC--CcchhhHhHHHHH---HHHHhcCCCceeeee-------EEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEV---EAIARVQHPNIVRLK-------AFY 414 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~f~~Ei---~~l~~l~HpnIV~l~-------g~~ 414 (584)
.+.||+|+||.||+|+...++ +.||||++... ......+.|.+|+ +++++++|||||+++ +++
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETG-----ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCC-----CEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred cceeecCCCEEEEEEEECCCC-----cEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 468999999999999986654 89999999753 2233457899999 556666899999998 776
Q ss_pred EeCCc-----------------eeEeeecccCCcHHHHHhc--------------------------------c--cccc
Q 007935 415 YANDE-----------------KLLISDFIRNGSLYAALHG--------------------------------F--GLNR 443 (584)
Q Consensus 415 ~~~~~-----------------~~lV~Ey~~~GsL~~~L~~--------------------------------~--g~~~ 443 (584)
.+.+. .++||||+ +|+|.++++. . -|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 65543 88999999 6899777642 1 4688
Q ss_pred cCCCCccccccCeEEecCCCccc--------ccCCCcccCccccccC----------CCCCCccchhhHHHHHHHHHhCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSRI--------SAISNVYLAPEARIYG----------SKFTQKCDVYSFGIVLLEILTGR 505 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~~--------~~gt~~y~aPE~~~~~----------~~~~~ksDV~SfGvvl~ElltG~ 505 (584)
++++|+.+..++.++..|||... ..| +.|+|||++... ..++.++|||||||++|||+||+
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 88899988888888888887542 356 899999996542 17899999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH--HHHhh
Q 007935 506 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE--SLDRV 581 (584)
Q Consensus 506 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~i 581 (584)
.||........ . ..... ....+++ .+.+++.+||+.||++|||+.|+++ .++++
T Consensus 311 ~Pf~~~~~~~~-~----~~~~~----~~~~~~~-------------~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 311 LPITKDAALGG-S----EWIFR----SCKNIPQ-------------PVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp CCC------CC-S----GGGGS----SCCCCCH-------------HHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred CCCcccccccc-h----hhhhh----hccCCCH-------------HHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 99975332110 0 00000 0112222 3456778899999999999999985 44444
No 226
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.95 E-value=2.2e-27 Score=248.17 Aligned_cols=156 Identities=19% Similarity=0.251 Sum_probs=129.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc------CCCceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV------QHPNIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l------~HpnIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|.....+ +.||||+++... ...+.+.+|++++..+ +|+||+++++++...+..
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~-----~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVH-----QHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTT-----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEcccCccEEEEEEEECCCC-----cEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 468999999999999988765 899999997642 2336788899998887 577999999999999999
Q ss_pred eEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCe--EEecCCCcc----
Q 007935 421 LLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNET--IVTSGTGSR---- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~--~~~~~~~~~---- 465 (584)
++||||++ |+|.+++. .. .|+++++.|+.+..++. ++..|||..
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99999996 58865553 32 36888888888877765 778888753
Q ss_pred ----cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 007935 466 ----ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 511 (584)
Q Consensus 466 ----~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~ 511 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+.
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcccccCCCCCccChHHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2468999999999554 68999999999999999999999999753
No 227
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.95 E-value=8.3e-28 Score=246.37 Aligned_cols=208 Identities=10% Similarity=0.118 Sum_probs=154.4
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||+|...........+.||||+++... ..++.+|++++.+++ |+||+++++++...+..++|
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv 145 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence 46899999999999965433222333899999997642 267889999999987 99999999999999999999
Q ss_pred eecccCCcHHHHHhc------------------------------c--cccccCCCCccccc-----------cCeEEec
Q 007935 424 SDFIRNGSLYAALHG------------------------------F--GLNRLLPGTSKVTK-----------NETIVTS 460 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~~------------------------------~--g~~~~~~~~~~i~~-----------~~~~~~~ 460 (584)
||||++|+|.++++. . .|+|++++|+.+.. +..++..
T Consensus 146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 999999999877742 2 36888888888876 6778888
Q ss_pred CCCccc-------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhh
Q 007935 461 GTGSRI-------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 527 (584)
Q Consensus 461 ~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~ 527 (584)
|||... ..||..|||||++.. ..++.++|||||||++|||+||+.||........ .
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------~ 294 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------K 294 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE----------E
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCce----------e
Confidence 887541 358999999999554 6799999999999999999999999864322110 0
Q ss_pred cCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCC-CChHHHHHHHHhh
Q 007935 528 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFR-PRMRTVSESLDRV 581 (584)
Q Consensus 528 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Pt~~ev~~~L~~i 581 (584)
....+.....+ ....++...|++.+|.+| |++.++.+.|+++
T Consensus 295 ~~~~~~~~~~~------------~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 295 PEGLFRRLPHL------------DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ECSCCTTCSSH------------HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred echhccccCcH------------HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 01111111111 123346667999999998 6888888888765
No 228
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=237.97 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=149.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEE-----------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY----------- 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~----------- 415 (584)
.+.||+|+||.||+|.....+ +.||||++.... ....+++.+|++++++++|||||++++++.
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCD-----KRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp EEECC-----CEEEEEETTTT-----EEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred EEEeccCCCeEEEEEEECCCC-----eEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999998765 899999997643 334578999999999999999999999874
Q ss_pred ---eCCceeEeeecccCCcHHHHH------------------------hcc--cccccCCCCcccc-ccCeEEecCCCcc
Q 007935 416 ---ANDEKLLISDFIRNGSLYAAL------------------------HGF--GLNRLLPGTSKVT-KNETIVTSGTGSR 465 (584)
Q Consensus 416 ---~~~~~~lV~Ey~~~GsL~~~L------------------------~~~--g~~~~~~~~~~i~-~~~~~~~~~~~~~ 465 (584)
+.+..++||||++ |+|.+++ |+. -|+++++.|+.+. .+..++..++|..
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~ 168 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence 3467899999998 6886554 333 3577777887775 3456777777643
Q ss_pred c--------------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCC
Q 007935 466 I--------------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 531 (584)
Q Consensus 466 ~--------------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 531 (584)
. ..+|..|+|||.+.....++.++|||||||++|||+||+.||.+.. ..............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-----ELEQMQLILESIPV 243 (320)
T ss_dssp BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHSCC
T ss_pred cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCC
Confidence 2 2468889999986655678999999999999999999999997532 11222222211110
Q ss_pred CccccChhh--------hhhh---------hHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPAL--------VKEI---------HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~--------~~~~---------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
......+++ .... ........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000000000 0000 00011245678999999999999999999985
No 229
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.95 E-value=1.5e-27 Score=247.25 Aligned_cols=221 Identities=15% Similarity=0.144 Sum_probs=155.5
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC--------CCceeeeeEEEE---
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ--------HPNIVRLKAFYY--- 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~--------HpnIV~l~g~~~--- 415 (584)
.+.||+|+||.||+|+...++ +.||||+++.. ....+.+.+|++++++++ |||||++++++.
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGK-----KFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCC-----eEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 467999999999999987765 89999999754 223478999999999995 788999999998
Q ss_pred -eCCceeEeeecccCCcHH---------------------------HHHhcc-c--ccccCCCCccccccC---------
Q 007935 416 -ANDEKLLISDFIRNGSLY---------------------------AALHGF-G--LNRLLPGTSKVTKNE--------- 455 (584)
Q Consensus 416 -~~~~~~lV~Ey~~~GsL~---------------------------~~L~~~-g--~~~~~~~~~~i~~~~--------- 455 (584)
+....++||||+ +|+|. .|||.. | |+++++.|+.+..++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 456799999999 45553 445554 4 677888887776443
Q ss_pred ----------------------------------------eEEecCCCcc--------cccCCCcccCccccccCCCCCC
Q 007935 456 ----------------------------------------TIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQ 487 (584)
Q Consensus 456 ----------------------------------------~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ 487 (584)
.++..++|.. ...||..|+|||++.. ..++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ 272 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIG-SGYNT 272 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHT-SCCCT
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcC-CCCCc
Confidence 5666777643 2468999999999654 67999
Q ss_pred ccchhhHHHHHHHHHhCCCCCCCCCCCCCc-HHHHHHHHhh--cCCC---------Ccccc-------------Chhhhh
Q 007935 488 KCDVYSFGIVLLEILTGRLPDAGPENDGKG-LESLVRKAFR--ERRP---------LSEVI-------------DPALVK 542 (584)
Q Consensus 488 ksDV~SfGvvl~ElltG~~p~~~~~~~~~~-l~~~~~~~~~--~~~~---------~~~~~-------------d~~~~~ 542 (584)
++|||||||++|||+||+.||......... -......... ...+ ....+ ...+..
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999999999865433211 1111111110 0000 00000 000000
Q ss_pred h-----hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 543 E-----IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 543 ~-----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. .........+.+++.+||+.||++|||+.|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 011334567889999999999999999999985
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=3e-27 Score=243.81 Aligned_cols=217 Identities=18% Similarity=0.279 Sum_probs=149.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCC--------
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-------- 418 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~-------- 418 (584)
.+.||+|+||.||+|+...++ +.||||++.... +.+.+|++++++++|||||++++++...+
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~-----~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESG-----KRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTC-----CEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred EEEEEeccCEEEEEEEECCCC-----CEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 468999999999999987765 899999997542 22347999999999999999999995532
Q ss_pred ------------------------------ceeEeeecccCCcHHHH-----------------------------Hhcc
Q 007935 419 ------------------------------EKLLISDFIRNGSLYAA-----------------------------LHGF 439 (584)
Q Consensus 419 ------------------------------~~~lV~Ey~~~GsL~~~-----------------------------L~~~ 439 (584)
..++||||+++ +|.+. ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 37899999984 76443 3444
Q ss_pred c--ccccCCCCcccc-ccCeEEecCCCccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 440 G--LNRLLPGTSKVT-KNETIVTSGTGSRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 440 g--~~~~~~~~~~i~-~~~~~~~~~~~~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
| |+++++.|+.+. .+..++..|+|... ..||+.|+|||++.....++.++||||+||++|||++|+.
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 3 677888888776 46777888877442 3678899999986654568999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHhh--------c-----CCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHH
Q 007935 507 PDAGPENDGKGLESLVRKAFR--------E-----RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 573 (584)
Q Consensus 507 p~~~~~~~~~~l~~~~~~~~~--------~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 573 (584)
||.+.... ..+..++...-. . ...++......... .........+.+++.+||+.||++|||+.|
T Consensus 241 pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 241 LFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK-ILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH-HSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh-hCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 99753211 111111111000 0 00001111111110 000112235678899999999999999999
Q ss_pred HHH
Q 007935 574 VSE 576 (584)
Q Consensus 574 v~~ 576 (584)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 984
No 231
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=1.5e-27 Score=240.62 Aligned_cols=211 Identities=18% Similarity=0.250 Sum_probs=138.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHH-HHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||+++........+++.+|+. +++.++|||||++++++.+++..++|||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSG-----QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTT-----EEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hheeccCCCEEEEEEEEcCCC-----CEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 457999999999999987665 8999999987644444466777777 6777899999999999999999999999
Q ss_pred cccCCcHHH------------------------------HHhcc---cccccCCCCccccccCeEEecCCCccc------
Q 007935 426 FIRNGSLYA------------------------------ALHGF---GLNRLLPGTSKVTKNETIVTSGTGSRI------ 466 (584)
Q Consensus 426 y~~~GsL~~------------------------------~L~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~------ 466 (584)
|+++ +|.+ +||.. -|+++.+.|+.+..++.++..++|...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 9986 6543 33433 367778888888777888888887432
Q ss_pred ----ccCCCcccCccccc---cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC-CCccccCh
Q 007935 467 ----SAISNVYLAPEARI---YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDP 538 (584)
Q Consensus 467 ----~~gt~~y~aPE~~~---~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~ 538 (584)
..||..|+|||++. .+..++.++|||||||++|||+||+.||...... ............ .+.....+
T Consensus 181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3aln_A 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQVVKGDPPQLSNSEER 256 (327)
T ss_dssp -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCCCCCCCSSC
T ss_pred ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHHHhcCCCCCCCCcccc
Confidence 26889999999863 3456899999999999999999999999753211 111111111111 01110000
Q ss_pred hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 539 ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 539 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.. ...+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~---------~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 257 EF---------SPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC---------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cC---------CHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 124556888899999999999999975
No 232
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.95 E-value=4.8e-28 Score=248.69 Aligned_cols=212 Identities=12% Similarity=0.059 Sum_probs=142.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhc--CCCceeeee-------EEE
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV--QHPNIVRLK-------AFY 414 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l--~HpnIV~l~-------g~~ 414 (584)
..+.||+|+||.||+|+...++ +.||||++.... .....+.+.+|+.++..+ +|||||+++ +++
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERL-----EDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTT-----EEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeccCCCCEEEEEEEECCCC-----ceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3578999999999999987665 899999998753 223446788886554444 699988755 555
Q ss_pred EeCC-----------------ceeEeeecccCCcHHHHHhc--------------------------------c--cccc
Q 007935 415 YAND-----------------EKLLISDFIRNGSLYAALHG--------------------------------F--GLNR 443 (584)
Q Consensus 415 ~~~~-----------------~~~lV~Ey~~~GsL~~~L~~--------------------------------~--g~~~ 443 (584)
...+ ..++|||||+ |+|.++++. . -|+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 5433 3799999999 899766642 2 3688
Q ss_pred cCCCCccccccCeEEecCCCcc--------cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCCCCCCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSR--------ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 514 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~ 514 (584)
++++|+.+..++.++..|||.. ...+|+.|+|||++..+ ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 8889988888888888888753 34677899999995431 47899999999999999999999999865332
Q ss_pred CCcHHHHHHHHh--hcCCCC--ccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 515 GKGLESLVRKAF--RERRPL--SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 515 ~~~l~~~~~~~~--~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
............ ...... ...++ ..+.+++.+||+.||++|||+.|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLP-------------DFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCC-------------HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccccchhhccCCC-------------HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 110000000000 000000 01112 24556888899999999999999974
No 233
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.94 E-value=6.7e-27 Score=246.77 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=158.3
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC-CceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H-pnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|+....+ +.||||++...... +++.+|++++..++| ++|+.+..++.+.+..++|||
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~-----~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTN-----EEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTC-----CEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCC-----cEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 457999999999999987655 89999988764332 568999999999976 566666677777888999999
Q ss_pred cccCCcHHHHHh--------------------------cc--cccccCCCCccc---cccCeEEecCCCcc---------
Q 007935 426 FIRNGSLYAALH--------------------------GF--GLNRLLPGTSKV---TKNETIVTSGTGSR--------- 465 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i---~~~~~~~~~~~~~~--------- 465 (584)
|+ +|+|.++++ .. .|+++++.|+.+ ..+..++..|||..
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99 999976664 22 468888888887 45577777777643
Q ss_pred ---------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcccc
Q 007935 466 ---------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 536 (584)
Q Consensus 466 ---------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (584)
...||..|+|||++. +..++.++|||||||++|||++|+.||.+.... .............. ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~i~~~~~--~~~~ 237 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEKKV--ATSI 237 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SHHHHHHHHHHHHH--HSCH
T ss_pred cccccccccccCCCccccCHHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccch--hHHHHHHHHhhccc--cccH
Confidence 346899999999955 468999999999999999999999999864332 12222211111100 0000
Q ss_pred ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHHHHHhhh
Q 007935 537 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 582 (584)
Q Consensus 537 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~i~ 582 (584)
+.+.. ....++.+++..||+.||++||++.+|++.|+++.
T Consensus 238 -~~l~~-----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 -EALCR-----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp -HHHHT-----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred -HHHhc-----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 00000 11235677888899999999999999999998873
No 234
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94 E-value=3.5e-27 Score=241.50 Aligned_cols=216 Identities=19% Similarity=0.265 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc----------hhhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----------WRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~----------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
.+.||+|+||.||+|....+ ..||||++...... ...+.+.+|++++++++|||||++++++..
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEG------IPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp EEEEEEETTEEEEEEECTTS------CEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred eEEeccCCCEEEEEEECCCC------CeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 46899999999999998775 79999999654221 113679999999999999999999999965
Q ss_pred CC-----ceeEeeecccCCcHHHHH--------------------------hcc--cccccCCCCccccccCeEEecCCC
Q 007935 417 ND-----EKLLISDFIRNGSLYAAL--------------------------HGF--GLNRLLPGTSKVTKNETIVTSGTG 463 (584)
Q Consensus 417 ~~-----~~~lV~Ey~~~GsL~~~L--------------------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~ 463 (584)
.+ ..++||||++ |+|.+++ |.. -|+++++.|+.+..+..++..++|
T Consensus 101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecC
Confidence 33 4799999998 5775544 433 367788888888777888888887
Q ss_pred ccc----------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhc--CCC
Q 007935 464 SRI----------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE--RRP 531 (584)
Q Consensus 464 ~~~----------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~--~~~ 531 (584)
... ..||+.|+|||++.....++.++|||||||++|||+||+.||.+.. ........... ...
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~ 254 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-----FYNQLNKIVEVVGTPK 254 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCC
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCC
Confidence 542 3678899999986654678999999999999999999999997532 11111111110 000
Q ss_pred -------------------CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 -------------------LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 -------------------~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
........... . .......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTA-V-VPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHTSCHHHHHHTTTCCCCCCCCCHHH-H-STTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hHHhhhccchhhhHHHHhhcccCChhhHHh-h-CCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00000000000 0 0011234678899999999999999999985
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.94 E-value=4.3e-27 Score=246.37 Aligned_cols=206 Identities=20% Similarity=0.223 Sum_probs=146.9
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.++||+|+||+||.+....+ +.||||++.... .+.+.+|++++.++ +|||||++++++.+++..++|||
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g------~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQG------RPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp EEEEEECSTTCEEEEEESSS------SEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEeeCCCeEEEEEEEECC------eEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 46899999999987655554 799999987532 25688999999987 89999999999999999999999
Q ss_pred cccCCcHHHHHh--------------------------------cc--cccccCCCCcccccc-------------CeEE
Q 007935 426 FIRNGSLYAALH--------------------------------GF--GLNRLLPGTSKVTKN-------------ETIV 458 (584)
Q Consensus 426 y~~~GsL~~~L~--------------------------------~~--g~~~~~~~~~~i~~~-------------~~~~ 458 (584)
|++ |+|.+++. +. .|+++++.|+.+..+ ..++
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 995 68866653 22 357777777776543 2566
Q ss_pred ecCCCcc---------------cccCCCcccCcccccc------CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCC
Q 007935 459 TSGTGSR---------------ISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 516 (584)
Q Consensus 459 ~~~~~~~---------------~~~gt~~y~aPE~~~~------~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~ 516 (584)
..|+|.. ...||+.|+|||++.. ...++.++|||||||++|||+| |+.||......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-- 246 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-- 246 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--
Confidence 7777632 1368999999998643 2568999999999999999999 99999743211
Q ss_pred cHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 517 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 517 ~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+ .......... +.+ .......++.+++.+||+.||++|||+.||++
T Consensus 247 -~~~i----~~~~~~~~~~--~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -ESNI----IRGIFSLDEM--KCL----HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHH----HHTCCCCCCC--TTC----CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHH----hcCCCCcccc--ccc----ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111 1111111111 000 01122346678999999999999999999975
No 236
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.94 E-value=4.4e-27 Score=236.11 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=142.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHh-HHHHHHHHHhcCCCceeeeeEEEEeCCceeEeee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-f~~Ei~~l~~l~HpnIV~l~g~~~~~~~~~lV~E 425 (584)
.+.||+|+||.||+|.....+ +.||||++..........+ +.++..+++.++||||+++++++.+++..++|||
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTG-----HVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp EEEC------CEEEEEETTTC-----CEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceeeecCCeeEEEEEEecCC-----eEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 467999999999999997655 7999999987543333233 4445557888899999999999999999999999
Q ss_pred cccCCcH--------------------------HHHHhc---ccccccCCCCccccccCeEEecCCCccc----------
Q 007935 426 FIRNGSL--------------------------YAALHG---FGLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 426 y~~~GsL--------------------------~~~L~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|+ ++.+ ..|||. ..|.++.+.|+.+..+..++..+++...
T Consensus 105 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183 (318)
T ss_dssp CC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccc
Confidence 99 3343 244554 3467788888888777788888876432
Q ss_pred ccCCCcccCccccc----cCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCC-c--cccChh
Q 007935 467 SAISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-S--EVIDPA 539 (584)
Q Consensus 467 ~~gt~~y~aPE~~~----~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~-~--~~~d~~ 539 (584)
..||..|+|||++. .+..++.++|||||||++|||+||+.||..... .............+. + ..+++
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 258 (318)
T 2dyl_A 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEPPLLPGHMGFSG- 258 (318)
T ss_dssp ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCCCCCCSSSCCCH-
T ss_pred cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCCCCCCccCCCCH-
Confidence 36889999999864 235688999999999999999999999975222 223333333332221 1 11233
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+.+++.+||+.||.+|||+.|+++
T Consensus 259 ------------~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 259 ------------DFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ------------HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------------HHHHHHHHHccCChhHCcCHHHHhh
Confidence 3445777799999999999999975
No 237
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.8e-27 Score=236.03 Aligned_cols=201 Identities=16% Similarity=0.226 Sum_probs=148.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhc----CCCceeeeeEEEEeC
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARV----QHPNIVRLKAFYYAN 417 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l----~HpnIV~l~g~~~~~ 417 (584)
.+.||+|+||.||+|+...++ +.||||++...... .....+.+|+.++.++ +||||+++++++.+.
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDR-----LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTC-----CEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred eeEEEcCCCEEEEEEEEccCC-----eEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 467999999999999987665 89999999764221 1235577899999999 899999999999999
Q ss_pred CceeEeeec-ccCCcHHHHHhc-------------------------c--cccccCCCCcccc-ccCeEEecCCCcc---
Q 007935 418 DEKLLISDF-IRNGSLYAALHG-------------------------F--GLNRLLPGTSKVT-KNETIVTSGTGSR--- 465 (584)
Q Consensus 418 ~~~~lV~Ey-~~~GsL~~~L~~-------------------------~--g~~~~~~~~~~i~-~~~~~~~~~~~~~--- 465 (584)
+..++|||| +++|+|.+++.. . -|+++.+.|+.+. .++.++..+++..
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~ 190 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEEC
T ss_pred CeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhc
Confidence 999999999 889999776642 2 3577778888776 5677777777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChh
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 539 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~ 539 (584)
...||..|+|||++......+.++|||||||++|||++|+.||... .. .......+...+++.
T Consensus 191 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~----~~~~~~~~~~~~~~~ 259 (312)
T 2iwi_A 191 HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QE----ILEAELHFPAHVSPD 259 (312)
T ss_dssp CSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHHTCCCCCTTSCHH
T ss_pred ccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HH----HhhhccCCcccCCHH
Confidence 2368899999998665434456999999999999999999999631 11 112222233333333
Q ss_pred hhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 540 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 540 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 260 -------------~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 260 -------------CCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------------HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------HHHHHHHHccCChhhCcCHHHHhc
Confidence 345777799999999999999986
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.94 E-value=3.2e-27 Score=237.35 Aligned_cols=201 Identities=18% Similarity=0.256 Sum_probs=154.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----hhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----WRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|+...++ +.||||+++..... ...+.+.+|+.++++++ ||||+++++++.+.+.
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDN-----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTT-----EEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 467999999999999987665 89999999765221 12356889999999996 5999999999999999
Q ss_pred eeEeeecccC-CcHHHHHh-------------------------cc--cccccCCCCcccc-ccCeEEecCCCccc----
Q 007935 420 KLLISDFIRN-GSLYAALH-------------------------GF--GLNRLLPGTSKVT-KNETIVTSGTGSRI---- 466 (584)
Q Consensus 420 ~~lV~Ey~~~-GsL~~~L~-------------------------~~--g~~~~~~~~~~i~-~~~~~~~~~~~~~~---- 466 (584)
.++||||+.+ ++|.+++. +. .|+++.+.|+.+. .+..++..|++...
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc
Confidence 9999999986 88876654 33 3677888888877 55777888877432
Q ss_pred -----ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhh
Q 007935 467 -----SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 541 (584)
Q Consensus 467 -----~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~ 541 (584)
..||..|+|||++.....++.++|||||||++|||+||+.||... .. ...........+++.
T Consensus 203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~----~~~~~~~~~~~~~~~-- 269 (320)
T 3a99_A 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EE----IIRGQVFFRQRVSSE-- 269 (320)
T ss_dssp SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHHCCCCCSSCCCHH--
T ss_pred ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hh----hhcccccccccCCHH--
Confidence 368999999998665444578999999999999999999999641 11 112222223333333
Q ss_pred hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 542 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 542 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+.+++.+||+.||++|||+.|+++
T Consensus 270 -----------~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 270 -----------CQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----------HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----------HHHHHHHHccCChhhCcCHHHHhc
Confidence 445777799999999999999986
No 239
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.94 E-value=8.4e-27 Score=236.09 Aligned_cols=225 Identities=18% Similarity=0.251 Sum_probs=156.4
Q ss_pred ceeceeecCceEEEEEec-CCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc------eeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN------IVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~-~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn------IV~l~g~~~~~~~ 419 (584)
.+.||+|+||.||+|... .++ +.||||+++... ...+.+.+|++++++++|+| |+++++++.+.+.
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGG-----RHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTT-----EEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred EEEEecCCCeEEEEEEecCCCC-----cEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 467999999999999873 333 899999997642 23477899999999997665 9999999999999
Q ss_pred eeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccc-----------------
Q 007935 420 KLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTK----------------- 453 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~----------------- 453 (584)
.++||||+ +|+|.+++. +. -|+++++.|+.+..
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999999 889876654 22 35677777776654
Q ss_pred --cCeEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 007935 454 --NETIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 523 (584)
Q Consensus 454 --~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~ 523 (584)
+..++..++|.. ...||+.|+|||++. +..++.++|||||||++|||+||+.||..... ......+.
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS--KEHLAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH--HHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhh-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH
Confidence 334666777643 246899999999955 46899999999999999999999999975321 11111121
Q ss_pred HHhhcCCC-C------ccc-------cCh--hhh------------hhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHH
Q 007935 524 KAFRERRP-L------SEV-------IDP--ALV------------KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 575 (584)
Q Consensus 524 ~~~~~~~~-~------~~~-------~d~--~~~------------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 575 (584)
......+. + ... .+. ... ...........+.+++.+||+.||++|||+.|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11110000 0 000 000 000 0000112345678999999999999999999998
Q ss_pred HH--HHhhh
Q 007935 576 ES--LDRVK 582 (584)
Q Consensus 576 ~~--L~~i~ 582 (584)
+. +++++
T Consensus 328 ~hp~f~~~~ 336 (339)
T 1z57_A 328 KHPFFDLLK 336 (339)
T ss_dssp TSGGGGGGG
T ss_pred cCHHHHHHh
Confidence 53 55544
No 240
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.94 E-value=5.3e-27 Score=235.07 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=150.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-cchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeCCceeEe
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYANDEKLLI 423 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~~~~~lV 423 (584)
.+.||+|+||.||++...++ +.||||++.... .....+.|.+|++++.+++ ||||+++++++.+++..++|
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKK------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEEEECCSSEEEEEEECTTC------CEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred EEEecCCCCEEEEEEEcCCC------cEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 46899999999999998764 789999997642 3334578999999999997 59999999999999999999
Q ss_pred eecccCCcHHHHHh-------------------------cc--cccccCCCCccccccCeEEecCCCccc----------
Q 007935 424 SDFIRNGSLYAALH-------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI---------- 466 (584)
Q Consensus 424 ~Ey~~~GsL~~~L~-------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~---------- 466 (584)
|| +.+|+|.+++. +. .|+++.+.|+.+. ++.++..++|...
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~ 184 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV 184 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcccccc
Confidence 99 56789876654 22 3567777777663 4666777776432
Q ss_pred ---ccCCCcccCcccccc----------CCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcC--CC
Q 007935 467 ---SAISNVYLAPEARIY----------GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RP 531 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~----------~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~--~~ 531 (584)
..||..|+|||++.. ...++.++|||||||++|||+||+.||..... ............ ..
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 260 (313)
T 3cek_A 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIIDPNHEIE 260 (313)
T ss_dssp -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHCTTSCCC
T ss_pred ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH----HHHHHHHHHhcccccC
Confidence 257999999998543 13688899999999999999999999975322 112222222211 11
Q ss_pred CccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 532 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 532 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.+...++ .+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~-------------~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 261 FPDIPEK-------------DLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CCCCSCH-------------HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchH-------------HHHHHHHHHccCCcccCcCHHHHhc
Confidence 2222222 3455777899999999999999985
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.94 E-value=4.7e-27 Score=237.77 Aligned_cols=205 Identities=18% Similarity=0.268 Sum_probs=129.7
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHH-HHHhcCCCceeeeeEEEEe----CCce
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVE-AIARVQHPNIVRLKAFYYA----NDEK 420 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~-~l~~l~HpnIV~l~g~~~~----~~~~ 420 (584)
..++||+|+||.||+|+...++ +.||||++... ....+|+. .+..++||||+++++++.. .+..
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 33 SKQVLGLGVNGKVLECFHRRTG-----QKCALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTC-----CEEEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeeeeCCCeEEEEEEECCCC-----CEEEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 3467999999999999998765 89999999753 22333443 4566799999999999987 4458
Q ss_pred eEeeecccCCcHHHHHhc---------------------------c--cccccCCCCcccccc---CeEEecCCCcc---
Q 007935 421 LLISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTKN---ETIVTSGTGSR--- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~~---~~~~~~~~~~~--- 465 (584)
++||||+++|+|.+++.. . -|+++++.|+.+..+ ..++..++|..
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999999999777643 2 357777777776543 33677777643
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCc----cc
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS----EV 535 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~----~~ 535 (584)
...||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..............+ ..
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 259 (336)
T 3fhr_A 182 TQNALQTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PGMKRRIRLGQYGFPNPEWSE 259 (336)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCCTTTSTT
T ss_pred cccccccCCCCcCccChhhhC-CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hhHHHhhhccccccCchhhcc
Confidence 236789999999954 467899999999999999999999999754322110 001111111111111 12
Q ss_pred cChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
+++ .+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~-------------~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 260 VSE-------------DAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCH-------------HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCH-------------HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222 3456788899999999999999986
No 242
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.94 E-value=9.7e-27 Score=239.87 Aligned_cols=155 Identities=22% Similarity=0.277 Sum_probs=125.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CC-----ceeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HP-----NIVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-Hp-----nIV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|+...++ +.||||+++... ...+++.+|+.++..++ |+ +||++++++...+..
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQ-----EWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTT-----EEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred EEEEeecCCEEEEEEEEcCCC-----cEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 468999999999999987765 899999998542 23467888999999885 55 499999999999999
Q ss_pred eEeeecccCCcHHHHHhc-------------------------------ccccccCCCCccccc--cCeEEecCCCcc--
Q 007935 421 LLISDFIRNGSLYAALHG-------------------------------FGLNRLLPGTSKVTK--NETIVTSGTGSR-- 465 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~-------------------------------~g~~~~~~~~~~i~~--~~~~~~~~~~~~-- 465 (584)
++||||++ |+|.+++.. ..|+++++.|+.+.. +..++..|||..
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 99999996 588665532 236777788877743 456777887754
Q ss_pred ------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 007935 466 ------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 510 (584)
Q Consensus 466 ------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~ 510 (584)
...||+.|+|||++.. ..++.++|||||||++|||+||+.||.+
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccccCCccccChHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2468999999999554 6899999999999999999999999985
No 243
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.94 E-value=3e-26 Score=230.91 Aligned_cols=219 Identities=18% Similarity=0.222 Sum_probs=151.6
Q ss_pred ceeceeecCceEEEEEec-CCCCCCCceEEEEEEecCCCc-chhhHhHHHHHHHHHhc---CCCceeeeeEEEE-----e
Q 007935 347 AYVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYY-----A 416 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~-~~~~~~~~~~vAvK~l~~~~~-~~~~~~f~~Ei~~l~~l---~HpnIV~l~g~~~-----~ 416 (584)
.+.||+|+||.||+|+.. .++ +.||||+++.... ......+.+|+.+++++ +||||+++++++. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTT-----EEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred eeeecccccEEEEEEEecCCCC-----EEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 467999999999999984 333 8999999975422 22235678898888777 8999999999997 4
Q ss_pred CCceeEeeecccCCcHHHHHh---------------------------cc--cccccCCCCccccccCeEEecCCCccc-
Q 007935 417 NDEKLLISDFIRNGSLYAALH---------------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI- 466 (584)
Q Consensus 417 ~~~~~lV~Ey~~~GsL~~~L~---------------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~- 466 (584)
....++||||++ |+|.+++. .. .|+++.+.|+.+..++.++..++|...
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 567899999998 68876653 32 357777888888777788888876432
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCC--CCccc
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR--PLSEV 535 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ 535 (584)
..||..|+|||++.. ..++.++|||||||++|||+||+.||.+.... ..+..... ...... .....
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~-~~~~~~~~~~~~~ 246 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD-VIGLPGEEDWPRD 246 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH-HHCCCCGGGSCTT
T ss_pred ccCCCCccccccccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH-HcCCCCcccCccc
Confidence 367899999999554 67999999999999999999999999753211 11111111 111000 00000
Q ss_pred c-----------ChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 536 I-----------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 536 ~-----------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
. ...+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFV--TDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTC--CSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccCcchhhhcc--ccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00000000 011234567888999999999999999984
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.94 E-value=1.1e-26 Score=238.70 Aligned_cols=221 Identities=16% Similarity=0.177 Sum_probs=151.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----------CCceeeeeEEEE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----------HPNIVRLKAFYY 415 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----------HpnIV~l~g~~~ 415 (584)
.+.||+|+||.||+|+....+ +.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNN-----THVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTT-----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred EEeeeecCCeEEEEEEecCCC-----cEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 467999999999999987665 899999997532 23377899999999986 899999999998
Q ss_pred eCC----ceeEeeecccCCcHHHHH---------------------------hcc-c--ccccCCCCcccccc------C
Q 007935 416 AND----EKLLISDFIRNGSLYAAL---------------------------HGF-G--LNRLLPGTSKVTKN------E 455 (584)
Q Consensus 416 ~~~----~~~lV~Ey~~~GsL~~~L---------------------------~~~-g--~~~~~~~~~~i~~~------~ 455 (584)
..+ ..++||||+ +|+|.+++ |.. | |+++++.|+.+..+ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 754 689999999 88886554 443 3 56777777776432 2
Q ss_pred eEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHHh
Q 007935 456 TIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK-GLESLVRKAF 526 (584)
Q Consensus 456 ~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~-~l~~~~~~~~ 526 (584)
.++..++|.. ...||+.|+|||++.. ..++.++|||||||++|||+||+.||........ .-........
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5667777643 2468999999999554 6799999999999999999999999985432211 0111111111
Q ss_pred hcCCCCccc--------------------cC----hhhhhh-----hhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 527 RERRPLSEV--------------------ID----PALVKE-----IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 527 ~~~~~~~~~--------------------~d----~~~~~~-----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....++.. +. ..+... .........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 100000000 00 000000 011234567889999999999999999999985
No 245
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=1.4e-26 Score=260.10 Aligned_cols=200 Identities=29% Similarity=0.380 Sum_probs=165.5
Q ss_pred cccCCCCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCCccc---CC---------
Q 007935 15 PAPLCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGY---MP--------- 82 (584)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~~~---~~--------- 82 (584)
.++++++.++|.+||++||+++. ||. .+++|.. +.+||.|.||+|+.++|+.|+|+++++.|. +|
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 44555667889999999999997 777 8999974 467899999999988999999999999886 43
Q ss_pred --------------ccccCCCCCCEEEccCCCCCCCCcc--cccCCCCCCEEecCCCcccCCCCccc-CCCCCCCeeecc
Q 007935 83 --------------SELGLLNSLTRLSLASNNFSKPIPA--NLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLS 145 (584)
Q Consensus 83 --------------~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~ls 145 (584)
+.|+.+++|++|+|++|.++|.+|. .+.++++|++|+|++|++++.+|..+ .++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788889999999999999998888 89999999999999999998888776 789999999999
Q ss_pred cCCCCCCchHH---hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 146 SNLLNGSLPEF---LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 146 ~N~l~~~~p~~---~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|++++..|.. +.++++|+ .|++++|++++.+|. ..+++|++|+|++|.+++.+|.+..+.++..+.+++|.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELK-HLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCC-EEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred CCccCCcCChhhhhhccCCCCC-EEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 99999888877 67788888 888888888776653 67788888888888888877766666666666666664
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.5e-26 Score=241.53 Aligned_cols=205 Identities=17% Similarity=0.186 Sum_probs=144.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCCceeEee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..++||+|+||+||.....++ +.||||++..... +.+.+|+++++++ +|||||++++++.+.+..++||
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~------~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDN------RDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSS------SEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCeeecCcCEEEEEEEEeCC------eEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 346899999999654444444 7899999976422 4467899999999 8999999999999999999999
Q ss_pred ecccCCcHHHHHh--------------------------cc--cccccCCCCcccccc-----CeEEecCCCcc------
Q 007935 425 DFIRNGSLYAALH--------------------------GF--GLNRLLPGTSKVTKN-----ETIVTSGTGSR------ 465 (584)
Q Consensus 425 Ey~~~GsL~~~L~--------------------------~~--g~~~~~~~~~~i~~~-----~~~~~~~~~~~------ 465 (584)
|||+ |+|.+++. .. -|+++++.|+.+..+ ..++..++|..
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 9996 58866653 33 467888888877432 23446666532
Q ss_pred --------cccCCCcccCcccccc--CCCCCCccchhhHHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc
Q 007935 466 --------ISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSE 534 (584)
Q Consensus 466 --------~~~gt~~y~aPE~~~~--~~~~~~ksDV~SfGvvl~Ellt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 534 (584)
...||+.|+|||++.. +..++.++|||||||++|||+| |+.||..... ........ ... ..
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~-~~ 248 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------RQANILLG-ACS-LD 248 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------HHHHHHTT-CCC-CT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------HHHHHHhc-cCC-cc
Confidence 1358999999998653 3567889999999999999999 9999864211 11111111 111 11
Q ss_pred ccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 535 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 535 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
...+.. .....+.+++.+||+.||++|||+.||++
T Consensus 249 ~~~~~~-------~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 CLHPEK-------HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TSCTTC-------HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCccc-------cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111 11223567889999999999999999984
No 247
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.93 E-value=5e-26 Score=232.03 Aligned_cols=220 Identities=17% Similarity=0.206 Sum_probs=153.1
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc------eeeeeEEEEeCCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN------IVRLKAFYYANDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn------IV~l~g~~~~~~~~ 420 (584)
.+.||+|+||.||+|.....++ +.||||+++... ...+.+.+|+.++++++|+| ++.+++++...+..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTT----EEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEeeccCCeEEEEEEecCCCc----eEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 4679999999999999865431 689999997532 23477899999999998766 99999999999999
Q ss_pred eEeeecccCCcHHHHH---------------------------hccc--ccccCCCCccc-------------------c
Q 007935 421 LLISDFIRNGSLYAAL---------------------------HGFG--LNRLLPGTSKV-------------------T 452 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L---------------------------~~~g--~~~~~~~~~~i-------------------~ 452 (584)
++||||+ +|+|.+++ |+.| |+++++.|+.+ .
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence 9999999 55664443 4333 57777788776 3
Q ss_pred ccCeEEecCCCcc--------cccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 007935 453 KNETIVTSGTGSR--------ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 524 (584)
Q Consensus 453 ~~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~ 524 (584)
.+..++..++|.. ...||+.|+|||++.. ..++.++|||||||++|||+||+.||...... .....+..
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~ 253 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--EHLVMMEK 253 (355)
T ss_dssp SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHH
T ss_pred CCCcEEEeecCccccccccccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 3456677777643 2468999999999554 68999999999999999999999999753211 11111122
Q ss_pred HhhcCCC-------Cc-------cccChhhhh--------------hhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 525 AFRERRP-------LS-------EVIDPALVK--------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 525 ~~~~~~~-------~~-------~~~d~~~~~--------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
.....+. .. ...+..... ..........+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111000 00 000000000 0001122346788999999999999999999974
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.93 E-value=5.1e-27 Score=253.10 Aligned_cols=220 Identities=19% Similarity=0.150 Sum_probs=154.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEe------CCce
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA------NDEK 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~------~~~~ 420 (584)
.+.||+|+||.||+|....++ +.||||+++........+.|.+|++++++++|||||++++++.. .+..
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg-----~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTG-----EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTT-----CCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred EEEEeeCCCeEEEEEEECCCC-----cEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 457999999999999987665 78999999875455556789999999999999999999998765 6678
Q ss_pred eEeeecccCCcHHHHHhc----------------------------c--cccccCCCCccccccCe---EEecCCCccc-
Q 007935 421 LLISDFIRNGSLYAALHG----------------------------F--GLNRLLPGTSKVTKNET---IVTSGTGSRI- 466 (584)
Q Consensus 421 ~lV~Ey~~~GsL~~~L~~----------------------------~--g~~~~~~~~~~i~~~~~---~~~~~~~~~~- 466 (584)
++||||+++|+|.++++. . .|+++.+.|+.+..++. ++..++|...
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 999999999999877643 2 36777888887765543 5566665332
Q ss_pred ---------ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHh-----------
Q 007935 467 ---------SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF----------- 526 (584)
Q Consensus 467 ---------~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~----------- 526 (584)
..||..|+|||++. +..++.++|||||||++|||+||+.||.... ....|.....
T Consensus 174 ~~~~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 174 LDQGELCTEFVGTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp TTSCCCCCCCCSCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCC
T ss_pred cccccccccccCCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhh
Confidence 36899999999954 4689999999999999999999999996421 1111100000
Q ss_pred --hcCCCCccccC-h-hhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHH-----HHHHHhh
Q 007935 527 --RERRPLSEVID-P-ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV-----SESLDRV 581 (584)
Q Consensus 527 --~~~~~~~~~~d-~-~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev-----~~~L~~i 581 (584)
.....+..... + .+.. .....+.+++.+||+.||++|||+.|+ .+.++.+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~-----~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~i 307 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSG-----ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCG-----GGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHH
T ss_pred hhccccccccccCCchhhch-----hhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHH
Confidence 00000000000 0 0100 122456778999999999999999884 4555544
No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=3.4e-26 Score=253.16 Aligned_cols=203 Identities=22% Similarity=0.244 Sum_probs=153.9
Q ss_pred ceeceeecCceEEEEEecC-CCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc-----e
Q 007935 347 AYVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-----K 420 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~-----~ 420 (584)
.+.||+|+||.||+|.... ++ +.||||++.........+.|.+|++++++++|||||++++++.+.+. .
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNG-----RPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTT-----EEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCC-----cEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 4579999999999999865 33 89999999765444455789999999999999999999999998766 7
Q ss_pred eEeeecccCCcHH-----------------------HHHhccc--ccccCCCCccccccCeEEecCCCcc-------ccc
Q 007935 421 LLISDFIRNGSLY-----------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSR-------ISA 468 (584)
Q Consensus 421 ~lV~Ey~~~GsL~-----------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~ 468 (584)
|+||||+++|+|. +|||..| |+++++.|+.+..+ .++..|||.. ...
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~ 238 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY 238 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCC
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccCCccC
Confidence 9999999999984 4455544 68888888887665 6677787743 246
Q ss_pred CCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHH
Q 007935 469 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 548 (584)
Q Consensus 469 gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 548 (584)
||+.|||||++.. .++.++|||||||++|||++|..||.+..... +.. ..+. ..
T Consensus 239 gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------~~~-~~~~-------~~ 292 (681)
T 2pzi_A 239 GTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------LPE-DDPV-------LK 292 (681)
T ss_dssp CCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------CCT-TCHH-------HH
T ss_pred CCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCccccccc----------------ccc-cccc-------cc
Confidence 8999999998654 35899999999999999999998876421111 000 0010 01
Q ss_pred HHHHHHHHHhcccCCCCCCCCC-hHHHHHHHHhh
Q 007935 549 QVLATFHIALNCTELDPEFRPR-MRTVSESLDRV 581 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~~L~~i 581 (584)
....+.+++.+||+.||++||+ ++++...|..+
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 1235667888999999999995 55566666554
No 250
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=4.1e-26 Score=255.36 Aligned_cols=194 Identities=25% Similarity=0.359 Sum_probs=167.9
Q ss_pred CCCchHHHHHHHHHHHhcccCCCCCCCCCCCCC------CCCCcc------------eeeEecC-CCEEEEEcCCCCCcc
Q 007935 19 CFSLNQDGLALLALKAAIAQDPTRALDSWSESD------STPCHW------------SGIHCIR-NRVTSLYLPNRNLTG 79 (584)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~------~~~c~w------------~gv~c~~-~~v~~l~l~~~~l~~ 79 (584)
.+...+|..||++||+++. +| +|+.++ +++|.| .||+|+. ++|+.|+|++|+|+|
T Consensus 264 ~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred cccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3455689999999999995 44 786543 334999 9999984 799999999999999
Q ss_pred cCCccccCCCCCCEEEc-cCCCCCCC------------------------------------------------------
Q 007935 80 YMPSELGLLNSLTRLSL-ASNNFSKP------------------------------------------------------ 104 (584)
Q Consensus 80 ~~~~~~~~l~~L~~L~l-~~n~l~~~------------------------------------------------------ 104 (584)
.+|+.|++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 77765444
Q ss_pred ----------------------CcccccCCCCCCEEecCCCcccC-----------------CCCcccC--CCCCCCeee
Q 007935 105 ----------------------IPANLFNATNLVYLDLAHNSFCG-----------------PIPDRIK--TLKNLTHLD 143 (584)
Q Consensus 105 ----------------------~p~~~~~l~~L~~L~l~~N~l~~-----------------~~p~~~~--~l~~L~~L~ 143 (584)
+|..|.++++|++|+|++|+|+| .+|..++ ++++|+.|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 88889999999999999999998 3899988 999999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEecccc-Ccc-ccCccccCCC-------CCcEEEeecCCCccCCCC---CCCcccc
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQ-FSG-QIPEMYGHFP-------VMVSLDLRNNNLSGEIPQ---VGSLLNQ 211 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~---~~~~~~~ 211 (584)
|++|.+.+.+|..|.++++|+ .|+|++|+ |+| .+|..+++++ +|+.|+|++|.++ .+|. +..+.++
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~-~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQ-SLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCC-EEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred CcCCCCCccChHHHhCCCCCC-EEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999 99999998 998 8888777665 9999999999999 6665 6677777
Q ss_pred CCcccCCCC
Q 007935 212 GPTAFSGNP 220 (584)
Q Consensus 212 ~~~~~~~n~ 220 (584)
..+.+++|.
T Consensus 576 ~~L~Ls~N~ 584 (876)
T 4ecn_A 576 GLLDCVHNK 584 (876)
T ss_dssp CEEECTTSC
T ss_pred CEEECCCCC
Confidence 777777775
No 251
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.92 E-value=5.1e-26 Score=229.09 Aligned_cols=199 Identities=21% Similarity=0.272 Sum_probs=177.5
Q ss_pred CCCchHHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCcceeeEecC----------CCEEEEEcCCCCCcccCCccc
Q 007935 19 CFSLNQDGLALLALKAAIAQDPTRALDSWS---ESDSTPCHWSGIHCIR----------NRVTSLYLPNRNLTGYMPSEL 85 (584)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~w~---~~~~~~c~w~gv~c~~----------~~v~~l~l~~~~l~~~~~~~~ 85 (584)
+.+..+|..||++||.++..|+.+.+.+|. .....+|.|.|+.|.. .+|+.|+|++|+++ .+|..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 456677899999999999778777778894 4456789999999952 68999999999999 788899
Q ss_pred cCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhc------
Q 007935 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD------ 159 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~------ 159 (584)
+.+++|++|+|++|.|+ .+|..+..+++|++|+|++|+++ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 79999999999999999999999 88999999999999999999999999988765
Q ss_pred ---cccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCC
Q 007935 160 ---LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 160 ---l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 222 (584)
+++|+ .|+|++|+++ .+|..++++++|+.|+|++|.+++.++.+..+.++..+.+++|...
T Consensus 179 ~~~l~~L~-~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 179 HQGLVNLQ-SLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp EEESTTCC-EEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred hccCCCCC-EEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 99999 9999999999 8899999999999999999999987777777778888888887644
No 252
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.92 E-value=8.1e-25 Score=217.63 Aligned_cols=196 Identities=19% Similarity=0.293 Sum_probs=138.7
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHH-HhcCCCceeeeeEEEEe----CCcee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAI-ARVQHPNIVRLKAFYYA----NDEKL 421 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l-~~l~HpnIV~l~g~~~~----~~~~~ 421 (584)
.++||+|+||.||+|.....+ +.||||+++.. +.+.+|++++ +..+||||+++++++.. .+..+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQ-----EKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred CcccccCCCeEEEEEEEcCCC-----cEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 467999999999999987765 89999999642 5678999988 55599999999999987 67789
Q ss_pred EeeecccCCcHHHHHhc---------------------------c--cccccCCCCccccc---cCeEEecCCCcccccC
Q 007935 422 LISDFIRNGSLYAALHG---------------------------F--GLNRLLPGTSKVTK---NETIVTSGTGSRISAI 469 (584)
Q Consensus 422 lV~Ey~~~GsL~~~L~~---------------------------~--g~~~~~~~~~~i~~---~~~~~~~~~~~~~~~g 469 (584)
+||||+++|+|.+++.. . -|+++++.|+.+.. +..++..++|..
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a---- 167 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---- 167 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC----
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc----
Confidence 99999999999777643 2 35777778877766 556777777643
Q ss_pred CCcccCccccccCCCCCCccchhhHHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHHhhcCCCCcc-ccChhhhhhhhHHH
Q 007935 470 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE-VIDPALVKEIHAKR 548 (584)
Q Consensus 470 t~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~ 548 (584)
.+. .+..++.++|||||||++|||+||+.||....... ... .......... ........ .
T Consensus 168 ------~~~--~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~-----~ 228 (299)
T 3m2w_A 168 ------KET--TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISP-GMKTRIRMGQYEFPNPEWS-----E 228 (299)
T ss_dssp ------EEC--TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------C-CSCCSSCTTCCSSCHHHHT-----T
T ss_pred ------ccc--ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----hhH-HHHHHHhhccccCCchhcc-----c
Confidence 222 23578899999999999999999999997532211 000 0000000000 00100000 1
Q ss_pred HHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 549 QVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 549 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
....+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 229 VSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1235667888899999999999999986
No 253
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.92 E-value=1.9e-25 Score=245.28 Aligned_cols=197 Identities=23% Similarity=0.330 Sum_probs=161.5
Q ss_pred CCchHHHHHHHHHHHhcccCCCC-------CCCCCCCCCCCCCcc---eeeEecC-CCEEEEEcCCCCCcccCCccccCC
Q 007935 20 FSLNQDGLALLALKAAIAQDPTR-------ALDSWSESDSTPCHW---SGIHCIR-NRVTSLYLPNRNLTGYMPSELGLL 88 (584)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~-------~l~~w~~~~~~~c~w---~gv~c~~-~~v~~l~l~~~~l~~~~~~~~~~l 88 (584)
+...+|..||.+++.++..+... ...+|..+ .++|.| .||+|+. ++|+.|+|++++++|.+|+.|++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 34457899999999998644322 23479754 678999 9999975 699999999999999999999999
Q ss_pred CCCCEEEccCCC--------------------------------------------------------------------
Q 007935 89 NSLTRLSLASNN-------------------------------------------------------------------- 100 (584)
Q Consensus 89 ~~L~~L~l~~n~-------------------------------------------------------------------- 100 (584)
++|++|+|++|+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999884
Q ss_pred ----------CCCCCcccccCCCCCCEEecCCCcccCC-----------------CCcccC--CCCCCCeeecccCCCCC
Q 007935 101 ----------FSKPIPANLFNATNLVYLDLAHNSFCGP-----------------IPDRIK--TLKNLTHLDLSSNLLNG 151 (584)
Q Consensus 101 ----------l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~L~ls~N~l~~ 151 (584)
|+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|+++|
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 345 788899999999999999999986 898888 99999999999999998
Q ss_pred CchHHhhccccCccEEEecccc-Ccc-ccCccccCC------CCCcEEEeecCCCccCCCC---CCCccccCCcccCCCC
Q 007935 152 SLPEFLLDLRALTGTLNLSFNQ-FSG-QIPEMYGHF------PVMVSLDLRNNNLSGEIPQ---VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 152 ~~p~~~~~l~~L~~~l~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~---~~~~~~~~~~~~~~n~ 220 (584)
.+|..+.++++|+ .|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. +..+.++..+.+++|.
T Consensus 264 ~~p~~l~~l~~L~-~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 264 KLPTFLKALPEMQ-LINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SCCTTTTTCSSCC-EEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred cChHHHhcCCCCC-EEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 9999899999998 89999998 888 788777776 78888888888888 5554 5566666666666664
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1.2e-24 Score=244.32 Aligned_cols=168 Identities=39% Similarity=0.711 Sum_probs=147.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc----------------------------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF---------------------------------- 110 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~---------------------------------- 110 (584)
.+++.|+|++|+++|.+|..++.+++|+.|+|++|.++|.+|..++
T Consensus 514 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 4577777777777777777777777888888888777777765443
Q ss_pred ------------------------------------CCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch
Q 007935 111 ------------------------------------NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP 154 (584)
Q Consensus 111 ------------------------------------~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 154 (584)
.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 24668889999999999999999999999999999999999999
Q ss_pred HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCCCCCCCCCCCC
Q 007935 155 EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSPCPEP 234 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~C~~~ 234 (584)
..++++++|+ .|||++|+++|.+|..++++++|++|+|++|+++|.+|..+.+.++...+|.||+++||.|.. +|...
T Consensus 674 ~~l~~L~~L~-~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 674 DEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp GGGGGCTTCC-EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred hHHhCCCCCC-EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 9999999999 999999999999999999999999999999999999999888999999999999999999876 78643
No 255
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.90 E-value=4.9e-24 Score=221.65 Aligned_cols=201 Identities=13% Similarity=0.091 Sum_probs=138.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC--cchhhHhHHHHHHHHHhcCC-Cceeee---------e---
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQH-PNIVRL---------K--- 411 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~f~~Ei~~l~~l~H-pnIV~l---------~--- 411 (584)
.++||+|+||+||+|+....+ +.||||+++... .....+.|.+|+.+++.++| +|.... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g-----~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETG-----ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTC-----CEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred ecccccCCCEEEEEEEecCCC-----CceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 468999999999999987665 799999998442 22235789999999999987 322111 1
Q ss_pred ---------EEEEe-----CCceeEeeecccCCcHHHHH--------------------------------hcc--cccc
Q 007935 412 ---------AFYYA-----NDEKLLISDFIRNGSLYAAL--------------------------------HGF--GLNR 443 (584)
Q Consensus 412 ---------g~~~~-----~~~~~lV~Ey~~~GsL~~~L--------------------------------~~~--g~~~ 443 (584)
.++.. ....+++|+++ +|+|.+++ |+. .|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD 236 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 11111 12356777765 56776555 222 4788
Q ss_pred cCCCCccccccCeEEecCCCccc--------ccCCCcccCccccc---------cCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 444 LLPGTSKVTKNETIVTSGTGSRI--------SAISNVYLAPEARI---------YGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 444 ~~~~~~~i~~~~~~~~~~~~~~~--------~~gt~~y~aPE~~~---------~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
+++.|+.+..++.++..|||... ..| +.|||||++. .+..++.++|||||||++|||+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999998888888888887532 357 8999999862 44568899999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCCCCCCCChHHHHH
Q 007935 507 PDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 576 (584)
Q Consensus 507 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 576 (584)
||........ ........ ..++ ..+.+++.+||+.||++|||+.|+++
T Consensus 316 Pf~~~~~~~~-----~~~~~~~~----~~~~-------------~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALGG-----SEWIFRSC----KNIP-------------QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGSC-----SGGGGSSC----CCCC-------------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhhh-----HHHHHhhc----ccCC-------------HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9975322110 00011110 1112 24556888899999999999888754
No 256
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.89 E-value=7.7e-24 Score=214.24 Aligned_cols=205 Identities=11% Similarity=0.112 Sum_probs=144.4
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCC-------cchhhHhHHHHHHHHHhcC---------CCceee
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-------ATWRFKDFESEVEAIARVQ---------HPNIVR 409 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~f~~Ei~~l~~l~---------HpnIV~ 409 (584)
..+.||+|+||.||+|+. .+ +.||||+++... .....+.+.+|+.++++++ |||||+
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~------~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DH------TPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TT------EEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred heeeecccCceEEEEEEe-CC------ceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 357899999999999997 33 899999998652 1223477999999999986 777777
Q ss_pred eeEEEE------------------------------eCCceeEeeecccCCcH------------------------HHH
Q 007935 410 LKAFYY------------------------------ANDEKLLISDFIRNGSL------------------------YAA 435 (584)
Q Consensus 410 l~g~~~------------------------------~~~~~~lV~Ey~~~GsL------------------------~~~ 435 (584)
+.+.+. +.+..++||||+++|++ .+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 777653 26789999999999965 366
Q ss_pred Hh-cc--cccccCCCCccccccC--------------------eEEecCCCccc------ccCCCcccCccccccCCCCC
Q 007935 436 LH-GF--GLNRLLPGTSKVTKNE--------------------TIVTSGTGSRI------SAISNVYLAPEARIYGSKFT 486 (584)
Q Consensus 436 L~-~~--g~~~~~~~~~~i~~~~--------------------~~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~ 486 (584)
|| +. -|+|++++|+.+..++ .++..|||... ..||+.|||||++. +.. +
T Consensus 177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~-g~~-~ 254 (336)
T 2vuw_A 177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT-GDG-D 254 (336)
T ss_dssp HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC-CCS-S
T ss_pred HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc-CCC-c
Confidence 77 54 4788999999887775 77888888543 47899999999955 334 8
Q ss_pred CccchhhHHHH-HHHHHhCCCCCCCCCCCCCcH-HHHHHHHhhcCCCCccccChhhhhhhhHHHHHHHHHHHHhcccCCC
Q 007935 487 QKCDVYSFGIV-LLEILTGRLPDAGPENDGKGL-ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELD 564 (584)
Q Consensus 487 ~ksDV~SfGvv-l~ElltG~~p~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~ 564 (584)
.++||||+|++ .+++++|..||.. ... ........... .......+... .....++.+++.+||+.|
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKMLKQM-TFKTKCNTPAM-----KQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHHHHTC-CCSSCCCSHHH-----HHHHHHHHHHHHHGGGSS
T ss_pred cceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhhhhhh-ccCcccchhhh-----hhcCHHHHHHHHHHhccC
Confidence 89999998777 7788899999852 001 11111222111 11111111111 123346778999999976
Q ss_pred CCCCCChHHHH
Q 007935 565 PEFRPRMRTVS 575 (584)
Q Consensus 565 P~~RPt~~ev~ 575 (584)
|+.|++
T Consensus 324 -----sa~e~l 329 (336)
T 2vuw_A 324 -----SATDLL 329 (336)
T ss_dssp -----SHHHHH
T ss_pred -----CHHHHH
Confidence 898887
No 257
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.5e-22 Score=194.26 Aligned_cols=159 Identities=22% Similarity=0.206 Sum_probs=142.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 35889999999999988889999999999999999999988888999999999999999999877788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~~l~ 223 (584)
++|+|++..+..|..+++|+ .|+|++|+|++..+..|+.+++|+.|+|++|.|++.+| .+..+.++..+.+.+|+..|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLK-ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCccc-EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 99999976677788999999 99999999998777789999999999999999998877 35566778888899998766
Q ss_pred C
Q 007935 224 G 224 (584)
Q Consensus 224 ~ 224 (584)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 5
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=1.2e-22 Score=203.05 Aligned_cols=164 Identities=27% Similarity=0.423 Sum_probs=124.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCC-CCCEEecCCCccc-----------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFC----------------- 126 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~----------------- 126 (584)
.+++.|+|++|++++.+|..|+.+++|++|+|++|.|++.+|..+..++ +|++|+|++|+++
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~L 204 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEEC
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEEC
Confidence 3566666666666666666666666666666666666666666666555 5555555555554
Q ss_pred ------CCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 127 ------GPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 127 ------~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
+.+|..|..+++|+.|+|++|.+++.+|. +..+++|+ .|+|++|++++.+|..|..+++|+.|+|++|+++|
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLN-GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCC-EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCC-EEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 44555566677777777777777765555 77788888 99999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCcccCCCCCCCCCCCCCCC
Q 007935 201 EIPQVGSLLNQGPTAFSGNPGLCGFPLQSPC 231 (584)
Q Consensus 201 ~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~C 231 (584)
.+|....+.++..+.+.+|+.+|+.|.. .|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9998888888999999999999998765 45
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=1.5e-21 Score=185.93 Aligned_cols=150 Identities=24% Similarity=0.271 Sum_probs=125.1
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.+.|+|.+|.|.. .+++.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 5779999999974 35788888888888888888888888888888888887655556778888888888
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT-HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCS-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCC-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 888888766667788888888888888888 7888888888888 88888888887767778888888888888888887
Q ss_pred CCC
Q 007935 201 EIP 203 (584)
Q Consensus 201 ~~p 203 (584)
..+
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 654
No 260
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.1e-21 Score=182.04 Aligned_cols=153 Identities=22% Similarity=0.281 Sum_probs=134.9
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|.+|.|.. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 5778999999974 35899999999999777778899999999999999999765666789999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK-DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCC-EEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999977667789999999999999999977777789999999 99999999998777779999999999999999998
Q ss_pred CCCCC
Q 007935 201 EIPQV 205 (584)
Q Consensus 201 ~~p~~ 205 (584)
..|.+
T Consensus 163 ~~~~l 167 (208)
T 2o6s_A 163 TCPGI 167 (208)
T ss_dssp CTTTT
T ss_pred CCCCH
Confidence 87743
No 261
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=3e-21 Score=182.47 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=77.2
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|..|.|.. ..++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEEC
Confidence 4567787777753 13455555555555444445555555555555555555444555555555555555
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.++
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN-LLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCC-EEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55555533333344555555555555555544455555555555 5555555555444444555555555555555544
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=2.5e-21 Score=183.04 Aligned_cols=149 Identities=19% Similarity=0.242 Sum_probs=84.3
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCC-ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|..+.|.. ..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 3556776666643 134555555555555533 3355555556666665555554444555555566666
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+ .|+|++|+|++..|..|..+++|+.|+|++|.++
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR-LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS-EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC-EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 666655555555555555566666666655555555555555555 5556555555555555555555555555555555
Q ss_pred cC
Q 007935 200 GE 201 (584)
Q Consensus 200 ~~ 201 (584)
+.
T Consensus 167 c~ 168 (220)
T 2v70_A 167 CN 168 (220)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 263
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.2e-20 Score=181.49 Aligned_cols=154 Identities=21% Similarity=0.224 Sum_probs=97.6
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++++..+..|..+++|++|+|++|.|+...+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 35666666666665555566667777777777777665333444566677777777777665555556666677777777
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
+|++++..|..|..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++..+. +..+.++..+.+++|.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLT-YLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCccCeeCHHHhCcCcCCC-EEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 7776655555666666666 677777766655555566666777777777766665553 3344455555555553
No 264
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.82 E-value=1.5e-19 Score=176.93 Aligned_cols=159 Identities=27% Similarity=0.263 Sum_probs=141.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 5799999999999873 57999999999999999999877777899999999999999999887788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~ 223 (584)
++|++++..|..+..+++|+ .|+|++|++++..+..|+.+++|+.|+|++|.+++.+|. +..+.++..+.+.+|+..|
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLT-ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCccCccCHHHhccCccCC-EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 99999977777789999999 999999999988888899999999999999999998875 4567778888899998776
Q ss_pred CCC
Q 007935 224 GFP 226 (584)
Q Consensus 224 ~~~ 226 (584)
..+
T Consensus 220 ~~~ 222 (272)
T 3rfs_A 220 TCP 222 (272)
T ss_dssp CTT
T ss_pred cCc
Confidence 543
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=1.4e-20 Score=174.03 Aligned_cols=132 Identities=27% Similarity=0.373 Sum_probs=118.2
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeeccc
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 146 (584)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45667777785 56766654 899999999999976554 488999999999999999998899999999999999999
Q ss_pred CCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 147 NLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|+|++..|..|.++++|+ .|+|++|+|++.+|..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLK-TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCC-EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCC-EEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988888899999999 99999999999999999999999999999999998765
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=8.4e-20 Score=172.53 Aligned_cols=161 Identities=20% Similarity=0.273 Sum_probs=142.1
Q ss_pred eeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 59 GIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 59 gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
+-.|.. ..+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++
T Consensus 8 ~C~C~~---~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 81 (220)
T 2v9t_B 8 ACTCSN---NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81 (220)
T ss_dssp TSEEET---TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSS
T ss_pred CCEECC---CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcC
Confidence 467764 46899999998 5666554 68999999999999877778999999999999999999888999999999
Q ss_pred CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccC
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFS 217 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~ 217 (584)
|++|+|++|+|+...+..|.++++|+ .|+|++|+|++..|..|..+++|+.|+|++|.|++..+. +..+.++..+.+.
T Consensus 82 L~~L~Ls~N~l~~l~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 160 (220)
T 2v9t_B 82 LNSLVLYGNKITELPKSLFEGLFSLQ-LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLA 160 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCCccCHhHccCCCCCC-EEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeC
Confidence 99999999999965556678999999 999999999999999999999999999999999998874 5567778888999
Q ss_pred CCCCCCCCC
Q 007935 218 GNPGLCGFP 226 (584)
Q Consensus 218 ~n~~l~~~~ 226 (584)
+|+..|.+.
T Consensus 161 ~N~~~c~c~ 169 (220)
T 2v9t_B 161 QNPFICDCH 169 (220)
T ss_dssp SSCEECSGG
T ss_pred CCCcCCCCc
Confidence 999888654
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.81 E-value=2.1e-19 Score=175.66 Aligned_cols=161 Identities=23% Similarity=0.224 Sum_probs=143.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57999999999999776777899999999999999999866677889999999999999999888888999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~ 223 (584)
++|.+++..+..|..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++.++. +..+.++..+.+.+|+..|
T Consensus 141 s~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLK-ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCcCCccCHhHccCCcccc-eeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 99999976666789999999 999999999988788899999999999999999987764 4556777888999999877
Q ss_pred CCC
Q 007935 224 GFP 226 (584)
Q Consensus 224 ~~~ 226 (584)
.+.
T Consensus 220 ~c~ 222 (270)
T 2o6q_A 220 TCN 222 (270)
T ss_dssp SSS
T ss_pred CCc
Confidence 753
No 268
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=2.3e-20 Score=190.46 Aligned_cols=173 Identities=24% Similarity=0.235 Sum_probs=146.6
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCcccc-CCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|..+.|.. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..|..+++|++|+
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 3567888999964 3578999999999988888888 999999999999999987778899999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccc---cCCCCCcEEEeecC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY---GHFPVMVSLDLRNN 196 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N 196 (584)
|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|+|++..+..| ..+++|+.|+|++|
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQ-KLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCC-EEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 999999987777899999999999999999988889999999999 99999999996555555 67999999999999
Q ss_pred CCccCCCC-CCCccc--cCCcccCCCCCCCCC
Q 007935 197 NLSGEIPQ-VGSLLN--QGPTAFSGNPGLCGF 225 (584)
Q Consensus 197 ~l~~~~p~-~~~~~~--~~~~~~~~n~~l~~~ 225 (584)
+|++..+. +..+.. +..+.+.+|+..|.+
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 99975542 112222 245788999988875
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.81 E-value=2.9e-19 Score=176.30 Aligned_cols=150 Identities=29% Similarity=0.267 Sum_probs=82.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.|+|++|++++..+..|..+++|++|+|++|.|++ +|.. ..+++|++|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 56777777777776666667666666666666666654 2222 45555555555555555 445555555555555555
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGN 219 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 219 (584)
+|+|++..|..|.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+.++..+.+.+|
T Consensus 109 ~N~l~~l~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQ-ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCC-EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCcCcccCHHHHcCCCCCC-EEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 5555544444555555555 5555555555444444555555555555555555443322 22334444444444
No 270
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2e-19 Score=169.93 Aligned_cols=162 Identities=18% Similarity=0.231 Sum_probs=141.6
Q ss_pred eeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCC
Q 007935 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 58 ~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
.+..|.. +.+++++|+++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++
T Consensus 7 ~~C~C~~---~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 80 (220)
T 2v70_A 7 EKCRCEG---TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 80 (220)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC
Confidence 4566764 489999999984 676654 457999999999998655 457899999999999999998888899999
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcc
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTA 215 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~ 215 (584)
++|+.|+|++|+|++..|..|.++++|+ .|+|++|+|++..|..|..+++|+.|+|++|+|++..| .+..+.++..+.
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 159 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLK-TLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLN 159 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCC-EEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCC-EEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEE
Confidence 9999999999999988888899999999 99999999999999999999999999999999999877 455667788889
Q ss_pred cCCCCCCCCCC
Q 007935 216 FSGNPGLCGFP 226 (584)
Q Consensus 216 ~~~n~~l~~~~ 226 (584)
+.+|+..|.++
T Consensus 160 L~~N~l~c~c~ 170 (220)
T 2v70_A 160 LLANPFNCNCY 170 (220)
T ss_dssp CCSCCEECSGG
T ss_pred ecCcCCcCCCc
Confidence 99999887754
No 271
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=4e-22 Score=211.49 Aligned_cols=162 Identities=21% Similarity=0.153 Sum_probs=136.8
Q ss_pred CcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC
Q 007935 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK 134 (584)
Q Consensus 55 c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 134 (584)
|...++.-. ..++.|+|++|++++..+. .+++|+.|+|++|.|++..|..+..+++|++|+|++|+|++..|..+.
T Consensus 90 N~l~~l~~~-~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 90 NYVQELLVG-PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp SEEEEEEEC-TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred CcCCCCCCC-CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 344444422 5788999999999877654 468899999999999998898999999999999999999998888886
Q ss_pred -CCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCC
Q 007935 135 -TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGP 213 (584)
Q Consensus 135 -~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~ 213 (584)
.+++|+.|+|++|.|++. |. +..+++|+ .|+|++|+|++.+| .|..+++|+.|+|++|.|++.++.+..+.++..
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~-~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~ 241 (487)
T 3oja_A 166 ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLK-TLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEH 241 (487)
T ss_dssp GGTTTCCEEECTTSCCCEE-EC-CCCCTTCC-EEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCE
T ss_pred hhCCcccEEecCCCccccc-cc-cccCCCCC-EEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCE
Confidence 799999999999999955 43 44689999 99999999997544 599999999999999999987777777778888
Q ss_pred cccCCCCCCCC
Q 007935 214 TAFSGNPGLCG 224 (584)
Q Consensus 214 ~~~~~n~~l~~ 224 (584)
+.+.+|+..|+
T Consensus 242 L~l~~N~l~c~ 252 (487)
T 3oja_A 242 FDLRGNGFHCG 252 (487)
T ss_dssp EECTTCCBCHH
T ss_pred EEcCCCCCcCc
Confidence 89999987765
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=4.1e-19 Score=168.90 Aligned_cols=163 Identities=22% Similarity=0.222 Sum_probs=141.6
Q ss_pred cceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCC
Q 007935 56 HWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT 135 (584)
Q Consensus 56 ~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 135 (584)
.|..-.|.. +.+++++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 13 ~~~~~~Cs~---~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 86 (229)
T 3e6j_A 13 CPSQCSCSG---TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS 86 (229)
T ss_dssp CCTTCEEET---TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEeC---CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhccc
Confidence 355667864 56999999998 5666554 89999999999999988999999999999999999998666677899
Q ss_pred CCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCc
Q 007935 136 LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 214 (584)
+++|+.|+|++|+|++..+..|..+++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+. +..+.++..+
T Consensus 87 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~-~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTVLPSAVFDRLVHLK-ELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCEEECCCCcCCccChhHhCcchhhC-eEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 99999999999999977777789999999 9999999999 8899999999999999999999987764 4556778888
Q ss_pred ccCCCCCCCCCC
Q 007935 215 AFSGNPGLCGFP 226 (584)
Q Consensus 215 ~~~~n~~l~~~~ 226 (584)
.+.+|+..|.++
T Consensus 165 ~l~~N~~~c~c~ 176 (229)
T 3e6j_A 165 YLFGNPWDCECR 176 (229)
T ss_dssp ECTTSCBCTTBG
T ss_pred EeeCCCccCCcc
Confidence 899999877653
No 273
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.79 E-value=1.8e-19 Score=177.61 Aligned_cols=155 Identities=23% Similarity=0.190 Sum_probs=109.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|. +....|..+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 467777777777777777777777777777777776 6655566777777777777777777766677777777777777
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|++|++++..+..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.+++..| .+..+.++..+.+++|.
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLT-HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHhHhccCCCcc-EEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 777777755555677777777 77777777776555567777777777777777777654 23344455555566654
No 274
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.79 E-value=4.3e-19 Score=174.92 Aligned_cols=155 Identities=21% Similarity=0.191 Sum_probs=141.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc-ccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS-FCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+ ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 479999999999998888899999999999999999998889999999999999999998 8766688999999999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|++|.+++..|..+.++++|+ .|+|++|++++..+..|+.+++|+.|+|++|.+++..+. +..+.++..+.+++|.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQ-YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCCEECHhHhhCCcCCC-EEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 999999988899999999999 999999999987788899999999999999999987764 5567777778888875
No 275
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.79 E-value=2.4e-19 Score=180.25 Aligned_cols=153 Identities=22% Similarity=0.331 Sum_probs=127.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCC---------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKT--------- 135 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------- 135 (584)
.+++.|+|++|+++ .+|..++.+++|++|+|++|.|+ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46889999999998 88888999999999999999998 68888999999999999998888888887654
Q ss_pred CCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCc
Q 007935 136 LKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~ 214 (584)
+++|++|+|++|+++ .+|..+.++++|+ .|+|++|++++ +|..++.+++|+.|+|++|++.+.+|. +..+.++..+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~-~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLK-SLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCC-EEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCC-EEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 888999999999888 8888888888888 89999998884 666788888899999998888888874 4556667777
Q ss_pred ccCCCCCC
Q 007935 215 AFSGNPGL 222 (584)
Q Consensus 215 ~~~~n~~l 222 (584)
.+.+|...
T Consensus 259 ~L~~n~~~ 266 (328)
T 4fcg_A 259 ILKDCSNL 266 (328)
T ss_dssp ECTTCTTC
T ss_pred ECCCCCch
Confidence 77776543
No 276
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.78 E-value=1.2e-18 Score=168.27 Aligned_cols=138 Identities=22% Similarity=0.193 Sum_probs=128.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 57999999999999988989999999999999999999877778899999999999999999777777899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|+|++..|..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++...
T Consensus 139 s~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQ-TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred cCCcCCccCHHHcCcCcCCC-EEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 99999977777899999999 99999999998888899999999999999999998754
No 277
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.77 E-value=1.2e-18 Score=183.51 Aligned_cols=166 Identities=19% Similarity=0.202 Sum_probs=140.5
Q ss_pred CCCc--ceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 53 TPCH--WSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 53 ~~c~--w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
|.|. |..|.|.. .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 50 C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 50 CSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 4453 57888864 3689999999999999999999999999999999999988889999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecCCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|+ .|+|++| .+....+..|.++++|+.|+|++|++
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM-RLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCC-EEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCccc-EEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 999999977777899999999999999999966666888899998 9999884 55544455788889999999999988
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++. |.+..+.++..+.+++|.
T Consensus 209 ~~~-~~~~~l~~L~~L~Ls~N~ 229 (452)
T 3zyi_A 209 KDM-PNLTPLVGLEELEMSGNH 229 (452)
T ss_dssp SSC-CCCTTCTTCCEEECTTSC
T ss_pred ccc-ccccccccccEEECcCCc
Confidence 864 666667777777777775
No 278
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=2e-18 Score=168.77 Aligned_cols=140 Identities=26% Similarity=0.298 Sum_probs=130.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 57999999999999888888999999999999999999877777899999999999999999877778899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV 205 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 205 (584)
++|++++..|..+..+++|+ .|+|++|++++..|..|..+++|+.|+|++|.+++..|.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 224 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLK-DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 224 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCcCccCHHHhcCCccCC-EEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHH
Confidence 99999987777889999999 9999999999988888999999999999999999988853
No 279
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.77 E-value=4.4e-19 Score=180.53 Aligned_cols=166 Identities=25% Similarity=0.296 Sum_probs=141.4
Q ss_pred CCCCcceeeEecC-------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 007935 52 STPCHWSGIHCIR-------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118 (584)
Q Consensus 52 ~~~c~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 118 (584)
.++|.|.|+ |+. .+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 577899887 642 379999999999998877799999999999999999998778889999999999
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchH--HhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeec
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPE--FLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
+|++|++++..+..|.++++|++|+|++|+++ .+|. .+.++++|+ .|++++| .+++..|..|.++++|+.|++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ-ILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC-EEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc-EEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 99999999655555899999999999999999 5665 788999999 9999999 57777788999999999999999
Q ss_pred CCCccCCC-CCCCccccCCcccCCCC
Q 007935 196 NNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 196 N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|.+++..| .+..+.++..+.+.+|.
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CCcCccCHHHHhccccCCeecCCCCc
Confidence 99999866 34445555566666664
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.77 E-value=7.1e-19 Score=193.27 Aligned_cols=138 Identities=18% Similarity=0.146 Sum_probs=127.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999888899999999999999999999877778999999999999999999777778999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|+|++..+..|.++++|+ .|+|++|++++ .+|..++.+++|+.|+|++|+|++..|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~-~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCcCCCCChhhhhcCcccC-eeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99999976667899999999 99999999975 468899999999999999999998776
No 281
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.77 E-value=4.2e-19 Score=176.91 Aligned_cols=167 Identities=25% Similarity=0.333 Sum_probs=118.7
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEE
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYL 118 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L 118 (584)
.|.|.|.+|.|.. .+++.|+|++|+++...+..|..+++|++|+|++|.++. .+|..+..+++|++|
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 5779999999974 369999999999996555668999999999999999973 235666677777777
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch-HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP-EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 197 (584)
+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|+ .|++++|++++..|..|..+++|+.|+|++|.
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI-YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCC-EEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCC-EEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 77777776 456667777777777777777764433 4566677776 77777777776666667777777777777777
Q ss_pred Ccc-CCC-CCCCccccCCcccCCCC
Q 007935 198 LSG-EIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 198 l~~-~~p-~~~~~~~~~~~~~~~n~ 220 (584)
+++ .+| .+..+.++..+.+++|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSC
T ss_pred cccccchhHHhhCcCCCEEECCCCC
Confidence 665 233 33444555555555553
No 282
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.77 E-value=4.4e-19 Score=191.71 Aligned_cols=165 Identities=19% Similarity=0.224 Sum_probs=141.2
Q ss_pred CCCcceeeEecC-------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 53 TPCHWSGIHCIR-------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 53 ~~c~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
..|.|.|+ |+. .+++.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 2 ~~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 2 LSCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp CEECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 45889888 753 3799999999999999999999999999999999999998888999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCC-CchHHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~ 197 (584)
|++|++++..|..|+++++|++|+|++|.+++ .+|..+.++++|+ .|++++|++.+.+| ..|.++++|+.|++++|.
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~-~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ-TLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC-EEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc-EEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 99999998877789999999999999999986 4678899999999 99999999555554 689999999999999999
Q ss_pred CccCCCC-CCCccccCCcccCCC
Q 007935 198 LSGEIPQ-VGSLLNQGPTAFSGN 219 (584)
Q Consensus 198 l~~~~p~-~~~~~~~~~~~~~~n 219 (584)
+++.+|. +..+.++..+.+.+|
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECS
T ss_pred ccccChhhhhccccCceEecccC
Confidence 9997763 333444444444444
No 283
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.77 E-value=8.4e-19 Score=171.96 Aligned_cols=138 Identities=18% Similarity=0.136 Sum_probs=122.1
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35899999999999888888999999999999999998776778899999999999999999887788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccc-cCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|.+++..+..+..+++|+ .|++++|++++. +|..|.++++|+.|+|++|.+++..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCccccCchhcccCCCCC-EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99999876666788999999 999999999863 68899999999999999999988765
No 284
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=2.1e-18 Score=169.08 Aligned_cols=155 Identities=22% Similarity=0.209 Sum_probs=116.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|..+++|++|++++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46888888888888777778888888888888888888777777888888888888888888766667888888888888
Q ss_pred ccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCCc----EEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMV----SLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|.+++ .+|..+.++++|+ .|+|++|++++..+..|..+++|+ .|++++|.+++..+......++..+.+++|
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLE-HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCC-EEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred cCCccceecCchhhccCCCCC-EEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 8888875 3688888888888 888888888876666666655555 566666666665554333334444444444
Q ss_pred C
Q 007935 220 P 220 (584)
Q Consensus 220 ~ 220 (584)
.
T Consensus 211 ~ 211 (276)
T 2z62_A 211 Q 211 (276)
T ss_dssp C
T ss_pred c
Confidence 3
No 285
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=7e-18 Score=157.96 Aligned_cols=159 Identities=22% Similarity=0.215 Sum_probs=135.9
Q ss_pred eEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCC
Q 007935 60 IHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139 (584)
Q Consensus 60 v~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 139 (584)
..|.. +.+++++++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|
T Consensus 5 C~C~~---~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 78 (208)
T 2o6s_A 5 CSCSG---TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78 (208)
T ss_dssp CEEET---TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEECC---CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCc
Confidence 45643 578899999984 45444 4689999999999997666678899999999999999997766778999999
Q ss_pred CeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCC
Q 007935 140 THLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSG 218 (584)
Q Consensus 140 ~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~ 218 (584)
++|+|++|++++..+..+.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++.++. +..+.++..+.+.+
T Consensus 79 ~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 79 TYLNLSTNQLQSLPNGVFDKLTQLK-ELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCHhHhcCccCCC-EEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecC
Confidence 9999999999976667789999999 999999999988888899999999999999999987775 45677888889999
Q ss_pred CCCCCCC
Q 007935 219 NPGLCGF 225 (584)
Q Consensus 219 n~~l~~~ 225 (584)
|+..|..
T Consensus 158 N~~~~~~ 164 (208)
T 2o6s_A 158 NPWDCTC 164 (208)
T ss_dssp CCBCCCT
T ss_pred CCeecCC
Confidence 9876654
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.76 E-value=1.4e-18 Score=190.06 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=131.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47999999999999998999999999999999999999888889999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
++|.+++..|..+.++++|+ .|+|++|++++ .+|..|+++++|+.|+|++|.+++..|.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLK-KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCC-EEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred cCCccccccccccCCCCCCC-EEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99999977778899999999 99999999986 6799999999999999999999998773
No 287
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=184.50 Aligned_cols=164 Identities=22% Similarity=0.178 Sum_probs=144.5
Q ss_pred cceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc
Q 007935 56 HWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124 (584)
Q Consensus 56 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (584)
.|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888863 368899999999999889999999999999999999999889999999999999999999
Q ss_pred ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+++..+..|.++++|++|+|++|++++..|..|.++++|+ .|+|++|++++..|..|.++++|+.|+|++|.+++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK-SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCC-EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9976667789999999999999999988899999999999 999999999988899999999999999999999976552
Q ss_pred -CCCccccCCcccCCCC
Q 007935 205 -VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 205 -~~~~~~~~~~~~~~n~ 220 (584)
+..+.++..+.+.+|.
T Consensus 171 ~l~~l~~L~~L~l~~n~ 187 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLN 187 (477)
T ss_dssp HHTTCTTCCEEEEESCC
T ss_pred HhcccCCCcEEeCCCCc
Confidence 3445556666666664
No 288
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.76 E-value=1.4e-18 Score=158.37 Aligned_cols=139 Identities=24% Similarity=0.291 Sum_probs=118.1
Q ss_pred CCCCcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc
Q 007935 52 STPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD 131 (584)
Q Consensus 52 ~~~c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 131 (584)
.|.|+|.++.|.. ++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+.
T Consensus 4 ~C~C~~~~l~~~~----------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 4 RCSCSGTEIRCNS----------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp TCEEETTEEECCS----------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CCEeCCCEEEecC----------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 4668888777764 4444 344333 36899999999999976666788999999999999999977777
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
.|..+++|+.|+|++|+|++..+..+..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+++..|.
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLK-ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccC-EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 789999999999999999977777789999999 999999999977777789999999999999999987763
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.76 E-value=1.7e-18 Score=182.60 Aligned_cols=150 Identities=21% Similarity=0.242 Sum_probs=135.9
Q ss_pred CCccee--eEecC----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCC-cccccCCCCCCEEec
Q 007935 54 PCHWSG--IHCIR----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI-PANLFNATNLVYLDL 120 (584)
Q Consensus 54 ~c~w~g--v~c~~----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l 120 (584)
.|.|.+ +.|.. .+++.|+|++|++++..|..|+.+++|++|+|++|.+.+.+ |..|..+++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 455555 88864 35899999999999999999999999999999999998766 567899999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHH--hhccccCccEEEeccccCccccCcc-ccCCCCCcEEEeecCC
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEF--LLDLRALTGTLNLSFNQFSGQIPEM-YGHFPVMVSLDLRNNN 197 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~~l~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~ 197 (584)
++|++++..|..|.++++|++|+|++|++++.+|.. +.++++|+ .|+|++|++++..|.. +.++++|++|+|++|.
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE-MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC-EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC-EEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 999999888999999999999999999999877776 99999999 9999999999888876 8999999999999999
Q ss_pred CccCCCC
Q 007935 198 LSGEIPQ 204 (584)
Q Consensus 198 l~~~~p~ 204 (584)
+++..|.
T Consensus 166 l~~~~~~ 172 (455)
T 3v47_A 166 VKSICEE 172 (455)
T ss_dssp BSCCCTT
T ss_pred ccccChh
Confidence 9998874
No 290
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.75 E-value=1.7e-18 Score=172.40 Aligned_cols=154 Identities=23% Similarity=0.292 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 34556666666555 234445555555555555555554322 3455555555555555555555555555555555555
Q ss_pred cccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCC
Q 007935 144 LSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 144 ls~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~ 220 (584)
|++|.+++ .+|..+..+++|+ .|+|++|++++..|..|..+++|+.|+|++|.+++..+ .+..+.++..+.+++|.
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred CCCCccccccchhHHhhCcCCC-EEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 55555543 3445555555555 55555555554445555555555555555555554433 12233334444444443
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.75 E-value=1.5e-18 Score=182.86 Aligned_cols=161 Identities=21% Similarity=0.241 Sum_probs=141.0
Q ss_pred CCEEEEEcCCCCCcccCCccccC---------------------------------------CCCCCEEEccCCCCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGL---------------------------------------LNSLTRLSLASNNFSKPI 105 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~---------------------------------------l~~L~~L~l~~n~l~~~~ 105 (584)
.+++.|+|++|++++..|..+.. .++|+.|+|++|.+++..
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccc
Confidence 35888888888887665544322 268999999999999988
Q ss_pred cccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCC
Q 007935 106 PANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185 (584)
Q Consensus 106 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l 185 (584)
|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..+.++++|+ .|+|++|++++..|..|.++
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE-VLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC-EEECCSSCCCEECTTTTTTC
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC-EEECCCCcccccChhhcccc
Confidence 99999999999999999999988899999999999999999999988889999999999 99999999998889999999
Q ss_pred CCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 186 PVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 186 ~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
++|++|+|++|+|++.++. +..+.++..+.+.+|+..|..+
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999999999987764 3567778888999999877765
No 292
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.75 E-value=1.5e-18 Score=189.88 Aligned_cols=162 Identities=21% Similarity=0.181 Sum_probs=132.2
Q ss_pred CCEEEEEcCCCCCcccCC-ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC-CCCcccCCCCCCCee
Q 007935 65 NRVTSLYLPNRNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG-PIPDRIKTLKNLTHL 142 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L 142 (584)
.+++.|+|++|++.+..| ..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..|..+++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 456777777777777766 677888888888888888888788888888888888888888887 478888888999999
Q ss_pred ecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCcc-ccCCcccCCCCC
Q 007935 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLL-NQGPTAFSGNPG 221 (584)
Q Consensus 143 ~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~ 221 (584)
+|++|++++..|..+.++++|+ .|+|++|++++.+|..|.++++|+.|+|++|+|+..++.+..+. ++..+.+.+|+.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQ-LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCC-EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCC
T ss_pred ECCCCcCCccChhhhcccccCC-EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCc
Confidence 9999999888888888899998 89999999988888889999999999999999886555444444 467778889998
Q ss_pred CCCCCC
Q 007935 222 LCGFPL 227 (584)
Q Consensus 222 l~~~~~ 227 (584)
.|.++.
T Consensus 558 ~c~c~~ 563 (606)
T 3vq2_A 558 ACICEH 563 (606)
T ss_dssp CCSSTT
T ss_pred ccCCcc
Confidence 887654
No 293
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=5.8e-19 Score=195.76 Aligned_cols=178 Identities=21% Similarity=0.184 Sum_probs=118.4
Q ss_pred chHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCC------------------cc----
Q 007935 22 LNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNL------------------TG---- 79 (584)
Q Consensus 22 ~~~~~~~l~~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l------------------~~---- 79 (584)
.+.+.++|+++..+........-..|.......+.|.++.+..++++.|+|.+|++ .+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 34567889999888754433444567554445678988888766666666644443 22
Q ss_pred -----cCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCch
Q 007935 80 -----YMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLP 154 (584)
Q Consensus 80 -----~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 154 (584)
..+..+..++.|+.|+|++|.|. .+|..++.+++|++|+|++|+|+ .+|..|++|++|++|||++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23667888899999999999998 68888889999999999999999 88999999999999999999999 889
Q ss_pred HHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 155 EFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
..|.+|++|+ .|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|.
T Consensus 287 ~~~~~l~~L~-~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 287 AELGSCFQLK-YFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp SSGGGGTTCS-EEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred hhhcCCCCCC-EEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 9999999999 9999999998 7888899999999999999999998873
No 294
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.75 E-value=9e-19 Score=192.14 Aligned_cols=142 Identities=18% Similarity=0.300 Sum_probs=130.5
Q ss_pred CCcccCCccccCCCCCCEEEccCCCCCCC-----------------Cccccc--CCCCCCEEecCCCcccCCCCcccCCC
Q 007935 76 NLTGYMPSELGLLNSLTRLSLASNNFSKP-----------------IPANLF--NATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 76 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
+++| +|..|+++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4445 788999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCeeecccCC-CCC-CchHHhhcc------ccCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCCCC
Q 007935 137 KNLTHLDLSSNL-LNG-SLPEFLLDL------RALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQVG 206 (584)
Q Consensus 137 ~~L~~L~ls~N~-l~~-~~p~~~~~l------~~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~ 206 (584)
++|++|+|++|+ ++| .+|..++++ ++|+ .|+|++|+++ .+|. .++++++|+.|+|++|.++|.+|.+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~-~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ-IIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCC-EEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCC-EEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 999999999998 998 899999987 9999 9999999999 8998 99999999999999999999999766
Q ss_pred CccccCCcccCCCC
Q 007935 207 SLLNQGPTAFSGNP 220 (584)
Q Consensus 207 ~~~~~~~~~~~~n~ 220 (584)
.+.++..+.+++|.
T Consensus 351 ~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 351 SEIKLASLNLAYNQ 364 (636)
T ss_dssp EEEEESEEECCSSE
T ss_pred CCCCCCEEECCCCc
Confidence 67777777777774
No 295
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.75 E-value=2.4e-18 Score=187.50 Aligned_cols=176 Identities=15% Similarity=0.070 Sum_probs=144.9
Q ss_pred CCCCCCCCCCCCCCc---ceeeEecC------------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC
Q 007935 42 RALDSWSESDSTPCH---WSGIHCIR------------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN 100 (584)
Q Consensus 42 ~~l~~w~~~~~~~c~---w~gv~c~~------------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~ 100 (584)
..+.+|..+..|++. |.++.|.. ..++.|++++|.+....+..|..+++|++|+|++|.
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred ccccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 346788765444332 66655541 357889999999997777788999999999999999
Q ss_pred CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCc
Q 007935 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPE 180 (584)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~ 180 (584)
|++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+ .|+|++|.+++..|.
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~-~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT-TLSMSNNNLERIEDD 165 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCBCCTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC-EEEeeCCcCCCCChh
Confidence 9988888999999999999999999998888899999999999999999955555679999999 999999999999999
Q ss_pred cccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 181 MYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 181 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
.|+++++|+.|+|++|.+++..+ ..+.++..+.+.+|.
T Consensus 166 ~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNL 203 (597)
T ss_dssp TTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSC
T ss_pred hhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCc
Confidence 99999999999999999998643 455556556666653
No 296
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=7.9e-18 Score=156.11 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=130.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|+++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46899999999999 556 69999999999999997763 458999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEecccc-CccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQ-FSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..|..+..+++|+ .|+|++|+ ++ .+| .+..+++|+.|++++|.+++. +.+..+.++..+.+.+|+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~-~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVN-SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCC-EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred cCCccCcHhHHHHhhCCCCC-EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 99999988999999999999 99999998 55 566 689999999999999999974 456677777788888886
No 297
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.74 E-value=4e-18 Score=175.88 Aligned_cols=174 Identities=16% Similarity=0.081 Sum_probs=138.9
Q ss_pred CCCCCCCCCCCCcceeeEe---cC------------------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCC
Q 007935 44 LDSWSESDSTPCHWSGIHC---IR------------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFS 102 (584)
Q Consensus 44 l~~w~~~~~~~c~w~gv~c---~~------------------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 102 (584)
+++|.....|+|.|.+..| .. ..++.|++++|.++...+..|..+++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 5678776666666555444 20 46888999999998766667899999999999999999
Q ss_pred CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccc
Q 007935 103 KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMY 182 (584)
Q Consensus 103 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~ 182 (584)
+..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|.++++|+ .|+|++|++++..|..|
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~ 161 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT-TLSMSNNNLERIEDDTF 161 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCBCCTTTT
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc-EEECCCCccCccChhhc
Confidence 87777999999999999999999988888899999999999999999944444468999999 99999999998888899
Q ss_pred cCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 183 GHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 183 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
..+++|+.|++++|.+++.. ...+.++..+.+.+|.
T Consensus 162 ~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 162 QATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNL 197 (390)
T ss_dssp SSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSC
T ss_pred cCCCCCCEEECCCCcCCccc--cccccccceeeccccc
Confidence 99999999999999999753 2445555566666653
No 298
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.74 E-value=9.8e-18 Score=175.83 Aligned_cols=163 Identities=21% Similarity=0.227 Sum_probs=139.8
Q ss_pred cceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCc
Q 007935 56 HWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNS 124 (584)
Q Consensus 56 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 124 (584)
.|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 367888964 468999999999999989999999999999999999998778899999999999999999
Q ss_pred ccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 125 FCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++..+..|..+++|+.|+|++|.++...+..|.++++|+ .|+|++| .++...+..|.++++|+.|+|++|+++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~-~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR-RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC-EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC-EeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 9977677899999999999999999966666888999999 9999985 455444557888999999999999988 456
Q ss_pred CCCCccccCCcccCCCC
Q 007935 204 QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~n~ 220 (584)
.+..+.++..+.+++|.
T Consensus 202 ~~~~l~~L~~L~Ls~N~ 218 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNH 218 (440)
T ss_dssp CCTTCSSCCEEECTTSC
T ss_pred ccCCCcccCEEECCCCc
Confidence 67777777777777774
No 299
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=3.7e-18 Score=154.02 Aligned_cols=135 Identities=26% Similarity=0.251 Sum_probs=121.3
Q ss_pred CCEEEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46999999999998 88899999999999999999999975 7899999999999999999988888888899999999
Q ss_pred cccCCCCCCc-hHHhhccccCccEEEeccccCccccC---ccccCCCCCcEEEeecCCCccCC
Q 007935 144 LSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIP---EMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 144 ls~N~l~~~~-p~~~~~l~~L~~~l~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
|++|++++.. +..+..+++|+ .|++++|++++..+ ..+..+++|+.|++++|.++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLK-SLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCC-EEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccCcchhHHHHhcCCCCC-EEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 9999999532 27899999999 99999999996655 58999999999999999987544
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.73 E-value=1.3e-17 Score=175.50 Aligned_cols=161 Identities=21% Similarity=0.168 Sum_probs=113.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcc------------
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDR------------ 132 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~------------ 132 (584)
.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 45777777777777766677777777777777777777544455666666666666666665322211
Q ss_pred -----------------------------------cCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccc
Q 007935 133 -----------------------------------IKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ 177 (584)
Q Consensus 133 -----------------------------------~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~ 177 (584)
+..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|++++.
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~ 257 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLK-KLWVMNSQVSLI 257 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCC-EEECTTSCCCEE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCC-EEEeCCCcCceE
Confidence 23344555666666666666677788888888 888888888877
Q ss_pred cCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCCCCCCCCC
Q 007935 178 IPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 178 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~~ 226 (584)
.|..|.++++|+.|+|++|+|++.++.. ..+.++..+.+.+|+..|.+.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 7888888888888888888888766643 446667778889999888764
No 301
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.73 E-value=3e-17 Score=165.32 Aligned_cols=163 Identities=19% Similarity=0.279 Sum_probs=140.8
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|+.+.|.. ..++.|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 3557999999963 46889999999999888889999999999999999999888999999999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc--cccCccccCCCCCcEEEeecCCC
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS--GQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
++|+++ .+|..+. ++|++|+|++|.+++..+..+.++++|+ .|++++|+++ +..+..|.++++|+.|++++|.+
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMI-VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCC-EEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCcccc-EEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999998 6776665 7999999999999988888899999999 9999999996 47788999999999999999999
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+..+... ..++..+.+++|.
T Consensus 184 ~~l~~~~--~~~L~~L~l~~n~ 203 (330)
T 1xku_A 184 TTIPQGL--PPSLTELHLDGNK 203 (330)
T ss_dssp CSCCSSC--CTTCSEEECTTSC
T ss_pred ccCCccc--cccCCEEECCCCc
Confidence 8654322 2456666666664
No 302
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.73 E-value=8.3e-18 Score=186.55 Aligned_cols=167 Identities=22% Similarity=0.192 Sum_probs=143.3
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
|.|.+..+.|.. .+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 445555666642 479999999999998888899999999999999999999889999999999999999
Q ss_pred CCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
+|++++..+..|.++++|++|+|++|++++..|..|.++++|+ .|+|++|++++..|..++++++|+.|+|++|.+++.
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLI-TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCC-EEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCC-EEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 9999965556799999999999999999977778999999999 999999999999999999999999999999999987
Q ss_pred CCCC---CCccccCCcccCCCC
Q 007935 202 IPQV---GSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 ~p~~---~~~~~~~~~~~~~n~ 220 (584)
.|.. ....++..+.+++|.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCC
T ss_pred CHHHhhccccccccEEECCCCc
Confidence 7631 122455666666664
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=174.43 Aligned_cols=159 Identities=25% Similarity=0.268 Sum_probs=123.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-------------------------ccCCCCCCEEe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-------------------------LFNATNLVYLD 119 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-------------------------~~~l~~L~~L~ 119 (584)
.+++.|+|++|+|++..+..|..+++|++|+|++|.|+...+.. |.++++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 191 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN 191 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeec
Confidence 46888888888888766777888888888888888887543433 44455666666
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
|++|+++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|+|+
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ-KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCC-EEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCC-EEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 6666665 344 366777888888888888877788888888888 8999999998888888999999999999999999
Q ss_pred cCCCC-CCCccccCCcccCCCCCCCCCC
Q 007935 200 GEIPQ-VGSLLNQGPTAFSGNPGLCGFP 226 (584)
Q Consensus 200 ~~~p~-~~~~~~~~~~~~~~n~~l~~~~ 226 (584)
+.++. +..+.++..+.+.+|+..|.+.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 87764 3456677788899999888764
No 304
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.72 E-value=5.8e-18 Score=162.20 Aligned_cols=167 Identities=15% Similarity=0.200 Sum_probs=138.0
Q ss_pred CCCCcc-ee--eEecC--------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCCCCCCEEe
Q 007935 52 STPCHW-SG--IHCIR--------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w-~g--v~c~~--------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.+ .+ |.|.. ..++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+
T Consensus 7 ~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~ 86 (239)
T 2xwt_C 7 PCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86 (239)
T ss_dssp SCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE
T ss_pred CCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE
Confidence 455644 44 44853 579999999999998888899999999999999997 8876666899999999999
Q ss_pred cCC-CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCc--cEEEeccc-cCccccCccccCCCCCc-EEEee
Q 007935 120 LAH-NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT--GTLNLSFN-QFSGQIPEMYGHFPVMV-SLDLR 194 (584)
Q Consensus 120 l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~--~~l~l~~N-~l~~~~p~~~~~l~~L~-~L~l~ 194 (584)
|++ |++++..+..|.++++|+.|+|++|++++ +|. +..+++|+ ..|++++| ++++..+..|.++++|+ .|+++
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 999 99997777889999999999999999995 776 77777664 28999999 99987788899999999 99999
Q ss_pred cCCCccCCCCCCCccccCCcccCCCC
Q 007935 195 NNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 195 ~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+|.++...+......++..+.+.+|.
T Consensus 165 ~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 165 NNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp SCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred CCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 99999554433333456666777774
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.72 E-value=3.2e-18 Score=170.89 Aligned_cols=154 Identities=22% Similarity=0.208 Sum_probs=118.4
Q ss_pred CCEEEEEcCCCCCcccCCccc--cCCCCCCEEEccCCCCCCCCcccccCC-----CCCCEEecCCCcccCCCCcccCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL--GLLNSLTRLSLASNNFSKPIPANLFNA-----TNLVYLDLAHNSFCGPIPDRIKTLK 137 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~ 137 (584)
.+++.|+|++|++++.+|..+ +.+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 468888888888888888776 8888888888888888875 7777766 8888888888888877778888888
Q ss_pred CCCeeecccCCCCCC--chHHh--hccccCccEEEeccccCcc--cc-CccccCCCCCcEEEeecCCCccCCC--CCCCc
Q 007935 138 NLTHLDLSSNLLNGS--LPEFL--LDLRALTGTLNLSFNQFSG--QI-PEMYGHFPVMVSLDLRNNNLSGEIP--QVGSL 208 (584)
Q Consensus 138 ~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~~l~l~~N~l~~--~~-p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~ 208 (584)
+|++|+|++|++++. +|..+ ..+++|+ .|+|++|+|++ .+ ...+.++++|+.|+|++|.+++.+| .+..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQ-VLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCC-EEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCC-EEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 888888888888765 34555 7788888 88888888873 22 2445677888888888888888664 33345
Q ss_pred cccCCcccCCCC
Q 007935 209 LNQGPTAFSGNP 220 (584)
Q Consensus 209 ~~~~~~~~~~n~ 220 (584)
.++..+.+++|.
T Consensus 253 ~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 253 SQLNSLNLSFTG 264 (312)
T ss_dssp TTCCEEECTTSC
T ss_pred CCCCEEECCCCc
Confidence 566667777765
No 306
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=2.2e-17 Score=152.41 Aligned_cols=128 Identities=24% Similarity=0.320 Sum_probs=114.6
Q ss_pred EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCC
Q 007935 69 SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNL 148 (584)
Q Consensus 69 ~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 148 (584)
.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4667777777 5566553 58999999999998 688999999999999999999998888899999999999999999
Q ss_pred CCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 149 LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 149 l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
|++..|..|.++++|+ .|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLR-LLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCC-EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCC-EEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9988888999999999 999999999977777899999999999999998754
No 307
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.72 E-value=5.1e-18 Score=149.85 Aligned_cols=128 Identities=26% Similarity=0.275 Sum_probs=109.8
Q ss_pred CCEEEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 78888889999999999999999875 6788899999999999999987888888899999999
Q ss_pred cccCCCCCC-chHHhhccccCccEEEeccccCccccC---ccccCCCCCcEEEeec
Q 007935 144 LSSNLLNGS-LPEFLLDLRALTGTLNLSFNQFSGQIP---EMYGHFPVMVSLDLRN 195 (584)
Q Consensus 144 ls~N~l~~~-~p~~~~~l~~L~~~l~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 195 (584)
|++|.+++. .|..+..+++|+ .|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLK-SLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCC-EEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCC-EEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999853 347888999999 99999999987665 5788899999998764
No 308
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=179.25 Aligned_cols=158 Identities=23% Similarity=0.267 Sum_probs=139.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCcc-cCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPDR-IKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~ 141 (584)
..++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 578999999999999999999999999999999999997 56788999999999999999999867764 888999999
Q ss_pred eecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 142 L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|+|++|++++.+|..+. ++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|+|+..++. +..+.++..+.+.+|+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~-~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIK-VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCC-EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCcchhhhhc--ccCC-EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 99999999988887664 6888 9999999999 8888888999999999999999965554 5567778888999999
Q ss_pred CCCCCC
Q 007935 221 GLCGFP 226 (584)
Q Consensus 221 ~l~~~~ 226 (584)
..|.++
T Consensus 480 ~~c~c~ 485 (520)
T 2z7x_B 480 WDCSCP 485 (520)
T ss_dssp BCCCHH
T ss_pred CcccCC
Confidence 888654
No 309
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.72 E-value=8.2e-18 Score=190.71 Aligned_cols=70 Identities=20% Similarity=0.291 Sum_probs=45.4
Q ss_pred hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC--------------------CCccccCCccc
Q 007935 157 LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV--------------------GSLLNQGPTAF 216 (584)
Q Consensus 157 ~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--------------------~~~~~~~~~~~ 216 (584)
|.++++|+ .|+|++|+|++.+|..|.++++|+.|+|++|+|++.+|.. ..+.++..+.+
T Consensus 476 ~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l 554 (844)
T 3j0a_A 476 FEGLSHLQ-VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDI 554 (844)
T ss_dssp SSCBCCEE-CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEE
T ss_pred hcCccccc-EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEe
Confidence 44556666 6777777777666766777777777777777766654422 12334556677
Q ss_pred CCCCCCCCCCC
Q 007935 217 SGNPGLCGFPL 227 (584)
Q Consensus 217 ~~n~~l~~~~~ 227 (584)
.+|+..|.++.
T Consensus 555 ~~Np~~C~c~~ 565 (844)
T 3j0a_A 555 THNKFICECEL 565 (844)
T ss_dssp EEECCCCSSSC
T ss_pred cCCCccccccc
Confidence 88998887653
No 310
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=5.2e-18 Score=189.93 Aligned_cols=138 Identities=17% Similarity=0.237 Sum_probs=128.0
Q ss_pred CCccccCCCCCCEEEccCCCCCC-----------------CCccccc--CCCCCCEEecCCCcccCCCCcccCCCCCCCe
Q 007935 81 MPSELGLLNSLTRLSLASNNFSK-----------------PIPANLF--NATNLVYLDLAHNSFCGPIPDRIKTLKNLTH 141 (584)
Q Consensus 81 ~~~~~~~l~~L~~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 141 (584)
+|..|++|++|+.|+|++|+|+| .+|..++ ++++|++|+|++|++.+.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78899999999999999999998 3999988 9999999999999999999999999999999
Q ss_pred eecccCC-CCC-CchHHhhccc-------cCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCCCCCccc
Q 007935 142 LDLSSNL-LNG-SLPEFLLDLR-------ALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210 (584)
Q Consensus 142 L~ls~N~-l~~-~~p~~~~~l~-------~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (584)
|+|++|+ |+| .+|..+.+++ +|+ .|+|++|+|+ .+|. .|+++++|+.|+|++|.++ .+|.+..+.+
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~-~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQ-IFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCC-EEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCcc-EEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCc
Confidence 9999998 998 8999999887 999 9999999999 8898 9999999999999999999 7887777888
Q ss_pred cCCcccCCCCC
Q 007935 211 QGPTAFSGNPG 221 (584)
Q Consensus 211 ~~~~~~~~n~~ 221 (584)
+..+.+++|..
T Consensus 597 L~~L~Ls~N~l 607 (876)
T 4ecn_A 597 LTDLKLDYNQI 607 (876)
T ss_dssp ESEEECCSSCC
T ss_pred ceEEECcCCcc
Confidence 88888888863
No 311
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=1.7e-17 Score=179.73 Aligned_cols=158 Identities=24% Similarity=0.266 Sum_probs=139.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCc-ccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPD-RIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~ 141 (584)
.+++.|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 579999999999999999999999999999999999997 3457789999999999999999986665 5889999999
Q ss_pred eecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCC
Q 007935 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 142 L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~ 220 (584)
|+|++|++++.+|..+. ++|+ .|+|++|+|+ .+|..+.++++|+.|+|++|+|++.++. +..+.++..+.+.+|+
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~-~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVK-VLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCS-EEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred EECCCCCCCcchhhhhc--CcCC-EEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 99999999988776554 6888 9999999999 7888777999999999999999976554 6677778888999999
Q ss_pred CCCCCC
Q 007935 221 GLCGFP 226 (584)
Q Consensus 221 ~l~~~~ 226 (584)
..|.++
T Consensus 509 ~~c~c~ 514 (562)
T 3a79_B 509 WDCTCP 514 (562)
T ss_dssp BCCCHH
T ss_pred cCCCcc
Confidence 888754
No 312
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.72 E-value=9.9e-18 Score=183.34 Aligned_cols=155 Identities=19% Similarity=0.083 Sum_probs=134.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999998999999999999999999999988999999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccC--CcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQG--PTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~--~~~~~~n~ 220 (584)
++|++++..|..+.++++|+ .|+|++|++++..+..+..+++|+.|+|++|.+++..|. +..+.++. .+.+.+|.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLE-SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCC-EEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCC
T ss_pred cccCcccCCcchhccCCccc-EEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCc
Confidence 99999976688899999999 999999999975444455599999999999999987662 33344444 45566664
No 313
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.71 E-value=4.4e-17 Score=164.18 Aligned_cols=161 Identities=19% Similarity=0.272 Sum_probs=138.3
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
|.|.|..+.|.. ..++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 458899999963 368999999999998888899999999999999999998889999999999999999
Q ss_pred CCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc--cccCccccCCCCCcEEEeecCCCc
Q 007935 122 HNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS--GQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 122 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+ .|++++|+++ +..|..|..+ +|+.|++++|.++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN-CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC-EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCC-EEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 99998 6776665 8999999999999976667799999999 9999999996 4778888888 9999999999999
Q ss_pred cCCCCCCCccccCCcccCCCC
Q 007935 200 GEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 200 ~~~p~~~~~~~~~~~~~~~n~ 220 (584)
+.+... ..++..+.+++|.
T Consensus 186 ~l~~~~--~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 186 GIPKDL--PETLNELHLDHNK 204 (332)
T ss_dssp SCCSSS--CSSCSCCBCCSSC
T ss_pred ccCccc--cCCCCEEECCCCc
Confidence 754422 2456666777764
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=189.13 Aligned_cols=165 Identities=24% Similarity=0.250 Sum_probs=141.8
Q ss_pred CcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCC-cccccCCCCCCEEecCCCcccCCCCccc
Q 007935 55 CHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPI-PANLFNATNLVYLDLAHNSFCGPIPDRI 133 (584)
Q Consensus 55 c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 133 (584)
|.|..|.+...+++.|+|++|++++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 567777765578999999999999999999999999999999999777766 7889999999999999999998889999
Q ss_pred CCCCCCCeeecccCCCCCCchHH--hhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCCC-CCc-
Q 007935 134 KTLKNLTHLDLSSNLLNGSLPEF--LLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQV-GSL- 208 (584)
Q Consensus 134 ~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~- 208 (584)
.++++|++|+|++|.+++.+|.. +.++++|+ .|+|++|++++..+ ..|+++++|++|+|++|.+++..|.. ..+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~-~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT-RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC-EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCC-EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 99999999999999999877776 89999999 99999999987755 68999999999999999999877632 222
Q ss_pred -cccCCcccCCCC
Q 007935 209 -LNQGPTAFSGNP 220 (584)
Q Consensus 209 -~~~~~~~~~~n~ 220 (584)
.++..+.+.+|.
T Consensus 173 ~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 173 GKTLSFFSLAANS 185 (844)
T ss_dssp HCSSCCCEECCSB
T ss_pred CCccceEECCCCc
Confidence 345555555554
No 315
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.70 E-value=1.5e-17 Score=181.82 Aligned_cols=138 Identities=22% Similarity=0.214 Sum_probs=92.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|+|++|++.+..|..|..+++|+.|+|++|.+++..|.. +..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 46777777777777777777777777777777777776655443 66677777777777777766666666667777777
Q ss_pred cccCCCCCC---chHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC
Q 007935 144 LSSNLLNGS---LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 144 ls~N~l~~~---~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++|.+++. .+..+..+++|+ .|+|++|++++..|..|.++++|+.|+|++|++++.+|
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLE-ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGG
T ss_pred CCCCCCCccccccchhhccCCCcc-EEECCCCccCccChhhhccccCCCEEECCCCccCcCCh
Confidence 777666542 224566666666 66666666666666666666666666666666666554
No 316
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.6e-17 Score=153.25 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=116.8
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCc-cccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEe
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPS-ELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLD 119 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 119 (584)
.|.|.|+.+.|.. .+++.|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 4678999999974 3789999999999987765 599999999999999999998899999999999999
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP 179 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p 179 (584)
|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+ .|+|++|++++..+
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT-SLNLASNPFNCNCH 143 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC-EEECTTCCBCCSGG
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC-EEEeCCCCccCcCc
Confidence 999999998888899999999999999999998999999999999 99999999997654
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.70 E-value=8.1e-18 Score=168.00 Aligned_cols=152 Identities=20% Similarity=0.128 Sum_probs=124.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCC-----CCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCC--CCccc--CC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLL-----NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGP--IPDRI--KT 135 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~~ 135 (584)
.+++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 5799999999999988 8888877 8999999999999988788999999999999999998765 34444 88
Q ss_pred CCCCCeeecccCCCCC--Cch-HHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCCCCCcccc
Q 007935 136 LKNLTHLDLSSNLLNG--SLP-EFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQ 211 (584)
Q Consensus 136 l~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 211 (584)
+++|++|+|++|+|++ .++ ..+.++++|+ .|+|++|++++.+| ..+..+++|+.|+|++|.|+ .+|.... .++
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQ-GLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCS-EEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCC-EEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCc
Confidence 9999999999999983 223 3345778999 99999999998775 56677899999999999999 5553222 566
Q ss_pred CCcccCCCC
Q 007935 212 GPTAFSGNP 220 (584)
Q Consensus 212 ~~~~~~~n~ 220 (584)
..+.+++|.
T Consensus 277 ~~L~Ls~N~ 285 (312)
T 1wwl_A 277 SVLDLSYNR 285 (312)
T ss_dssp EEEECCSSC
T ss_pred eEEECCCCC
Confidence 677777775
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=1.3e-17 Score=176.89 Aligned_cols=150 Identities=21% Similarity=0.133 Sum_probs=105.0
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc----------------cccCCCCCCEEecCCCcccCCC
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA----------------NLFNATNLVYLDLAHNSFCGPI 129 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~----------------~~~~l~~L~~L~l~~N~l~~~~ 129 (584)
.++.|+|++|++++..| |+.+++|++|+|++|.|++..+. ....+++|+.|+|++|++++..
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~ 136 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLR 136 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGG
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCC
Confidence 45556666666555443 55555555555555554431110 0012345666666666666666
Q ss_pred CcccCCCCCCCeeecccCCCCCCchHHhh-ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCc
Q 007935 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208 (584)
Q Consensus 130 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 208 (584)
|..|+.+++|+.|+|++|.|++.+|..+. .+++|+ .|+|++|.|++..+ +..+++|+.|+|++|.|++.+|.+..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~-~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l 213 (487)
T 3oja_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE-HLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSA 213 (487)
T ss_dssp GBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCC-EEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGG
T ss_pred chhhcCCCCCCEEECCCCCCCCcChHHHhhhCCccc-EEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCC
Confidence 77778888888888888888887787776 688888 88888888886633 345899999999999999998887778
Q ss_pred cccCCcccCCCC
Q 007935 209 LNQGPTAFSGNP 220 (584)
Q Consensus 209 ~~~~~~~~~~n~ 220 (584)
.++..+.+++|.
T Consensus 214 ~~L~~L~Ls~N~ 225 (487)
T 3oja_A 214 AGVTWISLRNNK 225 (487)
T ss_dssp TTCSEEECTTSC
T ss_pred CCccEEEecCCc
Confidence 888888888886
No 319
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.69 E-value=8e-17 Score=164.18 Aligned_cols=156 Identities=26% Similarity=0.213 Sum_probs=133.3
Q ss_pred eeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCC
Q 007935 58 SGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTL 136 (584)
Q Consensus 58 ~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l 136 (584)
....|.. ..+++++++|+. +|..+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..|..|.++
T Consensus 14 ~~C~C~~---~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 3567764 478999999984 676554 4689999999999987777777 99999999999999998878889999
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCC----CCccccC
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV----GSLLNQG 212 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~~ 212 (584)
++|++|+|++|+|++..+..|.++++|+ .|+|++|+|++..|..|.++++|+.|+|++|.|++..+.. ..+.++.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALE-VLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCC-EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCC-EEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCC
Confidence 9999999999999977777899999999 9999999999888999999999999999999999866543 3456677
Q ss_pred CcccCCCC
Q 007935 213 PTAFSGNP 220 (584)
Q Consensus 213 ~~~~~~n~ 220 (584)
.+.+++|.
T Consensus 167 ~L~L~~N~ 174 (361)
T 2xot_A 167 LLDLSSNK 174 (361)
T ss_dssp EEECCSSC
T ss_pred EEECCCCC
Confidence 77777775
No 320
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.69 E-value=2.8e-17 Score=178.34 Aligned_cols=158 Identities=22% Similarity=0.300 Sum_probs=89.9
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP-ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
+++.|+|++|++.+..+. +..+++|+.|++++|.+.+..| ..+..+++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 452 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEEC
Confidence 344555555555433222 5555555555555555555433 34555566666666666666555555666666666666
Q ss_pred ccCCCC-CCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCC-CCCccccCCcccCCCCCC
Q 007935 145 SSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VGSLLNQGPTAFSGNPGL 222 (584)
Q Consensus 145 s~N~l~-~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~l 222 (584)
++|.++ +.+|..+..+++|+ .|+|++|++++..|..|.++++|+.|+|++|.+++.+|. +..+.++..+.+.+|+..
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCCcCccccchhhhhcccCCC-EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 666665 45566666666666 666666666655566666666666666666666665553 334445555556666555
Q ss_pred CCC
Q 007935 223 CGF 225 (584)
Q Consensus 223 ~~~ 225 (584)
|..
T Consensus 532 ~~~ 534 (570)
T 2z63_A 532 CSC 534 (570)
T ss_dssp CCT
T ss_pred CCC
Confidence 443
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.69 E-value=2.9e-18 Score=184.49 Aligned_cols=151 Identities=8% Similarity=-0.134 Sum_probs=99.2
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCC---------cchhhHhHHHHHHHHHhc-CCCceeeeeEEEEeCC
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---------ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~---------~~~~~~~f~~Ei~~l~~l-~HpnIV~l~g~~~~~~ 418 (584)
..+.|++|.++.++..-.+ ..+|||.+.... .....++|.+|+++|+++ +|+||+++++++++++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg-----~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFG-----EDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ 315 (569)
T ss_dssp C-C--------CCEEEEEC-----SSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS
T ss_pred ccccCCccccccccccccc-----ceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC
Confidence 4556666666655443333 679999997641 122346799999999999 7999999999999999
Q ss_pred ceeEeeecccCCcHHHHHh----------------------cc--cccccCCCCccccccCeEEecCCCccc--------
Q 007935 419 EKLLISDFIRNGSLYAALH----------------------GF--GLNRLLPGTSKVTKNETIVTSGTGSRI-------- 466 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~~~L~----------------------~~--g~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 466 (584)
+.||||||++||+|.++|. +. -|+|++++|+.+..++.++..|||...
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~ 395 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC
T ss_pred EEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc
Confidence 9999999999999976664 33 379999999999999999999998432
Q ss_pred ---ccCCCcccCccccccCCCCCCccchhhHHHHHHHHHhCCC
Q 007935 467 ---SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 506 (584)
Q Consensus 467 ---~~gt~~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~ 506 (584)
.+||+.|||||++ .+ .+..++|+||+|++++++.++..
T Consensus 396 ~~t~vGTp~YmAPE~l-~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 396 PTNLVQSFFVFVNELF-AE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp SHHHHHHHHHHHHHHC-------------------CCCCTTHH
T ss_pred ccCceechhhccHHHh-CC-CCCCcccccccccchhhhccccc
Confidence 3689999999985 43 57789999999999887766543
No 322
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.68 E-value=6.7e-17 Score=171.40 Aligned_cols=156 Identities=21% Similarity=0.188 Sum_probs=138.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 57999999999999998999999999999999999999755566889999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCC-CCCCccccCCcccCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNPG 221 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~~ 221 (584)
++|.+++..|..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|.+++..+ .+..+.++..+.+++|+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLE-QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCC-EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred CCCccceeChhhccCCCCCC-EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 99999988888999999999 99999999998777789999999999999999998766 344555666667776653
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.68 E-value=2.4e-17 Score=164.41 Aligned_cols=152 Identities=18% Similarity=0.108 Sum_probs=120.4
Q ss_pred CCEEEEEcCCCCCcccCC----ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCC--C--CcccCCC
Q 007935 65 NRVTSLYLPNRNLTGYMP----SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGP--I--PDRIKTL 136 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l 136 (584)
.+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++.+. + +..+..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 468899999999987665 4556788999999999999887788888999999999999998652 2 2334688
Q ss_pred CCCCeeecccCCCCCCchH----HhhccccCccEEEeccccCccccCccccCC---CCCcEEEeecCCCccCCCCCCCcc
Q 007935 137 KNLTHLDLSSNLLNGSLPE----FLLDLRALTGTLNLSFNQFSGQIPEMYGHF---PVMVSLDLRNNNLSGEIPQVGSLL 209 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~ 209 (584)
++|++|+|++|+++ .+|. .+.++++|+ .|+|++|+|++..|+.+..+ ++|+.|+|++|.|+. +|... ..
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~-~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~-~~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPH-SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGL-PA 272 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCS-SEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCC-CS
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCC-EEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhh-cC
Confidence 89999999999997 5554 257788998 99999999998878888777 689999999999994 45322 25
Q ss_pred ccCCcccCCCC
Q 007935 210 NQGPTAFSGNP 220 (584)
Q Consensus 210 ~~~~~~~~~n~ 220 (584)
++..+.+++|.
T Consensus 273 ~L~~L~Ls~N~ 283 (310)
T 4glp_A 273 KLRVLDLSSNR 283 (310)
T ss_dssp CCSCEECCSCC
T ss_pred CCCEEECCCCc
Confidence 67777777776
No 324
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.68 E-value=1.5e-16 Score=173.31 Aligned_cols=110 Identities=20% Similarity=0.197 Sum_probs=68.6
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|++++..|..|+.+++|++|+|++|.|++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 56666666666666666666666666666666666666555556666666666666666664444445666666666666
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
+|.+++..|..|.++++|+ .|+|++|.+++
T Consensus 156 ~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~ 185 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQ-NLQLSSNRLTH 185 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCC-EEECTTSCCSB
T ss_pred CCcCCCCChhhhhcCCcCc-EEECcCCCCCC
Confidence 6666655555566666665 66666555543
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.68 E-value=1.8e-16 Score=156.22 Aligned_cols=157 Identities=24% Similarity=0.245 Sum_probs=141.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 5799999999999975443 88999999999999998 58989999999999999999999877788999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCG 224 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 224 (584)
++|+|++..+..|..+++|+ .|+|++|+|++..+..|..+++|+.|+|++|+|+..++.+.....+..+.+.+|+..|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLE-KLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCC-EEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCC-EEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 99999977777788999999 99999999997777788999999999999999997766666666778888999999887
Q ss_pred C
Q 007935 225 F 225 (584)
Q Consensus 225 ~ 225 (584)
+
T Consensus 211 c 211 (290)
T 1p9a_G 211 C 211 (290)
T ss_dssp G
T ss_pred C
Confidence 5
No 326
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.68 E-value=9.6e-17 Score=177.98 Aligned_cols=159 Identities=26% Similarity=0.267 Sum_probs=113.0
Q ss_pred EEEEEcCCCCCc--ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCC--------cccCCC
Q 007935 67 VTSLYLPNRNLT--GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIP--------DRIKTL 136 (584)
Q Consensus 67 v~~l~l~~~~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l 136 (584)
++.|++++|.+. +.+|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+ ..|.++
T Consensus 456 L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l 535 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535 (680)
T ss_dssp CCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTC
T ss_pred cccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCC
Confidence 444444444443 3456677777778888888887776666667777888888888887765321 236777
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCC--CccccCCc
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVG--SLLNQGPT 214 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~ 214 (584)
++|+.|+|++|+++...+..|.++++|+ .|+|++|++++..+..|.++++|+.|+|++|.|++.+|... .+.++..+
T Consensus 536 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 536 SHLHILNLESNGFDEIPVEVFKDLFELK-IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCEEECCCCCCCCCCHHHcccccCcc-eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 8888888888888733334578888888 88888888887666777888888888888888887766321 35567777
Q ss_pred ccCCCCCCCCCC
Q 007935 215 AFSGNPGLCGFP 226 (584)
Q Consensus 215 ~~~~n~~l~~~~ 226 (584)
.+.+|+..|+++
T Consensus 615 ~l~~N~~~c~c~ 626 (680)
T 1ziw_A 615 DMRFNPFDCTCE 626 (680)
T ss_dssp ECTTCCCCBCCC
T ss_pred EccCCCcccCCc
Confidence 888999888765
No 327
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=147.31 Aligned_cols=123 Identities=28% Similarity=0.338 Sum_probs=111.6
Q ss_pred CCCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEec
Q 007935 52 STPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (584)
Q Consensus 52 ~~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 120 (584)
.|.|.|..+.|.. ..++.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..|..|.++++|++|+|
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEEC
Confidence 4667888888864 36899999999998 77899999999999999999999887888999999999999
Q ss_pred CCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCcc
Q 007935 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG 176 (584)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~ 176 (584)
++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+ .|+|++|++..
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~~~C 140 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS-HLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCC-EEECCSSCEEC
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcccc-EEEeCCCCeec
Confidence 99999988888999999999999999999966666789999999 99999999974
No 328
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.67 E-value=8e-17 Score=172.36 Aligned_cols=152 Identities=30% Similarity=0.462 Sum_probs=123.2
Q ss_pred CCCCCCCCCCC-----cceee-EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 007935 45 DSWSESDSTPC-----HWSGI-HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYL 118 (584)
Q Consensus 45 ~~w~~~~~~~c-----~w~gv-~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 118 (584)
.+|.. +..|| .|.|+ .|...+++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 35643 34567 79999 7987789999999999997 777663 78999999999998 578 457899999
Q ss_pred ecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 119 DLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 119 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+ .|+|++|+|++ +|. .+++|+.|+|++|.|
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~-~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLE-YINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCC-EEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCcccc-EEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 999999997 777 665 89999999999986 776 678888 99999999986 665 578899999999999
Q ss_pred ccCCCCCCCccccCCcccCCCC
Q 007935 199 SGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++ +|.+. .++..+.+++|.
T Consensus 173 ~~-lp~l~--~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 173 TF-LPELP--ESLEALDVSTNL 191 (571)
T ss_dssp SC-CCCCC--TTCCEEECCSSC
T ss_pred CC-cchhh--CCCCEEECcCCC
Confidence 88 55433 566667777775
No 329
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.67 E-value=1.2e-16 Score=175.59 Aligned_cols=171 Identities=19% Similarity=0.198 Sum_probs=129.8
Q ss_pred CCCCCCCCCCCCCcceeeEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCC
Q 007935 43 ALDSWSESDSTPCHWSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH 122 (584)
Q Consensus 43 ~l~~w~~~~~~~c~w~gv~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 122 (584)
.+++|..+ .|..|....|.... +..+-++.+|+ .+|..+. +++++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~~~~~~~~--~p~~~~~c~~~~~~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~ 85 (635)
T 4g8a_A 12 KLAAANSS--IPESWEPCVEVVPN-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 85 (635)
T ss_dssp ---------------CCSEEEETT-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred hhhcccCC--CCCCCCCccccCCC-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCC
Confidence 45556432 34445444443222 23466677777 5676553 4799999999999987778899999999999999
Q ss_pred CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccC-
Q 007935 123 NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE- 201 (584)
Q Consensus 123 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~- 201 (584)
|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|+ .|+|++|+|++..+..|+++++|++|+|++|.+++.
T Consensus 86 N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~-~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~ 164 (635)
T 4g8a_A 86 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ-KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 164 (635)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCC-EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCC-EEECCCCcCCCCChhhhhcCcccCeeccccCccccCC
Confidence 999987788899999999999999999966667899999999 999999999988788899999999999999999863
Q ss_pred CCC-CCCccccCCcccCCCC
Q 007935 202 IPQ-VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 202 ~p~-~~~~~~~~~~~~~~n~ 220 (584)
+|. +..+.++..+.+.+|.
T Consensus 165 ~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 165 LPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp CCGGGGGCTTCCEEECCSSC
T ss_pred CchhhccchhhhhhcccCcc
Confidence 453 3445667777777775
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=173.71 Aligned_cols=138 Identities=18% Similarity=0.146 Sum_probs=125.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999877888999999999999999999888889999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
++|++++..+..+.++++|+ .|++++|++++ .+|..|+++++|+.|++++|.+++..|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~-~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLK-ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCC-EEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred cccccccCCCcccccccccc-EEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 99999965555799999999 99999999987 479999999999999999999998766
No 331
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=161.38 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=109.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCc--ccCCCCCCCee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD--RIKTLKNLTHL 142 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L 142 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++ +|. .|..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 579999999999998888899999999999999999997545558899999999999999984 554 78889999999
Q ss_pred ecccCC-CCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 143 DLSSNL-LNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 143 ~ls~N~-l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+|++|+ +++..|..+.++++|+ .|++++|++++..|..|..+++|++|++++|.++
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLE-ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEE-EEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred ECCCCccccccCHHHccCCCCCC-EEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 999984 6655567888888888 8999999888887888877666666666655543
No 332
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=3.5e-16 Score=157.41 Aligned_cols=151 Identities=22% Similarity=0.277 Sum_probs=75.4
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC--CCCcccCCCCC-----
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG--PIPDRIKTLKN----- 138 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~----- 138 (584)
+++.|+|++|+++ .+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|+++. ..+..|.++++
T Consensus 101 ~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 101 KLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp TCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 4666666666665 3333332 455555555555554444444555555555555555532 33444444444
Q ss_pred ----------------CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 139 ----------------LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 139 ----------------L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
|+.|+|++|++++..|..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.++..+
T Consensus 178 l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 256 (330)
T 1xku_A 178 IADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLA-KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP 256 (330)
T ss_dssp CCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCC-EEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC
T ss_pred CCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCC-EEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC
Confidence 45555555555544445555555555 5555555555444445555555555555555555333
Q ss_pred CCCCCccccCCcccCCCC
Q 007935 203 PQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 203 p~~~~~~~~~~~~~~~n~ 220 (584)
..+..+.++..+.+.+|.
T Consensus 257 ~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp TTTTTCSSCCEEECCSSC
T ss_pred hhhccCCCcCEEECCCCc
Confidence 333334444444444443
No 333
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=5.8e-16 Score=155.95 Aligned_cols=149 Identities=21% Similarity=0.250 Sum_probs=77.2
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCC--CCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSK--PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 67 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
++.|+|++|++++..+..|..+++|++|+|++|.++. ..|..+..+ +|++|++++|++++ +|..+. ++|+.|+|
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEEC
Confidence 4444444444443333344555555555555555531 333333333 33333333333321 222221 45666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|.+++..|..+..+++|+ .|+|++|++++..+..|..+++|+.|+|++|.++..++.+..+.++..+.+.+|.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLY-RLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCS-CCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSC
T ss_pred CCCcCCccCHHHhcCCCCCC-EEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCC
Confidence 66666655556666666666 6666666666665666666666666666666666433334444555555566554
No 334
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=4.7e-16 Score=160.32 Aligned_cols=84 Identities=26% Similarity=0.361 Sum_probs=37.4
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccc-ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPAN-LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
+++.|+|++|++++..|..|+.+++|++|+|++|.++. +|.. |..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 172 (390)
T 3o6n_A 94 TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 172 (390)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEEC
T ss_pred CcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEEC
Confidence 34444444444444444444444444444444444442 2222 344444444444444444444444444444444444
Q ss_pred ccCCCC
Q 007935 145 SSNLLN 150 (584)
Q Consensus 145 s~N~l~ 150 (584)
++|+++
T Consensus 173 ~~n~l~ 178 (390)
T 3o6n_A 173 SSNRLT 178 (390)
T ss_dssp CSSCCS
T ss_pred CCCcCC
Confidence 444443
No 335
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.66 E-value=2.7e-16 Score=145.76 Aligned_cols=130 Identities=25% Similarity=0.319 Sum_probs=114.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|.++ .++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999775 3458999999999999999999888899999999999999999999888999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCcc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
++|.+.+.+| .+..+++|+ .|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~-~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELK-SLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCC-EEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCC-EEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9998333777 699999999 99999999996 44 78899999999999999864
No 336
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.66 E-value=3.3e-16 Score=154.51 Aligned_cols=144 Identities=28% Similarity=0.340 Sum_probs=100.4
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 467777777777775443 7777777777777777765 33 477777777777777777753 45677777777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++. ..+..+++|+ .|+|++|++++..| +..+++|+.|+|++|.+++. |.+..+.++..+.+.+|+
T Consensus 142 ~~n~l~~~--~~l~~l~~L~-~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 211 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCS-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEE
T ss_pred cCCcCCcc--hhhccCCCCC-EEEccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCc
Confidence 77777743 4577777777 77777777775544 77777777777777777753 445555566666666664
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.65 E-value=1.5e-16 Score=158.69 Aligned_cols=155 Identities=21% Similarity=0.160 Sum_probs=128.5
Q ss_pred CCEEEEEcCCCCCcccCCccc--cCCCCCCEEEccCCCCCCCCc----ccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL--GLLNSLTRLSLASNNFSKPIP----ANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
.+++.|+|++|++++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 359999999999999999988 999999999999999998655 44567999999999999999888899999999
Q ss_pred CCeeecccCCCCCC--chH--HhhccccCccEEEeccccCccccCc----cccCCCCCcEEEeecCCCccCCC-CCCCc-
Q 007935 139 LTHLDLSSNLLNGS--LPE--FLLDLRALTGTLNLSFNQFSGQIPE----MYGHFPVMVSLDLRNNNLSGEIP-QVGSL- 208 (584)
Q Consensus 139 L~~L~ls~N~l~~~--~p~--~~~~l~~L~~~l~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p-~~~~~- 208 (584)
|++|||++|++++. ++. .+..+++|+ .|+|++|+++ .++. .++++++|++|+|++|.|++..| .+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQ-NLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCC-SCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCC-EEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 99999999998753 332 236889999 9999999997 3333 35788999999999999999855 34444
Q ss_pred --cccCCcccCCCCC
Q 007935 209 --LNQGPTAFSGNPG 221 (584)
Q Consensus 209 --~~~~~~~~~~n~~ 221 (584)
.++..+.+++|..
T Consensus 249 ~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 249 WSSALNSLNLSFAGL 263 (310)
T ss_dssp CCTTCCCEECCSSCC
T ss_pred CcCcCCEEECCCCCC
Confidence 4677778888863
No 338
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.6e-16 Score=141.87 Aligned_cols=131 Identities=23% Similarity=0.172 Sum_probs=115.6
Q ss_pred CCCCCCEEEccCCCCC-CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCcc
Q 007935 87 LLNSLTRLSLASNNFS-KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTG 165 (584)
Q Consensus 87 ~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 165 (584)
..++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT- 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC-
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC-
Confidence 3478999999999998 78998899999999999999999965 7899999999999999999988999999999999
Q ss_pred EEEeccccCcccc-CccccCCCCCcEEEeecCCCccCCC----CCCCccccCCcccCCCC
Q 007935 166 TLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSGEIP----QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 166 ~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~~~~~~~~~~~n~ 220 (584)
.|+|++|++++.. +..+..+++|+.|++++|.+++.++ .+..+.++..+.+.+|.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999999999643 3789999999999999999998776 45566667777776665
No 339
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.9e-16 Score=139.72 Aligned_cols=113 Identities=22% Similarity=0.217 Sum_probs=104.3
Q ss_pred CCCCCEEEccCCCCC-CCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccE
Q 007935 88 LNSLTRLSLASNNFS-KPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166 (584)
Q Consensus 88 l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~ 166 (584)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+ .
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~-~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT-H 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC-E
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC-E
Confidence 468999999999998 78999999999999999999999976 7799999999999999999988999999999999 9
Q ss_pred EEeccccCccc-cCccccCCCCCcEEEeecCCCccCCC
Q 007935 167 LNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (584)
Q Consensus 167 l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (584)
|++++|++++. .+..+..+++|+.|++++|.+++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999974 45889999999999999999998765
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.65 E-value=1.8e-16 Score=151.73 Aligned_cols=153 Identities=16% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCEEEEEcCCCC-CcccCCccccCCCCCCEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCC--
Q 007935 65 NRVTSLYLPNRN-LTGYMPSELGLLNSLTRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT-- 140 (584)
Q Consensus 65 ~~v~~l~l~~~~-l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-- 140 (584)
.+++.|+|++|+ +++..+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 468888888886 7766667788888888888887 88886556677788888888888888875 665 77777777
Q ss_pred -eeecccC-CCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCC-CccCCCC-CCCc-cccCCcc
Q 007935 141 -HLDLSSN-LLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNN-LSGEIPQ-VGSL-LNQGPTA 215 (584)
Q Consensus 141 -~L~ls~N-~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~-~~~~-~~~~~~~ 215 (584)
.|+|++| ++++..+..|.++++|+..|++++|+++ .+|......++|+.|+|++|. +++..+. +..+ .++..+.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 8888888 7775555567777777435778888887 444433333778888888884 7765553 3334 5566666
Q ss_pred cCCCC
Q 007935 216 FSGNP 220 (584)
Q Consensus 216 ~~~n~ 220 (584)
+++|.
T Consensus 212 l~~N~ 216 (239)
T 2xwt_C 212 VSQTS 216 (239)
T ss_dssp CTTCC
T ss_pred CCCCc
Confidence 66665
No 341
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.63 E-value=1e-15 Score=148.59 Aligned_cols=143 Identities=22% Similarity=0.298 Sum_probs=121.2
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|+++. ++ .+..+++|+.|+|++|+|++. |. +..+++|++|+|++|++++ +|.. .. ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEc
Confidence 578999999999984 45 789999999999999999974 44 8999999999999999985 4543 33 89999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ +| .+..+++|+ .|+|++|++++. + .+..+++|+.|+|++|.+++. +.+..+.++..+.+.+|+
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~-~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLE-ILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCC-EEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCccccc-EEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 9999985 45 588999999 999999999964 4 688999999999999999987 666777777778888886
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.63 E-value=1.4e-15 Score=151.32 Aligned_cols=144 Identities=25% Similarity=0.355 Sum_probs=107.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ ++. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 468888888888875444 8888888888888888875 34 67788888888888888875 343 788888888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..+ +..+++|+ .|+|++|++++..+ +..+++|+.|+|++|.+++..+ +..+.++..+.+++|.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~-~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQ-YLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCC-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred CCCccCcCcc--ccCCCCcc-EEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 8888874433 77888888 88888888875433 7788888888888888876544 5555666666777665
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=1.6e-15 Score=149.55 Aligned_cols=144 Identities=24% Similarity=0.346 Sum_probs=126.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++... + .+..+++|++|+|++|++++. +. +..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4689999999999855 3 489999999999999999974 43 9999999999999999985 44 4999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ + +.+..+++|+ .|++++|++++. ..+..+++|+.|+|++|.+++..| +..+.++..+.+++|.
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~-~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLE-SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCC-EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCcCCC-C-hhhcCCCCCC-EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 9999995 4 4689999999 999999999965 678999999999999999998776 6777778888888885
No 344
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.62 E-value=2.2e-16 Score=157.90 Aligned_cols=132 Identities=21% Similarity=0.175 Sum_probs=73.9
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC-CCCCCCeeecccCCCCCCchHHhhccccCccE
Q 007935 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK-TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~ 166 (584)
+++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+. .+++|++|+|++|.+++ +|. ...+++|+ .
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~-~ 195 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLK-T 195 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCC-E
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCC-E
Confidence 44556666666666554455555566666666666666554444442 45666666666666652 232 22355666 6
Q ss_pred EEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCCCCC
Q 007935 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLC 223 (584)
Q Consensus 167 l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l~ 223 (584)
|+|++|++++ +|..+..+++|+.|+|++|.|++.++.+..+.++..+.+.+|+..|
T Consensus 196 L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp EECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBH
T ss_pred EECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccC
Confidence 6666666663 3334666666666666666666544444444555555666665443
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.62 E-value=4e-16 Score=167.32 Aligned_cols=132 Identities=23% Similarity=0.234 Sum_probs=110.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57888999999988877788888999999999999998877888888999999999999888 56765 7888999999
Q ss_pred ccCCCCC-CchHHhhccccCccEEEeccccCccccCccccCCCCC--cEEEeecCCC--ccCCC
Q 007935 145 SSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM--VSLDLRNNNL--SGEIP 203 (584)
Q Consensus 145 s~N~l~~-~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L--~~L~l~~N~l--~~~~p 203 (584)
++|++++ .+|..+.++++|+ .|+|++|++++ ..+..+++| +.|+|++|.+ ++..|
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~-~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~ 157 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLK-FLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDP 157 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCC-EEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCT
T ss_pred cCCccccccchhhhccCCcce-EEEecCcccch---hhccccccceeeEEEeeccccccccccc
Confidence 9999886 4788888899998 89999998886 356677777 8999999988 66666
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.62 E-value=1.1e-15 Score=152.15 Aligned_cols=144 Identities=26% Similarity=0.370 Sum_probs=126.1
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|+|++|++++ +|. +..+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 5799999999999864 479999999999999999987 553 8999999999999999986543 899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ ++. +..+++|+ .|+|++|++++..+ +..+++|+.|+|++|.+++..| +..+.++..+.+.+|+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~-~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLT-TLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQT 228 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCC-EEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEE
T ss_pred cCCcCCC-Chh-hcCCCCCC-EEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCe
Confidence 9999995 554 99999999 99999999996544 8899999999999999998765 6667777778888886
No 347
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.62 E-value=6.4e-16 Score=167.28 Aligned_cols=132 Identities=24% Similarity=0.224 Sum_probs=66.5
Q ss_pred cCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccC--CCCcccCCCCCCCeeecccCCCCCCchH-Hhhcccc
Q 007935 86 GLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCG--PIPDRIKTLKNLTHLDLSSNLLNGSLPE-FLLDLRA 162 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~ 162 (584)
..+++|++|+|++|.+++.+|..+..+++|++|+|++|++++ .+|..|.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 344555555555555555555555555555555555555553 2233455555555555555555543443 2444555
Q ss_pred CccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
|+ .|+|++|++++.+|..+. ++|+.|+|++|+|+..++....+.++..+.+++|.
T Consensus 430 L~-~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 430 IL-VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp CC-EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSC
T ss_pred CC-EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCC
Confidence 55 555555555544444332 45555555555555333333344444444555543
No 348
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=4.9e-16 Score=141.16 Aligned_cols=129 Identities=22% Similarity=0.222 Sum_probs=110.9
Q ss_pred CCEEEEEcCCCCCcccCCccccCCC-CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLN-SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|+++. +|. +..+. +|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 468999999999995 454 55554 999999999999974 6889999999999999999965445568999999999
Q ss_pred cccCCCCCCchH--HhhccccCccEEEeccccCccccCcc----ccCCCCCcEEEeecCCCcc
Q 007935 144 LSSNLLNGSLPE--FLLDLRALTGTLNLSFNQFSGQIPEM----YGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 144 ls~N~l~~~~p~--~~~~l~~L~~~l~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~~ 200 (584)
|++|+|+ .+|. .+..+++|+ .|++++|+++ .+|.. +..+++|+.||+++|.+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~-~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLT-YLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCC-EEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCC-EEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999996 7787 889999999 9999999998 56664 8899999999999998764
No 349
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.62 E-value=1.4e-15 Score=164.12 Aligned_cols=155 Identities=23% Similarity=0.264 Sum_probs=134.6
Q ss_pred eEecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCC
Q 007935 60 IHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNL 139 (584)
Q Consensus 60 v~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 139 (584)
..|....+ .++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 35776555 789999998 6676654 799999999999998888999999999999999999998888999999999
Q ss_pred CeeecccCCCCCCchHHhhccccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCCccCCC--CCCCccccCCccc
Q 007935 140 THLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNLSGEIP--QVGSLLNQGPTAF 216 (584)
Q Consensus 140 ~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~~~~~~~~~ 216 (584)
++|||++|++++..|..|.++++|+ .|+|++|++++ .+|..|+++++|+.|++++|.+.+.+| .+..+.++..+.+
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLK-YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCC-EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCc-EEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 9999999999988888899999999 99999999987 467889999999999999999666555 3556666667777
Q ss_pred CCCC
Q 007935 217 SGNP 220 (584)
Q Consensus 217 ~~n~ 220 (584)
.+|.
T Consensus 156 ~~n~ 159 (549)
T 2z81_A 156 KALS 159 (549)
T ss_dssp EETT
T ss_pred cCCc
Confidence 7765
No 350
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.62 E-value=1.3e-15 Score=164.75 Aligned_cols=144 Identities=28% Similarity=0.353 Sum_probs=123.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|++..+ +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 579999999999997655 8999999999999999986 44 78899999999999999985 3 45889999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+|++. ..+..+++|+ .|+|++|+|++..| +..+++|+.|+|++|.|++. |.+..+.++..+.+.+|+
T Consensus 139 s~N~l~~l--~~l~~l~~L~-~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLD-TLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCS-EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEE
T ss_pred CCCccCCc--hhhcccCCCC-EEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCc
Confidence 99999854 6788999999 99999999997766 88999999999999999875 667777777777887775
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.61 E-value=8.9e-17 Score=178.21 Aligned_cols=135 Identities=25% Similarity=0.321 Sum_probs=124.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|++|++|++|+|
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 57999999999998 78888889999999999999999 79999999999999999999999 88999999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCC-CcEEEeecCCCccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~ 204 (584)
++|.|+ .+|..|.++++|+ .|+|++|+|++.+|..+..+.. +..|+|++|.++|.+|.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQ-FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCC-CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCCCC-ccChhhhcCCCcc-EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 999998 8899999999999 9999999999999998876543 23588999999999984
No 352
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.61 E-value=3.1e-16 Score=167.72 Aligned_cols=154 Identities=14% Similarity=0.030 Sum_probs=115.6
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------hhhHhHHHHHHHHHhcCCCceeeeeEEEEeCCc
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~~~~ 419 (584)
.++||+|+||.||+|.... ..+|+|+....... ...++|.+|++++++++|||||++..++...++
T Consensus 341 ~~~LG~G~fg~Vy~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 413 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYLD-------FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN 413 (540)
T ss_dssp -------CCEEEEEEECSS-------CEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT
T ss_pred CCEEeeCCCEEEEEEEECC-------CeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc
Confidence 5689999999999995543 67888886543211 113568999999999999999988888888889
Q ss_pred eeEeeecccCCcHHHHH-----------------hcc--cccccCCCCccccccCeEEecCCCcc---------------
Q 007935 420 KLLISDFIRNGSLYAAL-----------------HGF--GLNRLLPGTSKVTKNETIVTSGTGSR--------------- 465 (584)
Q Consensus 420 ~~lV~Ey~~~GsL~~~L-----------------~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~--------------- 465 (584)
.++||||+++|+|.+++ |+. -|+|++++|+.+.. .++..|||..
T Consensus 414 ~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~ 491 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIV 491 (540)
T ss_dssp TEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhh
Confidence 99999999999997654 443 46888999987766 7777787643
Q ss_pred ---cccCCCcccCccccccC-CCCCCccchhhHHHHHHHHHhCCCCCC
Q 007935 466 ---ISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDA 509 (584)
Q Consensus 466 ---~~~gt~~y~aPE~~~~~-~~~~~ksDV~SfGvvl~ElltG~~p~~ 509 (584)
...||+.|||||++... ..|+.++|+||..+-.+|.+.++.+|.
T Consensus 492 ~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 492 FKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred hhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 23689999999985431 357888999999999999999888774
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.60 E-value=1.7e-15 Score=151.47 Aligned_cols=134 Identities=23% Similarity=0.239 Sum_probs=118.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
..++.|+|++|++++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|+.|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEE
Confidence 4588999999999988888999999999999999999987777774 799999999999999855 33 44599999999
Q ss_pred cccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc-cCCC
Q 007935 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS-GEIP 203 (584)
Q Consensus 144 ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p 203 (584)
|++|+++ .+|..+..+++|+ .|+|++|+|+ .+|..+..+++|+.|+|++|.++ +.+|
T Consensus 198 Ls~N~l~-~l~~~~~~l~~L~-~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 198 LSSNKLA-FMGPEFQSAAGVT-WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCSSCCC-EECGGGGGGTTCS-EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred CCCCcCC-cchhhhcccCccc-EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 9999999 5666799999999 9999999999 57888999999999999999998 5444
No 354
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=2.8e-15 Score=135.21 Aligned_cols=104 Identities=25% Similarity=0.292 Sum_probs=61.3
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccC
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 147 (584)
+.|++++|+|+. +|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345666666663 454442 56666666666666655666666666666666666666554445566666666666666
Q ss_pred CCCCCchHHhhccccCccEEEeccccCc
Q 007935 148 LLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|++..|..|..+++|+ .|+|++|+++
T Consensus 89 ~l~~~~~~~~~~l~~L~-~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLT-HIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCC-EEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCC-EEEeCCCCCC
Confidence 66644444455555555 5555555554
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.60 E-value=1.9e-15 Score=162.42 Aligned_cols=109 Identities=26% Similarity=0.301 Sum_probs=73.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
.|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+.++++|+ .|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~-~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQ-ELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCC-EEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCc-EEEC
Confidence 36667777777665 554 666667777777777766 566666677777777777777764 55 666666776 6777
Q ss_pred ccccCcccc-CccccCCCCCcEEEeecCCCccCCCC
Q 007935 170 SFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 170 ~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
++|+|++.. |..|+.+++|+.|+|++|.|++.+|.
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 777776655 66666777777777777777666553
No 356
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=6.5e-15 Score=133.85 Aligned_cols=131 Identities=21% Similarity=0.242 Sum_probs=113.8
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 91 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
.+.+++++|+++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+ .|+|+
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT-ILYLH 84 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC-EEECC
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccC-EEECC
Confidence 4789999999984 776554 7899999999999977777789999999999999999977677789999999 99999
Q ss_pred cccCccccCccccCCCCCcEEEeecCCCccCCCCC-CCccccCCcccCCCCCCCCC
Q 007935 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV-GSLLNQGPTAFSGNPGLCGF 225 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~ 225 (584)
+|+|++..+..|..+++|+.|+|++|.|++.++.. ..+.++..+.+.+|+..|..
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999888888999999999999999999877753 45777888889999876654
No 357
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.59 E-value=3.6e-15 Score=151.10 Aligned_cols=128 Identities=23% Similarity=0.399 Sum_probs=79.2
Q ss_pred ccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCc
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALT 164 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 164 (584)
+..+++|++|+|++|.+++ +|. +..+++|++|+|++|++++. +.+..+++|+.|+|++|.+++ + +.+..+++|+
T Consensus 217 ~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~ 290 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLN 290 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCS
T ss_pred hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCC
Confidence 5555666666666666654 232 56666666666666666542 346666666666666666663 3 2466666666
Q ss_pred cEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 165 ~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
.|++++|++++..|..|..+++|+.|+|++|.+++.+| +..+.++..+.+.+|+
T Consensus 291 -~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 291 -SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp -EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred -EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 67777777766666666667777777777777766655 4455555555666554
No 358
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=4.1e-15 Score=134.15 Aligned_cols=110 Identities=23% Similarity=0.238 Sum_probs=99.3
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEec
Q 007935 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLS 170 (584)
Q Consensus 91 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~ 170 (584)
.+.|++++|.|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+ .|+|+
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~-~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT-QLSLN 86 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC-EEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCC-EEECC
Confidence 5789999999985 887764 8899999999999988899999999999999999999977777789999999 99999
Q ss_pred cccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 171 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
+|+|++..+..|.++++|+.|+|++|.++...+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9999987777899999999999999999977653
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.1e-17 Score=155.37 Aligned_cols=134 Identities=25% Similarity=0.267 Sum_probs=117.8
Q ss_pred CCEEEEEcCCCCCcccCCc------cccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPS------ELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 138 (584)
.+++.++++++.+.|..|. .+..+++|++|+|++|.|++ +| .+..+++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3566677777777777776 89999999999999999997 78 8999999999999999998 78888888899
Q ss_pred CCeeecccCCCCCCchHHhhccccCccEEEeccccCccccC-ccccCCCCCcEEEeecCCCccCCCC
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIP-EMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
|+.|+|++|++++ +| .+..+++|+ .|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~-~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLR-VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSS-EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCC-EEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999999999995 66 699999999 99999999995433 5789999999999999999988764
No 360
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.58 E-value=3.4e-15 Score=151.47 Aligned_cols=165 Identities=14% Similarity=0.054 Sum_probs=124.4
Q ss_pred CCCcceeeEecC-----------CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCE-Ee
Q 007935 53 TPCHWSGIHCIR-----------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVY-LD 119 (584)
Q Consensus 53 ~~c~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~-L~ 119 (584)
|-|.|..|.|.. .++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 568999999964 3689999999999976677899999999999999999877764 5778988775 67
Q ss_pred cCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEecc-ccCccccCccccCCC-CCcEEEeecCC
Q 007935 120 LAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF-NQFSGQIPEMYGHFP-VMVSLDLRNNN 197 (584)
Q Consensus 120 l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~-N~l~~~~p~~~~~l~-~L~~L~l~~N~ 197 (584)
+++|+++...|..|..+++|++|++++|++++..+..+....++. .|++++ |++....+..|..+. .++.|+|++|.
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~-~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKV-LLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCE-EEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhh-hhhhccccccccccccchhhcchhhhhhcccccc
Confidence 788999987788999999999999999999866665666666666 677654 456644555566654 46777777777
Q ss_pred CccCCCCCCCccccCCcccCC
Q 007935 198 LSGEIPQVGSLLNQGPTAFSG 218 (584)
Q Consensus 198 l~~~~p~~~~~~~~~~~~~~~ 218 (584)
|+...+......++..+.+.+
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~ 186 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSD 186 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTT
T ss_pred ccCCChhhccccchhHHhhcc
Confidence 776555444434444444443
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.57 E-value=9e-15 Score=141.86 Aligned_cols=126 Identities=23% Similarity=0.258 Sum_probs=111.7
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|+|++|++++ +|.. .. ++|++|+|++|++++ ++ .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 579999999999997654 9999999999999999997 5543 33 999999999999996 44 5999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
++|++++ +| .+..+++|+ .|+|++|++++. ..+..+++|+.|++++|.+++..
T Consensus 136 s~N~i~~-~~-~l~~l~~L~-~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLE-VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCC-EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCcCCC-Ch-HHccCCCCC-EEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 9999995 55 689999999 999999999976 67899999999999999998764
No 362
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=7.8e-15 Score=132.73 Aligned_cols=104 Identities=26% Similarity=0.282 Sum_probs=69.9
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccC
Q 007935 68 TSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSN 147 (584)
Q Consensus 68 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 147 (584)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777888775 5565553 67777777777777766667777777777777777777554445667777777777777
Q ss_pred CCCCCchHHhhccccCccEEEeccccCc
Q 007935 148 LLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
+|++..+..|..+++|+ .|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~-~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLT-HIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCS-EEECCSSCBC
T ss_pred ccceeCHHHhccccCCC-EEEeCCCCcc
Confidence 77644444466666666 6666666665
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.57 E-value=8.7e-15 Score=154.51 Aligned_cols=144 Identities=31% Similarity=0.379 Sum_probs=95.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. +.+..+++|++|++++|.+++..| +..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 4577777777777653 356677777777777777776433 6677777777777777765433 666777777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++..| +..+++|+ .|+|++|++++..| +..+++|+.|++++|.+++. +.+..+.++..+.+.+|.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLT-YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCS-EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred CCCcccCchh--hcCCCCCC-EEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCc
Confidence 7777765433 66677777 77777777776554 56667777777777776654 444555555555666554
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.56 E-value=8.1e-15 Score=158.56 Aligned_cols=144 Identities=25% Similarity=0.358 Sum_probs=127.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
..++.|+|++|++... + .|..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 5689999999999854 4 59999999999999999997544 8999999999999999985 44 7999999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+|++ +| .+..+++|+ .|+|++|+|++. ..+..+++|+.|+|++|.|++.+| +..+.++..+.+++|.
T Consensus 117 s~N~l~~-l~-~l~~l~~L~-~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 117 EHNGISD-IN-GLVHLPQLE-SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp TTSCCCC-CG-GGGGCTTCS-EEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred cCCCCCC-Cc-cccCCCccC-EEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 9999995 44 589999999 999999999965 679999999999999999999877 7778888888888885
No 365
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.56 E-value=7.8e-15 Score=156.99 Aligned_cols=114 Identities=29% Similarity=0.384 Sum_probs=81.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45788888888887 556 456788888888888876 666 554 77888888888775 555 5677777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|+|++ +|. .+++|+ .|+|++|+|++ +|. |. ++|+.|+|++|.|+
T Consensus 148 s~N~l~~-lp~---~l~~L~-~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLE-VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp CSSCCSC-CCC---CCTTCC-EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCCccCc-CCC---cCCCcC-EEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 7777774 555 456677 77777777775 555 54 67777777777777
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=1.2e-14 Score=156.30 Aligned_cols=135 Identities=25% Similarity=0.320 Sum_probs=83.4
Q ss_pred ccCCccccCCCCCCEEE-ccCCCCCCCCcc------cccC--CCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCC
Q 007935 79 GYMPSELGLLNSLTRLS-LASNNFSKPIPA------NLFN--ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLL 149 (584)
Q Consensus 79 ~~~~~~~~~l~~L~~L~-l~~n~l~~~~p~------~~~~--l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 149 (584)
+.+|..++.|++|+.|+ ++.|.+.. ++. .+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|
T Consensus 399 ~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 399 LYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp GGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred cCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 33445556666666666 44443321 111 0100 1246777777777764 555 77777777777777777
Q ss_pred CCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC-C-CCCCccccCCcccCCCC
Q 007935 150 NGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI-P-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 150 ~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p-~~~~~~~~~~~~~~~n~ 220 (584)
+ .+|..+.++++|+ .|+|++|+|++ +| .|+++++|+.|+|++|.|++.+ | .+..+.++..+.+++|+
T Consensus 476 ~-~lp~~~~~l~~L~-~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 476 R-ALPPALAALRCLE-VLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp C-CCCGGGGGCTTCC-EEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred c-ccchhhhcCCCCC-EEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 7 6677777777777 77777777775 55 6777777777777777777763 3 44555566666666665
No 367
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=2.2e-14 Score=129.75 Aligned_cols=109 Identities=23% Similarity=0.240 Sum_probs=98.0
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEecc
Q 007935 92 TRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF 171 (584)
Q Consensus 92 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~ 171 (584)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+ .|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~-~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLT-QLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-EEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhh-EEECCC
Confidence 68999999996 5888775 8999999999999988899999999999999999999976666678999999 999999
Q ss_pred ccCccccCccccCCCCCcEEEeecCCCccCCCC
Q 007935 172 NQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (584)
Q Consensus 172 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (584)
|+|++..+..|..+++|+.|+|++|.++...+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 999977777799999999999999999876543
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.53 E-value=3.9e-14 Score=149.52 Aligned_cols=144 Identities=35% Similarity=0.465 Sum_probs=123.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++++..| ++.+++|+.|++++|.+++ ++ .+..+++|++|+|++|++++..| +..+++|+.|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 579999999999987655 7889999999999999986 43 68889999999999999987654 889999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|.+++..| +..+++|+ .|+|++|++++..| +..+++|+.|+|++|++++..| +..+.++..+.+.+|.
T Consensus 273 ~~n~l~~~~~--~~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALT-NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCS-EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCccCcccc--ccCCCccC-eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCc
Confidence 9999996544 88899999 99999999997554 7889999999999999998776 5667777778888875
No 369
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=8.9e-15 Score=132.81 Aligned_cols=132 Identities=15% Similarity=0.101 Sum_probs=107.1
Q ss_pred ccccCCCCCCEEEccCCCCCCCCcccccCCC-CCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccc
Q 007935 83 SELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLR 161 (584)
Q Consensus 83 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 161 (584)
..+..+.+|+.|+|++|+++. +|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 456788999999999999995 564 55555 999999999999965 6799999999999999999955445669999
Q ss_pred cCccEEEeccccCccccCc--cccCCCCCcEEEeecCCCccCCCC----CCCccccCCcccCCCC
Q 007935 162 ALTGTLNLSFNQFSGQIPE--MYGHFPVMVSLDLRNNNLSGEIPQ----VGSLLNQGPTAFSGNP 220 (584)
Q Consensus 162 ~L~~~l~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~~~~~~~~~~~~~~n~ 220 (584)
+|+ .|+|++|+|+ .+|. .+..+++|+.|++++|.++...+. +..+.++..+.+.+|.
T Consensus 89 ~L~-~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 89 DLT-ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp TCC-EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CCC-EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 999 9999999997 5666 899999999999999999865432 3444555555555553
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.53 E-value=2.8e-14 Score=144.49 Aligned_cols=126 Identities=30% Similarity=0.371 Sum_probs=112.5
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++..+ +..+++|++|++++|.+++ + ..+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 579999999999986544 9999999999999999986 4 4789999999999999999864 46899999999999
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++|.+++..|..+..+++|+ .|++++|++++..| +..+++|+.|++++|.|+
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLT-TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCS-EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCcCCCcChhHhhccccCC-EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999999999 99999999997766 889999999999999986
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.52 E-value=6.1e-14 Score=147.22 Aligned_cols=122 Identities=29% Similarity=0.318 Sum_probs=68.2
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
+++.|+|++|++++. | .++.+++|++|+|++|+|++ +| +..+++|++|+|++|+|++. | ++.+++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 456666666666643 3 45666666666666666655 23 55566666666666666542 2 5556666666666
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
+|++++ +| +..+++|+ .|++++|++++. + ++++++|+.|++++|...+.+
T Consensus 115 ~N~l~~-l~--~~~l~~L~-~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLT-YLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp SSCCSC-CC--CTTCTTCC-EEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC
T ss_pred CCcCCe-ec--CCCCCcCC-EEECCCCcccee-c--cccCCcCCEEECCCCCccccc
Confidence 666653 33 55556665 666666666542 2 445555555555555443333
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.50 E-value=1.4e-13 Score=144.46 Aligned_cols=138 Identities=24% Similarity=0.258 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++. + ++.+++|++|+|++|++++ +| +..+++|++|+|++|++++. + ++.+++|+.|++
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l 155 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDC 155 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEEC
Confidence 5688889999988874 3 8888888888888888886 44 78888888888888888763 3 566666666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|...+.+ .+..+++|+ .|++++|++++ +| ++.+++|+.|++++|.+++. .+..+.++..+.+++|
T Consensus 156 ~~n~~~~~~--~~~~l~~L~-~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N 222 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLT-TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSN 222 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCC-EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSS
T ss_pred CCCCccccc--ccccCCcCC-EEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCC
Confidence 666544444 255555665 66666666654 33 45555555555555555543 1333444444444444
No 373
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.49 E-value=2e-15 Score=152.25 Aligned_cols=154 Identities=19% Similarity=0.242 Sum_probs=96.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCC-CcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeee
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKP-IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 143 (584)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777765544 44667777777777776654 566666777777777777777666666666777777777
Q ss_pred cccC-CCCC-CchHHhhccccCccEEEeccc-cCccc-cCccccCCC-CCcEEEeecC--CCc-cCCCC-CCCccccCCc
Q 007935 144 LSSN-LLNG-SLPEFLLDLRALTGTLNLSFN-QFSGQ-IPEMYGHFP-VMVSLDLRNN--NLS-GEIPQ-VGSLLNQGPT 214 (584)
Q Consensus 144 ls~N-~l~~-~~p~~~~~l~~L~~~l~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~-~~~~~~~~~~ 214 (584)
|++| .+++ .+|..+.++++|+ .|++++| .+++. ++..+..++ +|+.|+|++| .++ +.+|. +..+.++..+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~-~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLD-ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCC-EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCC-EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 7777 5654 2566666677776 7777777 66643 455566666 6777777766 343 22221 1223344445
Q ss_pred ccCCCC
Q 007935 215 AFSGNP 220 (584)
Q Consensus 215 ~~~~n~ 220 (584)
.+++|.
T Consensus 228 ~l~~~~ 233 (336)
T 2ast_B 228 DLSDSV 233 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 555554
No 374
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.48 E-value=2e-13 Score=143.09 Aligned_cols=136 Identities=24% Similarity=0.369 Sum_probs=91.6
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|+|++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 467888888888886 5543 3677777777777765 3321 1578888888888875 66 4777888888888
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|++++ +|..+ .+|+ .|++++|++++ +| .++++++|+.|++++|.+++ +|.. ..++..+.+.+|.
T Consensus 161 ~~N~l~~-lp~~~---~~L~-~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLE-FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNNI 226 (454)
T ss_dssp CSSCCSC-CCCCC---TTCC-EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSSC
T ss_pred CCCcCcc-cCCCc---cccc-EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCCc
Confidence 8888774 55433 3666 77788887775 55 47777778888888877776 3321 1244445555553
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.47 E-value=2.1e-13 Score=143.03 Aligned_cols=137 Identities=27% Similarity=0.355 Sum_probs=73.8
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.|++++|++++. |.. .++|++|+|++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|+|
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 3566666666666542 211 1456666666666664 55 46666666666666666653 44332 35666666
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCC
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGN 219 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n 219 (584)
++|++++ +| .+.++++|+ .|++++|++++ +|... ++|+.|++++|.++ .+|.+..+.++..+.+++|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~-~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLT-AIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCC-EEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred cCCcCCc-Cc-cccCCCCCC-EEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 6666653 44 355566665 66666666553 33221 35555555555555 3444444444444555444
No 376
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.46 E-value=9.6e-15 Score=147.18 Aligned_cols=155 Identities=23% Similarity=0.266 Sum_probs=130.7
Q ss_pred CCEEEEEcCCCCCccc-CCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCC-cccC-CCCcccCCCCCCCe
Q 007935 65 NRVTSLYLPNRNLTGY-MPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN-SFCG-PIPDRIKTLKNLTH 141 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~-~~p~~~~~l~~L~~ 141 (584)
.+++.|+|++|++++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++ .++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5799999999999876 7888999999999999999999888888999999999999999 6775 36777888999999
Q ss_pred eecccC-CCCCC-chHHhhccc-cCccEEEeccc--cCc-cccCccccCCCCCcEEEeecCC-CccC-CCCCCCccccCC
Q 007935 142 LDLSSN-LLNGS-LPEFLLDLR-ALTGTLNLSFN--QFS-GQIPEMYGHFPVMVSLDLRNNN-LSGE-IPQVGSLLNQGP 213 (584)
Q Consensus 142 L~ls~N-~l~~~-~p~~~~~l~-~L~~~l~l~~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~-~p~~~~~~~~~~ 213 (584)
|+|++| .+++. ++..+..++ +|+ .|+|++| .++ +.+|..+.++++|+.|+|++|. +++. ++.+..+.++..
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~-~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETIT-QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCC-EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCC-EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 999999 89864 788889999 999 9999999 565 5678888889999999999998 6643 444555666777
Q ss_pred cccCCCC
Q 007935 214 TAFSGNP 220 (584)
Q Consensus 214 ~~~~~n~ 220 (584)
+.+.+|.
T Consensus 252 L~l~~~~ 258 (336)
T 2ast_B 252 LSLSRCY 258 (336)
T ss_dssp EECTTCT
T ss_pred eeCCCCC
Confidence 7777775
No 377
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.45 E-value=9.5e-15 Score=150.30 Aligned_cols=156 Identities=18% Similarity=0.207 Sum_probs=128.0
Q ss_pred CCEEEEEcCCCCCcc----cCCccccCC---------CCCCEEEccCCCCC-CCCc---ccccCCCCCCEEecCCCccc-
Q 007935 65 NRVTSLYLPNRNLTG----YMPSELGLL---------NSLTRLSLASNNFS-KPIP---ANLFNATNLVYLDLAHNSFC- 126 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~----~~~~~~~~l---------~~L~~L~l~~n~l~-~~~p---~~~~~l~~L~~L~l~~N~l~- 126 (584)
.+++.|+|++|++++ .++..+..+ ++|++|+|++|+|+ +.+| ..+..+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 679999999999963 356667777 89999999999998 4455 46778999999999999997
Q ss_pred -C---CCCcccCCCCCCCeeecccCCCC----CCchHHhhccccCccEEEeccccCccc----cCccc--cCCCCCcEEE
Q 007935 127 -G---PIPDRIKTLKNLTHLDLSSNLLN----GSLPEFLLDLRALTGTLNLSFNQFSGQ----IPEMY--GHFPVMVSLD 192 (584)
Q Consensus 127 -~---~~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~--~~l~~L~~L~ 192 (584)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+ .|+|++|++++. +|..+ +.+++|+.|+
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~-~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR-ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC-EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC-EEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 3 34557889999999999999996 67899999999999 999999999876 56777 4489999999
Q ss_pred eecCCCcc----CCCC-C-CCccccCCcccCCCCC
Q 007935 193 LRNNNLSG----EIPQ-V-GSLLNQGPTAFSGNPG 221 (584)
Q Consensus 193 l~~N~l~~----~~p~-~-~~~~~~~~~~~~~n~~ 221 (584)
|++|.+++ .+|. + ..+.++..+.+.+|+.
T Consensus 281 L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 281 LQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred CcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 99999998 3553 2 2246677778888863
No 378
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=8.6e-14 Score=140.91 Aligned_cols=108 Identities=24% Similarity=0.251 Sum_probs=83.6
Q ss_pred CCcceeeEecCCCEEEEEcCCC-CCcccCCccccCCCCCCEEEccC-CCCCCCCcccccCCCCCCEEecCCCcccCCCCc
Q 007935 54 PCHWSGIHCIRNRVTSLYLPNR-NLTGYMPSELGLLNSLTRLSLAS-NNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD 131 (584)
Q Consensus 54 ~c~w~gv~c~~~~v~~l~l~~~-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 131 (584)
.|.|..|.|. ++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.++++|++|+|++|+|++..|.
T Consensus 7 ~C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 5888776664 34 6763 677 88888999999986 888877777888888888898888888888888
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
.|.+|++|+.|||++|+|++..|..+..++ |+ .|+|++|+|.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~-~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQ-ELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CC-EEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ce-EEEeeCCCcc
Confidence 888888888888888888854444444444 77 7777777776
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.43 E-value=1.2e-14 Score=149.54 Aligned_cols=113 Identities=24% Similarity=0.271 Sum_probs=54.3
Q ss_pred cCCCCCCEEEccCCCCCC----CCcccccCCCCCCEEecCCCcccCCCCcc----cCCC---------CCCCeeecccCC
Q 007935 86 GLLNSLTRLSLASNNFSK----PIPANLFNATNLVYLDLAHNSFCGPIPDR----IKTL---------KNLTHLDLSSNL 148 (584)
Q Consensus 86 ~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l---------~~L~~L~ls~N~ 148 (584)
..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 445555555555555554 24444455555555555555554222222 2222 455555555555
Q ss_pred CC-CCch---HHhhccccCccEEEeccccCc--c---ccCccccCCCCCcEEEeecCCCc
Q 007935 149 LN-GSLP---EFLLDLRALTGTLNLSFNQFS--G---QIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 149 l~-~~~p---~~~~~l~~L~~~l~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
++ +.+| ..+..+++|+ .|+|++|+++ | ..|..+..+++|+.|+|++|.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~-~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLH-TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCC-EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred CCcHHHHHHHHHHHhCCCcC-EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 54 3333 2444455555 5555555554 2 23334455555555555555553
No 380
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.43 E-value=1.3e-13 Score=149.33 Aligned_cols=136 Identities=26% Similarity=0.394 Sum_probs=100.6
Q ss_pred CCCCCCCCCCCcceee--------EecCCCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCC
Q 007935 45 DSWSESDSTPCHWSGI--------HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLV 116 (584)
Q Consensus 45 ~~w~~~~~~~c~w~gv--------~c~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 116 (584)
..|... ..||.|.|. .|....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+. +|. .+++|+
T Consensus 13 ~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~ 84 (622)
T 3g06_A 13 SAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELR 84 (622)
T ss_dssp HHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCC
T ss_pred HHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCC
Confidence 356433 456888664 333456889999999998 6777665 789999999999984 675 578899
Q ss_pred EEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 117 YLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 117 ~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|+|++|+|+ .+|. .+++|++|+|++|.|+ .+|. .+++|+ .|++++|+|++ +|.. +++|+.|+|++|
T Consensus 85 ~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~-~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLC-KLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCC-EEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred EEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcC-EEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 9999999988 4665 6788888888888888 4555 556777 78888888774 5543 367777788777
Q ss_pred CCccC
Q 007935 197 NLSGE 201 (584)
Q Consensus 197 ~l~~~ 201 (584)
.+++.
T Consensus 152 ~l~~l 156 (622)
T 3g06_A 152 QLASL 156 (622)
T ss_dssp CCSCC
T ss_pred cCCCc
Confidence 77764
No 381
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.43 E-value=1.8e-14 Score=146.74 Aligned_cols=137 Identities=26% Similarity=0.284 Sum_probs=84.7
Q ss_pred CEEEEEcCCCCCcccCC----ccccCCC-CCCEEEccCCCCCCCCcccccCC-----CCCCEEecCCCcccCCCCccc--
Q 007935 66 RVTSLYLPNRNLTGYMP----SELGLLN-SLTRLSLASNNFSKPIPANLFNA-----TNLVYLDLAHNSFCGPIPDRI-- 133 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~-- 133 (584)
.++.|+|++|++++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46777777777766555 5566666 67777777777766555555554 677777777777765555433
Q ss_pred --CCC-CCCCeeecccCCCCCCchHHhhc-----cccCccEEEeccccCccc----cCccccCCC-CCcEEEeecCCCcc
Q 007935 134 --KTL-KNLTHLDLSSNLLNGSLPEFLLD-----LRALTGTLNLSFNQFSGQ----IPEMYGHFP-VMVSLDLRNNNLSG 200 (584)
Q Consensus 134 --~~l-~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~~l~l~~N~l~~~----~p~~~~~l~-~L~~L~l~~N~l~~ 200 (584)
..+ ++|+.|+|++|++++..+..+.. .++|+ .|+|++|++++. ++..+..++ +|+.|+|++|.+++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~-~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT-SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC-EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee-EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 333 66777777777776555544433 24666 777777777642 333334444 67777777777765
Q ss_pred CCC
Q 007935 201 EIP 203 (584)
Q Consensus 201 ~~p 203 (584)
..+
T Consensus 182 ~~~ 184 (362)
T 3goz_A 182 KNC 184 (362)
T ss_dssp SCH
T ss_pred hhH
Confidence 443
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=2.7e-13 Score=137.24 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=96.4
Q ss_pred CEEEccCC-CCCCCCcccccCCCCCCEEecCC-CcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEe
Q 007935 92 TRLSLASN-NFSKPIPANLFNATNLVYLDLAH-NSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (584)
Q Consensus 92 ~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l 169 (584)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+ .|+|
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS-RLNL 87 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC-EEEC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC-EEeC
Confidence 35799998 8985 898 99999999999996 999988888999999999999999999998889999999999 9999
Q ss_pred ccccCccccCccccCCCCCcEEEeecCCCccC
Q 007935 170 SFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 170 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
++|+|++..+..|..++ |+.|+|++|.|...
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 99999977777777776 99999999999864
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.38 E-value=1.5e-12 Score=140.96 Aligned_cols=55 Identities=24% Similarity=0.296 Sum_probs=23.2
Q ss_pred ccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCCCCCCCccccCCcccCCCC
Q 007935 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 161 ~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (584)
++|+ .|+|++|+|+ .+|. .+++|+.|+|++|+|+..++.+..+.++..+.+++|+
T Consensus 241 ~~L~-~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 241 SELK-ELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp TTCC-EEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCC
T ss_pred CcCc-EEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCC
Confidence 3444 4444444444 2332 3344455555555555222223333334444444444
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.38 E-value=8.5e-14 Score=141.79 Aligned_cols=151 Identities=23% Similarity=0.294 Sum_probs=121.7
Q ss_pred EEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCc----ccccCCC-CCCEEecCCCcccCCCCcccCCC-----CC
Q 007935 69 SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIP----ANLFNAT-NLVYLDLAHNSFCGPIPDRIKTL-----KN 138 (584)
Q Consensus 69 ~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~ 138 (584)
.+.|++|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36789999999999988888889999999999998666 6778898 99999999999998877777765 99
Q ss_pred CCeeecccCCCCCCchHHhhcc-----ccCccEEEeccccCccccCcccc----C-CCCCcEEEeecCCCccCCCC----
Q 007935 139 LTHLDLSSNLLNGSLPEFLLDL-----RALTGTLNLSFNQFSGQIPEMYG----H-FPVMVSLDLRNNNLSGEIPQ---- 204 (584)
Q Consensus 139 L~~L~ls~N~l~~~~p~~~~~l-----~~L~~~l~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~p~---- 204 (584)
|++|+|++|.+++..+..+... ++|+ .|+|++|++++..+..+. . .++|++|+|++|.++...+.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~-~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTIT-VLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCC-EEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCcc-EEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999998888766654 8999 999999999977665544 3 36999999999999853321
Q ss_pred -CCCc-cccCCcccCCCC
Q 007935 205 -VGSL-LNQGPTAFSGNP 220 (584)
Q Consensus 205 -~~~~-~~~~~~~~~~n~ 220 (584)
+... .++..+.+++|.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHTSCTTCCEEECTTSC
T ss_pred HHhcCCccccEeeecCCC
Confidence 0111 245556666664
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.38 E-value=4.7e-15 Score=137.42 Aligned_cols=130 Identities=20% Similarity=0.240 Sum_probs=113.0
Q ss_pred ccCCCCCCEEEccCCCCCCCCcc------cccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhh
Q 007935 85 LGLLNSLTRLSLASNNFSKPIPA------NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLL 158 (584)
Q Consensus 85 ~~~l~~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 158 (584)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45667888889999999988887 89999999999999999996 77 8999999999999999999 8899899
Q ss_pred ccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCccCC--CCCCCccccCCcccCCCC
Q 007935 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI--PQVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 159 ~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--p~~~~~~~~~~~~~~~n~ 220 (584)
.+++|+ .|+|++|++++ +| .+..+++|+.|+|++|.+++.. +.+..+.++..+.+.+|+
T Consensus 91 ~~~~L~-~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 91 VADTLE-ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHCS-EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred cCCcCC-EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 999999 99999999996 55 6889999999999999999643 245566677777888886
No 386
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.35 E-value=1.2e-12 Score=128.16 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=100.0
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-----------------hhhHhHHHHHHHHHhcCCCceee
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-----------------WRFKDFESEVEAIARVQHPNIVR 409 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-----------------~~~~~f~~Ei~~l~~l~HpnIV~ 409 (584)
.+.||+|+||.||+|....+ +.||||.++..... .....|.+|++++++++ | ++
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g------~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKF------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp EEEEEECSSEEEEEEEETTT------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred cCEeccCCCceEEEEEeCCC------CEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 47899999999999999434 89999999753211 12467999999999999 5 77
Q ss_pred eeEEEEeCCceeEeeecccCCcHH------------------HHHhccc--ccccCCCCccccccCeEEecCCCcccccC
Q 007935 410 LKAFYYANDEKLLISDFIRNGSLY------------------AALHGFG--LNRLLPGTSKVTKNETIVTSGTGSRISAI 469 (584)
Q Consensus 410 l~g~~~~~~~~~lV~Ey~~~GsL~------------------~~L~~~g--~~~~~~~~~~i~~~~~~~~~~~~~~~~~g 469 (584)
+.+++. .+..++||||+++|+|. .+||+.| |+|+++.|+.+. ++.++..|||... .
T Consensus 166 v~~~~~-~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~--~ 241 (282)
T 1zar_A 166 VPKVYA-WEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV--E 241 (282)
T ss_dssp SCCEEE-EETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE--E
T ss_pred cCeEEe-ccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe--E
Confidence 777554 46679999999999984 3456554 788999999988 8888999998764 4
Q ss_pred CCcccCccccccC---------CCCCCccchhh
Q 007935 470 SNVYLAPEARIYG---------SKFTQKCDVYS 493 (584)
Q Consensus 470 t~~y~aPE~~~~~---------~~~~~ksDV~S 493 (584)
+..|+|||++... ..|..++|+|.
T Consensus 242 ~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 242 VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 4568999985321 23555666654
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.31 E-value=3.1e-12 Score=129.55 Aligned_cols=136 Identities=16% Similarity=0.110 Sum_probs=88.1
Q ss_pred CCEEEEEcCCCCCcccCC-ccccCCCCCCE-EEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCC----
Q 007935 65 NRVTSLYLPNRNLTGYMP-SELGLLNSLTR-LSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKN---- 138 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~---- 138 (584)
.+++.|+|++|++.+.+| ..|.++++|+. +.+++|+|+...|..|..+++|++|++++|++++..+..+....+
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 579999999999877665 46788888775 667779998877888899999999999999988655444433333
Q ss_pred ----------------------CCeeecccCCCCCCchHHhhccccCccEEEecc-ccCccccCccccCCCCCcEEEeec
Q 007935 139 ----------------------LTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSF-NQFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 139 ----------------------L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~-N~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
|+.|+|++|+|+ .+|.......+|+ .+++++ |+++...++.|.++++|+.|+|++
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~-~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLD-ELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEE-EEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchh-HHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 444555555555 4444444444555 555543 344433333455555555555555
Q ss_pred CCCccCC
Q 007935 196 NNLSGEI 202 (584)
Q Consensus 196 N~l~~~~ 202 (584)
|+|+..+
T Consensus 212 N~l~~lp 218 (350)
T 4ay9_X 212 TRIHSLP 218 (350)
T ss_dssp SCCCCCC
T ss_pred CCcCccC
Confidence 5555443
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.26 E-value=2.3e-13 Score=143.28 Aligned_cols=155 Identities=18% Similarity=0.083 Sum_probs=114.1
Q ss_pred CCEEEEEcCCCCCcccC-----CccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCCCCcccC-
Q 007935 65 NRVTSLYLPNRNLTGYM-----PSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGPIPDRIK- 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 134 (584)
.+++.|+|++|++++.. +..+..+++|++|+|++|.++.. ++..+..+++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 57899999999887542 22334688999999999998864 567777889999999999988754333332
Q ss_pred ----CCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccccCccccC-----CCCCcEEEeecCCCcc-
Q 007935 135 ----TLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQIPEMYGH-----FPVMVSLDLRNNNLSG- 200 (584)
Q Consensus 135 ----~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~- 200 (584)
..++|+.|+|++|.+++. +|..+..+++|+ .|+|++|++++..+..+.. .++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~-~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~ 385 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLL-ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 385 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCC-EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCcc-EEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChh
Confidence 236899999999998865 577778888998 9999999888665554443 6789999999998885
Q ss_pred ---CCC-CCCCccccCCcccCCCC
Q 007935 201 ---EIP-QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 201 ---~~p-~~~~~~~~~~~~~~~n~ 220 (584)
.+| .+....++..+.+++|+
T Consensus 386 ~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 386 SCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSS
T ss_pred hHHHHHHHHHhCCCccEEECCCCC
Confidence 444 22234556667777775
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.20 E-value=4.3e-13 Score=141.27 Aligned_cols=155 Identities=17% Similarity=0.155 Sum_probs=122.5
Q ss_pred CCEEEEEcCCCCCccc----CCccccCCCCCCEEEccCCCCCCCC-----cccccCCCCCCEEecCCCcccCC----CCc
Q 007935 65 NRVTSLYLPNRNLTGY----MPSELGLLNSLTRLSLASNNFSKPI-----PANLFNATNLVYLDLAHNSFCGP----IPD 131 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (584)
.+++.|+|++|++++. ++..+..+++|++|+|++|.++... +..+..+++|++|+|++|++++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 3799999999999874 5778889999999999999987532 22234689999999999999864 677
Q ss_pred ccCCCCCCCeeecccCCCCCCchHHhhcc-----ccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCccCC
Q 007935 132 RIKTLKNLTHLDLSSNLLNGSLPEFLLDL-----RALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGEI 202 (584)
Q Consensus 132 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~ 202 (584)
.+..+++|+.|+|++|.+++..+..+... ++|+ .|+|++|.+++. ++..+..+++|+.|+|++|.+++..
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~-~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE-SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCC-EEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccce-eeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 78889999999999999986655555544 6899 999999999865 5777788899999999999998653
Q ss_pred CC-CC-----CccccCCcccCCCC
Q 007935 203 PQ-VG-----SLLNQGPTAFSGNP 220 (584)
Q Consensus 203 p~-~~-----~~~~~~~~~~~~n~ 220 (584)
+. +. ...++..+.+++|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHHcCCCCceEEEECCCCC
Confidence 21 11 12355666777774
No 390
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=5.1e-12 Score=128.54 Aligned_cols=135 Identities=19% Similarity=0.143 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCCCcccCCccccC-----CCCCCEEEccCCCCCCCCcccc-cCCCCCCEEecCCCcccCCCCccc-----
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGL-----LNSLTRLSLASNNFSKPIPANL-FNATNLVYLDLAHNSFCGPIPDRI----- 133 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~----- 133 (584)
..++.|+|++|+++......|.. .++|++|+|++|.|+......+ ..+++|+.|+|++|+|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 35667777777766433322222 2567777777776653222222 234566677777776653322222
Q ss_pred CCCCCCCeeecccCCCCC----CchHHhhccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCcc
Q 007935 134 KTLKNLTHLDLSSNLLNG----SLPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 134 ~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 200 (584)
....+|+.|+|++|.|+. .++..+..+++|+ .|+|++|+|+.. ++..+...++|+.|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~-~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVT-HLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCC-EEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcC-EEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 234567777777776653 2344445566666 677777766532 24455556667777777776654
No 391
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.01 E-value=1.2e-11 Score=125.72 Aligned_cols=136 Identities=21% Similarity=0.253 Sum_probs=106.9
Q ss_pred CCEEEEEcCCCCCcccCCccc-cCCCCCCEEEccCCCCCCCCcccc-----cCCCCCCEEecCCCcccC----CCCcccC
Q 007935 65 NRVTSLYLPNRNLTGYMPSEL-GLLNSLTRLSLASNNFSKPIPANL-----FNATNLVYLDLAHNSFCG----PIPDRIK 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~----~~p~~~~ 134 (584)
..++.|+|++|+++..-...+ ..+++|+.|+|++|+|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999975433222 346789999999999975433333 356889999999999974 3455567
Q ss_pred CCCCCCeeecccCCCCCC----chHHhhccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCccC
Q 007935 135 TLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSGE 201 (584)
Q Consensus 135 ~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 201 (584)
.+++|++|||++|.|+.. ++..+...++|+ .|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~-~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQ-ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCC-EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcC-eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 889999999999999742 356677888999 999999999853 445566678999999999998753
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.94 E-value=4.8e-12 Score=121.22 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCcceeeEecCC--CEEEEEcCC---CCCcccCC-ccccCCCCCCEEEccCCCCCCCCcc-cccCCCCCCE--EecCCCc
Q 007935 54 PCHWSGIHCIRN--RVTSLYLPN---RNLTGYMP-SELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVY--LDLAHNS 124 (584)
Q Consensus 54 ~c~w~gv~c~~~--~v~~l~l~~---~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~--L~l~~N~ 124 (584)
.|.|.|+.|... +|..+...+ ..+.+.++ ..+..++. .|...+|..++.++- .+...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 489999999864 565555443 22333332 22222221 222233333332221 1333444444 5666664
Q ss_pred cc---CCCCcccCCCCCCCeeecccCCCCC--CchHHhhccccCccEEEeccccCccccCccccCCC--CCcEEEeecCC
Q 007935 125 FC---GPIPDRIKTLKNLTHLDLSSNLLNG--SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFP--VMVSLDLRNNN 197 (584)
Q Consensus 125 l~---~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~ 197 (584)
.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+ .|+|++|+|++. +.+..+. +|++|+|++|.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~-~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK-ILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCC-EEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCC-EEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 32 2222222456777777777777776 4556667777777 777777777754 2334444 77777777777
Q ss_pred CccCCC
Q 007935 198 LSGEIP 203 (584)
Q Consensus 198 l~~~~p 203 (584)
+++.+|
T Consensus 232 l~~~~~ 237 (267)
T 3rw6_A 232 LCDTFR 237 (267)
T ss_dssp TGGGCS
T ss_pred CccccC
Confidence 777655
No 393
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.87 E-value=1.5e-10 Score=125.90 Aligned_cols=155 Identities=12% Similarity=0.076 Sum_probs=86.8
Q ss_pred CCEEEEEcCC-----------CCCccc-CCccccCCCCCCEEEccCCCCCCCCcccccC-CCCCCEEecC----CCcccC
Q 007935 65 NRVTSLYLPN-----------RNLTGY-MPSELGLLNSLTRLSLASNNFSKPIPANLFN-ATNLVYLDLA----HNSFCG 127 (584)
Q Consensus 65 ~~v~~l~l~~-----------~~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~ 127 (584)
.+++.|+|++ |.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|++++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 4577777772 455533 2222345677777777777776655555554 6677777774 566664
Q ss_pred C-----CCcccCCCCCCCeeecccC--CCCCCchHHhhc-cccCccEEEeccccCcc-ccCccccCCCCCcEEEeecCCC
Q 007935 128 P-----IPDRIKTLKNLTHLDLSSN--LLNGSLPEFLLD-LRALTGTLNLSFNQFSG-QIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 128 ~-----~p~~~~~l~~L~~L~ls~N--~l~~~~p~~~~~-l~~L~~~l~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l 198 (584)
. ++..+.++++|+.|+|+++ .+++..+..+.. +++|+ .|+|++|++++ .++..+..+++|+.|+|++|.|
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~-~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVR-WMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCC-EEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccce-EeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 3 2233455666777776532 355444444443 56666 66677666664 3344455666667777776666
Q ss_pred ccC-CCCC-CCccccCCcccCCCC
Q 007935 199 SGE-IPQV-GSLLNQGPTAFSGNP 220 (584)
Q Consensus 199 ~~~-~p~~-~~~~~~~~~~~~~n~ 220 (584)
++. ++.. ..+.++..+.+++|.
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cHHHHHHHHHhcCccCeeECcCCc
Confidence 542 1111 123344455555554
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=2.6e-09 Score=106.88 Aligned_cols=54 Identities=11% Similarity=0.159 Sum_probs=29.5
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCee
Q 007935 88 LNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 142 (584)
+++|+.|+|.+ +++..-+..|.++++|+.|+|++|.+....+..|..+.++..+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l 153 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFI 153 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEE
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEe
Confidence 66666666666 5654444556666666666666666543333344443333333
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=6.7e-09 Score=103.94 Aligned_cols=56 Identities=9% Similarity=0.230 Sum_probs=40.3
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLA 121 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 121 (584)
.+++.|+|++ +++..-+..|.++++|+.|+|++|.+...-+..|.++.++..+.++
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTT
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCc
Confidence 4689999999 8887777889999999999999998764444444444444444433
No 396
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.70 E-value=2.9e-09 Score=115.58 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred EEEEEcCCCC-Ccc-cCCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccC----CCCcccCCC
Q 007935 67 VTSLYLPNRN-LTG-YMPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCG----PIPDRIKTL 136 (584)
Q Consensus 67 v~~l~l~~~~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l 136 (584)
++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7778877765 211 1223334677788888888877654 33344567778888888887762 334445567
Q ss_pred CCCCeeecccCCCCCCchHHhhccccCccEEEeccccCc---cccCccccCCCCCcEEEeecC
Q 007935 137 KNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS---GQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 137 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N 196 (584)
++|+.|+|++|.+. .+|..+.++++|+ .|+++.+... +..+..+..+++|+.|+++++
T Consensus 220 ~~L~~L~L~~~~~~-~l~~~~~~~~~L~-~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 220 RSLVSVKVGDFEIL-ELVGFFKAAANLE-EFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp TTCCEEECSSCBGG-GGHHHHHHCTTCC-EEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred CCCcEEeccCccHH-HHHHHHhhhhHHH-hhcccccccccchHHHHHHhhccccccccCcccc
Confidence 77888888887777 4677777777777 7777643221 222334444455555555543
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=1e-09 Score=105.04 Aligned_cols=104 Identities=25% Similarity=0.308 Sum_probs=73.1
Q ss_pred ccCCCCCCE--EEccCCCCCCCCccc----ccCCCCCCEEecCCCcccC--CCCcccCCCCCCCeeecccCCCCCCchHH
Q 007935 85 LGLLNSLTR--LSLASNNFSKPIPAN----LFNATNLVYLDLAHNSFCG--PIPDRIKTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 85 ~~~l~~L~~--L~l~~n~l~~~~p~~----~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
|...+.|.. ++++.|... .++.. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444444544 667777433 23322 2467889999999999987 4566777889999999999999854 33
Q ss_pred hhccc--cCccEEEeccccCccccCc-------cccCCCCCcEEE
Q 007935 157 LLDLR--ALTGTLNLSFNQFSGQIPE-------MYGHFPVMVSLD 192 (584)
Q Consensus 157 ~~~l~--~L~~~l~l~~N~l~~~~p~-------~~~~l~~L~~L~ 192 (584)
+..+. .|+ .|+|++|.+++.+|+ .+..+++|+.||
T Consensus 214 l~~l~~l~L~-~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLE-ELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCS-EEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcc-eEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 45555 888 899999999877663 366788888776
No 398
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.63 E-value=8.6e-08 Score=92.18 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=76.8
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceE--EEEEEecCCCcc-----------------------hhhHhHHHHHHHHHh
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTV--VAVRRLTEGDAT-----------------------WRFKDFESEVEAIAR 401 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~--vAvK~l~~~~~~-----------------------~~~~~f~~Ei~~l~~ 401 (584)
...||+|+||.||+|.....+ +. ||||.++..... .....+.+|+.+|.+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDG-----KPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETT-----EEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CCEEeecceEEEEEEEEcCCC-----cEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 478999999999999983333 78 999987643111 011368899999999
Q ss_pred cCCCce--eeeeEEEEeCCceeEeeecccC-C----cHH----------------------HHHh-ccc--ccccCCCCc
Q 007935 402 VQHPNI--VRLKAFYYANDEKLLISDFIRN-G----SLY----------------------AALH-GFG--LNRLLPGTS 449 (584)
Q Consensus 402 l~HpnI--V~l~g~~~~~~~~~lV~Ey~~~-G----sL~----------------------~~L~-~~g--~~~~~~~~~ 449 (584)
++|+++ ...+++ +..+|||||+.+ | +|. .+|| ..| |+|+++.|+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NI 202 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI 202 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHE
Confidence 988864 344432 467999999942 4 553 3456 544 688888888
Q ss_pred cccccCeEEecCCCcccc
Q 007935 450 KVTKNETIVTSGTGSRIS 467 (584)
Q Consensus 450 ~i~~~~~~~~~~~~~~~~ 467 (584)
.+.. .++..|||....
T Consensus 203 Ll~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 203 MYID--KVYFIDMGQAVT 218 (258)
T ss_dssp EESS--SEEECCCTTCEE
T ss_pred EEcC--cEEEEECccccc
Confidence 7766 667788876543
No 399
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.61 E-value=5.6e-09 Score=95.02 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=61.0
Q ss_pred cccCCCCCCEEEccCC-CCCCC----CcccccCCCCCCEEecCCCcccCC----CCcccCCCCCCCeeecccCCCCCC--
Q 007935 84 ELGLLNSLTRLSLASN-NFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPDRIKTLKNLTHLDLSSNLLNGS-- 152 (584)
Q Consensus 84 ~~~~l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~-- 152 (584)
.+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555666666665 55421 223344455666666666665421 223334445666666666666532
Q ss_pred --chHHhhccccCccEEEe--ccccCccc----cCccccCCCCCcEEEeecCCCc
Q 007935 153 --LPEFLLDLRALTGTLNL--SFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 153 --~p~~~~~l~~L~~~l~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+...+...+.|+ .|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~-~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLI-ELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCC-EEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCce-EEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334445555666 6666 55666532 2333444566777777777654
No 400
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.57 E-value=4.3e-09 Score=114.30 Aligned_cols=154 Identities=16% Similarity=0.158 Sum_probs=90.9
Q ss_pred CCEEEEEc---------CCCCCcccCCcccc-CCCCCCEEEccCCCCCCCCccccc-CCCCCCEEecC--C----CcccC
Q 007935 65 NRVTSLYL---------PNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLA--H----NSFCG 127 (584)
Q Consensus 65 ~~v~~l~l---------~~~~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~ 127 (584)
.+++.|+| ..+.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |++++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 45777777 33445433222232 367777777777777765444444 47778888877 3 45542
Q ss_pred C-----CCcccCCCCCCCeeecccCCCCCCchHHhhc-cccCccEEEeccccCccccCccc-cCCCCCcEEEeecCCCcc
Q 007935 128 P-----IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLD-LRALTGTLNLSFNQFSGQIPEMY-GHFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 128 ~-----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~~l~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~ 200 (584)
. ++..+..+++|+.|+|++ .+++..+..+.. +++|+ .|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~-~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKME-MLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCC-EEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhcc-EeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 1 111245667777777766 565555555554 67777 77777777765544444 557777777777777754
Q ss_pred CCC--CCCCccccCCcccCCCC
Q 007935 201 EIP--QVGSLLNQGPTAFSGNP 220 (584)
Q Consensus 201 ~~p--~~~~~~~~~~~~~~~n~ 220 (584)
... -...+.++..+.+.+|+
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHHHHHhCCCCCEEeeeCCC
Confidence 322 11224455555666654
No 401
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.52 E-value=4.5e-08 Score=98.64 Aligned_cols=111 Identities=17% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCCCCEEEccCCCCCCCCccccc--CCCCCCEEecCC--CcccCC-----CCccc--CCCCCCCeeecccCCCCCCchHH
Q 007935 88 LNSLTRLSLASNNFSKPIPANLF--NATNLVYLDLAH--NSFCGP-----IPDRI--KTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 88 l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
+++|++|+|..|.++...-..+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 45555555555554432222222 455666665542 221111 01111 23556666666666655333333
Q ss_pred hh---ccccCccEEEeccccCccc----cCccccCCCCCcEEEeecCCCc
Q 007935 157 LL---DLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 157 ~~---~l~~L~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
+. .+++|+ .|+|+.|.|++. ++..+.++++|+.|+|++|.|+
T Consensus 272 la~a~~~~~L~-~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 272 FLESDILPQLE-TMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHCSSGGGCS-EEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHhCccCCCCC-EEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 33 345566 666666666542 2333344556666666666554
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=2.3e-08 Score=90.85 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=88.2
Q ss_pred CCEEEEEcCCC-CCccc----CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CCc
Q 007935 65 NRVTSLYLPNR-NLTGY----MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IPD 131 (584)
Q Consensus 65 ~~v~~l~l~~~-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 131 (584)
..+++|+|++| ++... +...+...++|++|+|++|.|... +...+...++|++|+|++|+|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57999999999 88743 455677789999999999999742 344455668999999999999753 456
Q ss_pred ccCCCCCCCeeec--ccCCCCCC----chHHhhccccCccEEEeccccCc
Q 007935 132 RIKTLKNLTHLDL--SSNLLNGS----LPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 132 ~~~~l~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
.+...++|+.|+| ++|.|+.. +...+...+.|+ .|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~-~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLL-KFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCC-EEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcC-EEeccCCCCC
Confidence 6778889999999 88999743 345566668999 9999999986
No 403
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.47 E-value=6.8e-08 Score=97.16 Aligned_cols=102 Identities=7% Similarity=0.019 Sum_probs=65.6
Q ss_pred cceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcc-------------hhhHhH--------HHHHHHHHhcCC
Q 007935 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------------WRFKDF--------ESEVEAIARVQH 404 (584)
Q Consensus 346 ~~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~-------------~~~~~f--------~~Ei~~l~~l~H 404 (584)
....||+|++|.||+|...++ +.||||.++..... ...... .+|...|.++.+
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G------~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKG------KQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTC------CEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCEeeeCCceEEEEEECCCC------CEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999998766 79999988643110 001122 245555666644
Q ss_pred CceeeeeEEEEeCCceeEeeecccCCcHH-------------------HHHhcc--cccccCCCCccccccC
Q 007935 405 PNIVRLKAFYYANDEKLLISDFIRNGSLY-------------------AALHGF--GLNRLLPGTSKVTKNE 455 (584)
Q Consensus 405 pnIV~l~g~~~~~~~~~lV~Ey~~~GsL~-------------------~~L~~~--g~~~~~~~~~~i~~~~ 455 (584)
.++....-+.. ...+|||||+++++|. .++|.. .|+|+++.|+.+..++
T Consensus 173 ~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 173 EGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp TTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred cCCCCCeeeec--cCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence 43322111111 2347999999998873 344544 4789999999887765
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.38 E-value=6.2e-08 Score=105.12 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=93.0
Q ss_pred CCEEEEEcCCCCCcccCCcccc-CCCCCCEEEccCC-CCCCC-CcccccCCCCCCEEecCCCcccCCCCccc----CCCC
Q 007935 65 NRVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASN-NFSKP-IPANLFNATNLVYLDLAHNSFCGPIPDRI----KTLK 137 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~l~ 137 (584)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688899998888877666665 6889999999888 55432 44444578899999999998876544433 3667
Q ss_pred CCCeeecccCC--CCC-CchHHhhccccCccEEEeccc-cCccccCccccCCCCCcEEEeecC
Q 007935 138 NLTHLDLSSNL--LNG-SLPEFLLDLRALTGTLNLSFN-QFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 138 ~L~~L~ls~N~--l~~-~~p~~~~~l~~L~~~l~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|+.|+|++|. ++. .++..+.++++|+ .|+|++| .+.+ +|..+.++++|+.|+++.+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~-~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLK-SLKLNRAVPLEK-LATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCC-EEECCTTSCHHH-HHHHHHHCTTCSEEECSBC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCc-EEecCCCCcHHH-HHHHHhcCCcceEcccccc
Confidence 89999999887 221 1222334568888 8999888 4443 7778888888888886554
No 405
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.25 E-value=4.9e-06 Score=85.19 Aligned_cols=127 Identities=14% Similarity=0.194 Sum_probs=86.9
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.++.+.|.+ ++...-+..|.++++|+.++|++|+++. +|...+..++|+.+.|..| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 366677764 5665556677788888888888888774 5544445677888888744 554555677888888888887
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCCc
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (584)
.| ++..-...|.+ ..|+ .+.| .|.++..-...|.++++|+.+++.+|.+.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~-~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGIT-TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTT-CCCS-EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-ccCcccccccc-CCcc-EEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 65 44233344555 6777 7777 45566555677888888888888887765
No 406
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.24 E-value=3.9e-06 Score=85.90 Aligned_cols=124 Identities=10% Similarity=0.134 Sum_probs=83.0
Q ss_pred CCEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeec
Q 007935 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (584)
Q Consensus 65 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 144 (584)
.+++.++|++|+++......|. ..+|+.+.|.+| ++..-...|.++++|+.++|..| ++..-...|.+ .+|+.++|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4688999999988865556665 588888888844 66555667788888888888765 44333445555 56777777
Q ss_pred ccCCCCCCchHHhhccccCccEEEeccccCc-----cccCccccCCCCCcEEEee
Q 007935 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFS-----GQIPEMYGHFPVMVSLDLR 194 (584)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~-----~~~p~~~~~l~~L~~L~l~ 194 (584)
.|.++..-+..|.++++|+ .+++.+|.+. ...+..|.++++|+.++|.
T Consensus 256 -p~~i~~I~~~aF~~c~~L~-~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELA-EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCC-EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred -CCCccEEChhHhhCCCCCC-EEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 3445433455666777777 7777666554 3445566667777777766
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.12 E-value=1.1e-06 Score=88.58 Aligned_cols=132 Identities=17% Similarity=0.196 Sum_probs=79.9
Q ss_pred CCEEEEEcCCCCCc---------ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccC-
Q 007935 65 NRVTSLYLPNRNLT---------GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK- 134 (584)
Q Consensus 65 ~~v~~l~l~~~~l~---------~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~- 134 (584)
.+++.|.+.++... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777654331 224455667788888888877311 2333 3 377888888887776533222332
Q ss_pred -CCCCCCeeeccc--CCCCCC--c---hHHh--hccccCccEEEeccccCccccCcccc---CCCCCcEEEeecCCCcc
Q 007935 135 -TLKNLTHLDLSS--NLLNGS--L---PEFL--LDLRALTGTLNLSFNQFSGQIPEMYG---HFPVMVSLDLRNNNLSG 200 (584)
Q Consensus 135 -~l~~L~~L~ls~--N~l~~~--~---p~~~--~~l~~L~~~l~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~ 200 (584)
.+++|+.|+|+. |...+. + ...+ ..+++|+ .|+|++|++++..+..+. .+++|+.|+|+.|.|++
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr-~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLK-WLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCC-EEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcC-EEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 678888888753 222111 1 1112 2467788 888888887654333332 46788888888888775
No 408
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=4.3e-05 Score=67.65 Aligned_cols=34 Identities=3% Similarity=-0.050 Sum_probs=17.0
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEecCCC
Q 007935 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHN 123 (584)
Q Consensus 90 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 123 (584)
.|+.|||+++.++..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4666666666654322223344445555555444
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.34 E-value=5.8e-05 Score=66.79 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=43.3
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCC-CCCCCcccccCC----CCCCEEecCCCc-ccCCCCcccCCCCCC
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNN-FSKPIPANLFNA----TNLVYLDLAHNS-FCGPIPDRIKTLKNL 139 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 139 (584)
++++|||+++.++..--..+..+++|++|+|++|. |+..-=..+..+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46777777666654433445666677777777663 443211223332 246666666653 442211234455666
Q ss_pred CeeecccC
Q 007935 140 THLDLSSN 147 (584)
Q Consensus 140 ~~L~ls~N 147 (584)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666655
No 410
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.33 E-value=5.7e-05 Score=68.16 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=47.7
Q ss_pred CCCCCEEEccCC-CCCCC----CcccccCCCCCCEEecCCCcccC----CCCcccCCCCCCCeeecccCCCCCC----ch
Q 007935 88 LNSLTRLSLASN-NFSKP----IPANLFNATNLVYLDLAHNSFCG----PIPDRIKTLKNLTHLDLSSNLLNGS----LP 154 (584)
Q Consensus 88 l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~----~p 154 (584)
-+.|++|+|++| .|... +-..+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555553 44311 22233334455555555555542 1222233344555566666555421 11
Q ss_pred HHhhccccCccEEEeccc---cCcc----ccCccccCCCCCcEEEeecCC
Q 007935 155 EFLLDLRALTGTLNLSFN---QFSG----QIPEMYGHFPVMVSLDLRNNN 197 (584)
Q Consensus 155 ~~~~~l~~L~~~l~l~~N---~l~~----~~p~~~~~l~~L~~L~l~~N~ 197 (584)
..+..-+.|+ .|+|++| ++.. .+-+.+..-+.|+.|+++.|.
T Consensus 120 ~aL~~N~tL~-~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RSTLVTQSIV-EFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHTTTTCCCS-EEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhhCCcee-EEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2223334455 5555543 2221 122333344556666665554
No 411
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.16 E-value=0.00012 Score=66.11 Aligned_cols=111 Identities=11% Similarity=0.157 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCC-CCccc----CCccccCCCCCCEEEccCCCCCCC----CcccccCCCCCCEEecCCCcccCC----CC
Q 007935 64 RNRVTSLYLPNR-NLTGY----MPSELGLLNSLTRLSLASNNFSKP----IPANLFNATNLVYLDLAHNSFCGP----IP 130 (584)
Q Consensus 64 ~~~v~~l~l~~~-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p 130 (584)
...+++|+|++| +|... +...+..=+.|+.|+|++|.|... +...+..=+.|++|+|++|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 357999999986 77532 455667778999999999999742 333344557899999999999742 33
Q ss_pred cccCCCCCCCeeecccCC---CCC----CchHHhhccccCccEEEeccccCc
Q 007935 131 DRIKTLKNLTHLDLSSNL---LNG----SLPEFLLDLRALTGTLNLSFNQFS 175 (584)
Q Consensus 131 ~~~~~l~~L~~L~ls~N~---l~~----~~p~~~~~l~~L~~~l~l~~N~l~ 175 (584)
..+..-+.|+.|+|++|. +.. .+-..+..-+.|. .|+++.|.+.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~-~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLL-RVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCC-EEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcC-eEeccCCCcc
Confidence 445666789999999763 332 1345566668898 9999988754
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.14 E-value=0.00098 Score=67.88 Aligned_cols=117 Identities=7% Similarity=0.114 Sum_probs=86.0
Q ss_pred CcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHH
Q 007935 77 LTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEF 156 (584)
Q Consensus 77 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 156 (584)
++..-...|..+..|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 33333557788889999998765443 345667888999999986 4555444567888999999999765 55344567
Q ss_pred hhccccCccEEEeccccCccccCccccCCCCCcEEEeecCCC
Q 007935 157 LLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNL 198 (584)
Q Consensus 157 ~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 198 (584)
|.++.+|+ .+.|..| ++..-...|.++++|+.+++.+|..
T Consensus 330 F~~C~~L~-~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 330 FAGCEQLE-RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTCTTCC-EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hhCCCCCC-EEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 88899998 8988655 6645567889999999999888754
No 413
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.10 E-value=0.0013 Score=62.82 Aligned_cols=80 Identities=10% Similarity=-0.020 Sum_probs=63.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey 426 (584)
..++.|+.+.||++... + ..+++|....... .....+.+|+++++.+. |..+.++++++.+.+..|+||||
T Consensus 20 ~~~~g~s~~~v~~~~~~-~------~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-N------ENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp ECCSCCSSSEEEEEECS-S------CEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred eeccCCCCCeEEEEECC-C------CcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 45677778899998754 2 5899999875321 12257899999999994 77888999999998899999999
Q ss_pred ccCCcHHHH
Q 007935 427 IRNGSLYAA 435 (584)
Q Consensus 427 ~~~GsL~~~ 435 (584)
++|.+|.+.
T Consensus 92 i~G~~l~~~ 100 (263)
T 3tm0_A 92 ADGVLCSEE 100 (263)
T ss_dssp CSSEEHHHH
T ss_pred cCCeehhhc
Confidence 999998765
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.08 E-value=0.0013 Score=63.85 Aligned_cols=74 Identities=15% Similarity=0.221 Sum_probs=58.8
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC---ceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP---NIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp---nIV~l~g~~~~~~~~~lV~ 424 (584)
+.|+.|.++.||++...++ ..++||+..... ......|.+|++.|+.++|. .+.+++++. ..++||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG------~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADG------TPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTS------CEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred eeeCCcchhheEEEEeCCC------CeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 4689999999999988766 689999875432 22236789999999999875 577888763 579999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999875
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.01 E-value=0.0011 Score=55.84 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=20.6
Q ss_pred CCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCC
Q 007935 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLN 150 (584)
Q Consensus 114 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 150 (584)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555443444555666666666666553
No 416
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.94 E-value=0.0021 Score=65.44 Aligned_cols=87 Identities=5% Similarity=0.104 Sum_probs=54.6
Q ss_pred cccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCC
Q 007935 106 PANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHF 185 (584)
Q Consensus 106 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l 185 (584)
...|.++.+|+.+.+..+..+ .-...|.++.+|+.+.+. +.++..-...|.++.+|+ .++|..| ++..-...|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~-~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLK-SIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCC-EEECCTT-CCEECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcC-EEEeCCc-ccEehHhHhhCC
Confidence 345667777777777655443 334566777777777775 344423345667777777 7777654 443445667777
Q ss_pred CCCcEEEeecC
Q 007935 186 PVMVSLDLRNN 196 (584)
Q Consensus 186 ~~L~~L~l~~N 196 (584)
++|+.+.+..+
T Consensus 334 ~~L~~i~ip~s 344 (394)
T 4gt6_A 334 EQLERIAIPSS 344 (394)
T ss_dssp TTCCEEEECTT
T ss_pred CCCCEEEECcc
Confidence 77777777543
No 417
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.89 E-value=0.0023 Score=65.16 Aligned_cols=83 Identities=10% Similarity=0.123 Sum_probs=42.5
Q ss_pred ccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCC
Q 007935 109 LFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVM 188 (584)
Q Consensus 109 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L 188 (584)
|..+.+|+.+.+..| ++..-...|.++.+|+.++|.++ ++..-...|.++.+|+ .+++..| ++..-...|.++++|
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS-NINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC-EECCCTT-CCEECTTTBTTCTTC
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC-EEEECcc-ccEehHHHhhCCCCC
Confidence 444555555555433 33222344555666666666433 4422234555666666 5666544 443344556666666
Q ss_pred cEEEeec
Q 007935 189 VSLDLRN 195 (584)
Q Consensus 189 ~~L~l~~ 195 (584)
+.+++..
T Consensus 369 ~~i~lp~ 375 (394)
T 4fs7_A 369 KKVELPK 375 (394)
T ss_dssp CEEEEEG
T ss_pred CEEEECC
Confidence 6666543
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.85 E-value=0.0022 Score=64.90 Aligned_cols=110 Identities=10% Similarity=0.105 Sum_probs=62.0
Q ss_pred CccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhccc
Q 007935 82 PSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLR 161 (584)
Q Consensus 82 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 161 (584)
...+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555666666666543 33233445566666766666554 33233445666666666666543 3322334556666
Q ss_pred cCccEEEeccccCccccCccccCCCCCcEEEeec
Q 007935 162 ALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRN 195 (584)
Q Consensus 162 ~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 195 (584)
+|+ .+.+.+|.++..-...|.++++|+.+.|..
T Consensus 287 ~L~-~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 287 NLT-KVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TCC-EEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccc-cccccccccceehhhhhcCCCCCCEEEcCc
Confidence 666 666666666644455666666666666643
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.83 E-value=0.0019 Score=54.23 Aligned_cols=57 Identities=26% Similarity=0.261 Sum_probs=45.4
Q ss_pred EEEEcCCCCCc-ccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCccc
Q 007935 68 TSLYLPNRNLT-GYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126 (584)
Q Consensus 68 ~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 126 (584)
+.++.++++|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888887 35565432 37999999999999755666788999999999999875
No 420
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.67 E-value=0.0021 Score=60.90 Aligned_cols=73 Identities=8% Similarity=0.150 Sum_probs=56.7
Q ss_pred eeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc--eeeeeEEEEeCCceeEeeeccc
Q 007935 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN--IVRLKAFYYANDEKLLISDFIR 428 (584)
Q Consensus 351 G~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn--IV~l~g~~~~~~~~~lV~Ey~~ 428 (584)
+.|..+.||++...++ ..+++|..... ....+.+|+++++.+++.+ +.+++++...++..++||||++
T Consensus 29 ~gg~~~~v~~~~~~~g------~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGR------PVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp CTTSSCEEEEEECTTS------CCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred cCCCCceEEEEecCCC------CeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 3555699999976544 57999987653 1256889999999996544 5568998888888999999999
Q ss_pred CCcHH
Q 007935 429 NGSLY 433 (584)
Q Consensus 429 ~GsL~ 433 (584)
|.+|.
T Consensus 99 G~~l~ 103 (264)
T 1nd4_A 99 GQDLL 103 (264)
T ss_dssp SEETT
T ss_pred CcccC
Confidence 98874
No 421
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.38 E-value=0.0043 Score=63.06 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=79.1
Q ss_pred ccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecccCCCCCCchHHhhcccc
Q 007935 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162 (584)
Q Consensus 83 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 162 (584)
..|..+.+|+.+.+..+ ++..-...|.++++|+.++|..+ ++..-...|.++.+|+.++|..| ++..-...|.++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 35667788888888754 65444567889999999999755 66444678999999999999887 66445678999999
Q ss_pred CccEEEeccccCccccCccccCCCCCcEE
Q 007935 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSL 191 (584)
Q Consensus 163 L~~~l~l~~N~l~~~~p~~~~~l~~L~~L 191 (584)
|+ .+++..| ++ .+...|.++++|+.+
T Consensus 368 L~-~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 368 LK-KVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CC-EEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CC-EEEECCC-CE-EhhheecCCCCCcEE
Confidence 99 9999766 33 345678888888765
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.37 E-value=0.0056 Score=61.80 Aligned_cols=126 Identities=12% Similarity=0.112 Sum_probs=95.7
Q ss_pred CEEEEEcCCCCCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeecc
Q 007935 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (584)
Q Consensus 66 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 145 (584)
.+..+.+..+ +...-...+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++.+|+.+++.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4566666433 44445667888999999999866 65444567888999999999754 543445678999999999999
Q ss_pred cCCCCCCchHHhhccccCccEEEeccccCccccCccccCCCCCcEEEeecC
Q 007935 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNN 196 (584)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 196 (584)
+|.++..-...|.++.+|+ .++|..| ++..-...|.++++|+.+.+..+
T Consensus 295 ~~~i~~I~~~aF~~c~~L~-~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLS-SVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEECTTTTTTCTTCC-EEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccceehhhhhcCCCCCC-EEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9988845567899999999 9999765 66455678999999998877543
No 423
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=96.06 E-value=0.0077 Score=60.27 Aligned_cols=78 Identities=12% Similarity=0.156 Sum_probs=55.7
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEec--CCCcchhhHhHHHHHHHHHhcC--CCceeeeeEEEEeC---Cce
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT--EGDATWRFKDFESEVEAIARVQ--HPNIVRLKAFYYAN---DEK 420 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~--~~~~~~~~~~f~~Ei~~l~~l~--HpnIV~l~g~~~~~---~~~ 420 (584)
+.++.|.++.||+....+ ..+++|+.. ..........+.+|+.+++.++ +..+.++++++.+. +..
T Consensus 44 ~~l~~G~sn~~y~v~~~~-------~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~ 116 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-------QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA 116 (359)
T ss_dssp EECCC-CCSCEEEEECSS-------CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred EEcCCcccceEEEEEECC-------ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence 458899999999988654 467788776 3321122357889999999996 45688999988776 458
Q ss_pred eEeeecccCCcH
Q 007935 421 LLISDFIRNGSL 432 (584)
Q Consensus 421 ~lV~Ey~~~GsL 432 (584)
|+||||++|..+
T Consensus 117 ~~vme~v~G~~l 128 (359)
T 3dxp_A 117 FYIMEFVSGRVL 128 (359)
T ss_dssp EEEEECCCCBCC
T ss_pred EEEEEecCCeec
Confidence 999999998766
No 424
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.04 E-value=0.0091 Score=38.63 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=14.1
Q ss_pred cEEEeehhHHHHHHHHhhhheeeeehh
Q 007935 271 SVVVSVISGVSVVVGVVSVSVWLFRRK 297 (584)
Q Consensus 271 ~iv~~vv~~~~~vl~vv~~~~~~~~r~ 297 (584)
.|++++++|++++++++++++++.+||
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 456666666666554444443443333
No 425
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=94.03 E-value=0.12 Score=48.99 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=58.1
Q ss_pred ceeecCc-eEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEeeecc
Q 007935 350 VGKSKNG-IMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFI 427 (584)
Q Consensus 350 iG~G~~g-~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~Ey~ 427 (584)
+..|..| .||+.....++ ..+.+|+-... ...++.+|...|+.+. +--+.++++++.+.+..++|||++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~-----~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNA-----PELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp EECSSSSCEEEEEECCTTC-----CCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred ccCCCcCCeEEEEEecCCC-----eEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 4455555 68988776554 57888876542 2267889999999884 334678899999999999999999
Q ss_pred cCCcHHHHH
Q 007935 428 RNGSLYAAL 436 (584)
Q Consensus 428 ~~GsL~~~L 436 (584)
++.++.+..
T Consensus 103 ~G~~~~~~~ 111 (272)
T 4gkh_A 103 PGKTAFQVL 111 (272)
T ss_dssp CSEEHHHHH
T ss_pred CCccccccc
Confidence 998876543
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=93.31 E-value=0.11 Score=52.64 Aligned_cols=76 Identities=8% Similarity=0.117 Sum_probs=50.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCc------chhhHhHHHHHHHHHhcCC--Cc-eeeeeEEEEeCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQH--PN-IVRLKAFYYAND 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~f~~Ei~~l~~l~H--pn-IV~l~g~~~~~~ 418 (584)
+.+|.|..+.||++....++ +.|+||....... ....+++.+|.++++.+.+ |. +.+++.+ +.+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~-----~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~ 108 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHD-----RALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE 108 (397)
T ss_dssp EECCSSSSEEEEEEEC---------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred EECCCCceEEEEEEEECCCC-----cEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence 46899999999999765433 6799998653211 1123567889999988742 44 3455543 456
Q ss_pred ceeEeeecccCC
Q 007935 419 EKLLISDFIRNG 430 (584)
Q Consensus 419 ~~~lV~Ey~~~G 430 (584)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 678999999864
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=93.04 E-value=0.21 Score=48.65 Aligned_cols=74 Identities=9% Similarity=0.052 Sum_probs=58.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..|+.|....+|+....+ ..++||+.... ....|.+|.+.|+.+. ...+.++++++...+..++||
T Consensus 42 ~~l~gG~~n~~y~v~~~~-------~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDEV-------QTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEESSS-------CEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred EEeCCccceeeeEEEECC-------CeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 357889999999987532 57788877542 1367899999998883 367889999988888899999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998865
No 428
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.81 E-value=0.01 Score=38.31 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=14.9
Q ss_pred ccEEEeehhHHHHHHHHhhhheeeeehh
Q 007935 270 GSVVVSVISGVSVVVGVVSVSVWLFRRK 297 (584)
Q Consensus 270 ~~iv~~vv~~~~~vl~vv~~~~~~~~r~ 297 (584)
..|++++++|+++++++++..++++|||
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 4566666666666554444444444433
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=92.48 E-value=0.34 Score=46.39 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=53.4
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC---ceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP---NIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp---nIV~l~g~~~~~~~~~lV~ 424 (584)
..+|.|..+.||+.+..++ +.|.||+...... .....|.+|+..|+.+.-- -+.+.+++ +..++||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG------~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~ 89 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADG------TPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTS------CEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred EecCCCCCeEEEEEEECCC------CEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence 4589999999999999887 7899998764322 2225688999999988421 34455543 2458999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++.+..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987754
No 430
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=91.65 E-value=0.022 Score=58.92 Aligned_cols=57 Identities=9% Similarity=0.045 Sum_probs=15.3
Q ss_pred CceEEEEEecCCCCCCCceEEEE------EEecCCC-cchhhHhHHHHHHHHHhcCCCceeeeeEEEEe
Q 007935 355 NGIMYKVVVGRGSGMGAPTVVAV------RRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (584)
Q Consensus 355 ~g~Vy~~~~~~~~~~~~~~~vAv------K~l~~~~-~~~~~~~f~~Ei~~l~~l~HpnIV~l~g~~~~ 416 (584)
||.||+|.+.... ..||| |..+... ..+..+.|.+|..++...+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~-----~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKH-----MPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC--------------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccC-----CchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 9999999986532 57888 7776542 23334679999999999999999999998764
No 431
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=90.27 E-value=0.24 Score=48.37 Aligned_cols=70 Identities=9% Similarity=0.075 Sum_probs=51.2
Q ss_pred ceeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC----CceeeeeEEEEeCCceeE
Q 007935 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH----PNIVRLKAFYYANDEKLL 422 (584)
Q Consensus 347 ~~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H----pnIV~l~g~~~~~~~~~l 422 (584)
...++.|..+.||+. + ..+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++
T Consensus 42 v~~l~~G~~n~vy~v----g------~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----N------EQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp EEEEEECSSEEEEEE----T------TTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred EEeCCCCCCceEEEE----C------CEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 456899999999998 2 457788764421 12568999999999976 224455554 67899
Q ss_pred eeecccCCcHH
Q 007935 423 ISDFIRNGSLY 433 (584)
Q Consensus 423 V~Ey~~~GsL~ 433 (584)
||||++|.++.
T Consensus 105 vme~i~G~~l~ 115 (320)
T 3r70_A 105 IMKYIKGERIT 115 (320)
T ss_dssp EEECCCCBCCC
T ss_pred EEeecCCcccc
Confidence 99999998875
No 432
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=89.69 E-value=1 Score=44.79 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=54.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc--eeeeeEEEEeC-CceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN--IVRLKAFYYAN-DEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn--IV~l~g~~~~~-~~~~lV~ 424 (584)
..++.|....+|+.... + ..+++|..... ..+.+|+.++..+.... +.++++++... +..|+||
T Consensus 47 ~~l~gG~~n~~y~v~~~-g------~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVG-G------RGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp EEEEECSSEEEEEEEET-T------EEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred EECCCCCcceEEEEEEC-C------cEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 45788999999998753 3 68888877532 35889999999986533 56777777765 6689999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++|.++
T Consensus 114 e~l~G~~l 121 (362)
T 3ovc_A 114 RRAQGVTL 121 (362)
T ss_dssp ECCCSEET
T ss_pred EecCCCCc
Confidence 99997655
No 433
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=86.54 E-value=0.78 Score=44.31 Aligned_cols=74 Identities=9% Similarity=-0.003 Sum_probs=53.1
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCC---ceeeeeEEEE-eCCceeEe
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP---NIVRLKAFYY-ANDEKLLI 423 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hp---nIV~l~g~~~-~~~~~~lV 423 (584)
..++.|....||+. + ..++||.... ......+.+|+++|..+.+. .+.+.+.++. ..+..++|
T Consensus 25 ~~l~~G~~n~v~~v----g------~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v 91 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----N------GDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVG 91 (306)
T ss_dssp EEEEECSSEEEEEE----T------TTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEE
T ss_pred eecCCCcceeEEEE----C------CEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEE
Confidence 35778888899987 2 3577787532 22336789999999999653 3566777764 35568899
Q ss_pred eecccCCcHHH
Q 007935 424 SDFIRNGSLYA 434 (584)
Q Consensus 424 ~Ey~~~GsL~~ 434 (584)
|||++|..+.+
T Consensus 92 ~e~i~G~~l~~ 102 (306)
T 3tdw_A 92 YRKVQGQILGE 102 (306)
T ss_dssp EECCCSEECHH
T ss_pred EeccCCeECch
Confidence 99999987754
No 434
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=84.71 E-value=0.69 Score=45.69 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=54.3
Q ss_pred ec-eeecCceEEEEEecCC-CCCCCceEEEEEEecCCCc--chhhHhHHHHHHHHHhcC-C--CceeeeeEEEEeC---C
Q 007935 349 VV-GKSKNGIMYKVVVGRG-SGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQ-H--PNIVRLKAFYYAN---D 418 (584)
Q Consensus 349 ~i-G~G~~g~Vy~~~~~~~-~~~~~~~~vAvK~l~~~~~--~~~~~~f~~Ei~~l~~l~-H--pnIV~l~g~~~~~---~ 418 (584)
.| +.|....+|+...... .+......+++|....... ......+.+|+.+++.++ + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 7788889998876400 0000015788887654220 101256889999999884 3 3577888887655 3
Q ss_pred ceeEeeecccCCcHH
Q 007935 419 EKLLISDFIRNGSLY 433 (584)
Q Consensus 419 ~~~lV~Ey~~~GsL~ 433 (584)
..++||||++|..+.
T Consensus 107 ~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 107 TPFFLMDYVEGVVPP 121 (357)
T ss_dssp SCEEEEECCCCBCCC
T ss_pred CceEEEEecCCCChh
Confidence 578999999986543
No 435
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.78 E-value=0.1 Score=33.52 Aligned_cols=7 Identities=14% Similarity=0.629 Sum_probs=2.7
Q ss_pred EEEeehh
Q 007935 272 VVVSVIS 278 (584)
Q Consensus 272 iv~~vv~ 278 (584)
+++++++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333333
No 436
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=77.00 E-value=1.3 Score=42.53 Aligned_cols=73 Identities=12% Similarity=0.096 Sum_probs=49.2
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCc--eeeeeEEEEeCC---cee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPN--IVRLKAFYYAND---EKL 421 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-Hpn--IV~l~g~~~~~~---~~~ 421 (584)
+.++.|....||+.. ..+++|..... .....+.+|+++++.+. +.. +.+.++.....+ ..|
T Consensus 26 ~~~~~G~~n~v~~v~----------~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~ 92 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----------RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSF 92 (304)
T ss_dssp CEEEECSSEEEEEST----------TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSC
T ss_pred EecCCCCcceEEEEC----------CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcce
Confidence 358899999999853 24778876532 23367899999999884 333 344444433332 358
Q ss_pred EeeecccCCcHH
Q 007935 422 LISDFIRNGSLY 433 (584)
Q Consensus 422 lV~Ey~~~GsL~ 433 (584)
+||||++|.+|.
T Consensus 93 ~vm~~i~G~~l~ 104 (304)
T 3sg8_A 93 AGFTKIKGVPLT 104 (304)
T ss_dssp EEEECCCCEECC
T ss_pred EEEcccCCeECC
Confidence 999999998764
No 437
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=76.12 E-value=0.28 Score=30.63 Aligned_cols=8 Identities=13% Similarity=0.430 Sum_probs=3.0
Q ss_pred cEEEeehh
Q 007935 271 SVVVSVIS 278 (584)
Q Consensus 271 ~iv~~vv~ 278 (584)
.+++++++
T Consensus 12 aIAGiVvG 19 (38)
T 2k1k_A 12 EIVAVIFG 19 (38)
T ss_dssp HHHHHHHH
T ss_pred ceeeeehH
Confidence 34333333
No 438
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=69.65 E-value=8.6 Score=37.12 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=42.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-----CCceeeee-E--EEEeCCc
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----HPNIVRLK-A--FYYANDE 419 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-----HpnIV~l~-g--~~~~~~~ 419 (584)
..|+.|..+.||+....++ .+++|+.... . +++..|+.++..+. .|.++... | +....+.
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-------~~vlk~~~~~--~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~ 105 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-------AVCLKRIHRP--E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSF 105 (346)
T ss_dssp EECC----CEEEEEEETTE-------EEEEEEECSC--H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTE
T ss_pred eeccccccCcEEEEEeCCC-------CEEEEecCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCE
Confidence 3466677889999886543 5889988752 1 33445555555542 34444311 1 1234667
Q ss_pred eeEeeecccCCcH
Q 007935 420 KLLISDFIRNGSL 432 (584)
Q Consensus 420 ~~lV~Ey~~~GsL 432 (584)
.++||||++|..+
T Consensus 106 ~~~l~~~i~G~~~ 118 (346)
T 2q83_A 106 LFVVYDWIEGRPF 118 (346)
T ss_dssp EEEEEECCCCBCC
T ss_pred EEEEEEeecCccC
Confidence 8999999998654
No 439
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=68.70 E-value=0.76 Score=29.24 Aligned_cols=11 Identities=36% Similarity=0.486 Sum_probs=5.1
Q ss_pred EEEeehhHHHH
Q 007935 272 VVVSVISGVSV 282 (584)
Q Consensus 272 iv~~vv~~~~~ 282 (584)
+++++++|+++
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 44444444444
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=65.53 E-value=12 Score=35.81 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=48.1
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCC--CceeeeeEE-----EEeCCcee
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--PNIVRLKAF-----YYANDEKL 421 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~H--pnIV~l~g~-----~~~~~~~~ 421 (584)
.++ |....||+....++ +.+++|........ .+.+.+|..++..+.. -.+++++.. ....+..+
T Consensus 33 ~l~-g~~n~~y~v~~~~g------~~~vlK~~~~~~~~--~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~ 103 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDR------RRFVVKFYRPERWT--ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYF 103 (328)
T ss_dssp EEC-CSSSEEEEECCTTC------CCEEEEEECTTTSC--HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEE
T ss_pred eec-CcccceEEEEcCCC------CEEEEEEcCCCCCC--HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEE
Confidence 355 77788998876554 56889988643221 2567788888887742 224455543 22245568
Q ss_pred EeeecccCCcH
Q 007935 422 LISDFIRNGSL 432 (584)
Q Consensus 422 lV~Ey~~~GsL 432 (584)
+||||++|..+
T Consensus 104 ~l~~~i~G~~~ 114 (328)
T 1zyl_A 104 AVFPSVGGRQF 114 (328)
T ss_dssp EEEECCCCEEC
T ss_pred EEEEecCCCCC
Confidence 89999987543
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=62.82 E-value=12 Score=33.84 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=22.3
Q ss_pred cccCccccccCCCCCCccchhhHHHHHHHHHhCCCC
Q 007935 472 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 507 (584)
Q Consensus 472 ~y~aPE~~~~~~~~~~ksDV~SfGvvl~ElltG~~p 507 (584)
.+.+||... ...+.+.=|||+|+++|..+-=..|
T Consensus 102 ~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 102 PPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 377899742 3567888999999999999874433
No 442
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=58.78 E-value=17 Score=36.49 Aligned_cols=73 Identities=11% Similarity=0.120 Sum_probs=44.5
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCC-----Cc-c--hhhHhHHHHHHHHH-hcCCCceeeeeEEEEeCC
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-----DA-T--WRFKDFESEVEAIA-RVQHPNIVRLKAFYYAND 418 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~-----~~-~--~~~~~f~~Ei~~l~-~l~HpnIV~l~g~~~~~~ 418 (584)
..+|.|..+.||++... + ..++||..... .. . .....+..|+..+. ...+..+.+++.+. .+
T Consensus 40 ~~l~~G~~n~vyrv~~~-~------~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~ 110 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVGS-S------GSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RT 110 (420)
T ss_dssp EECCCSSSCEEEEEECS-S------CEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TT
T ss_pred EEccCCCcEEEEEEEcC-C------ceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CC
Confidence 45888999999999642 2 57899943211 11 1 11233444544332 22335667777665 57
Q ss_pred ceeEeeecc-cC
Q 007935 419 EKLLISDFI-RN 429 (584)
Q Consensus 419 ~~~lV~Ey~-~~ 429 (584)
..++||||+ ++
T Consensus 111 ~~~lv~e~l~~g 122 (420)
T 2pyw_A 111 MALIGMRYLEPP 122 (420)
T ss_dssp TTEEEECCCCTT
T ss_pred ccEEEEeecCCc
Confidence 789999999 76
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=51.97 E-value=13 Score=36.97 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=45.2
Q ss_pred eeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+..|-...+|++....+.. ......+.+|+..... .....+.+|..+++.+. +.-..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 346667788899988753100 0112578888863321 12356779999998884 3334566666533 2999
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++|..|
T Consensus 130 e~i~G~~l 137 (379)
T 3feg_A 130 QYIPSRPL 137 (379)
T ss_dssp ECCSEEEC
T ss_pred EEecCccC
Confidence 99998655
No 444
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=47.16 E-value=17 Score=36.77 Aligned_cols=78 Identities=9% Similarity=0.114 Sum_probs=48.8
Q ss_pred eeceeecCceEEEEEecCCCC--CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc-eeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN-IVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~--~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn-IV~l~g~~~~~~~~~lV~ 424 (584)
..|+.|....+|++...++.. ......+.+|+...... .+.+.+|..++..+...+ ..++++.+. + .+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 346778888999998754210 00115788888743211 145668999999884333 356776553 2 3899
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 445
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=45.39 E-value=31 Score=33.10 Aligned_cols=77 Identities=8% Similarity=0.049 Sum_probs=39.8
Q ss_pred eceeecCce-EEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-C-CceeeeeEEEEeCCceeEeee
Q 007935 349 VVGKSKNGI-MYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-H-PNIVRLKAFYYANDEKLLISD 425 (584)
Q Consensus 349 ~iG~G~~g~-Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-H-pnIV~l~g~~~~~~~~~lV~E 425 (584)
.|+.|.... +|+....++ ..+.+|....... +++..|+.++..+. + -.+.+++.+.. +.-++|||
T Consensus 25 ~l~gg~s~~~~~r~~~~~~------~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e 92 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTG------AKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIE 92 (333)
T ss_dssp C--------CCEEEECTTC------CEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEEC
T ss_pred ECCCCCCCceEEEEEcCCC------CeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEe
Confidence 354554444 667764323 4566665433211 34556777777763 2 23556666633 23378999
Q ss_pred cccCCcHHHHHh
Q 007935 426 FIRNGSLYAALH 437 (584)
Q Consensus 426 y~~~GsL~~~L~ 437 (584)
++.+..+.+++.
T Consensus 93 ~l~~~~l~~~l~ 104 (333)
T 3csv_A 93 DLGDALFTEVIN 104 (333)
T ss_dssp CCCSCBHHHHHH
T ss_pred eCCCcchHHHhc
Confidence 998777765553
No 446
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=44.27 E-value=35 Score=32.43 Aligned_cols=74 Identities=4% Similarity=-0.063 Sum_probs=43.3
Q ss_pred eceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc--eeeeeEE------EEeCCce
Q 007935 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN--IVRLKAF------YYANDEK 420 (584)
Q Consensus 349 ~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn--IV~l~g~------~~~~~~~ 420 (584)
.|+.|....+|+....++ .+++|....... .+.+..|+.++..++... +.+++.. ....+..
T Consensus 29 ~i~~G~~n~~~~v~~~~g-------~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~ 98 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-------PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRP 98 (322)
T ss_dssp EECC---EEEEEEEESSC-------CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEE
T ss_pred ccCCCcccceEEEEeCCc-------cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEE
Confidence 466777788999876543 477888765311 145667888887773212 3333321 1234567
Q ss_pred eEeeecccCCcH
Q 007935 421 LLISDFIRNGSL 432 (584)
Q Consensus 421 ~lV~Ey~~~GsL 432 (584)
++||||++|..+
T Consensus 99 ~~l~~~l~G~~~ 110 (322)
T 2ppq_A 99 AALISFLEGMWL 110 (322)
T ss_dssp EEEEECCCCBCC
T ss_pred EEEEEeCCCcCC
Confidence 899999998653
No 447
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=43.67 E-value=43 Score=34.04 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=47.0
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCce-eeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI-VRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnI-V~l~g~~~~~~~~~lV~Ey 426 (584)
..|+.|-...+|++...+++ ..+.+|+..... ... -+-.+|..++..+...++ .++++++ .+ .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~-----~~~vLRi~g~~~-~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQ-----AKYLIRLYGPKT-DEI-INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTT-----EEEEEEEECC-C-CSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCC-----ceEEEEECCCCh-hhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEe
Confidence 45777888899999876522 578888774421 111 122589999999965444 5677766 22 359999
Q ss_pred ccCCcH
Q 007935 427 IRNGSL 432 (584)
Q Consensus 427 ~~~GsL 432 (584)
+++.+|
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987554
No 448
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.67 E-value=1e+02 Score=23.62 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=25.5
Q ss_pred CCcccCCccccCCCCCCEEEccCCCCCCCCcccccCCCCCCEEecCC
Q 007935 76 NLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH 122 (584)
Q Consensus 76 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 122 (584)
+++..-...|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344334556666666666666543 3333344566666666666654
No 449
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=36.07 E-value=47 Score=32.39 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=44.3
Q ss_pred eeceeecCceEEEEEecCCCC---CCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCc-eeeeeEEEEeCCceeEe
Q 007935 348 YVVGKSKNGIMYKVVVGRGSG---MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN-IVRLKAFYYANDEKLLI 423 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~---~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~Hpn-IV~l~g~~~~~~~~~lV 423 (584)
..++.|....+|+....+++. ......+.+|+...... ...+..+|.+++..+...+ +.++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 346778888999988654200 00114677887654311 1123467888888884333 44666543 23789
Q ss_pred eecccCCcH
Q 007935 424 SDFIRNGSL 432 (584)
Q Consensus 424 ~Ey~~~GsL 432 (584)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.72 E-value=73 Score=24.41 Aligned_cols=45 Identities=11% Similarity=-0.051 Sum_probs=23.2
Q ss_pred CCCCCcccccCCCCCCEEecCCCcccCCCCcccCCCCCCCeeeccc
Q 007935 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (584)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 146 (584)
++.+-...|.++++|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33333445566666666666543 2223334555666666665544
No 451
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=26.40 E-value=1e+02 Score=29.53 Aligned_cols=68 Identities=13% Similarity=0.063 Sum_probs=42.1
Q ss_pred eeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC---CCceeeeeEE------EEeCCcee
Q 007935 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAF------YYANDEKL 421 (584)
Q Consensus 351 G~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~---HpnIV~l~g~------~~~~~~~~ 421 (584)
|.|....||+....++ .+++|+...... .+|+.++..+. -|++.+.+.. ....+..+
T Consensus 32 G~g~~N~vy~v~~~~g-------~~vLK~~~~~~~-------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~ 97 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-------SYFIKLKYGYHD-------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKI 97 (339)
T ss_dssp TSCSSCEEEEEECSSC-------EEEEEEEECSSC-------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEE
T ss_pred cCccccceEEEEeCCC-------CEEEEEecCccc-------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEE
Confidence 4444678999876543 688887765321 35666665552 1224555432 23356789
Q ss_pred EeeecccCCcH
Q 007935 422 LISDFIRNGSL 432 (584)
Q Consensus 422 lV~Ey~~~GsL 432 (584)
+||||++|..+
T Consensus 98 ~l~~~i~G~~~ 108 (339)
T 3i1a_A 98 IAYPFIHAPNG 108 (339)
T ss_dssp EEEECCCCCBT
T ss_pred EEEeccCCCcC
Confidence 99999998765
No 452
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=25.40 E-value=56 Score=30.69 Aligned_cols=70 Identities=9% Similarity=0.201 Sum_probs=42.6
Q ss_pred eeceeecCceEEEEEecCCCCCCCceEEEEEEecCCCcchhhHhHHHHHHHHHhcCCCce-eeeeEEEEeCCceeEeeec
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI-VRLKAFYYANDEKLLISDF 426 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~HpnI-V~l~g~~~~~~~~~lV~Ey 426 (584)
+.|+.|....+|+. . .+.+|+....... .....+|+.+++.+....+ .+++++ +.+.-++|+||
T Consensus 24 ~~l~gG~tN~~~~~----~-------~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~ 88 (301)
T 3dxq_A 24 LERLGGLTNLVFRA----G-------DLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRY 88 (301)
T ss_dssp EEEESCSSEEEEEE----T-------TEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEEC
T ss_pred eEcCCcccccccee----e-------eEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEee
Confidence 45778888999998 2 3677776543111 1234578888877743233 455543 44456899999
Q ss_pred c-cCCcH
Q 007935 427 I-RNGSL 432 (584)
Q Consensus 427 ~-~~GsL 432 (584)
+ ++.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 55444
No 453
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=23.94 E-value=86 Score=31.39 Aligned_cols=79 Identities=14% Similarity=0.063 Sum_probs=47.1
Q ss_pred eeceeecCceEEEEEecCCCCC--CCceEEEEEEecCCCcchhhHhHHHHHHHHHhcC-CCceeeeeEEEEeCCceeEee
Q 007935 348 YVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (584)
Q Consensus 348 ~~iG~G~~g~Vy~~~~~~~~~~--~~~~~vAvK~l~~~~~~~~~~~f~~Ei~~l~~l~-HpnIV~l~g~~~~~~~~~lV~ 424 (584)
..+..|-...+|+.....+... .....+.+|+..... ...-+-.+|..+++.+. +.-..++++.+ . -++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 3456677888999887642110 001578888764421 11123468998888884 33345666533 2 37899
Q ss_pred ecccCCcH
Q 007935 425 DFIRNGSL 432 (584)
Q Consensus 425 Ey~~~GsL 432 (584)
||++|..|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=23.51 E-value=23 Score=24.67 Aligned_cols=8 Identities=38% Similarity=0.675 Sum_probs=3.4
Q ss_pred ehhHHHHH
Q 007935 276 VISGVSVV 283 (584)
Q Consensus 276 vv~~~~~v 283 (584)
++++++.+
T Consensus 13 vlGg~~~l 20 (70)
T 2klu_A 13 VLGGVAGL 20 (70)
T ss_dssp HHHHHHHH
T ss_pred HHhHHHHH
Confidence 44444443
No 455
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=22.00 E-value=21 Score=18.37 Aligned_cols=8 Identities=38% Similarity=1.473 Sum_probs=6.2
Q ss_pred CCcceeeE
Q 007935 54 PCHWSGIH 61 (584)
Q Consensus 54 ~c~w~gv~ 61 (584)
.|+|.|..
T Consensus 7 acswrgle 14 (23)
T 3ox7_P 7 ACSWRGLE 14 (26)
T ss_pred ccccccch
Confidence 48999874
No 456
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=22.05 E-value=28 Score=21.98 Aligned_cols=10 Identities=20% Similarity=0.498 Sum_probs=3.7
Q ss_pred EEEeehhHHH
Q 007935 272 VVVSVISGVS 281 (584)
Q Consensus 272 iv~~vv~~~~ 281 (584)
+++..+++++
T Consensus 19 ~iGL~v~gVa 28 (43)
T 2llm_A 19 IIGLMVGGVV 28 (43)
Confidence 3333333333
Done!