Query 007936
Match_columns 584
No_of_seqs 202 out of 1571
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 14:08:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 100.0 1E-133 4E-138 1098.5 52.1 487 85-584 26-526 (526)
2 3khd_A Pyruvate kinase; malari 100.0 3E-133 1E-137 1090.0 46.0 470 100-583 41-519 (520)
3 3hqn_D Pyruvate kinase, PK; TI 100.0 8E-133 3E-137 1084.8 47.5 471 101-584 16-499 (499)
4 3gr4_A Pyruvate kinase isozyme 100.0 3E-132 1E-136 1088.4 51.5 471 102-584 59-550 (550)
5 3gg8_A Pyruvate kinase; malari 100.0 3E-132 1E-136 1081.6 48.3 470 102-584 33-511 (511)
6 3t05_A Pyruvate kinase, PK; te 100.0 1E-130 4E-135 1088.8 47.2 472 96-584 14-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 5E-130 2E-134 1059.0 49.3 462 104-583 1-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 5E-127 2E-131 1062.1 51.4 463 104-583 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 2E-127 5E-132 1032.9 42.7 442 102-581 12-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 8E-125 3E-129 1026.0 43.5 470 102-583 16-500 (500)
11 1izc_A Macrophomate synthase i 99.7 1.5E-18 5.1E-23 182.1 9.3 150 286-450 107-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 8.3E-19 2.8E-23 178.1 -0.5 130 284-427 78-240 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 3.3E-18 1.1E-22 175.7 0.6 131 283-427 98-261 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.7 1.6E-16 5.4E-21 161.1 9.9 131 285-428 77-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.7 2.1E-16 7E-21 159.5 10.0 131 283-427 78-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.5 1.3E-14 4.4E-19 148.3 10.6 132 283-423 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 1.1E-11 3.8E-16 129.3 11.7 136 278-424 117-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 6E-11 2.1E-15 123.3 9.5 130 282-423 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 1.9E-10 6.5E-15 117.1 9.2 124 284-424 72-209 (273)
20 2ols_A Phosphoenolpyruvate syn 99.1 1.5E-10 5E-15 133.6 8.7 134 283-426 624-779 (794)
21 3qqw_A Putative citrate lyase; 99.0 4.8E-10 1.6E-14 117.3 10.7 135 282-423 94-254 (332)
22 2hwg_A Phosphoenolpyruvate-pro 98.9 1E-09 3.4E-14 122.3 8.9 131 283-424 371-526 (575)
23 3r4i_A Citrate lyase; TIM beta 98.9 3E-09 1E-13 111.6 11.9 131 283-423 94-253 (339)
24 2wqd_A Phosphoenolpyruvate-pro 98.9 1.3E-09 4.3E-14 121.5 8.8 127 287-424 377-528 (572)
25 3oyz_A Malate synthase; TIM ba 98.8 1.6E-08 5.6E-13 108.4 10.4 135 282-423 94-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.4 1.6E-06 5.4E-11 100.9 13.3 119 296-425 701-861 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.3 4.5E-06 1.6E-10 97.0 13.1 119 296-425 695-855 (873)
28 3cuz_A MSA, malate synthase A; 97.8 0.00013 4.4E-09 80.4 12.8 134 286-424 195-366 (532)
29 3cux_A Malate synthase; TIM ba 97.6 0.0003 1E-08 77.5 12.6 127 294-424 202-364 (528)
30 1p7t_A MSG, malate synthase G; 97.5 0.00017 6E-09 81.1 8.4 132 286-424 372-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.3 0.0011 3.6E-08 77.5 12.8 138 277-425 698-881 (913)
32 2x0s_A Pyruvate phosphate diki 96.4 0.024 8.1E-07 66.5 13.9 115 299-424 727-880 (913)
33 3f4w_A Putative hexulose 6 pho 94.0 0.3 1E-05 46.3 10.5 137 288-445 69-208 (211)
34 4af0_A Inosine-5'-monophosphat 93.9 0.77 2.6E-05 50.8 14.7 125 282-424 279-413 (556)
35 4fo4_A Inosine 5'-monophosphat 93.7 1.2 4.2E-05 46.8 15.4 124 283-424 107-240 (366)
36 3odm_A Pepcase, PEPC, phosphoe 93.6 0.11 3.8E-06 57.2 7.4 95 295-389 138-260 (560)
37 3ffs_A Inosine-5-monophosphate 93.6 0.6 2E-05 49.8 12.9 119 286-424 146-275 (400)
38 1jqo_A Phosphoenolpyruvate car 93.4 0.18 6.1E-06 59.3 9.2 100 290-389 519-638 (970)
39 1t57_A Conserved protein MTH16 92.9 0.26 8.8E-06 47.8 7.8 98 474-573 36-173 (206)
40 3khj_A Inosine-5-monophosphate 92.5 1.6 5.5E-05 45.7 14.1 119 286-424 107-236 (361)
41 1jqn_A Pepcase, PEPC, phosphoe 92.4 0.16 5.5E-06 59.2 6.8 95 295-389 467-578 (883)
42 4avf_A Inosine-5'-monophosphat 92.2 0.82 2.8E-05 49.8 11.8 123 283-424 228-361 (490)
43 1jcn_A Inosine monophosphate d 91.9 1.9 6.6E-05 46.8 14.4 121 284-425 255-388 (514)
44 3usb_A Inosine-5'-monophosphat 91.7 1.4 4.8E-05 48.2 13.0 125 283-424 255-388 (511)
45 1h1y_A D-ribulose-5-phosphate 91.6 1.4 4.9E-05 42.6 11.8 139 286-445 77-222 (228)
46 3inp_A D-ribulose-phosphate 3- 91.6 0.65 2.2E-05 46.3 9.3 140 287-444 100-243 (246)
47 4fxs_A Inosine-5'-monophosphat 91.5 3 0.0001 45.4 15.4 124 282-424 229-363 (496)
48 1ydn_A Hydroxymethylglutaryl-C 91.4 0.68 2.3E-05 46.7 9.5 154 281-446 23-196 (295)
49 1vp8_A Hypothetical protein AF 91.4 0.65 2.2E-05 44.9 8.7 98 474-573 28-166 (201)
50 2z6i_A Trans-2-enoyl-ACP reduc 91.0 1.8 6.3E-05 44.3 12.4 111 287-424 79-191 (332)
51 3r2g_A Inosine 5'-monophosphat 90.8 1.9 6.5E-05 45.3 12.4 117 283-424 99-228 (361)
52 3ovp_A Ribulose-phosphate 3-ep 90.6 0.95 3.3E-05 44.4 9.4 141 287-447 78-220 (228)
53 3ctl_A D-allulose-6-phosphate 89.6 2.8 9.6E-05 41.1 11.9 139 288-445 72-218 (231)
54 3bo9_A Putative nitroalkan dio 89.5 2.9 0.0001 42.8 12.3 112 286-424 92-205 (326)
55 3ble_A Citramalate synthase fr 89.0 2 6.7E-05 44.5 10.7 160 281-447 38-211 (337)
56 1y0e_A Putative N-acetylmannos 88.4 3.8 0.00013 38.9 11.6 137 285-441 77-218 (223)
57 1h1y_A D-ribulose-5-phosphate 88.3 3.4 0.00012 39.9 11.3 130 287-444 23-168 (228)
58 3igs_A N-acetylmannosamine-6-p 88.2 7.8 0.00027 37.9 13.9 134 285-445 90-228 (232)
59 3eeg_A 2-isopropylmalate synth 88.2 8.3 0.00029 39.6 14.7 168 265-447 14-193 (325)
60 1gte_A Dihydropyrimidine dehyd 88.0 2.6 8.8E-05 49.8 12.1 119 290-425 655-817 (1025)
61 1tqj_A Ribulose-phosphate 3-ep 87.9 1.1 3.8E-05 43.7 7.6 135 288-442 77-219 (230)
62 3rmj_A 2-isopropylmalate synth 87.9 14 0.00049 38.6 16.5 168 265-447 20-199 (370)
63 3bw2_A 2-nitropropane dioxygen 87.8 7.4 0.00025 40.3 14.2 112 286-424 112-237 (369)
64 2gjl_A Hypothetical protein PA 87.6 5.5 0.00019 40.5 12.9 114 286-424 86-201 (328)
65 2fli_A Ribulose-phosphate 3-ep 87.5 4.9 0.00017 38.0 11.7 137 288-443 76-217 (220)
66 1vrd_A Inosine-5'-monophosphat 86.4 4.5 0.00015 43.6 12.0 122 285-424 238-369 (494)
67 1yad_A Regulatory protein TENI 86.4 8.7 0.0003 36.5 12.9 133 289-445 81-213 (221)
68 3ajx_A 3-hexulose-6-phosphate 86.4 6 0.0002 37.0 11.6 131 289-442 70-204 (207)
69 2ftp_A Hydroxymethylglutaryl-C 86.2 4.3 0.00015 41.1 11.1 159 281-446 27-200 (302)
70 2c6q_A GMP reductase 2; TIM ba 86.1 3.9 0.00013 42.6 11.0 122 286-425 120-253 (351)
71 2qjg_A Putative aldolase MJ040 85.9 3.4 0.00011 40.7 9.9 46 120-165 102-149 (273)
72 4g9p_A 4-hydroxy-3-methylbut-2 85.5 4 0.00014 43.5 10.6 153 288-447 43-222 (406)
73 2qjg_A Putative aldolase MJ040 84.6 12 0.00042 36.6 13.3 134 286-446 102-259 (273)
74 1ypf_A GMP reductase; GUAC, pu 84.6 1.2 4E-05 46.0 6.0 116 284-424 106-239 (336)
75 3q58_A N-acetylmannosamine-6-p 84.2 8.1 0.00028 37.7 11.6 130 285-441 90-224 (229)
76 3cu2_A Ribulose-5-phosphate 3- 84.1 7 0.00024 38.5 11.1 135 286-443 82-235 (237)
77 3ewb_X 2-isopropylmalate synth 83.9 24 0.00081 35.7 15.3 155 280-447 23-192 (293)
78 3qja_A IGPS, indole-3-glycerol 83.6 10 0.00034 38.1 12.3 129 287-441 126-259 (272)
79 1w8s_A FBP aldolase, fructose- 83.2 6 0.0002 39.4 10.3 128 282-424 39-179 (263)
80 1eep_A Inosine 5'-monophosphat 83.1 5.2 0.00018 42.1 10.4 121 284-424 153-285 (404)
81 1ydo_A HMG-COA lyase; TIM-barr 83.1 9.8 0.00033 38.8 12.1 160 280-446 24-198 (307)
82 1f76_A Dihydroorotate dehydrog 83.0 6.6 0.00023 40.0 10.9 88 325-424 210-318 (336)
83 2cw6_A Hydroxymethylglutaryl-C 82.9 3.9 0.00013 41.3 9.1 160 281-447 24-198 (298)
84 2qr6_A IMP dehydrogenase/GMP r 82.1 5 0.00017 42.0 9.8 113 290-425 172-307 (393)
85 1jub_A Dihydroorotate dehydrog 81.4 13 0.00045 37.2 12.3 143 289-452 112-294 (311)
86 3jr2_A Hexulose-6-phosphate sy 81.2 3.6 0.00012 39.4 7.6 138 288-445 75-214 (218)
87 1ka9_F Imidazole glycerol phos 80.8 11 0.00036 36.4 11.0 134 285-439 86-241 (252)
88 3ivs_A Homocitrate synthase, m 80.6 21 0.00073 38.2 14.0 154 280-446 57-221 (423)
89 2yw3_A 4-hydroxy-2-oxoglutarat 80.3 15 0.00053 35.0 11.8 102 286-423 28-130 (207)
90 1rpx_A Protein (ribulose-phosp 80.0 17 0.00057 34.7 12.0 112 286-424 26-147 (230)
91 3nvt_A 3-deoxy-D-arabino-heptu 79.3 13 0.00044 39.3 11.7 113 286-424 159-283 (385)
92 1vhc_A Putative KHG/KDPG aldol 79.3 14 0.00048 35.9 11.2 103 287-423 33-136 (224)
93 1zfj_A Inosine monophosphate d 78.5 22 0.00075 38.0 13.6 125 284-424 233-365 (491)
94 1tqx_A D-ribulose-5-phosphate 78.4 5.3 0.00018 39.1 7.9 130 297-444 86-221 (227)
95 1wbh_A KHG/KDPG aldolase; lyas 78.1 16 0.00056 35.1 11.2 103 287-423 32-135 (214)
96 2nv1_A Pyridoxal biosynthesis 77.6 15 0.00052 37.0 11.3 124 287-443 32-170 (305)
97 1n7k_A Deoxyribose-phosphate a 77.1 10 0.00035 37.4 9.6 140 279-444 31-191 (234)
98 1ep3_A Dihydroorotate dehydrog 76.9 16 0.00056 36.2 11.3 143 285-451 112-291 (311)
99 1thf_D HISF protein; thermophI 76.5 20 0.00067 34.5 11.4 135 284-440 84-241 (253)
100 1me8_A Inosine-5'-monophosphat 76.5 26 0.00091 37.9 13.5 122 286-424 244-381 (503)
101 1geq_A Tryptophan synthase alp 76.4 36 0.0012 32.6 13.3 120 286-424 98-220 (248)
102 2tps_A Protein (thiamin phosph 76.4 44 0.0015 31.3 13.7 126 289-445 87-221 (227)
103 1mxs_A KDPG aldolase; 2-keto-3 76.3 20 0.00069 34.8 11.4 103 287-423 42-145 (225)
104 1zco_A 2-dehydro-3-deoxyphosph 75.8 31 0.0011 34.3 12.9 126 286-437 40-179 (262)
105 1rpx_A Protein (ribulose-phosp 75.5 11 0.00039 35.9 9.3 136 287-441 82-224 (230)
106 1nvm_A HOA, 4-hydroxy-2-oxoval 75.3 45 0.0015 34.2 14.3 150 280-447 26-191 (345)
107 1q6o_A Humps, 3-keto-L-gulonat 74.1 25 0.00085 33.3 11.3 134 291-444 75-211 (216)
108 1wa3_A 2-keto-3-deoxy-6-phosph 74.1 18 0.00063 33.6 10.2 99 290-424 29-131 (205)
109 1yxy_A Putative N-acetylmannos 74.1 32 0.0011 32.7 12.1 127 285-442 90-230 (234)
110 2wqp_A Polysialic acid capsule 74.0 47 0.0016 34.6 14.1 119 286-434 38-188 (349)
111 1xi3_A Thiamine phosphate pyro 73.4 54 0.0018 30.3 13.3 131 289-445 79-211 (215)
112 2v82_A 2-dehydro-3-deoxy-6-pho 73.4 32 0.0011 32.1 11.8 129 286-448 70-204 (212)
113 3vnd_A TSA, tryptophan synthas 72.7 10 0.00035 38.1 8.4 90 286-387 35-152 (267)
114 1p1x_A Deoxyribose-phosphate a 72.1 26 0.00088 35.1 11.1 149 279-447 23-193 (260)
115 3b4u_A Dihydrodipicolinate syn 71.5 28 0.00097 34.9 11.5 100 286-389 27-139 (294)
116 2cu0_A Inosine-5'-monophosphat 71.5 47 0.0016 35.6 13.9 119 286-425 230-358 (486)
117 1vcv_A Probable deoxyribose-ph 71.2 3.5 0.00012 40.6 4.5 140 279-447 12-181 (226)
118 2wkj_A N-acetylneuraminate lya 70.4 29 0.00098 35.1 11.3 98 287-389 36-144 (303)
119 3tsm_A IGPS, indole-3-glycerol 70.4 39 0.0013 33.9 12.1 126 286-440 132-265 (272)
120 1thf_D HISF protein; thermophI 70.0 15 0.00052 35.3 8.8 68 285-359 31-107 (253)
121 3g8r_A Probable spore coat pol 69.8 18 0.00063 37.8 9.8 93 309-428 78-172 (350)
122 3fkr_A L-2-keto-3-deoxyarabona 69.5 15 0.0005 37.5 8.9 99 287-389 33-143 (309)
123 3daq_A DHDPS, dihydrodipicolin 69.5 25 0.00087 35.2 10.6 98 287-389 27-134 (292)
124 1at0_A 17-hedgehog; developmen 69.1 18 0.00061 32.7 8.5 63 186-256 58-134 (145)
125 3zwt_A Dihydroorotate dehydrog 68.7 28 0.00096 36.3 11.0 153 282-452 159-350 (367)
126 3glc_A Aldolase LSRF; TIM barr 68.6 11 0.00036 38.5 7.6 157 337-520 70-231 (295)
127 3f4w_A Putative hexulose 6 pho 68.2 34 0.0012 31.9 10.6 108 292-424 21-134 (211)
128 1p0k_A Isopentenyl-diphosphate 67.8 30 0.001 35.3 10.9 31 383-425 251-281 (349)
129 2e6f_A Dihydroorotate dehydrog 67.8 21 0.0007 35.8 9.5 144 289-452 112-296 (314)
130 2k8i_A SLYD, peptidyl-prolyl C 67.3 21 0.00073 33.3 8.8 76 187-265 51-133 (171)
131 3vav_A 3-methyl-2-oxobutanoate 66.9 68 0.0023 32.4 13.0 96 279-389 32-148 (275)
132 4fxs_A Inosine-5'-monophosphat 66.9 9 0.00031 41.7 7.0 51 106-156 219-269 (496)
133 3i65_A Dihydroorotate dehydrog 66.9 43 0.0015 35.7 12.1 145 291-452 206-397 (415)
134 3qze_A DHDPS, dihydrodipicolin 66.8 21 0.00072 36.4 9.4 98 287-389 48-155 (314)
135 3qja_A IGPS, indole-3-glycerol 66.7 22 0.00075 35.6 9.4 108 285-425 73-190 (272)
136 1vyr_A Pentaerythritol tetrani 66.6 53 0.0018 34.0 12.6 123 281-424 151-323 (364)
137 3vnd_A TSA, tryptophan synthas 66.5 20 0.00067 36.0 8.9 118 287-424 114-235 (267)
138 2ztj_A Homocitrate synthase; ( 66.4 1.3E+02 0.0044 31.3 17.1 163 266-446 12-185 (382)
139 2ehh_A DHDPS, dihydrodipicolin 66.3 33 0.0011 34.4 10.7 98 287-389 25-132 (294)
140 2yxg_A DHDPS, dihydrodipicolin 66.2 35 0.0012 34.2 10.8 98 287-389 25-132 (289)
141 1h5y_A HISF; histidine biosynt 66.0 38 0.0013 31.9 10.6 119 285-425 88-228 (253)
142 2r8w_A AGR_C_1641P; APC7498, d 65.8 33 0.0011 35.2 10.7 98 287-389 59-166 (332)
143 1wa3_A 2-keto-3-deoxy-6-phosph 65.7 49 0.0017 30.6 11.2 124 285-444 72-200 (205)
144 1w8s_A FBP aldolase, fructose- 65.7 8.3 0.00028 38.3 6.0 68 289-361 165-237 (263)
145 1vzw_A Phosphoribosyl isomeras 65.5 9.7 0.00033 36.6 6.3 128 285-432 33-174 (244)
146 1f6k_A N-acetylneuraminate lya 65.1 49 0.0017 33.1 11.7 98 287-389 28-136 (293)
147 2gou_A Oxidoreductase, FMN-bin 65.0 40 0.0014 35.0 11.3 119 281-424 151-322 (365)
148 1xky_A Dihydrodipicolinate syn 65.0 29 0.001 35.0 10.0 98 287-389 37-144 (301)
149 1vs1_A 3-deoxy-7-phosphoheptul 64.9 83 0.0029 31.5 13.3 106 308-439 88-196 (276)
150 3o63_A Probable thiamine-phosp 64.8 42 0.0014 32.9 10.9 126 290-445 106-240 (243)
151 3l6b_A Serine racemase; pyrido 64.8 58 0.002 33.3 12.4 120 373-522 89-213 (346)
152 2v82_A 2-dehydro-3-deoxy-6-pho 64.3 47 0.0016 31.0 10.8 101 289-423 25-127 (212)
153 4e38_A Keto-hydroxyglutarate-a 64.2 36 0.0012 33.5 10.1 100 290-423 53-153 (232)
154 3nav_A Tryptophan synthase alp 64.2 28 0.00096 34.9 9.6 118 287-424 116-237 (271)
155 3m5v_A DHDPS, dihydrodipicolin 63.9 25 0.00086 35.5 9.3 98 287-389 32-140 (301)
156 3s5o_A 4-hydroxy-2-oxoglutarat 63.6 27 0.00091 35.4 9.4 98 288-389 40-148 (307)
157 1yad_A Regulatory protein TENI 63.4 89 0.0031 29.3 12.7 106 285-425 31-138 (221)
158 3hgj_A Chromate reductase; TIM 63.1 42 0.0014 34.5 11.0 132 280-424 141-318 (349)
159 3cpr_A Dihydrodipicolinate syn 62.9 47 0.0016 33.5 11.1 98 287-389 41-148 (304)
160 4fo4_A Inosine 5'-monophosphat 62.3 14 0.00047 38.8 7.1 48 108-155 98-145 (366)
161 2r14_A Morphinone reductase; H 62.1 59 0.002 33.9 12.0 125 280-424 155-328 (377)
162 2rfg_A Dihydrodipicolinate syn 62.0 30 0.001 34.8 9.5 98 287-389 25-132 (297)
163 2y88_A Phosphoribosyl isomeras 61.7 32 0.0011 32.7 9.2 119 285-425 85-226 (244)
164 3l21_A DHDPS, dihydrodipicolin 61.6 25 0.00086 35.6 8.8 98 287-389 40-147 (304)
165 1o5k_A DHDPS, dihydrodipicolin 61.5 32 0.0011 34.8 9.5 98 287-389 37-144 (306)
166 3m47_A Orotidine 5'-phosphate 61.4 48 0.0016 32.1 10.4 129 288-444 83-222 (228)
167 3ctl_A D-allulose-6-phosphate 61.3 68 0.0023 31.2 11.5 129 288-445 18-159 (231)
168 2v9d_A YAGE; dihydrodipicolini 60.8 25 0.00084 36.4 8.7 98 287-389 56-163 (343)
169 1vzw_A Phosphoribosyl isomeras 60.5 40 0.0014 32.2 9.7 132 285-439 86-238 (244)
170 3usb_A Inosine-5'-monophosphat 60.5 12 0.00039 41.0 6.4 51 105-155 243-293 (511)
171 2czd_A Orotidine 5'-phosphate 60.5 34 0.0012 32.2 9.0 127 286-443 68-204 (208)
172 2kfw_A FKBP-type peptidyl-prol 60.2 11 0.00036 36.3 5.4 62 186-247 50-118 (196)
173 2nli_A Lactate oxidase; flavoe 60.2 12 0.00041 39.1 6.3 62 286-356 240-314 (368)
174 2h6r_A Triosephosphate isomera 60.0 30 0.001 33.2 8.6 131 289-440 75-215 (219)
175 1eep_A Inosine 5'-monophosphat 59.6 12 0.00041 39.3 6.2 51 106-156 141-191 (404)
176 1ve1_A O-acetylserine sulfhydr 59.5 55 0.0019 32.5 10.8 122 374-523 76-204 (304)
177 1rd5_A Tryptophan synthase alp 59.4 1E+02 0.0034 29.9 12.5 92 285-389 34-149 (262)
178 3dwg_A Cysteine synthase B; su 59.2 30 0.001 35.0 9.0 126 371-522 84-214 (325)
179 2gn0_A Threonine dehydratase c 58.9 74 0.0025 32.3 11.9 119 373-521 101-224 (342)
180 3flu_A DHDPS, dihydrodipicolin 58.8 28 0.00095 35.0 8.5 98 287-389 32-139 (297)
181 3si9_A DHDPS, dihydrodipicolin 58.6 26 0.00088 35.8 8.3 98 287-389 47-154 (315)
182 3e96_A Dihydrodipicolinate syn 58.5 36 0.0012 34.6 9.4 98 287-389 37-143 (316)
183 3khj_A Inosine-5-monophosphate 58.4 14 0.00049 38.5 6.4 46 108-155 97-142 (361)
184 3inp_A D-ribulose-phosphate 3- 58.3 51 0.0017 32.6 10.1 129 287-444 44-186 (246)
185 3tak_A DHDPS, dihydrodipicolin 58.1 47 0.0016 33.2 10.1 98 287-389 26-133 (291)
186 1tv5_A Dhodehase, dihydroorota 58.0 46 0.0016 35.7 10.5 107 326-452 296-425 (443)
187 2w6r_A Imidazole glycerol phos 57.9 57 0.0019 31.5 10.4 130 284-433 84-238 (266)
188 3ngj_A Deoxyribose-phosphate a 57.8 96 0.0033 30.6 11.9 144 279-444 38-197 (239)
189 2vc6_A MOSA, dihydrodipicolina 57.5 39 0.0013 33.8 9.3 97 287-388 25-131 (292)
190 3l5l_A Xenobiotic reductase A; 57.1 67 0.0023 33.2 11.3 130 280-424 147-325 (363)
191 1kbi_A Cytochrome B2, L-LCR; f 56.8 26 0.00088 38.3 8.4 95 307-425 331-433 (511)
192 3glc_A Aldolase LSRF; TIM barr 56.7 1.5E+02 0.005 30.1 13.4 133 288-446 130-279 (295)
193 1tdj_A Biosynthetic threonine 56.4 1.1E+02 0.0036 33.6 13.1 118 374-521 93-215 (514)
194 4dt4_A FKBP-type 16 kDa peptid 56.3 44 0.0015 31.2 8.8 61 188-248 75-143 (169)
195 1p5j_A L-serine dehydratase; l 56.2 69 0.0024 33.1 11.2 120 374-522 107-233 (372)
196 3ovp_A Ribulose-phosphate 3-ep 56.2 1.2E+02 0.0042 29.1 12.4 118 287-431 21-149 (228)
197 2ojp_A DHDPS, dihydrodipicolin 56.2 30 0.001 34.7 8.2 98 287-389 26-133 (292)
198 3dz1_A Dihydrodipicolinate syn 56.0 67 0.0023 32.5 10.9 96 287-389 33-140 (313)
199 3cgm_A SLYD, peptidyl-prolyl C 56.0 45 0.0016 30.6 8.8 61 187-247 46-114 (158)
200 3rcm_A TATD family hydrolase; 55.8 54 0.0018 32.8 10.0 104 284-391 17-135 (287)
201 1ub3_A Aldolase protein; schif 55.7 11 0.00036 36.9 4.6 144 279-444 14-173 (220)
202 2ekc_A AQ_1548, tryptophan syn 55.4 45 0.0015 32.8 9.2 118 286-424 112-234 (262)
203 2y88_A Phosphoribosyl isomeras 55.2 20 0.0007 34.2 6.5 124 289-432 37-177 (244)
204 3igs_A N-acetylmannosamine-6-p 55.1 74 0.0025 30.8 10.6 111 282-423 34-155 (232)
205 3iwp_A Copper homeostasis prot 54.8 1.4E+02 0.0046 30.4 12.7 142 283-448 46-207 (287)
206 1jcn_A Inosine monophosphate d 54.7 15 0.00051 39.8 6.1 51 106-156 243-293 (514)
207 1qop_A Tryptophan synthase alp 53.9 37 0.0013 33.4 8.4 118 286-424 112-234 (268)
208 3q58_A N-acetylmannosamine-6-p 53.9 64 0.0022 31.2 9.9 110 282-422 34-154 (229)
209 1h5y_A HISF; histidine biosynt 53.9 28 0.00096 32.9 7.2 84 286-386 157-251 (253)
210 4avf_A Inosine-5'-monophosphat 53.8 19 0.00066 39.0 6.7 51 106-156 217-267 (490)
211 3oa3_A Aldolase; structural ge 53.8 89 0.003 31.7 11.2 143 279-445 69-229 (288)
212 1kbi_A Cytochrome B2, L-LCR; f 53.8 19 0.00064 39.4 6.6 67 286-356 354-433 (511)
213 2kr7_A FKBP-type peptidyl-prol 53.7 51 0.0017 29.9 8.6 63 187-249 56-125 (151)
214 1y0e_A Putative N-acetylmannos 53.6 1.4E+02 0.0049 27.7 14.5 105 290-424 30-146 (223)
215 1tvn_A Cellulase, endoglucanas 53.5 23 0.0008 34.7 6.8 54 117-172 38-101 (293)
216 1mzh_A Deoxyribose-phosphate a 53.2 1.2E+02 0.0042 28.9 11.8 144 279-442 15-170 (225)
217 3tbh_A O-acetyl serine sulfhyd 52.7 42 0.0014 34.2 8.8 126 371-522 83-214 (334)
218 2fli_A Ribulose-phosphate 3-ep 52.7 1.1E+02 0.0038 28.3 11.2 109 286-423 19-137 (220)
219 3pc3_A CG1753, isoform A; CBS, 52.6 55 0.0019 35.4 10.1 128 373-523 126-259 (527)
220 3hgm_A Universal stress protei 52.2 17 0.00058 31.0 4.9 40 478-518 99-147 (147)
221 1dxe_A 2-dehydro-3-deoxy-galac 52.2 78 0.0027 31.0 10.3 69 285-355 29-98 (256)
222 2nzl_A Hydroxyacid oxidase 1; 52.1 21 0.00073 37.6 6.5 62 286-356 263-337 (392)
223 4ef8_A Dihydroorotate dehydrog 51.8 44 0.0015 34.7 8.9 139 294-453 153-330 (354)
224 3d0c_A Dihydrodipicolinate syn 51.8 47 0.0016 33.7 8.9 98 287-389 37-143 (314)
225 3qfe_A Putative dihydrodipicol 51.7 52 0.0018 33.5 9.2 99 287-389 36-145 (318)
226 3ndz_A Endoglucanase D; cellot 51.3 32 0.0011 35.1 7.6 58 114-173 39-106 (345)
227 3b0p_A TRNA-dihydrouridine syn 50.8 1E+02 0.0034 31.7 11.3 121 287-424 74-225 (350)
228 3exr_A RMPD (hexulose-6-phosph 50.8 1.3E+02 0.0044 28.8 11.4 138 292-444 78-216 (221)
229 1ve5_A Threonine deaminase; ri 50.6 75 0.0026 31.6 10.1 119 374-522 79-206 (311)
230 3kts_A Glycerol uptake operon 50.6 8.7 0.0003 36.9 3.0 126 284-426 17-181 (192)
231 3na8_A Putative dihydrodipicol 50.4 41 0.0014 34.2 8.2 98 287-389 49-156 (315)
232 2zbt_A Pyridoxal biosynthesis 50.4 44 0.0015 33.2 8.3 125 286-445 31-172 (297)
233 1v71_A Serine racemase, hypoth 49.8 80 0.0027 31.7 10.2 120 373-522 87-211 (323)
234 3a5f_A Dihydrodipicolinate syn 49.8 31 0.0011 34.6 7.1 98 287-389 26-133 (291)
235 3icg_A Endoglucanase D; cellul 49.8 32 0.0011 37.1 7.7 54 118-173 46-109 (515)
236 3cqj_A L-ribulose-5-phosphate 49.8 64 0.0022 31.2 9.3 120 286-414 33-186 (295)
237 4h27_A L-serine dehydratase/L- 49.7 70 0.0024 32.9 10.0 120 373-521 106-232 (364)
238 3kru_A NADH:flavin oxidoreduct 49.6 64 0.0022 33.3 9.6 131 280-424 132-307 (343)
239 1y7l_A O-acetylserine sulfhydr 49.6 1.1E+02 0.0038 30.5 11.2 125 374-523 76-207 (316)
240 1mdl_A Mandelate racemase; iso 49.6 36 0.0012 34.7 7.7 61 106-171 133-197 (359)
241 1egz_A Endoglucanase Z, EGZ, C 49.4 23 0.00078 34.7 5.9 52 118-171 39-98 (291)
242 1tqj_A Ribulose-phosphate 3-ep 49.3 66 0.0022 31.0 9.1 142 279-447 9-167 (230)
243 1x1o_A Nicotinate-nucleotide p 49.2 30 0.001 35.1 6.8 65 284-356 204-269 (286)
244 3noy_A 4-hydroxy-3-methylbut-2 49.1 2.2E+02 0.0076 29.8 13.4 138 287-446 50-202 (366)
245 1vr6_A Phospho-2-dehydro-3-deo 49.0 1.6E+02 0.0053 30.7 12.4 90 308-423 156-246 (350)
246 2v5j_A 2,4-dihydroxyhept-2-ENE 48.8 79 0.0027 31.7 9.9 69 285-355 49-118 (287)
247 1o66_A 3-methyl-2-oxobutanoate 48.8 1.6E+02 0.0054 29.7 12.0 131 280-425 21-182 (275)
248 2r91_A 2-keto-3-deoxy-(6-phosp 48.6 1.2E+02 0.004 30.2 11.1 97 286-389 22-128 (286)
249 1gox_A (S)-2-hydroxy-acid oxid 48.5 20 0.0007 37.2 5.7 62 286-356 236-310 (370)
250 3tha_A Tryptophan synthase alp 48.4 57 0.0019 32.4 8.6 116 288-424 108-227 (252)
251 3tfx_A Orotidine 5'-phosphate 48.2 1.1E+02 0.0037 30.5 10.7 137 290-449 77-241 (259)
252 2htm_A Thiazole biosynthesis p 48.0 1.1E+02 0.0036 30.9 10.5 84 349-447 146-230 (268)
253 1z41_A YQJM, probable NADH-dep 48.0 90 0.0031 31.7 10.4 127 281-424 134-307 (338)
254 1z7w_A Cysteine synthase; tran 48.0 91 0.0031 31.2 10.3 125 373-523 80-210 (322)
255 3oix_A Putative dihydroorotate 48.0 76 0.0026 32.8 9.8 150 284-453 141-328 (345)
256 2z08_A Universal stress protei 47.7 27 0.00092 29.6 5.5 40 478-518 88-136 (137)
257 1vhk_A Hypothetical protein YQ 47.6 68 0.0023 31.9 9.1 119 221-355 37-175 (268)
258 3zwt_A Dihydroorotate dehydrog 47.4 14 0.00046 38.8 4.1 94 280-383 230-353 (367)
259 4adt_A Pyridoxine biosynthetic 47.4 81 0.0028 32.0 9.8 124 287-447 32-174 (297)
260 3nav_A Tryptophan synthase alp 47.0 83 0.0028 31.5 9.7 90 286-387 37-154 (271)
261 1xm3_A Thiazole biosynthesis p 46.4 1.3E+02 0.0043 29.6 10.9 57 381-449 176-232 (264)
262 1f76_A Dihydroorotate dehydrog 46.4 12 0.0004 38.2 3.3 71 281-359 222-322 (336)
263 2nuw_A 2-keto-3-deoxygluconate 46.2 1.1E+02 0.0038 30.5 10.5 96 287-389 24-129 (288)
264 3eb2_A Putative dihydrodipicol 45.9 36 0.0012 34.3 6.9 98 287-389 29-136 (300)
265 2pqm_A Cysteine synthase; OASS 45.8 79 0.0027 32.2 9.5 124 374-523 92-221 (343)
266 1ko7_A HPR kinase/phosphatase; 45.8 20 0.00069 36.8 5.0 85 326-431 49-157 (314)
267 2rkb_A Serine dehydratase-like 45.6 1.5E+02 0.005 29.6 11.4 119 374-522 68-193 (318)
268 2qr6_A IMP dehydrogenase/GMP r 45.3 35 0.0012 35.5 6.9 75 285-363 221-314 (393)
269 3lab_A Putative KDPG (2-keto-3 45.1 60 0.0021 31.6 8.0 101 290-424 32-139 (217)
270 3sgz_A Hydroxyacid oxidase 2; 45.0 32 0.0011 35.9 6.4 63 286-357 228-303 (352)
271 1mjh_A Protein (ATP-binding do 45.0 31 0.0011 30.1 5.6 43 478-521 109-160 (162)
272 3l55_A B-1,4-endoglucanase/cel 45.0 38 0.0013 34.9 7.0 57 114-172 49-113 (353)
273 3tnj_A Universal stress protei 44.9 26 0.00088 30.1 5.0 43 478-521 98-148 (150)
274 2gjl_A Hypothetical protein PA 44.8 2.5E+02 0.0086 28.0 15.0 116 285-427 28-148 (328)
275 3h5d_A DHDPS, dihydrodipicolin 44.5 56 0.0019 33.2 8.1 99 286-389 31-140 (311)
276 4aec_A Cysteine synthase, mito 44.1 72 0.0025 34.0 9.2 124 373-522 188-317 (430)
277 3ddy_A Lumazine protein, LUMP; 44.0 72 0.0025 30.3 8.2 54 209-265 23-84 (186)
278 1w3i_A EDA, 2-keto-3-deoxy glu 43.9 1.3E+02 0.0044 30.1 10.6 97 286-389 23-129 (293)
279 2ovl_A Putative racemase; stru 43.8 37 0.0013 34.9 6.8 63 106-171 133-199 (371)
280 3sgz_A Hydroxyacid oxidase 2; 43.7 57 0.0019 34.0 8.1 31 383-425 272-302 (352)
281 3r12_A Deoxyribose-phosphate a 43.6 31 0.0011 34.6 5.9 146 279-444 54-213 (260)
282 1qpo_A Quinolinate acid phosph 43.6 34 0.0011 34.6 6.2 64 286-356 204-270 (284)
283 3gr7_A NADPH dehydrogenase; fl 43.6 1.7E+02 0.0058 29.9 11.7 128 280-424 133-307 (340)
284 3i65_A Dihydroorotate dehydrog 43.5 24 0.00084 37.6 5.4 97 279-384 278-401 (415)
285 2vef_A Dihydropteroate synthas 43.3 64 0.0022 33.0 8.3 68 105-174 8-96 (314)
286 1edg_A Endoglucanase A; family 43.2 47 0.0016 34.0 7.4 55 117-173 61-124 (380)
287 1yxy_A Putative N-acetylmannos 42.9 1.8E+02 0.0061 27.4 11.1 109 285-425 37-163 (234)
288 1nsj_A PRAI, phosphoribosyl an 42.8 1.5E+02 0.0051 28.2 10.4 69 284-355 10-83 (205)
289 1ub3_A Aldolase protein; schif 42.8 89 0.003 30.2 8.9 102 383-501 52-156 (220)
290 2nli_A Lactate oxidase; flavoe 42.8 46 0.0016 34.6 7.3 95 307-425 217-314 (368)
291 3m5v_A DHDPS, dihydrodipicolin 42.8 88 0.003 31.4 9.2 91 349-448 42-134 (301)
292 1wv2_A Thiazole moeity, thiazo 42.8 2.7E+02 0.0093 27.9 15.4 131 295-447 101-239 (265)
293 1geq_A Tryptophan synthase alp 42.7 2.2E+02 0.0077 26.9 12.8 98 326-445 80-188 (248)
294 4af0_A Inosine-5'-monophosphat 42.3 23 0.00079 39.2 5.0 50 107-156 270-319 (556)
295 2hmc_A AGR_L_411P, dihydrodipi 42.3 86 0.0029 32.3 9.2 96 287-389 51-157 (344)
296 2xio_A Putative deoxyribonucle 42.2 64 0.0022 31.9 8.0 102 285-390 28-147 (301)
297 1jbq_A B, cystathionine beta-s 42.1 75 0.0026 33.8 9.0 127 374-523 175-307 (435)
298 1rvk_A Isomerase/lactonizing e 42.1 56 0.0019 33.6 7.8 47 122-171 156-208 (382)
299 1rd5_A Tryptophan synthase alp 42.0 1.4E+02 0.0046 28.9 10.2 114 292-424 114-230 (262)
300 2o55_A Putative glycerophospho 42.0 24 0.00081 34.3 4.7 58 372-445 201-258 (258)
301 2d73_A Alpha-glucosidase SUSB; 42.0 80 0.0027 36.2 9.5 103 282-389 370-507 (738)
302 1m3u_A 3-methyl-2-oxobutanoate 42.0 1.9E+02 0.0066 28.9 11.3 128 281-423 22-180 (264)
303 3pfn_A NAD kinase; structural 41.5 11 0.00039 39.5 2.4 36 486-521 243-282 (365)
304 3s3t_A Nucleotide-binding prot 41.3 36 0.0012 29.0 5.3 40 478-518 96-145 (146)
305 2q3b_A Cysteine synthase A; py 41.3 1.4E+02 0.0048 29.6 10.5 123 374-523 81-210 (313)
306 3gka_A N-ethylmaleimide reduct 41.3 3.2E+02 0.011 28.2 14.0 114 280-424 150-316 (361)
307 1vc4_A Indole-3-glycerol phosp 41.0 2.6E+02 0.0091 27.2 12.5 131 286-440 118-252 (254)
308 2v03_A Cysteine synthase B; py 41.0 91 0.0031 30.9 9.0 123 374-523 75-203 (303)
309 1vli_A Spore coat polysacchari 40.9 51 0.0017 34.9 7.2 56 349-424 135-192 (385)
310 1ujp_A Tryptophan synthase alp 40.7 70 0.0024 31.8 8.0 118 287-424 110-229 (271)
311 3fdx_A Putative filament prote 40.7 38 0.0013 28.7 5.3 41 477-518 94-142 (143)
312 1nu5_A Chloromuconate cycloiso 40.6 50 0.0017 33.8 7.2 47 122-171 149-196 (370)
313 3ayr_A Endoglucanase; TIM barr 40.6 60 0.0021 33.2 7.7 53 118-172 63-125 (376)
314 1zzm_A Putative deoxyribonucle 40.5 1.2E+02 0.004 28.8 9.4 100 287-391 23-135 (259)
315 2egu_A Cysteine synthase; O-ac 40.4 70 0.0024 31.8 8.0 124 373-523 78-207 (308)
316 3fok_A Uncharacterized protein 40.3 2.7E+02 0.0093 28.5 12.3 140 409-556 133-295 (307)
317 3stp_A Galactonate dehydratase 40.3 46 0.0016 35.1 6.9 65 106-171 167-238 (412)
318 1aj0_A DHPS, dihydropteroate s 40.3 78 0.0027 31.8 8.3 69 105-175 13-102 (282)
319 1tkk_A Similar to chloromucona 40.2 58 0.002 33.3 7.5 47 122-171 147-193 (366)
320 1vrd_A Inosine-5'-monophosphat 40.1 35 0.0012 36.6 6.0 49 108-156 227-275 (494)
321 2gdq_A YITF; mandelate racemas 40.1 85 0.0029 32.4 8.9 47 122-171 146-192 (382)
322 2kct_A Cytochrome C-type bioge 39.9 69 0.0023 27.2 6.6 57 171-229 7-65 (94)
323 2oog_A Glycerophosphoryl diest 39.9 97 0.0033 30.5 8.9 103 298-440 172-278 (287)
324 2yr1_A 3-dehydroquinate dehydr 39.8 1.6E+02 0.0054 29.0 10.4 120 288-424 37-176 (257)
325 1j0a_A 1-aminocyclopropane-1-c 39.5 66 0.0023 32.3 7.7 127 373-522 85-218 (325)
326 1tq8_A Hypothetical protein RV 39.4 41 0.0014 29.9 5.5 43 478-521 108-159 (163)
327 3iau_A Threonine deaminase; py 39.3 2.3E+02 0.0078 29.0 11.9 121 373-523 121-246 (366)
328 3ngj_A Deoxyribose-phosphate a 39.2 1.5E+02 0.0052 29.2 10.0 88 399-501 90-180 (239)
329 1o58_A O-acetylserine sulfhydr 39.0 83 0.0028 31.3 8.3 123 374-523 79-208 (303)
330 2dum_A Hypothetical protein PH 38.8 43 0.0015 29.5 5.5 44 478-522 106-158 (170)
331 1vcf_A Isopentenyl-diphosphate 38.6 49 0.0017 33.5 6.6 58 383-452 256-315 (332)
332 2nzl_A Hydroxyacid oxidase 1; 38.6 38 0.0013 35.7 5.9 31 383-425 307-337 (392)
333 3ks6_A Glycerophosphoryl diest 38.5 58 0.002 31.5 6.9 105 298-443 134-244 (250)
334 3bo9_A Putative nitroalkan dio 38.3 3.2E+02 0.011 27.4 15.4 111 285-425 39-152 (326)
335 1tzz_A Hypothetical protein L1 38.2 60 0.0021 33.6 7.4 63 106-171 150-218 (392)
336 3kws_A Putative sugar isomeras 38.1 2.2E+02 0.0076 27.1 11.1 122 287-414 42-188 (287)
337 1viz_A PCRB protein homolog; s 38.1 32 0.0011 33.9 4.9 49 106-154 7-58 (240)
338 3ih1_A Methylisocitrate lyase; 37.9 2.6E+02 0.0088 28.4 11.8 112 289-424 110-243 (305)
339 3ffs_A Inosine-5-monophosphate 37.9 28 0.00096 36.9 4.7 43 111-155 139-181 (400)
340 1h1n_A Endo type cellulase ENG 37.8 26 0.00089 34.8 4.3 52 119-172 33-94 (305)
341 1q77_A Hypothetical protein AQ 37.8 33 0.0011 29.0 4.5 40 478-518 98-137 (138)
342 2uva_G Fatty acid synthase bet 37.7 1.1E+02 0.0038 39.1 10.7 119 286-423 656-794 (2060)
343 3loq_A Universal stress protei 37.5 93 0.0032 30.0 8.2 69 484-559 118-197 (294)
344 3eod_A Protein HNR; response r 37.4 66 0.0023 26.3 6.2 76 480-556 42-123 (130)
345 3ipw_A Hydrolase TATD family p 37.2 73 0.0025 32.6 7.6 107 283-390 51-175 (325)
346 3o1n_A 3-dehydroquinate dehydr 36.9 1.6E+02 0.0056 29.3 10.0 141 285-445 121-274 (276)
347 1kzl_A Riboflavin synthase; bi 36.6 55 0.0019 31.7 6.2 55 210-266 25-86 (208)
348 3h5i_A Response regulator/sens 36.6 1.1E+02 0.0039 25.4 7.7 75 482-557 42-126 (140)
349 3qz6_A HPCH/HPAI aldolase; str 36.5 1.3E+02 0.0045 29.6 9.1 65 288-354 29-94 (261)
350 3vab_A Diaminopimelate decarbo 36.4 74 0.0025 33.7 7.8 73 85-170 97-172 (443)
351 3sr7_A Isopentenyl-diphosphate 36.3 25 0.00087 36.8 4.0 60 378-451 271-337 (365)
352 1o4u_A Type II quinolic acid p 36.3 28 0.00095 35.3 4.2 65 285-356 202-269 (285)
353 1ep3_A Dihydroorotate dehydrog 36.2 49 0.0017 32.7 6.1 53 326-384 241-296 (311)
354 1jmv_A USPA, universal stress 36.0 52 0.0018 27.7 5.5 43 478-521 91-139 (141)
355 3pr9_A FKBP-type peptidyl-prol 35.8 71 0.0024 29.3 6.6 61 186-248 62-128 (157)
356 3nco_A Endoglucanase fncel5A; 35.7 67 0.0023 31.8 7.0 53 118-172 42-104 (320)
357 3h43_A Proteasome-activating n 35.7 1.3E+02 0.0046 24.7 7.7 59 169-238 13-74 (85)
358 4h3d_A 3-dehydroquinate dehydr 35.7 2.5E+02 0.0087 27.5 11.1 135 271-424 19-176 (258)
359 2f6u_A GGGPS, (S)-3-O-geranylg 35.5 42 0.0014 33.0 5.2 49 106-154 7-58 (234)
360 1eye_A DHPS 1, dihydropteroate 35.4 63 0.0021 32.5 6.7 68 105-175 4-92 (280)
361 1i8d_A Riboflavin synthase; ri 35.4 77 0.0026 30.8 7.0 49 216-266 31-86 (213)
362 3mt0_A Uncharacterized protein 34.9 1.7E+02 0.0058 28.1 9.7 73 479-560 79-169 (290)
363 3olq_A Universal stress protei 34.9 1E+02 0.0034 30.0 8.0 73 478-559 100-190 (319)
364 2oz8_A MLL7089 protein; struct 34.7 51 0.0018 34.2 6.1 63 106-171 132-198 (389)
365 2qdd_A Mandelate racemase/muco 34.6 66 0.0023 33.1 6.9 62 105-171 133-198 (378)
366 1zcc_A Glycerophosphodiester p 34.3 85 0.0029 30.2 7.3 56 368-443 178-235 (248)
367 4dbe_A Orotidine 5'-phosphate 34.3 38 0.0013 32.8 4.7 84 286-377 125-209 (222)
368 2cks_A Endoglucanase E-5; carb 34.1 63 0.0022 31.9 6.5 52 119-172 44-102 (306)
369 3qvq_A Phosphodiesterase OLEI0 34.1 59 0.002 31.5 6.1 50 372-441 199-248 (252)
370 2nx9_A Oxaloacetate decarboxyl 33.9 4.1E+02 0.014 28.5 13.2 152 280-447 26-200 (464)
371 1ix5_A FKBP; ppiase, isomerase 33.9 38 0.0013 30.8 4.4 60 187-248 64-129 (151)
372 3cwc_A Putative glycerate kina 33.8 90 0.0031 33.0 7.8 61 327-390 266-326 (383)
373 1icp_A OPR1, 12-oxophytodienoa 33.6 1.7E+02 0.0058 30.4 9.9 122 281-424 157-330 (376)
374 4ab4_A Xenobiotic reductase B; 33.6 3.8E+02 0.013 27.6 12.5 114 281-424 143-308 (362)
375 1to3_A Putative aldolase YIHT; 33.5 3.8E+02 0.013 26.9 12.2 146 288-449 113-291 (304)
376 3tsm_A IGPS, indole-3-glycerol 33.3 2.6E+02 0.0088 27.9 10.7 108 285-425 80-197 (272)
377 2gm3_A Unknown protein; AT3G01 33.2 52 0.0018 29.1 5.2 44 478-522 113-165 (175)
378 3flu_A DHDPS, dihydrodipicolin 33.2 2.1E+02 0.0073 28.4 10.3 90 349-448 42-133 (297)
379 4dpp_A DHDPS 2, dihydrodipicol 33.2 97 0.0033 32.3 7.9 96 287-389 84-189 (360)
380 1p4c_A L(+)-mandelate dehydrog 33.1 1E+02 0.0035 32.0 8.1 33 381-425 276-308 (380)
381 3fg9_A Protein of universal st 33.0 40 0.0014 29.2 4.3 40 478-518 107-155 (156)
382 2ftp_A Hydroxymethylglutaryl-C 32.9 3E+02 0.01 27.3 11.3 111 407-521 86-212 (302)
383 1vhy_A Hypothetical protein HI 32.9 1E+02 0.0036 30.3 7.8 70 221-301 36-110 (257)
384 3cg4_A Response regulator rece 32.9 1.6E+02 0.0056 24.1 8.1 76 481-557 43-129 (142)
385 4d9i_A Diaminopropionate ammon 32.7 1.1E+02 0.0036 31.9 8.2 122 373-521 125-261 (398)
386 4e8b_A Ribosomal RNA small sub 32.5 86 0.0029 30.8 7.0 71 221-302 34-109 (251)
387 3nhm_A Response regulator; pro 32.3 2E+02 0.0068 23.2 9.2 76 481-557 39-121 (133)
388 3vkj_A Isopentenyl-diphosphate 32.2 1.1E+02 0.0037 31.9 8.1 57 383-451 267-325 (368)
389 2z6i_A Trans-2-enoyl-ACP reduc 32.2 3.4E+02 0.012 27.2 11.7 110 285-425 25-138 (332)
390 3gg7_A Uncharacterized metallo 32.2 66 0.0022 31.7 6.1 95 285-390 15-125 (254)
391 4dwd_A Mandelate racemase/muco 32.1 1.8E+02 0.006 30.3 9.8 63 106-171 125-199 (393)
392 2yci_X 5-methyltetrahydrofolat 32.1 74 0.0025 31.7 6.5 52 120-173 37-88 (271)
393 1oy0_A Ketopantoate hydroxymet 31.9 3.4E+02 0.012 27.3 11.4 128 281-423 39-198 (281)
394 3idf_A USP-like protein; unive 31.8 43 0.0015 28.2 4.2 37 479-518 93-137 (138)
395 1ka9_F Imidazole glycerol phos 31.7 72 0.0024 30.4 6.2 65 288-359 36-108 (252)
396 3i42_A Response regulator rece 31.6 1.2E+02 0.0041 24.5 6.9 67 481-548 39-112 (127)
397 3vk5_A MOEO5; TIM barrel, tran 31.6 32 0.0011 35.0 3.7 69 332-423 49-122 (286)
398 1tx2_A DHPS, dihydropteroate s 31.5 1.7E+02 0.0058 29.6 9.2 67 106-174 39-126 (297)
399 4a29_A Engineered retro-aldol 31.3 62 0.0021 32.4 5.7 63 284-355 161-233 (258)
400 3qze_A DHDPS, dihydrodipicolin 31.3 2E+02 0.0068 29.0 9.8 89 349-448 58-149 (314)
401 3oa3_A Aldolase; structural ge 31.3 3.8E+02 0.013 27.1 11.6 104 400-518 122-240 (288)
402 3r2g_A Inosine 5'-monophosphat 31.3 41 0.0014 35.2 4.7 47 110-156 92-138 (361)
403 1xg4_A Probable methylisocitra 31.2 4.2E+02 0.014 26.6 12.3 116 287-424 98-235 (295)
404 2whl_A Beta-mannanase, baman5; 30.9 42 0.0014 32.9 4.5 52 119-172 33-86 (294)
405 2og9_A Mandelate racemase/muco 30.9 79 0.0027 32.8 6.8 63 106-171 148-215 (393)
406 1ceo_A Cellulase CELC; glycosy 30.8 72 0.0025 31.7 6.3 52 118-171 29-90 (343)
407 1ece_A Endocellulase E1; glyco 30.8 46 0.0016 33.4 4.9 52 120-173 47-118 (358)
408 2wkj_A N-acetylneuraminate lya 30.8 2.5E+02 0.0084 28.1 10.3 89 349-448 46-137 (303)
409 1o94_A Tmadh, trimethylamine d 30.8 1.9E+02 0.0065 32.5 10.4 131 281-424 139-321 (729)
410 3dlo_A Universal stress protei 30.7 68 0.0023 28.1 5.5 40 478-518 106-154 (155)
411 3kht_A Response regulator; PSI 30.6 2.2E+02 0.0076 23.5 8.6 79 480-558 42-131 (144)
412 3ldv_A Orotidine 5'-phosphate 30.5 46 0.0016 33.1 4.6 74 290-373 169-252 (255)
413 3dzv_A 4-methyl-5-(beta-hydrox 30.3 51 0.0018 33.0 5.0 55 327-391 42-96 (273)
414 3afo_A NADH kinase POS5; alpha 30.3 20 0.00068 37.9 2.0 35 487-521 226-264 (388)
415 3sz8_A 2-dehydro-3-deoxyphosph 30.3 2.3E+02 0.0077 28.7 9.8 108 294-427 49-171 (285)
416 2jep_A Xyloglucanase; family 5 30.2 99 0.0034 31.6 7.3 54 118-173 70-133 (395)
417 3a10_A Response regulator; pho 30.1 2E+02 0.0069 22.6 8.2 61 481-542 37-102 (116)
418 3ve9_A Orotidine-5'-phosphate 30.1 34 0.0012 33.0 3.6 80 287-375 119-200 (215)
419 2jvf_A De novo protein M7; tet 30.1 2.2E+02 0.0075 23.2 7.7 53 122-175 38-90 (96)
420 3tml_A 2-dehydro-3-deoxyphosph 30.0 2.5E+02 0.0084 28.4 10.0 109 294-428 46-175 (288)
421 2aam_A Hypothetical protein TM 29.8 1.6E+02 0.0055 29.9 8.7 96 289-389 128-246 (309)
422 3a24_A Alpha-galactosidase; gl 29.8 1.3E+02 0.0044 33.9 8.6 100 282-389 308-424 (641)
423 2gl5_A Putative dehydratase pr 29.7 1.2E+02 0.004 31.5 7.9 66 106-171 129-226 (410)
424 3fs2_A 2-dehydro-3-deoxyphosph 29.7 2.9E+02 0.0098 28.1 10.5 108 294-427 70-192 (298)
425 2wg5_A General control protein 29.6 2.5E+02 0.0084 24.1 8.7 20 219-238 73-93 (109)
426 3l12_A Putative glycerophospho 29.6 70 0.0024 32.0 6.0 51 372-442 257-307 (313)
427 3dx5_A Uncharacterized protein 29.6 2.9E+02 0.0098 26.1 10.2 33 287-319 19-58 (286)
428 1v8a_A Hydroxyethylthiazole ki 29.6 51 0.0018 32.5 4.8 49 339-392 47-95 (265)
429 1tv5_A Dhodehase, dihydroorota 29.6 61 0.0021 34.8 5.7 54 107-160 180-248 (443)
430 2qv0_A Protein MRKE; structura 29.5 1.6E+02 0.0056 24.2 7.6 78 482-560 48-132 (143)
431 3aof_A Endoglucanase; glycosyl 29.5 76 0.0026 31.1 6.1 52 119-172 35-96 (317)
432 1xky_A Dihydrodipicolinate syn 29.1 2.3E+02 0.0079 28.3 9.7 89 349-448 47-138 (301)
433 3ajx_A 3-hexulose-6-phosphate 29.0 3.3E+02 0.011 24.8 12.2 122 293-444 22-155 (207)
434 2poz_A Putative dehydratase; o 28.8 81 0.0028 32.6 6.4 50 122-171 144-207 (392)
435 2v9d_A YAGE; dihydrodipicolini 28.8 2.2E+02 0.0075 29.2 9.6 89 349-448 66-157 (343)
436 1xg4_A Probable methylisocitra 28.7 97 0.0033 31.4 6.8 65 286-357 170-237 (295)
437 3grc_A Sensor protein, kinase; 28.7 2.4E+02 0.0082 23.0 9.3 70 480-550 41-119 (140)
438 3ndo_A Deoxyribose-phosphate a 28.6 77 0.0026 31.1 5.8 147 279-444 24-187 (231)
439 2ox4_A Putative mandelate race 28.6 1.3E+02 0.0044 31.1 7.9 50 122-171 153-217 (403)
440 2ehh_A DHDPS, dihydrodipicolin 28.5 2.2E+02 0.0077 28.2 9.4 89 349-448 35-126 (294)
441 2yw3_A 4-hydroxy-2-oxoglutarat 28.3 3.7E+02 0.013 25.1 11.6 105 286-427 73-182 (207)
442 3vup_A Beta-1,4-mannanase; TIM 28.2 56 0.0019 31.2 4.7 49 120-170 45-110 (351)
443 2hqr_A Putative transcriptiona 28.0 76 0.0026 29.0 5.5 69 481-550 36-107 (223)
444 1xi3_A Thiamine phosphate pyro 27.6 1.4E+02 0.0049 27.3 7.4 47 120-168 29-75 (215)
445 1f6k_A N-acetylneuraminate lya 27.6 2.5E+02 0.0085 27.8 9.6 95 343-448 31-130 (293)
446 7a3h_A Endoglucanase; hydrolas 27.5 72 0.0025 31.6 5.6 54 117-172 43-102 (303)
447 2o56_A Putative mandelate race 27.5 1.4E+02 0.0046 31.0 7.9 50 122-171 159-223 (407)
448 3ceu_A Thiamine phosphate pyro 27.5 1E+02 0.0036 28.9 6.4 98 286-425 16-115 (210)
449 4e4u_A Mandalate racemase/muco 27.2 2.9E+02 0.01 28.8 10.5 66 106-171 124-209 (412)
450 1pii_A N-(5'phosphoribosyl)ant 27.2 1.2E+02 0.0041 32.7 7.5 107 284-421 165-279 (452)
451 2yr1_A 3-dehydroquinate dehydr 27.1 4.3E+02 0.015 25.8 11.1 144 280-444 96-252 (257)
452 3daq_A DHDPS, dihydrodipicolin 27.1 3.3E+02 0.011 27.0 10.4 89 349-448 37-128 (292)
453 4adt_A Pyridoxine biosynthetic 27.1 1.1E+02 0.0039 30.9 7.0 56 379-445 203-259 (297)
454 1qo2_A Molecule: N-((5-phospho 27.0 1.6E+02 0.0054 27.9 7.7 130 284-438 83-237 (241)
455 1grj_A GREA protein; transcrip 27.0 51 0.0017 30.3 4.0 84 152-242 61-156 (158)
456 3sjn_A Mandelate racemase/muco 26.9 1.2E+02 0.004 31.3 7.2 49 120-171 151-201 (374)
457 1xwy_A DNAse TATD, deoxyribonu 26.7 2.7E+02 0.0091 26.3 9.4 100 285-390 20-132 (264)
458 2r8w_A AGR_C_1641P; APC7498, d 26.7 2.5E+02 0.0086 28.5 9.6 89 349-448 69-160 (332)
459 3cpr_A Dihydrodipicolinate syn 26.7 2.7E+02 0.0094 27.8 9.8 89 349-448 51-142 (304)
460 2rdx_A Mandelate racemase/muco 26.7 81 0.0028 32.4 5.9 62 106-171 134-197 (379)
461 1ypf_A GMP reductase; GUAC, pu 26.6 56 0.0019 33.3 4.6 47 110-156 98-146 (336)
462 1bqc_A Protein (beta-mannanase 26.6 88 0.003 30.6 6.0 48 121-171 36-86 (302)
463 1qap_A Quinolinic acid phospho 26.4 93 0.0032 31.5 6.2 61 286-356 218-281 (296)
464 2yxg_A DHDPS, dihydrodipicolin 26.1 2.8E+02 0.0094 27.5 9.6 95 343-448 28-126 (289)
465 4d9b_A D-cysteine desulfhydras 26.0 3.2E+02 0.011 27.5 10.2 163 327-522 47-236 (342)
466 3tj4_A Mandelate racemase; eno 25.9 3.2E+02 0.011 27.9 10.3 63 106-171 137-205 (372)
467 2pp0_A L-talarate/galactarate 25.8 1.1E+02 0.0037 31.8 6.8 63 106-171 161-228 (398)
468 4g9p_A 4-hydroxy-3-methylbut-2 25.8 1.1E+02 0.0036 32.7 6.6 50 119-171 40-89 (406)
469 3lmz_A Putative sugar isomeras 25.8 4.1E+02 0.014 24.8 10.6 90 286-388 33-131 (257)
470 2osx_A Endoglycoceramidase II; 25.8 83 0.0028 33.4 6.0 52 118-171 66-126 (481)
471 1g01_A Endoglucanase; alpha/be 25.5 69 0.0024 32.6 5.1 51 119-172 55-112 (364)
472 2jpp_A Translational repressor 25.4 1.2E+02 0.0041 24.5 5.3 32 221-253 6-37 (70)
473 3pzt_A Endoglucanase; alpha/be 25.3 79 0.0027 31.9 5.5 53 118-172 69-127 (327)
474 3prb_A FKBP-type peptidyl-prol 25.3 1.4E+02 0.0049 29.1 7.0 60 187-248 63-128 (231)
475 4e7p_A Response regulator; DNA 25.2 1.5E+02 0.005 25.0 6.5 74 481-556 58-137 (150)
476 2zad_A Muconate cycloisomerase 25.1 1.5E+02 0.0052 29.9 7.6 58 107-171 129-190 (345)
477 3eoo_A Methylisocitrate lyase; 25.1 2.2E+02 0.0076 28.8 8.7 86 305-410 135-231 (298)
478 2p10_A MLL9387 protein; putati 25.0 1.6E+02 0.0054 29.9 7.4 66 349-424 184-259 (286)
479 3l21_A DHDPS, dihydrodipicolin 25.0 3.7E+02 0.013 26.8 10.4 90 349-448 50-141 (304)
480 3n9k_A Glucan 1,3-beta-glucosi 25.0 59 0.002 34.2 4.5 51 119-171 75-134 (399)
481 1jw9_B Molybdopterin biosynthe 24.9 1.5E+02 0.0052 28.6 7.3 65 312-389 88-152 (249)
482 2qiw_A PEP phosphonomutase; st 24.9 5E+02 0.017 25.4 11.4 129 281-423 25-187 (255)
483 3dz1_A Dihydrodipicolinate syn 24.8 2.5E+02 0.0086 28.2 9.1 86 349-448 43-132 (313)
484 3kw2_A Probable R-RNA methyltr 24.8 1.1E+02 0.0038 30.2 6.3 71 221-301 33-108 (257)
485 2b7n_A Probable nicotinate-nuc 24.8 99 0.0034 30.8 5.9 64 286-356 192-258 (273)
486 1vpz_A Carbon storage regulato 24.7 72 0.0025 26.0 3.9 34 217-251 14-47 (73)
487 4d9a_A 2-pyrone-4,6-dicarbaxyl 24.7 38 0.0013 33.8 2.9 61 106-169 96-158 (303)
488 2rdx_A Mandelate racemase/muco 24.7 1.6E+02 0.0056 30.1 7.8 80 294-390 214-295 (379)
489 3jte_A Response regulator rece 24.5 1.6E+02 0.0054 24.4 6.5 61 487-548 47-113 (143)
490 1z85_A Hypothetical protein TM 24.5 1.1E+02 0.0038 29.8 6.1 71 221-302 41-116 (234)
491 3tfx_A Orotidine 5'-phosphate 24.4 89 0.0031 31.1 5.5 66 290-365 151-226 (259)
492 1rh9_A Endo-beta-mannanase; en 24.4 1.5E+02 0.005 29.8 7.3 50 120-171 45-106 (373)
493 3tak_A DHDPS, dihydrodipicolin 24.4 3.6E+02 0.012 26.6 10.1 89 349-448 36-127 (291)
494 2ojp_A DHDPS, dihydrodipicolin 24.3 2E+02 0.0068 28.5 8.2 94 343-447 29-126 (292)
495 3guw_A Uncharacterized protein 24.2 57 0.002 32.2 4.0 95 286-390 14-130 (261)
496 3cwo_X Beta/alpha-barrel prote 24.2 3.9E+02 0.013 24.0 10.0 125 286-433 65-212 (237)
497 3hpd_A Hydroxyethylthiazole ki 24.1 95 0.0033 31.0 5.6 47 338-389 46-92 (265)
498 3f6c_A Positive transcription 24.0 1.7E+02 0.0059 23.7 6.6 72 485-558 42-119 (134)
499 1o66_A 3-methyl-2-oxobutanoate 24.0 1.6E+02 0.0053 29.8 7.2 38 485-523 170-207 (275)
500 3ss7_X D-serine dehydratase; t 23.9 1.7E+02 0.0058 30.9 7.9 119 374-521 174-307 (442)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1e-133 Score=1098.54 Aligned_cols=487 Identities=32% Similarity=0.508 Sum_probs=444.6
Q ss_pred cccccccchHhhhcCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHH-HhCCc
Q 007936 85 SIEVDSVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNE-EKGFA 163 (584)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-e~~~~ 163 (584)
.+++|...+ .+..+ ..++|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++|+|
T Consensus 26 ~~~~~~~~~-~~~~~-~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~ 103 (526)
T 4drs_A 26 CLGMDKICS-PLADN-DVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHST 103 (526)
T ss_dssp HHHHHHC-----------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCC
T ss_pred cccchhhhc-ccccC-CcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCc
Confidence 366776663 33333 3578999999999999999999999999999999999999999999999999999986 68999
Q ss_pred eEEEeecCCCeEEEeecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeC
Q 007936 164 VAIMMDTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIG 243 (584)
Q Consensus 164 i~I~lDl~GpkIR~G~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~ 243 (584)
++||+||+|||||||.+.++.+++|++|++|+|+.+. ...++++.|+++|++|++++++||.|+||||++.|+|.++.+
T Consensus 104 vaIl~Dl~GPkIR~g~~~~~~~i~L~~G~~v~lt~~~-~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~ 182 (526)
T 4drs_A 104 VGIMLDTKGPEIRTGMLEGGKPIELKAGQTLKITTDY-SMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGD 182 (526)
T ss_dssp CEEEEECCCSCCBBCCBSTTCCEECCTTSEEEEESCC-SSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECS
T ss_pred eEEEEECCCCeeEEEecCCCCeEEecCCCEEEEEeCC-ccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeC
Confidence 9999999999999999987667999999999999873 223466799999999999999999999999999999999999
Q ss_pred CeEEEEEEcCceeCCCceeeeccCCcccCCccccCCCCCccCHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc
Q 007936 244 PDVKCRCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARS 322 (584)
Q Consensus 244 ~~i~c~v~~~G~l~s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~ 322 (584)
+.+.|+|++||.|+++|||| +||..+++|.||+||++| |+||+++|+|||++|||++++||.++|++|...+
T Consensus 183 ~~i~~~V~~gG~L~~~KgvN-------lP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g 255 (526)
T 4drs_A 183 DFIVCKVLNSVTIGERKNMN-------LPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENT 255 (526)
T ss_dssp SEEEEECCSCCEECSSCBEE-------CTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCC
T ss_pred CeEEEEeccCcccccccccc-------CCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhC
Confidence 99999999999999999999 999999999999999998 6899999999999999999999999999996432
Q ss_pred C-----CCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhh
Q 007936 323 R-----DSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMI 397 (584)
Q Consensus 323 ~-----~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi 397 (584)
. +.+++||||||+++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||+
T Consensus 256 ~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi 335 (526)
T 4drs_A 256 QYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMI 335 (526)
T ss_dssp TTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGG
T ss_pred cccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHh
Confidence 1 24689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHH
Q 007936 398 EYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEI 477 (584)
Q Consensus 398 ~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 477 (584)
+||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+++.+...+...... .+.+.+..++|
T Consensus 336 ~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~ai 412 (526)
T 4drs_A 336 KSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSS---VPKPVAVPEAI 412 (526)
T ss_dssp SSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH---SCSSCCHHHHH
T ss_pred hCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhc---cCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999976554333222111 12345789999
Q ss_pred HHHHHHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHH
Q 007936 478 CNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLK 557 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k 557 (584)
|.+|+++|++++|++|++||.||+||+++|||||.|||||+|++.+++|+|+|+|||+|+++++..+.|++++.++++++
T Consensus 413 a~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~ 492 (526)
T 4drs_A 413 ACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAK 492 (526)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCEEEEEecC-------CceEEEEEcC
Q 007936 558 ARGMIKSGDLVIAVSDV-------LQSIQVMNVP 584 (584)
Q Consensus 558 ~~g~i~~GD~Vvvv~g~-------~~sI~v~~v~ 584 (584)
++|++++||.||+++|. ||+|||++||
T Consensus 493 ~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 493 EESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp HTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred HCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 99999999999999973 6999999998
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-133 Score=1090.01 Aligned_cols=470 Identities=31% Similarity=0.520 Sum_probs=428.8
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHH-HhCCceEEEeecCCCeEEEe
Q 007936 100 GFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNE-EKGFAVAIMMDTEGSEIHMG 178 (584)
Q Consensus 100 ~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~-e~~~~i~I~lDl~GpkIR~G 178 (584)
....+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++|+|++||+||||||||+|
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~~~vaIllDl~GPkIR~G 120 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTG 120 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBC
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCeEEee
Confidence 33578999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred ecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcCceeCC
Q 007936 179 DLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLP 258 (584)
Q Consensus 179 ~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~G~l~s 258 (584)
.+.++ .++|++|++|+|+.+ +...++++.|+++|++|++++++||+||+|||+|.|+|.++.++.+.|+|++||.|++
T Consensus 121 ~~~~~-~~~L~~G~~~~lt~~-~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~ 198 (520)
T 3khd_A 121 FLKNK-EVHLKEGSKLKLVTD-YEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGE 198 (520)
T ss_dssp EEC------------CEEESC-TTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCS
T ss_pred ccCCC-CeEecCCCEEEEecC-CCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeC
Confidence 99763 469999999999987 2334566899999999999999999999999999999999999999999999999999
Q ss_pred CceeeeccCCcccCCccccCCCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHH
Q 007936 259 RANLTFWRDGSLVRERNAMLPTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESID 337 (584)
Q Consensus 259 ~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~ 337 (584)
+|||| +||..+++|.||+||++|| +|++++|+|||++|||++++||.++|+++ .+.+.++.|||||||++
T Consensus 199 ~KgvN-------lPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l--~~~g~~i~IIAKIE~~e 269 (520)
T 3khd_A 199 RKNMN-------LPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLL--GPRGRHIKIIPKIENIE 269 (520)
T ss_dssp SCEEE-------CTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHH--TTTTTTSEEEEEECSHH
T ss_pred Cceee-------cCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHH--HhcCCCCcEEEEECCHH
Confidence 99999 9999999999999999999 99999999999999999999999999999 45567899999999999
Q ss_pred HHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcc
Q 007936 338 SLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQR 417 (584)
Q Consensus 338 av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G 417 (584)
||+|+|||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||+|||+||
T Consensus 270 av~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldG 349 (520)
T 3khd_A 270 GIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDG 349 (520)
T ss_dssp HHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEcc
Q 007936 418 ADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYT 497 (584)
Q Consensus 418 ~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T 497 (584)
+||+|||||||.|+||+|||++|++||+++|+.+.+...+.... . ....+.+..++||.+|+++|++++|++|++||
T Consensus 350 aDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~-~--~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T 426 (520)
T 3khd_A 350 TDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLV-N--AIETPISVQEAVARSAVETAESIQASLIIALT 426 (520)
T ss_dssp CSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-H--HSCSCCCHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhh-h--ccCCCCCHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999999999999999999999999998754432221110 0 01123468899999999999999999999999
Q ss_pred CCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecC---
Q 007936 498 KTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDV--- 574 (584)
Q Consensus 498 ~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g~--- 574 (584)
.||+||+++|||||.|||||+|++++++|||+|+|||+|++++...+.|++++.++++++++|++++||.||+++|+
T Consensus 427 ~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g 506 (520)
T 3khd_A 427 ETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEE 506 (520)
T ss_dssp SSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCS
T ss_pred CCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCC
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999884
Q ss_pred ----CceEEEEEc
Q 007936 575 ----LQSIQVMNV 583 (584)
Q Consensus 575 ----~~sI~v~~v 583 (584)
+|+|||.+|
T Consensus 507 ~~G~TN~lrv~~v 519 (520)
T 3khd_A 507 VSGGTNLMKVVQI 519 (520)
T ss_dssp STTCEEEEEEEEC
T ss_pred CCCCCeEEEEEEe
Confidence 699999986
No 3
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=7.8e-133 Score=1084.82 Aligned_cols=471 Identities=32% Similarity=0.570 Sum_probs=439.4
Q ss_pred CCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeEEEeec
Q 007936 101 FRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDL 180 (584)
Q Consensus 101 ~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkIR~G~~ 180 (584)
-..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||||||||+|.+
T Consensus 16 ~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 95 (499)
T 3hqn_D 16 VANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQF 95 (499)
T ss_dssp CCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCB
T ss_pred cccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeecc
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEeeCCCEEEEeecc-cCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEe-CCeEEEEEEcCceeCC
Q 007936 181 SGPPSARAEDGEIWTFTVRA-FDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKI-GPDVKCRCTDPGLLLP 258 (584)
Q Consensus 181 ~~~~~i~l~~G~~v~~t~~~-~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~-~~~i~c~v~~~G~l~s 258 (584)
.++..+ |++|++|+|+.++ +...++++.|+++|++|++++++||.||+|||+|.|+|.++. ++.+.|+|++||.|++
T Consensus 96 ~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L~~ 174 (499)
T 3hqn_D 96 VGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTISD 174 (499)
T ss_dssp GGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEEET
T ss_pred CCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEeeC
Confidence 764457 9999999999874 344567789999999999999999999999999999999997 6799999999999999
Q ss_pred CceeeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH
Q 007936 259 RANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS 338 (584)
Q Consensus 259 ~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a 338 (584)
+|||| +||..+++|.||+||++||+|++++|+|||++|||++++||.++|+++. +.+.++.|||||||++|
T Consensus 175 ~KgvN-------lPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~--~~~~~i~IiaKIE~~ea 245 (499)
T 3hqn_D 175 RRGVN-------LPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALG--PKGRDIMIICKIENHQG 245 (499)
T ss_dssp TCBEE-------CTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC--GGGTTSEEEEEECSHHH
T ss_pred CCcee-------cCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHH--hcCCCCeEEEEECCHHH
Confidence 99999 9999999999999999999999999999999999999999999999994 44668999999999999
Q ss_pred HhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHccc
Q 007936 339 LKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA 418 (584)
Q Consensus 339 v~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~ 418 (584)
|+|+|||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||+|||+||+
T Consensus 246 v~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~ 325 (499)
T 3hqn_D 246 VQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGA 325 (499)
T ss_dssp HHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccC
Q 007936 419 DALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTK 498 (584)
Q Consensus 419 D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~ 498 (584)
||+|||||||.|+||+|||++|++||+++|+++.+...+...... ...+.+..++||.+|+++|++++|++|++||.
T Consensus 326 DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~ 402 (499)
T 3hqn_D 326 DCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKL---QHIPMSADEAVCSSAVNSVYETKAKAMVVLSN 402 (499)
T ss_dssp SEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHT---CCSSCCHHHHHHHHHHHHHHHHTCSEEEEECS
T ss_pred cEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhc---cCCCCCHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 999999999999999999999999999999876543322211111 11234788999999999999999999999999
Q ss_pred CchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCC-----CCHHHHHHHHHHHHHHcCCCCCCCEEEEEec
Q 007936 499 TGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFS-----DDMESNLNRTFSLLKARGMIKSGDLVIAVSD 573 (584)
Q Consensus 499 sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~-----~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g 573 (584)
||+||+++|||||.|||||+|++++++|||+|+|||+|++++.. .+.+++++.++++++++|++++||.||+++|
T Consensus 403 SG~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G 482 (499)
T 3hqn_D 403 TGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHA 482 (499)
T ss_dssp SSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEE
T ss_pred CcHHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeC
Confidence 99999999999999999999999999999999999999998754 3789999999999999999999999999998
Q ss_pred C------CceEEEEEcC
Q 007936 574 V------LQSIQVMNVP 584 (584)
Q Consensus 574 ~------~~sI~v~~v~ 584 (584)
. +|++||++|.
T Consensus 483 ~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 483 DHKVKGYANQTRILLVE 499 (499)
T ss_dssp CC-----CEEEEEEECC
T ss_pred CCCCCCCCeEEEEEEcC
Confidence 4 7999999873
No 4
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=2.8e-132 Score=1088.41 Aligned_cols=471 Identities=33% Similarity=0.536 Sum_probs=440.8
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHH------hCCceEEEeecCCCeE
Q 007936 102 RSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEE------KGFAVAIMMDTEGSEI 175 (584)
Q Consensus 102 ~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e------~~~~i~I~lDl~GpkI 175 (584)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|+++++ +|+||+||+|||||||
T Consensus 59 ~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~~~vaIllDlkGPkI 138 (550)
T 3gr4_A 59 ITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEI 138 (550)
T ss_dssp CSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCC
T ss_pred ccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccCceEEEEEeCCCCEE
Confidence 4579999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred EEeecCCC--CceEeeCCCEEEEeecc-cCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEc
Q 007936 176 HMGDLSGP--PSARAEDGEIWTFTVRA-FDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTD 252 (584)
Q Consensus 176 R~G~~~~~--~~i~l~~G~~v~~t~~~-~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~ 252 (584)
|+|.+.++ .+++|++|++|+|+.++ +...++++.|++||++|++++++||+||||||+|.|+|.++.++.+.|+|++
T Consensus 139 R~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~v~~~V~~ 218 (550)
T 3gr4_A 139 RTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVEN 218 (550)
T ss_dssp BBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEEEE
T ss_pred EEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCEEEEEEEe
Confidence 99999642 47999999999999874 4445677899999999999999999999999999999999999999999999
Q ss_pred CceeCCCceeeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEe
Q 007936 253 PGLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAK 332 (584)
Q Consensus 253 ~G~l~s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAK 332 (584)
||.|+++|||| +||..+++|.||+||++||+|++++|+|||++|||++++||+++|+++ .+.+.++.||||
T Consensus 219 gG~L~s~KgvN-------lPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L--~~~g~~i~IIAK 289 (550)
T 3gr4_A 219 GGSLGSKKGVN-------LPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVL--GEKGKNIKIISK 289 (550)
T ss_dssp CEEECSSCBEE-------CTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH--TTTTTTSEEEEE
T ss_pred CcEEcCCceee-------cCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHH--HhcCCCceEEEE
Confidence 99999999999 999999999999999999999999999999999999999999999999 455678999999
Q ss_pred ecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH
Q 007936 333 IESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE 412 (584)
Q Consensus 333 IEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n 412 (584)
|||++||+|+|||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||++||+|||||++||+|
T Consensus 290 IE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVan 369 (550)
T 3gr4_A 290 IENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVAN 369 (550)
T ss_dssp ECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcE
Q 007936 413 AVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDA 492 (584)
Q Consensus 413 av~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~a 492 (584)
||+||+||+|||||||.|+||+|||++|++||+++|+...+...+.... .. ...+.+..++||.+|+++|++++|++
T Consensus 370 AvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~--~~-~~~~~~~~~aia~aa~~~A~~l~a~a 446 (550)
T 3gr4_A 370 AVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELR--RL-APITSDPTEATAVGAVEASFKCCSGA 446 (550)
T ss_dssp HHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH--HH-SCCCCCHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhh--hc-cCCCCChHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999999999999999999999998654432222111 00 11244788999999999999999999
Q ss_pred EEEccCCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCC------CCHHHHHHHHHHHHHHcCCCCCCC
Q 007936 493 LFVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFS------DDMESNLNRTFSLLKARGMIKSGD 566 (584)
Q Consensus 493 Ivv~T~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~------~d~~~~i~~~~~~~k~~g~i~~GD 566 (584)
|++||.||+||+++|||||.|||||+|++++++|||+|+|||+|++++.. .+.+++++.++++++++|++++||
T Consensus 447 Iv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD 526 (550)
T 3gr4_A 447 IIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGD 526 (550)
T ss_dssp EEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred EEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcC
Confidence 99999999999999999999999999999999999999999999998754 467889999999999999999999
Q ss_pred EEEEEecC------CceEEEEEcC
Q 007936 567 LVIAVSDV------LQSIQVMNVP 584 (584)
Q Consensus 567 ~Vvvv~g~------~~sI~v~~v~ 584 (584)
.||+++|+ +|+|||.+||
T Consensus 527 ~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 527 VVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp EEEEEEESSSSTTCEEEEEEEECC
T ss_pred EEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999984 6999999987
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=3e-132 Score=1081.63 Aligned_cols=470 Identities=32% Similarity=0.528 Sum_probs=436.2
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHh-CCceEEEeecCCCeEEEeec
Q 007936 102 RSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEK-GFAVAIMMDTEGSEIHMGDL 180 (584)
Q Consensus 102 ~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~-~~~i~I~lDl~GpkIR~G~~ 180 (584)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++ |+|++||+||+|||||+|.+
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC-
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEECCCCEEecccC
Confidence 45799999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcCceeCCCc
Q 007936 181 SGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRA 260 (584)
Q Consensus 181 ~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~G~l~s~K 260 (584)
.+++++.|++|++|+|+.+ +...++++.|+++|++|++++++||.||+|||+|.|+|.++.++.+.|+|++||.|+++|
T Consensus 113 ~~~~~v~L~~G~~~~lt~~-~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~K 191 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTD-YNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERK 191 (511)
T ss_dssp ----CEEECTTCEEEEESC-TTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSC
T ss_pred CCCCCEEEccCCEEEEEEC-CCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCc
Confidence 7645799999999999987 333456789999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCcccCCccccCCCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHH
Q 007936 261 NLTFWRDGSLVRERNAMLPTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSL 339 (584)
Q Consensus 261 gvnf~~~~~~lp~~~~~lp~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av 339 (584)
||| +||..+++|.||+||++|| +|++++|+|||++|||++++||.++|+++. +.+.+++|||||||++|+
T Consensus 192 gvN-------lPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~--~~~~~~~iiaKIE~~eav 262 (511)
T 3gg8_A 192 NMN-------LPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLG--PRGRHIRIIPKIENVEGL 262 (511)
T ss_dssp BEE-------CTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHT--GGGTTCEEEEEECSHHHH
T ss_pred cee-------cCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHH--hcCCCCeEEEEECCHHHH
Confidence 999 9999999999999999999 999999999999999999999999999994 445689999999999999
Q ss_pred hcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccc
Q 007936 340 KNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRAD 419 (584)
Q Consensus 340 ~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D 419 (584)
+|+|||++++|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+|
T Consensus 263 ~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaD 342 (511)
T 3gg8_A 263 VNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTD 342 (511)
T ss_dssp HTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCS
T ss_pred HhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccCC
Q 007936 420 ALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKT 499 (584)
Q Consensus 420 ~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~s 499 (584)
|+|||||||.|+||+|||++|++||+++|+.+.+...+...... ...+.+..++||.+|+++|++++|++|++||.|
T Consensus 343 avMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~S 419 (511)
T 3gg8_A 343 CVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLA---VPPPISTQEAVARAAVETAECVNAAIILALTET 419 (511)
T ss_dssp EEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH---SCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSS
T ss_pred EEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhc---ccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 99999999999999999999999999999865443222111100 112347889999999999999999999999999
Q ss_pred chHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecC-----
Q 007936 500 GHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDV----- 574 (584)
Q Consensus 500 G~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g~----- 574 (584)
|+||+++|||||.|||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++++||.||+++|+
T Consensus 420 G~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~ 499 (511)
T 3gg8_A 420 GQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVA 499 (511)
T ss_dssp SHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC-----
T ss_pred chHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCC
Confidence 999999999999999999999999999999999999999988889999999999999999999999999999884
Q ss_pred --CceEEEEEcC
Q 007936 575 --LQSIQVMNVP 584 (584)
Q Consensus 575 --~~sI~v~~v~ 584 (584)
+|++||.+||
T Consensus 500 G~TN~lrv~~v~ 511 (511)
T 3gg8_A 500 GSSNLLKVLTVE 511 (511)
T ss_dssp -CCEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 7999999986
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=1.3e-130 Score=1088.82 Aligned_cols=472 Identities=34% Similarity=0.559 Sum_probs=438.5
Q ss_pred hhcCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeE
Q 007936 96 LKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEI 175 (584)
Q Consensus 96 ~~~~~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkI 175 (584)
|-+.|-.++|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||+||||
T Consensus 14 ~~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPki 93 (606)
T 3t05_A 14 LVPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEI 93 (606)
T ss_dssp --------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCC
T ss_pred cCcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEE
Confidence 44666677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEE--EEEeCCeEEEEEEcC
Q 007936 176 HMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEV--IEKIGPDVKCRCTDP 253 (584)
Q Consensus 176 R~G~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V--~~~~~~~i~c~v~~~ 253 (584)
|+|.+.+ .+++|++|++++|+.++. .++.+.|+++|++|++++++||+||+|||+|.|+| .++.++.+.|+|++|
T Consensus 94 R~g~~~~-~~i~L~~G~~~~lt~~~~--~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~g 170 (606)
T 3t05_A 94 RTHNMKD-GIIELERGNEVIVSMNEV--EGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNS 170 (606)
T ss_dssp BBCCBTT-SEEECCSSCEEEEESSCC--CBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSC
T ss_pred EeecCCC-CCEEEcCCCEEEEEecCc--CCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEEC
Confidence 9999975 589999999999998853 45667999999999999999999999999999999 778899999999999
Q ss_pred ceeCCCceeeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee
Q 007936 254 GLLLPRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI 333 (584)
Q Consensus 254 G~l~s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI 333 (584)
|.|+++|||| +||..+++|.||+||++||+|++++|+|||++|||++++||+++|+++. +.+.+++|||||
T Consensus 171 G~L~~~KgvN-------lPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~--~~~~~i~IiaKI 241 (606)
T 3t05_A 171 GELKNKKGVN-------LPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILE--EQKANISVFPKI 241 (606)
T ss_dssp CEEETTCBEE-------CSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHH--HTTCCCEEEECC
T ss_pred eEEeCCceEE-------CCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHH--hcCCCCeEEEEe
Confidence 9999999999 9999999999999999999999999999999999999999999999995 456689999999
Q ss_pred cCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHH
Q 007936 334 ESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEA 413 (584)
Q Consensus 334 Et~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~na 413 (584)
||++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||+||
T Consensus 242 E~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanA 321 (606)
T 3t05_A 242 ENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANA 321 (606)
T ss_dssp CSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHH
T ss_pred CCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEE
Q 007936 414 VRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDAL 493 (584)
Q Consensus 414 v~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aI 493 (584)
|+||+||+|||+|||.|+||+|||++|++||+++|+...+...+.... . ..+.+..++||.+|+++|++++|++|
T Consensus 322 v~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~-~----~~~~~~~~aia~aa~~~a~~l~a~aI 396 (606)
T 3t05_A 322 IYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRT-K----LVETSLVNAIGISVAHTALNLNVKAI 396 (606)
T ss_dssp HHHTCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHH-H----HSCCCHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHcCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhc-c----ccCCCHHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999999999999999999998764432221110 0 11346789999999999999999999
Q ss_pred EEccCCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEec
Q 007936 494 FVYTKTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSD 573 (584)
Q Consensus 494 vv~T~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g 573 (584)
++||.||+||+++|||||.|||||+|++++++|||+|+|||+|++++...+.|++++.++++++++|++++||.||+++|
T Consensus 397 v~~T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G 476 (606)
T 3t05_A 397 VAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAG 476 (606)
T ss_dssp EEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCEEEEEEC
T ss_pred EEEcCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999987
Q ss_pred C-------CceEEEEEcC
Q 007936 574 V-------LQSIQVMNVP 584 (584)
Q Consensus 574 ~-------~~sI~v~~v~ 584 (584)
+ +|+|||.+|.
T Consensus 477 ~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 477 VPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp SSTTTCSSCCEEEEEECC
T ss_pred ccCCCCCCccceEEEEec
Confidence 3 7999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=5.5e-130 Score=1059.04 Aligned_cols=462 Identities=33% Similarity=0.539 Sum_probs=418.6
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeEEEeecCCC
Q 007936 104 TRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGP 183 (584)
Q Consensus 104 ~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkIR~G~~~~~ 183 (584)
+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||+|||||+|.+.++
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 80 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG 80 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999722
Q ss_pred CceEeeCCCEEEEeec-ccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcCceeCCCcee
Q 007936 184 PSARAEDGEIWTFTVR-AFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANL 262 (584)
Q Consensus 184 ~~i~l~~G~~v~~t~~-~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~G~l~s~Kgv 262 (584)
+++.|++|++++|+.+ ++ .++++.+++||++|++++++||.||+|||+|.|+|.++.++.+.|+|++||.|+++|||
T Consensus 81 ~~v~L~~G~~~~lt~~~~~--~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~Kgv 158 (470)
T 1e0t_A 81 NDVSLKAGQTFTFTTDKSV--IGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGV 158 (470)
T ss_dssp CCEEECTTCEEEEESCTTC--CBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEE
T ss_pred CceEEecCCEEEEEeCCcc--CCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCcee
Confidence 5799999999999987 33 34567999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcC-CCCceEEEeecCHHHHhc
Q 007936 263 TFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSR-DSDIAVIAKIESIDSLKN 341 (584)
Q Consensus 263 nf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~-~~~i~IiAKIEt~~av~N 341 (584)
| +||..+++|.||++|.+||+|++++|+|+|++|||++++|++++++++. +. +.++.|||||||++|++|
T Consensus 159 N-------lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~--~~~~~~i~IiakIEt~eav~n 229 (470)
T 1e0t_A 159 N-------LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLK--AHGGENIHIISKIENQEGLNN 229 (470)
T ss_dssp E-------CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHH--TTTCTTCEEEEEECSHHHHHT
T ss_pred e-------cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHH--HhcCCCceEEEEECCHHHHHh
Confidence 9 9999999999999999999999999999999999999999999999994 45 567999999999999999
Q ss_pred HHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE
Q 007936 342 LEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL 421 (584)
Q Consensus 342 ldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i 421 (584)
+|||++++|||||||||||+|+|.++|+.+||+|+.+|+++|||||+||||||||++||+|||||++||+|||+||+||+
T Consensus 230 ldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~Dav 309 (470)
T 1e0t_A 230 FDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAV 309 (470)
T ss_dssp HHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccCCch
Q 007936 422 MLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGH 501 (584)
Q Consensus 422 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~sG~ 501 (584)
|||||||.|+||+|||++|++||+++|+.+.+...+ .... ...+..++||.+|+++|++++|++|++||.||+
T Consensus 310 MLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~-----~~~~--~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ 382 (470)
T 1e0t_A 310 MLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEF-----NNDN--RKLRITEAVCRGAVETAEKLDAPLIVVATQGGK 382 (470)
T ss_dssp EECCC------CHHHHHHHHHHHHHHHTTCCCCCC----------------CHHHHHHHHHHHHHHTTCSBEEEECSSSH
T ss_pred EecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHH-----hhhc--cccchHHHHHHHHHHHHHhcCCCEEEEECCChh
Confidence 999999999999999999999999999864321111 1011 113568999999999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEec------CC
Q 007936 502 MASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSD------VL 575 (584)
Q Consensus 502 tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g------~~ 575 (584)
||+++|||||.|||||+|++++++|||+|+|||+|+++++..+.+++++.++++++++|++++||.||+++| .+
T Consensus 383 ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~t 462 (470)
T 1e0t_A 383 SARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTT 462 (470)
T ss_dssp HHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSSSCTTCC
T ss_pred HHHHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCCCCCCCcc
Confidence 999999999999999999999999999999999999999889999999999999999999999999999986 36
Q ss_pred ceEEEEEc
Q 007936 576 QSIQVMNV 583 (584)
Q Consensus 576 ~sI~v~~v 583 (584)
|+|||++|
T Consensus 463 n~~~v~~v 470 (470)
T 1e0t_A 463 NTASVHVL 470 (470)
T ss_dssp CEEEEEEC
T ss_pred ceEEEEEC
Confidence 99999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=4.6e-127 Score=1062.11 Aligned_cols=463 Identities=35% Similarity=0.575 Sum_probs=435.4
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeEEEeecCCC
Q 007936 104 TRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGDLSGP 183 (584)
Q Consensus 104 ~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkIR~G~~~~~ 183 (584)
+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++||+||+|||||+|.+.+
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~- 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMEN- 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTT-
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCC-
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEE--eCCeEEEEEEcCceeCCCce
Q 007936 184 PSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEK--IGPDVKCRCTDPGLLLPRAN 261 (584)
Q Consensus 184 ~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~--~~~~i~c~v~~~G~l~s~Kg 261 (584)
+++.|++|++++|+.++. .++++.++++|++|++++++||+||+|||+|.|+|.++ .++.+.|+|++||.|++|||
T Consensus 81 ~~i~l~~G~~~~l~~~~~--~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kg 158 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEV--LGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKG 158 (587)
T ss_dssp SCBCCCSSCEEEEESSCC--CCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCB
T ss_pred CcEEEecCCEEEEEecCc--CCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCce
Confidence 479999999999998743 45667999999999999999999999999999999999 88999999999999999999
Q ss_pred eeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCC-CCceEEEeecCHHHHh
Q 007936 262 LTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRD-SDIAVIAKIESIDSLK 340 (584)
Q Consensus 262 vnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~-~~i~IiAKIEt~~av~ 340 (584)
|| +||..+++|.||+||.+||+|++++|+|||++|||++++|++++|++++ +.+ .++.||||||+++|++
T Consensus 159 vn-------lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~--~~~~~~~~iiakIE~~eav~ 229 (587)
T 2e28_A 159 VN-------VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLE--AHDALHIQIIAKIENEEGVA 229 (587)
T ss_dssp EE-------CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHH--HTTCTTSEEEEEECSHHHHH
T ss_pred ee-------cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHH--HcCCCCceEEEEECCHHHHH
Confidence 99 9999999999999999999999999999999999999999999999994 445 3799999999999999
Q ss_pred cHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccce
Q 007936 341 NLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADA 420 (584)
Q Consensus 341 NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~ 420 (584)
|||||++++|||||||||||+|+|+|+||.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||+||
T Consensus 230 nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~Da 309 (587)
T 2e28_A 230 NIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDA 309 (587)
T ss_dssp THHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSE
T ss_pred hHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccCCc
Q 007936 421 LMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTG 500 (584)
Q Consensus 421 imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~sG 500 (584)
+|||+|||.|+||+|||++|++||+++|+.+++...+.... ...+.+..++||.+|+++|++++|++|++||.||
T Consensus 310 vMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~-----~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG 384 (587)
T 2e28_A 310 VMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRT-----KESQTTITDAIGQSVAHTALNLDVAAIVTPTVSG 384 (587)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-----TTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred eeecccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhh-----cccccchHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 99999999999999999999999999998654321111110 1112367899999999999999999999999999
Q ss_pred hHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecC------
Q 007936 501 HMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDV------ 574 (584)
Q Consensus 501 ~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g~------ 574 (584)
+||+++|||||.|||||+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|+++.||.|++++|.
T Consensus 385 ~ta~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~P~g~~G 464 (587)
T 2e28_A 385 KTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETG 464 (587)
T ss_dssp HHHHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCC
T ss_pred HHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccccceEEEecCcccCcCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999873
Q ss_pred -CceEEEEEc
Q 007936 575 -LQSIQVMNV 583 (584)
Q Consensus 575 -~~sI~v~~v 583 (584)
+|++++.++
T Consensus 465 ~TN~LkI~~V 474 (587)
T 2e28_A 465 STNLMKVHVI 474 (587)
T ss_dssp CCCEEEEEEC
T ss_pred CCceEEEEEE
Confidence 699998765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.5e-127 Score=1032.90 Aligned_cols=442 Identities=27% Similarity=0.433 Sum_probs=420.8
Q ss_pred CCCCCceEEEecCCCCCCHH--HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeEEEee
Q 007936 102 RSTRRTKLVCTIGPATCGFE--QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEIHMGD 179 (584)
Q Consensus 102 ~~~r~tKIi~TiGPa~~~~e--~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkIR~G~ 179 (584)
+++|||||||||||+|+++| +|++|+++ |||||||||||++|+|+++++++|++++++|+|++||+||+|||||+|.
T Consensus 12 ~~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 12 RARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CCSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCCB
T ss_pred hccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEECC
Confidence 46799999999999999988 99999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcCceeCCC
Q 007936 180 LSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDPGLLLPR 259 (584)
Q Consensus 180 ~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~G~l~s~ 259 (584)
+. +++|++|++|+|+.++..+ + +.|+++|++|++++++||.||+|||+|.|+|.++.++.+.|+|++||.|+++
T Consensus 91 ~~---~v~L~~G~~~~lt~~~~~~--~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~ 164 (461)
T 3qtg_A 91 TS---PINVQEGEVVKFKLSDKSD--G-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGG 164 (461)
T ss_dssp CS---CEEECTTCEEEEEECSBCC--S-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTT
T ss_pred CC---CEEEeCCCEEEEEecCCCC--C-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCC
Confidence 95 3999999999999875433 3 6899999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccCCcccCCccccCCCCCccCHhhhH--HhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHH
Q 007936 260 ANLTFWRDGSLVRERNAMLPTISPKDWLDID--FGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESID 337 (584)
Q Consensus 260 Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~--~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~ 337 (584)
|||| +||..+++|.||+||++||+ |++++|+|||++|||++++||.++|+++. +.+.+++|||||||++
T Consensus 165 KgvN-------lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~--~~g~~~~iiaKIE~~e 235 (461)
T 3qtg_A 165 KAIV-------VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLT--ELGFQSQVAVKIETKG 235 (461)
T ss_dssp CBEE-------ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHH--HTTCCCEEEEEECSHH
T ss_pred Ccee-------cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHH--hcCCCceEEEEECCHH
Confidence 9999 99999999999999999999 99999999999999999999999999994 4566799999999999
Q ss_pred HHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcc
Q 007936 338 SLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQR 417 (584)
Q Consensus 338 av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G 417 (584)
|++|+|||++++|||||||||||+|+|+|+|+.+||+|+++|+++|||||+||||||||++||+|||||++||+|||+||
T Consensus 236 av~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dG 315 (461)
T 3qtg_A 236 AVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMG 315 (461)
T ss_dssp HHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEcc
Q 007936 418 ADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYT 497 (584)
Q Consensus 418 ~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T 497 (584)
+||+|||||||.|+||+|||++|++||+++|++..+ + ..+.+..++||.+|+++|++++|+ |++||
T Consensus 316 aDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~------~-------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T 381 (461)
T 3qtg_A 316 VDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQ------S-------PLLQNSRDRFAKGLVELAQDLGAN-ILVFS 381 (461)
T ss_dssp CSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCC------C-------CCCCSHHHHHHHHHHHHHHHHTCE-EEEEC
T ss_pred CcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhh------c-------cCCCCHHHHHHHHHHHHHHhcCCC-EEEEC
Confidence 999999999999999999999999999999986421 0 124478899999999999999999 99999
Q ss_pred CCchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEecC---
Q 007936 498 KTGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTFSLLKARGMIKSGDLVIAVSDV--- 574 (584)
Q Consensus 498 ~sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~g~--- 574 (584)
.||+||+++|||||.|||||+|++++++|||+|+|||+|++++ ..+.|++++.++++++++| ||+++|.
T Consensus 382 ~SG~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g-------vvit~g~p~~ 453 (461)
T 3qtg_A 382 MSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP-------FVATYGIRGG 453 (461)
T ss_dssp SSSHHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS-------EEEEECCTTS
T ss_pred CCcHHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC-------EEEEeccCCC
Confidence 9999999999999999999999999999999999999999998 7889999999999999988 8888874
Q ss_pred CceEEEE
Q 007936 575 LQSIQVM 581 (584)
Q Consensus 575 ~~sI~v~ 581 (584)
+|+|||+
T Consensus 454 TN~~~v~ 460 (461)
T 3qtg_A 454 VHSVKVK 460 (461)
T ss_dssp CCEEEEE
T ss_pred CeEEEEE
Confidence 8999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=8.1e-125 Score=1026.01 Aligned_cols=470 Identities=31% Similarity=0.518 Sum_probs=436.3
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhC-CceEEEeecCCCeEEEeec
Q 007936 102 RSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKG-FAVAIMMDTEGSEIHMGDL 180 (584)
Q Consensus 102 ~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~-~~i~I~lDl~GpkIR~G~~ 180 (584)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++| +|++||+||+|||||+|.|
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 457999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCceEeeCCCEEEEeecc-cCCCCCCCEEEecccchhcccCCCCEEEEeCCeeEEEEEEE-eCCeEEEEEEcCceeCC
Q 007936 181 SGPPSARAEDGEIWTFTVRA-FDSPRPERTITVNYDGFAEDVKVGDELLVDGGMVRFEVIEK-IGPDVKCRCTDPGLLLP 258 (584)
Q Consensus 181 ~~~~~i~l~~G~~v~~t~~~-~~~~~~~~~i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~-~~~~i~c~v~~~G~l~s 258 (584)
.++.++.|++|++|+|+.+. +...++++.|++||++|++++++||.||+|||+|.|+|.++ .++.+.|+|++||.|++
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~~v~~~v~~gG~L~~ 175 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICS 175 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC--CEEEEBCSCCCCCS
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEccCCeEEEEEecCCEEeC
Confidence 76457999999999999874 33456678899999999999999999999999999999999 89999999999999999
Q ss_pred CceeeeccCCcccCCccccCCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH
Q 007936 259 RANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS 338 (584)
Q Consensus 259 ~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a 338 (584)
||||| +||..+++|.||++|.+||+|+++.|+|+|++|||++++|++++++++.. .+.++.||+||||++|
T Consensus 176 ~KgvN-------lPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~--~~~~i~IiakIEt~ea 246 (500)
T 1a3w_A 176 HKGVN-------LPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGE--QGKDVKIIVKIENQQG 246 (500)
T ss_dssp SCBEE-------CTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHH--HHTTSEEEEEECSSHH
T ss_pred CCCCc-------CCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHh--cCCCcEEEEEECChHH
Confidence 99999 99999999999999999999999999999999999999999999999953 3457999999999999
Q ss_pred HhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHccc
Q 007936 339 LKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA 418 (584)
Q Consensus 339 v~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~ 418 (584)
++|+|||++++|||||||||||+|+|.++|+.+|++|+.+|+++|||+|+||||||||+.+|.|||||++|++||+.+|+
T Consensus 247 v~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~ 326 (500)
T 1a3w_A 247 VNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGA 326 (500)
T ss_dssp HHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccC
Q 007936 419 DALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTK 498 (584)
Q Consensus 419 D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~ 498 (584)
|++|||+||+.|+||+|||++|++||+++|+.+.+...+.... .. ...+.+..++||.+|+++|++++|++|++||.
T Consensus 327 d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~-~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~ 403 (500)
T 1a3w_A 327 DCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMR--NC-TPKPTSTTETVAASAVAAVFEQKAKAIIVLST 403 (500)
T ss_dssp SEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHT--TS-CCSSCCHHHHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhh--hc-cccccchHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 9999999999999999999999999999999654332222111 10 11123578999999999999999999999999
Q ss_pred CchHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecC------CCCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Q 007936 499 TGHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSF------SDDMESNLNRTFSLLKARGMIKSGDLVIAVS 572 (584)
Q Consensus 499 sG~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~------~~d~~~~i~~~~~~~k~~g~i~~GD~Vvvv~ 572 (584)
||+||+++|||||.|||||+|++++++|||+|+|||+|++++. ..+.+++++.++++++++|++++||.||+++
T Consensus 404 sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~ 483 (500)
T 1a3w_A 404 SGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQ 483 (500)
T ss_dssp SSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEEEEE
T ss_pred CchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEEEEEe
Confidence 9999999999999999999999999999999999999999875 6778999999999999999999999999998
Q ss_pred c------CCceEEEEEc
Q 007936 573 D------VLQSIQVMNV 583 (584)
Q Consensus 573 g------~~~sI~v~~v 583 (584)
| .+|+|||++|
T Consensus 484 g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 484 GFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp CCCTTTCCCCEEEEEEC
T ss_pred cccCCCCCCceEEEEEC
Confidence 7 3699999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.75 E-value=1.5e-18 Score=182.06 Aligned_cols=150 Identities=15% Similarity=0.182 Sum_probs=129.7
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc-----C-------------------------CCCceEEEeecC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARS-----R-------------------------DSDIAVIAKIES 335 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~-----~-------------------------~~~i~IiAKIEt 335 (584)
-.||+++++.|+++|++|||++++|++++++.+++.. . +.++.|++||||
T Consensus 107 ~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 107 EVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 4799999999999999999999999999999996410 0 124789999999
Q ss_pred HHHHhcHHHHHHh--CCEEEEeCCccccc--------CCC---CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC
Q 007936 336 IDSLKNLEEIILA--SDGAMVARGDLGAQ--------IPL---EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTP 402 (584)
Q Consensus 336 ~~av~NldeIl~~--sDGImIaRGDLg~e--------i~~---e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~P 402 (584)
++|+.|+++|+++ +|+++||++||+.+ +|. +.|..++++|+.+|+++|||++..+ ..|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH
Confidence 9999999999975 89999999999999 887 6799999999999999999997653 222
Q ss_pred ChhhHHHHHHHHHcccceEeecCCCCC--CCChHHHHHHHHHHHHHHhhh
Q 007936 403 TRAEVADVSEAVRQRADALMLSGESAM--GQFPDKALTVLRSVSLRIEKW 450 (584)
Q Consensus 403 TrAEv~Dv~nav~~G~D~imLs~ETa~--G~yPveaV~~m~~I~~~aE~~ 450 (584)
.++.+++.+|+|+++++.++.. +.| .+.|+++++|+.++|+.
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 5778899999999999998876 666 78899999999888864
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.70 E-value=8.3e-19 Score=178.15 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=109.1
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc-------------------------CCCCceEEEeecCHHH
Q 007936 284 KDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARS-------------------------RDSDIAVIAKIESIDS 338 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~-------------------------~~~~i~IiAKIEt~~a 338 (584)
.|..+|+++++.|+|+|++|||+|++|++++++.+++.. .+.++.|+++|||++|
T Consensus 78 ~~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~a 157 (267)
T 2vws_A 78 GSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTA 157 (267)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHH
T ss_pred CCHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHH
Confidence 356889999999999999999999999999999885310 1124789999999999
Q ss_pred HhcHHHHHHh--CCEEEEeCCcccccCCC------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHH
Q 007936 339 LKNLEEIILA--SDGAMVARGDLGAQIPL------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADV 410 (584)
Q Consensus 339 v~NldeIl~~--sDGImIaRGDLg~ei~~------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv 410 (584)
+.|++||+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| ...
T Consensus 158 v~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~---------~d~-----~~a 223 (267)
T 2vws_A 158 LDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA---------VAP-----DMA 223 (267)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC---------SSH-----HHH
T ss_pred HHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec---------CCH-----HHH
Confidence 9999999988 89999999999999987 4688999999999999999998742 122 244
Q ss_pred HHHHHcccceEeecCCC
Q 007936 411 SEAVRQRADALMLSGES 427 (584)
Q Consensus 411 ~nav~~G~D~imLs~ET 427 (584)
..++.+|++.+..+.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 224 QQCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHCCCCEEEEchHH
Confidence 66788899988888654
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.68 E-value=3.3e-18 Score=175.66 Aligned_cols=131 Identities=17% Similarity=0.213 Sum_probs=109.4
Q ss_pred ccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc-------------------------CCCCceEEEeecCHH
Q 007936 283 PKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARS-------------------------RDSDIAVIAKIESID 337 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~-------------------------~~~~i~IiAKIEt~~ 337 (584)
+.|..||+++++.|+|+|++|||+|++|++++++.+++.. .+.++.|++||||++
T Consensus 98 ~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 98 WNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 4566799999999999999999999999999999875311 112478999999999
Q ss_pred HHhcHHHHHHh--CCEEEEeCCcccccCCC------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHH
Q 007936 338 SLKNLEEIILA--SDGAMVARGDLGAQIPL------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVAD 409 (584)
Q Consensus 338 av~NldeIl~~--sDGImIaRGDLg~ei~~------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~D 409 (584)
|++|+++|+++ +|+++||++||+.++|. ++|..++++++.+|+++|||+++.+ ..|. .
T Consensus 178 av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~---------~d~~-----~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI---------ANEQ-----L 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC---------CCHH-----H
T ss_pred HHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec---------CCHH-----H
Confidence 99999999985 89999999999999987 4688999999999999999998732 2332 3
Q ss_pred HHHHHHcccceEeecCCC
Q 007936 410 VSEAVRQRADALMLSGES 427 (584)
Q Consensus 410 v~nav~~G~D~imLs~ET 427 (584)
...++.+|++.+..+.++
T Consensus 244 a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHhCCCEEEECcHH
Confidence 456778899998888664
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.66 E-value=1.6e-16 Score=161.06 Aligned_cols=131 Identities=19% Similarity=0.252 Sum_probs=111.2
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc-------------------------CCCCceEEEeecCHHHH
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARS-------------------------RDSDIAVIAKIESIDSL 339 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~-------------------------~~~~i~IiAKIEt~~av 339 (584)
|..||+++++.|+|+|++|||+|++|++++.+.+++.. .+.++.++++|||++|+
T Consensus 77 ~~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av 156 (261)
T 3qz6_A 77 DRAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAV 156 (261)
T ss_dssp CHHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred CHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHH
Confidence 44699999999999999999999999999999985411 13468999999999999
Q ss_pred hcHHHHHHh--CCEEEEeCCcccccCCCC------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH
Q 007936 340 KNLEEIILA--SDGAMVARGDLGAQIPLE------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS 411 (584)
Q Consensus 340 ~NldeIl~~--sDGImIaRGDLg~ei~~e------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~ 411 (584)
.|+++|+++ +|+++||++||+.+++.. .+..++++++.+|+++|||+++.+ ..|..++ .
T Consensus 157 ~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~ 223 (261)
T 3qz6_A 157 EDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----G 223 (261)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----H
T ss_pred HHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----H
Confidence 999999954 899999999999999873 689999999999999999998863 2444442 3
Q ss_pred HHHHcccceEeecCCCC
Q 007936 412 EAVRQRADALMLSGESA 428 (584)
Q Consensus 412 nav~~G~D~imLs~ETa 428 (584)
..+..|++.+.++.++.
T Consensus 224 ~~~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 224 WAVERGAQMLLWSGDVA 240 (261)
T ss_dssp HHHHTTCCEEEEEEHHH
T ss_pred HHHHCCCCEEEEhhHHH
Confidence 45789999999997753
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.65 E-value=2.1e-16 Score=159.48 Aligned_cols=131 Identities=21% Similarity=0.252 Sum_probs=110.6
Q ss_pred ccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhh------------------------cCCCCceEEEeecCHHH
Q 007936 283 PKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAAR------------------------SRDSDIAVIAKIESIDS 338 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~------------------------~~~~~i~IiAKIEt~~a 338 (584)
+.|..+|+++++.|+|+|++|||++++|++++++.+++. ..+.++.|+++|||++|
T Consensus 78 ~~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~a 157 (256)
T 1dxe_A 78 TNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQG 157 (256)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHH
T ss_pred CCCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHH
Confidence 455667999999999999999999999999999998530 12356899999999999
Q ss_pred HhcHHHHHHh--CCEEEEeCCcccccCCC------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHH
Q 007936 339 LKNLEEIILA--SDGAMVARGDLGAQIPL------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADV 410 (584)
Q Consensus 339 v~NldeIl~~--sDGImIaRGDLg~ei~~------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv 410 (584)
+.|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ .. -.+.
T Consensus 158 v~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d-----~~~~ 223 (256)
T 1dxe_A 158 VDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PV-----EADA 223 (256)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CS-----HHHH
T ss_pred HHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CC-----HHHH
Confidence 9999999984 89999999999999987 4689999999999999999998732 11 2244
Q ss_pred HHHHHcccceEeecCCC
Q 007936 411 SEAVRQRADALMLSGES 427 (584)
Q Consensus 411 ~nav~~G~D~imLs~ET 427 (584)
..++..|++.+..+.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 224 RRYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHcCCCEEEechHH
Confidence 66789999999888664
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.54 E-value=1.3e-14 Score=148.26 Aligned_cols=132 Identities=11% Similarity=0.066 Sum_probs=107.4
Q ss_pred ccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH--hCCEEEEeCCccc
Q 007936 283 PKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL--ASDGAMVARGDLG 360 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~--~sDGImIaRGDLg 360 (584)
+++..||++.++ |+|+|++|||++++|++++++.+++. |.++.++++|||++|+.|+++|+. .+|++++|++||+
T Consensus 81 ~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~--g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~ 157 (284)
T 1sgj_A 81 PYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQER--SLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYT 157 (284)
T ss_dssp TTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHT--TCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHH
T ss_pred HhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhc--CCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHH
Confidence 567889999999 99999999999999999999999643 457899999999999999999996 3799999999999
Q ss_pred ccCCC------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 361 AQIPL------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 361 ~ei~~------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
.+++. +.+..++++++.+|+++|||++.. +.....-...-..+...+...|+|+-+.
T Consensus 158 ~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 158 TDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 99998 679999999999999999998532 1000000000114566788999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.28 E-value=1.1e-11 Score=129.27 Aligned_cols=136 Identities=14% Similarity=0.121 Sum_probs=109.7
Q ss_pred CCCCCccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------h--cCCCCceEEEeecCHHHHhcHHHHHHh
Q 007936 278 LPTISPKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAA-------R--SRDSDIAVIAKIESIDSLKNLEEIILA 348 (584)
Q Consensus 278 lp~lt~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~-------~--~~~~~i~IiAKIEt~~av~NldeIl~~ 348 (584)
-|.+-+.|...|..+++.|.+.|++|+|++++++++++++++. . ..+.++.++++|||+.|+.|+|+|+++
T Consensus 117 ~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~ 196 (324)
T 2xz9_A 117 RPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE 196 (324)
T ss_dssp CHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT
T ss_pred chhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 3455566778888999999999999999999998888888752 1 123468999999999999999999999
Q ss_pred CCEEEEeCCcccc-cCCC---------------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH
Q 007936 349 SDGAMVARGDLGA-QIPL---------------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE 412 (584)
Q Consensus 349 sDGImIaRGDLg~-ei~~---------------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n 412 (584)
+|++.||..||+. .++. +.|..+.++++.+|+++|||+.++.++- ..| ..+..
T Consensus 197 vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~------~dp-----~~~~~ 265 (324)
T 2xz9_A 197 VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA------GDP-----LAAVI 265 (324)
T ss_dssp CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCH-----HHHHH
T ss_pred CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC------CCH-----HHHHH
Confidence 9999999999995 3331 3577888999999999999999987641 122 34466
Q ss_pred HHHcccceEeec
Q 007936 413 AVRQRADALMLS 424 (584)
Q Consensus 413 av~~G~D~imLs 424 (584)
++..|+|.+..+
T Consensus 266 l~~lG~~~~si~ 277 (324)
T 2xz9_A 266 LLGLGLDEFSMS 277 (324)
T ss_dssp HHHHTCCEEEEC
T ss_pred HHHCCCCEEEEC
Confidence 788999997555
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.15 E-value=6e-11 Score=123.30 Aligned_cols=130 Identities=23% Similarity=0.261 Sum_probs=104.4
Q ss_pred CccCHhhhHHhHhcCC--CEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh---CCEEEEeC
Q 007936 282 SPKDWLDIDFGITEGV--DFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA---SDGAMVAR 356 (584)
Q Consensus 282 t~kD~~dI~~al~~gv--D~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~---sDGImIaR 356 (584)
|++...||+..++.|. |+|.+|+|++++|++.+.+.++ ..+.++.++++|||++|+.|+++|+.. .|++++|.
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~--~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~ 190 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMM--FAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGA 190 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTS--CC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHH--hcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECH
Confidence 4555688999999885 9999999999999999999984 445578999999999999999999984 68999999
Q ss_pred CcccccCCCC----ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChh--h--HHHHHHHHHcccceEee
Q 007936 357 GDLGAQIPLE----QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRA--E--VADVSEAVRQRADALML 423 (584)
Q Consensus 357 GDLg~ei~~e----~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrA--E--v~Dv~nav~~G~D~imL 423 (584)
.||..+++.. .+.++..+++.+|+++|++++-. +.+... | ..+...+...|+++-+.
T Consensus 191 ~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~----------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 191 ADMAADIGAASTWEPLALARARLVSACAMNGIPAIDA----------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC----------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec----------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 9999999874 57788889999999999998542 112111 1 35677788899886444
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.08 E-value=1.9e-10 Score=117.09 Aligned_cols=124 Identities=16% Similarity=0.087 Sum_probs=98.4
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--CCEEEEeCCcccc
Q 007936 284 KDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--SDGAMVARGDLGA 361 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--sDGImIaRGDLg~ 361 (584)
+-..||+..++.|+|+|.+|+|++++|++.+. .+.++++|||++|+.|+++|+.. .||+++|+.||+.
T Consensus 72 ~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~----------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 72 DQARDLEALAGTAYTTVMLPKAESAAQVIELA----------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp HHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT----------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh----------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 44578999999999999999999999999763 58999999999999999999964 5899999999999
Q ss_pred cCCCC-----------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhh-HHHHHHHHHcccceEeec
Q 007936 362 QIPLE-----------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAE-VADVSEAVRQRADALMLS 424 (584)
Q Consensus 362 ei~~e-----------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAE-v~Dv~nav~~G~D~imLs 424 (584)
+++.. .+..+..+++.+|+++|++++... .......+- ..+...+...|+|+-+.-
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v-------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV-------HLDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC-------CSCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCC-------cCCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 99863 267788899999999999885421 111111111 256777889999986663
No 20
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.07 E-value=1.5e-10 Score=133.57 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=110.4
Q ss_pred ccCHhhhHHhHh-cC--CCEEEEcCCCCHHHHHHHHHHHHhhcCC--CC-ceEEEeecCHHHHhcHHHHHHhCCEEEEeC
Q 007936 283 PKDWLDIDFGIT-EG--VDFIAISFVKSAEVINHLKSYIAARSRD--SD-IAVIAKIESIDSLKNLEEIILASDGAMVAR 356 (584)
Q Consensus 283 ~kD~~dI~~al~-~g--vD~I~lSfV~saedV~~lr~~l~~~~~~--~~-i~IiAKIEt~~av~NldeIl~~sDGImIaR 356 (584)
+.+.+.|..+.+ .| .+.|++|||+++++++++++.+++.+.. .+ +.++++||++.|+.|+|+|++++|++.||.
T Consensus 624 ~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~siGt 703 (794)
T 2ols_A 624 ALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGS 703 (794)
T ss_dssp HHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEEEH
T ss_pred HHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEECH
Confidence 446667778888 68 7999999999999999999999764332 33 889999999999999999999999999999
Q ss_pred Cccccc-CCCC---------------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccce
Q 007936 357 GDLGAQ-IPLE---------------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADA 420 (584)
Q Consensus 357 GDLg~e-i~~e---------------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~ 420 (584)
.||+.. ++.. .|..+.++++.+|+++|||+.++.|+--. .| ..+..++..|+|.
T Consensus 704 nDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp-----~~~~~~~~~G~~~ 773 (794)
T 2ols_A 704 NDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HP-----DFAKWLVEEGIES 773 (794)
T ss_dssp HHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CH-----HHHHHHHHHTCCE
T ss_pred HHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CH-----HHHHHHHHCCCCE
Confidence 999987 7753 47888899999999999999998775310 12 2246678899999
Q ss_pred EeecCC
Q 007936 421 LMLSGE 426 (584)
Q Consensus 421 imLs~E 426 (584)
+.++..
T Consensus 774 ~s~~p~ 779 (794)
T 2ols_A 774 VSLNPD 779 (794)
T ss_dssp EEECGG
T ss_pred EEECHh
Confidence 988633
No 21
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.05 E-value=4.8e-10 Score=117.26 Aligned_cols=135 Identities=13% Similarity=0.056 Sum_probs=102.3
Q ss_pred CccCHhhhHHhHhc---CCCEEEEcCCCCHHHHHHHHHHHHhh----cCCCCceEEEeecCHHHHhcHHHHHHh--CCEE
Q 007936 282 SPKDWLDIDFGITE---GVDFIAISFVKSAEVINHLKSYIAAR----SRDSDIAVIAKIESIDSLKNLEEIILA--SDGA 352 (584)
Q Consensus 282 t~kD~~dI~~al~~---gvD~I~lSfV~saedV~~lr~~l~~~----~~~~~i~IiAKIEt~~av~NldeIl~~--sDGI 352 (584)
|++-..||...++. |+|+|.+|+|++++|++.+.+++.+. +....+.++++|||++|+.|+++|++. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 44556788877776 99999999999999999999998642 122468899999999999999999954 6899
Q ss_pred EEeCCcccccCCCC---------------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhh-HHHHHHHH-H
Q 007936 353 MVARGDLGAQIPLE---------------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAE-VADVSEAV-R 415 (584)
Q Consensus 353 mIaRGDLg~ei~~e---------------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAE-v~Dv~nav-~ 415 (584)
++|..||..+++.. .+..+..+++.+|+++|+++|.. + .......+- ..+...+. .
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~ 246 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN------V-CLNLKDAEVIASDACRARNE 246 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC------C-CSCSSCHHHHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC------C-cccccCHHHHHHHHHHHHHh
Confidence 99999999988752 15678889999999999998642 1 111111111 25566677 7
Q ss_pred cccceEee
Q 007936 416 QRADALML 423 (584)
Q Consensus 416 ~G~D~imL 423 (584)
.|+|+-+.
T Consensus 247 lGf~Gk~~ 254 (332)
T 3qqw_A 247 FGFLRMWS 254 (332)
T ss_dssp HCCCEEEE
T ss_pred CCCCcccc
Confidence 89987555
No 22
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.95 E-value=1e-09 Score=122.31 Aligned_cols=131 Identities=15% Similarity=0.073 Sum_probs=106.0
Q ss_pred ccCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------hc--CCCCceEEEeecCHHHHhcHHHHHHhCCEEE
Q 007936 283 PKDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAA-------RS--RDSDIAVIAKIESIDSLKNLEEIILASDGAM 353 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~-------~~--~~~~i~IiAKIEt~~av~NldeIl~~sDGIm 353 (584)
+.+...|..+.+.|...|++|||.++++++++++++.. .+ .+.++.+.++||++.|+.++|+|++.+|++.
T Consensus 371 ~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~s 450 (575)
T 2hwg_A 371 RDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS 450 (575)
T ss_dssp HHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 34456788888899999999999999999888888752 11 2346899999999999999999999999999
Q ss_pred EeCCcccc----------cCCC------CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcc
Q 007936 354 VARGDLGA----------QIPL------EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQR 417 (584)
Q Consensus 354 IaRGDLg~----------ei~~------e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G 417 (584)
||..||+. .++. +.|..+.++++.+|+++|||++++.++ - ..|.- +...+..|
T Consensus 451 iGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~----a--gdp~~-----~~~l~~lG 519 (575)
T 2hwg_A 451 IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGEL----A--GDERA-----TLLLLGMG 519 (575)
T ss_dssp ECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTT----T--TCTTT-----HHHHHHTT
T ss_pred ECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCC----C--CCHHH-----HHHHHHCC
Confidence 99999988 4432 457788899999999999999997652 1 24433 36678899
Q ss_pred cceEeec
Q 007936 418 ADALMLS 424 (584)
Q Consensus 418 ~D~imLs 424 (584)
+|.+..+
T Consensus 520 ~~~~S~~ 526 (575)
T 2hwg_A 520 LDEFSMS 526 (575)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 9997666
No 23
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.95 E-value=3e-09 Score=111.59 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=98.6
Q ss_pred ccCHhhhHHhHhc---CCCEEEEcCCCCHHHHHHHHHHHHhh----cCCCCceEEEeecCHHHHhcHHHHHHh--CCEEE
Q 007936 283 PKDWLDIDFGITE---GVDFIAISFVKSAEVINHLKSYIAAR----SRDSDIAVIAKIESIDSLKNLEEIILA--SDGAM 353 (584)
Q Consensus 283 ~kD~~dI~~al~~---gvD~I~lSfV~saedV~~lr~~l~~~----~~~~~i~IiAKIEt~~av~NldeIl~~--sDGIm 353 (584)
++-..||...++. |+|+|.+|+|++++||+.+.+++.+. +....+.++++|||++|+.|+++|++. .|+++
T Consensus 94 ~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~ 173 (339)
T 3r4i_A 94 AHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALS 173 (339)
T ss_dssp TTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEE
T ss_pred cHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEE
Confidence 3456778877765 89999999999999999999988632 122468899999999999999999943 68999
Q ss_pred EeCCcccccCCCC---------------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCCh---h-hHHHHHHHH
Q 007936 354 VARGDLGAQIPLE---------------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTR---A-EVADVSEAV 414 (584)
Q Consensus 354 IaRGDLg~ei~~e---------------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTr---A-Ev~Dv~nav 414 (584)
+|..||..+++.. .+..+..+++.+|+++|++++.. +.+.- + -..+...+.
T Consensus 174 ~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~----------v~~d~~D~~gl~~~~~~~~ 243 (339)
T 3r4i_A 174 FGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN----------VSTEVRDMSVVANDAARAR 243 (339)
T ss_dssp ECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC----------CCCCSSCHHHHHHHHHHHH
T ss_pred ECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC----------CCcCCCChHHHHHHHHHHH
Confidence 9999999988752 15667889999999999998642 11211 1 123455565
Q ss_pred -HcccceEee
Q 007936 415 -RQRADALML 423 (584)
Q Consensus 415 -~~G~D~imL 423 (584)
..|+|+-+.
T Consensus 244 ~~lGf~Gk~~ 253 (339)
T 3r4i_A 244 NEFGYTRMWS 253 (339)
T ss_dssp HTTCCSEEEE
T ss_pred HhCCCCccee
Confidence 689987554
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.93 E-value=1.3e-09 Score=121.48 Aligned_cols=127 Identities=11% Similarity=0.033 Sum_probs=103.7
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-------h--cCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAA-------R--SRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARG 357 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~-------~--~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRG 357 (584)
..|..+.+.|...|++|||.++++++++++++.+ . ..+.++.+.++||++.|+.|+|+|++++|++.||..
T Consensus 377 rAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtN 456 (572)
T 2wqd_A 377 RALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTN 456 (572)
T ss_dssp HHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECHH
Confidence 5578888899999999999999999998888742 1 123468999999999999999999999999999999
Q ss_pred ccccc-CC---------------CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE
Q 007936 358 DLGAQ-IP---------------LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL 421 (584)
Q Consensus 358 DLg~e-i~---------------~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i 421 (584)
||+.- ++ .+.|..+.++++.+|+++|||++++.++- ..|.-+ ..++..|+|.+
T Consensus 457 DLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~~-----~~l~~lG~~~~ 525 (572)
T 2wqd_A 457 DLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETAI-----PLLLGLGLDEF 525 (572)
T ss_dssp HHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTTH-----HHHHHHTCCEE
T ss_pred HHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHHH-----HHHHHCCCCEE
Confidence 99832 22 13578888999999999999999987632 244444 66788999998
Q ss_pred eec
Q 007936 422 MLS 424 (584)
Q Consensus 422 mLs 424 (584)
..+
T Consensus 526 S~~ 528 (572)
T 2wqd_A 526 SMS 528 (572)
T ss_dssp EEC
T ss_pred Eec
Confidence 776
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.77 E-value=1.6e-08 Score=108.41 Aligned_cols=135 Identities=7% Similarity=-0.021 Sum_probs=104.8
Q ss_pred Ccc-CHhhhHHhHh------cCCCEEEEcCCCCHHHHHHHHHHHHhh--cC---CCCceEEEeecCHHH---HhcHHHHH
Q 007936 282 SPK-DWLDIDFGIT------EGVDFIAISFVKSAEVINHLKSYIAAR--SR---DSDIAVIAKIESIDS---LKNLEEII 346 (584)
Q Consensus 282 t~k-D~~dI~~al~------~gvD~I~lSfV~saedV~~lr~~l~~~--~~---~~~i~IiAKIEt~~a---v~NldeIl 346 (584)
|.+ ...||...+. .++|+|.+|+|++++++..+.+.+... .. ...+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 344 5778888777 789999999999999999998888531 11 225899999999999 99999999
Q ss_pred HhC-------CEEEEeCCcccccCCCC-------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhh-HHHHH
Q 007936 347 LAS-------DGAMVARGDLGAQIPLE-------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAE-VADVS 411 (584)
Q Consensus 347 ~~s-------DGImIaRGDLg~ei~~e-------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAE-v~Dv~ 411 (584)
.++ +|+++|+.||..+++.. .+..+..+++.+|+++|+++|-. +....-..+- ..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg-------V~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG-------PYDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC-------CCCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc-------cccCCCCHHHHHHHHH
Confidence 774 69999999999988763 47888999999999999987642 1111111111 25677
Q ss_pred HHHHcccceEee
Q 007936 412 EAVRQRADALML 423 (584)
Q Consensus 412 nav~~G~D~imL 423 (584)
.+...|+|+-+.
T Consensus 247 ~ar~lGF~GK~~ 258 (433)
T 3oyz_A 247 DNQAKGMLGIWS 258 (433)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHhCCCCceEe
Confidence 788999998766
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.38 E-value=1.6e-06 Score=100.86 Aligned_cols=119 Identities=18% Similarity=0.110 Sum_probs=95.3
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------hcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCccc-ccC
Q 007936 296 GVD---FIAISFVKSAEVINHLKSYIAA--------RSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLG-AQI 363 (584)
Q Consensus 296 gvD---~I~lSfV~saedV~~lr~~l~~--------~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg-~ei 363 (584)
|.+ .|++|||+++++++.+++.+++ .+...+++|+++||++.|+.|+++|++.+|++.||..||. ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999988752 1222368999999999999999999999999999999988 333
Q ss_pred CC----------------------------CChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHH
Q 007936 364 PL----------------------------EQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEA 413 (584)
Q Consensus 364 ~~----------------------------e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~na 413 (584)
+. +.|..+.++++++|+++ ||||.++-|+= ..|.- +...
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~-----~~~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG------GEPSS-----VAFF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG------GSHHH-----HHHH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcC------CCHHH-----HHHH
Confidence 32 35777888999999998 99999987732 12333 3567
Q ss_pred HHcccceEeecC
Q 007936 414 VRQRADALMLSG 425 (584)
Q Consensus 414 v~~G~D~imLs~ 425 (584)
+..|.|.+-.|.
T Consensus 850 ~~~Gl~~vS~sp 861 (876)
T 1vbg_A 850 AKAGLDYVSCSP 861 (876)
T ss_dssp HHTTCSEEEECG
T ss_pred HHcCCCEEEECc
Confidence 889999998773
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.25 E-value=4.5e-06 Score=97.02 Aligned_cols=119 Identities=16% Similarity=0.126 Sum_probs=95.4
Q ss_pred CCC---EEEEcCCCCHHHHHHHHHHHHh--------hcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCccc-ccC
Q 007936 296 GVD---FIAISFVKSAEVINHLKSYIAA--------RSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLG-AQI 363 (584)
Q Consensus 296 gvD---~I~lSfV~saedV~~lr~~l~~--------~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg-~ei 363 (584)
|.+ .|++|||+++++++.+++.+++ .+...+++|.++||++.|+.++++|++.+|++.||..||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 7999999999999999988853 1222368999999999999999999999999999999998 443
Q ss_pred CC----------------------------CChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHH
Q 007936 364 PL----------------------------EQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEA 413 (584)
Q Consensus 364 ~~----------------------------e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~na 413 (584)
+. +-|....+++++.|+++ |+||.++-|+= ..|.- +.-.
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~-----~~~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG------GDPSS-----VEFC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG------GSHHH-----HHHH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCC------CCHHH-----HHHH
Confidence 33 35777888999999998 89999987732 12332 3557
Q ss_pred HHcccceEeecC
Q 007936 414 VRQRADALMLSG 425 (584)
Q Consensus 414 v~~G~D~imLs~ 425 (584)
+..|.|.+-.|.
T Consensus 844 ~~~Gl~~vS~sp 855 (873)
T 1kbl_A 844 HKVGLNYVSCSP 855 (873)
T ss_dssp HHTTCSEEEECG
T ss_pred HHcCCCEEEECh
Confidence 889999987773
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.79 E-value=0.00013 Score=80.45 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=93.1
Q ss_pred HhhhHHhHhcC-CCEEEEcCCCCHHHHHHHHHHHHh----hcC-CCCceEEEeecCHHHHhcHHHHHHh-C---CEEEEe
Q 007936 286 WLDIDFGITEG-VDFIAISFVKSAEVINHLKSYIAA----RSR-DSDIAVIAKIESIDSLKNLEEIILA-S---DGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~g-vD~I~lSfV~saedV~~lr~~l~~----~~~-~~~i~IiAKIEt~~av~NldeIl~~-s---DGImIa 355 (584)
..|++..+..| .+||.+|++++++++..+.+.+.. .+. ...+++++.|||..|+-|++||+.. . .|+..|
T Consensus 195 ~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G 274 (532)
T 3cuz_A 195 FHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCG 274 (532)
T ss_dssp HHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECC
T ss_pred HHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcC
Confidence 45555555543 499999999999999999888742 112 1358999999999999999999976 4 499999
Q ss_pred CCcccccCCC-------------------CChHHHHHHH-HHHHHHcCCCeEE--ehhhhHhhhcCCCCCh--h----hH
Q 007936 356 RGDLGAQIPL-------------------EQVPSAQQKI-VQLCRQLNKPVIV--ASQLLESMIEYPTPTR--A----EV 407 (584)
Q Consensus 356 RGDLg~ei~~-------------------e~V~~~Qk~I-I~~c~~~gKPviv--ATqmLeSMi~~p~PTr--A----Ev 407 (584)
+.|+..++.- ..+..+..++ +..|+++|++.|- +-+ + ....|.. + =.
T Consensus 275 ~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~-~----p~kD~e~~~~~~~~l~ 349 (532)
T 3cuz_A 275 RWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAF-I----PSKDEEHNNQVLNKVK 349 (532)
T ss_dssp SHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECB-C----CCSSGGGCHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCcccc-C----CCCChhHHHHHHHHHH
Confidence 9998876610 1134444444 4999999998876 311 1 0011111 0 12
Q ss_pred HHHHHHHHcccceEeec
Q 007936 408 ADVSEAVRQRADALMLS 424 (584)
Q Consensus 408 ~Dv~nav~~G~D~imLs 424 (584)
.|...+..+|+||-+.-
T Consensus 350 ~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 350 ADKSLEANNGHDGTWIA 366 (532)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHCCCCccccC
Confidence 56667888999998874
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.63 E-value=0.0003 Score=77.47 Aligned_cols=127 Identities=18% Similarity=0.204 Sum_probs=89.4
Q ss_pred hcCCCEEEEcCCCCHHHHHHHHHHHHh----hcC-CCCceEEEeecCHHHHhcHHHHHHh----CCEEEEeCCcccccCC
Q 007936 294 TEGVDFIAISFVKSAEVINHLKSYIAA----RSR-DSDIAVIAKIESIDSLKNLEEIILA----SDGAMVARGDLGAQIP 364 (584)
Q Consensus 294 ~~gvD~I~lSfV~saedV~~lr~~l~~----~~~-~~~i~IiAKIEt~~av~NldeIl~~----sDGImIaRGDLg~ei~ 364 (584)
..|+ ||.+|++++++|+..+.+.+.. .+. ...+++.+.|||..|+-|++||+.. +.|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 4576 9999999999999999888853 111 2359999999999999999999966 3499999999877653
Q ss_pred C------C--------------ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcC-CCCC--h----hhHHHHHHHHHcc
Q 007936 365 L------E--------------QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEY-PTPT--R----AEVADVSEAVRQR 417 (584)
Q Consensus 365 ~------e--------------~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~-p~PT--r----AEv~Dv~nav~~G 417 (584)
. + -+..+++.++..|+++|++.|-. |- .++-. ..|. . .=..|-.....+|
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~ip~~~D~~~n~~~~~~~~~dk~~~~~~G 357 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQIPIKNNPEANEAAFEKVRADKEREALDG 357 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC----------------------CHHHHHHHHHHHHT
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-ccCcCcCChHHHHHHHHHHHHHHHHHHhCC
Confidence 1 0 24556677889999999998752 11 12100 0111 0 1125667788999
Q ss_pred cceEeec
Q 007936 418 ADALMLS 424 (584)
Q Consensus 418 ~D~imLs 424 (584)
+||-+.-
T Consensus 358 fdGkwvi 364 (528)
T 3cux_A 358 HDGTWVA 364 (528)
T ss_dssp CSBEEES
T ss_pred CCccccc
Confidence 9998885
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.48 E-value=0.00017 Score=81.14 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=93.5
Q ss_pred HhhhHHhHhc--CCCEEEEcCCCCHHHHHHHHHHHHh----hcC-CCCceEEEeecCHHHHhcHHHHHH-hC---CEEEE
Q 007936 286 WLDIDFGITE--GVDFIAISFVKSAEVINHLKSYIAA----RSR-DSDIAVIAKIESIDSLKNLEEIIL-AS---DGAMV 354 (584)
Q Consensus 286 ~~dI~~al~~--gvD~I~lSfV~saedV~~lr~~l~~----~~~-~~~i~IiAKIEt~~av~NldeIl~-~s---DGImI 354 (584)
..|++..+.. |.++|.+|++++++|+..+.+++.. .+. ...+++.++|||+.|+-|++||+. .. -|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 3455544433 5899999999999999999988752 111 135899999999999999999985 33 49999
Q ss_pred eCCcccccC-CC---------------CC-hHHHHHHHHH---HHHHcCCCeEEehhhhHhhhcCCCCChhh--HHHHHH
Q 007936 355 ARGDLGAQI-PL---------------EQ-VPSAQQKIVQ---LCRQLNKPVIVASQLLESMIEYPTPTRAE--VADVSE 412 (584)
Q Consensus 355 aRGDLg~ei-~~---------------e~-V~~~Qk~II~---~c~~~gKPvivATqmLeSMi~~p~PTrAE--v~Dv~n 412 (584)
|+.|+..++ .. .. +..+++..+. +|+++|++.|-- -|-.. |..-| ..|-..
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~--p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAM--PDLMADMYSQKGD 524 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCC--TTCHHHHHHHTHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccC--hhhHHHHHHHHHH
Confidence 999988774 21 11 2234455565 899999998761 12222 33322 356667
Q ss_pred HHHcccceEeec
Q 007936 413 AVRQRADALMLS 424 (584)
Q Consensus 413 av~~G~D~imLs 424 (584)
...+|+||-++-
T Consensus 525 ~~~~GfdGkwVi 536 (731)
T 1p7t_A 525 QLRAGANTAWVP 536 (731)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhCCCCCcccC
Confidence 889999998885
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.34 E-value=0.0011 Score=77.51 Aligned_cols=138 Identities=16% Similarity=0.099 Sum_probs=103.1
Q ss_pred cCCCCCccCHhhhHHhHh----cCCC---EEEEcCCCCHHHHHHHHHHHHh--------hcCCCCceEEEeecCHHHHhc
Q 007936 277 MLPTISPKDWLDIDFGIT----EGVD---FIAISFVKSAEVINHLKSYIAA--------RSRDSDIAVIAKIESIDSLKN 341 (584)
Q Consensus 277 ~lp~lt~kD~~dI~~al~----~gvD---~I~lSfV~saedV~~lr~~l~~--------~~~~~~i~IiAKIEt~~av~N 341 (584)
..|.+-+-..+.|..|.. .|.+ .|++|||.+.++++.+++.+.. .+...++++..+||++.|.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 344444545555655432 3755 7999999999999999998742 123346899999999999999
Q ss_pred HHHHHHhCCEEEEeCCccc-----ccC-------------------CC-----CChHHHHHHHHHHHHH--cCCCeEEeh
Q 007936 342 LEEIILASDGAMVARGDLG-----AQI-------------------PL-----EQVPSAQQKIVQLCRQ--LNKPVIVAS 390 (584)
Q Consensus 342 ldeIl~~sDGImIaRGDLg-----~ei-------------------~~-----e~V~~~Qk~II~~c~~--~gKPvivAT 390 (584)
.|+|++.+|++=||-.||. ++= |+ +-|....+..++.|++ .|+||.++-
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 9999999999999999964 221 11 4567788889999997 699999998
Q ss_pred hhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 391 QLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 391 qmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
|+= ..|.- +.-.+..|.|.+-.|.
T Consensus 858 E~~------gdP~~-----~~~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 858 EHG------GDPAT-----IGFCHKVGLDYVSCSP 881 (913)
T ss_dssp GGG------GCHHH-----HHHHHHHTCSEEEECG
T ss_pred CCC------CCHHH-----HHHHHHcCCCEEEECc
Confidence 753 12333 3567889999998883
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.40 E-value=0.024 Score=66.51 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=86.4
Q ss_pred EEEEcCCCCHHHHHHHHHHHHh--------hcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCccc-----ccC--
Q 007936 299 FIAISFVKSAEVINHLKSYIAA--------RSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLG-----AQI-- 363 (584)
Q Consensus 299 ~I~lSfV~saedV~~lr~~l~~--------~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg-----~ei-- 363 (584)
.|++|||++.++++.+++.+.. ...+.+++|-.+||+|.+.-..|+|++.+|++=||-.||. ++=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 5999999999999998877642 2233468899999999999999999999999999999973 222
Q ss_pred -----------------CC-----CChHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccc
Q 007936 364 -----------------PL-----EQVPSAQQKIVQLCRQLN--KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRAD 419 (584)
Q Consensus 364 -----------------~~-----e~V~~~Qk~II~~c~~~g--KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D 419 (584)
|+ +-|..+.+..++.|++.+ .||.++-||= ..|.- +.-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~------gdP~~-----~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG------GDPAT-----IGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG------GCHHH-----HHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc------cCHHH-----HHHHHHcCCC
Confidence 11 135555566666777665 5899998742 12333 3668889999
Q ss_pred eEeec
Q 007936 420 ALMLS 424 (584)
Q Consensus 420 ~imLs 424 (584)
.+-+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99888
No 33
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.96 E-value=0.3 Score=46.30 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=85.2
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCH-HHHhcHHHHHHh-CCEEEEeCCcccccCCC
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESI-DSLKNLEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~-~av~NldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
.++.+.+.|+|+|.++-.-..+++.++.+.++.. + ..++.-+-++ ..++.+..+.+. +|.|.+.+|-=|...+.
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~--g--~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~ 144 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA--G--KQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGR 144 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--T--CEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc--C--CeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCC
Confidence 3788899999999998776667888888888532 3 3444322111 124556777777 89998877632322332
Q ss_pred CChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHH
Q 007936 366 EQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~ 444 (584)
..+ +.+-+..... +.|+++.- .. + ..++..++..|+|++....--..+..|.++++.+.+..
T Consensus 145 ~~~----~~i~~l~~~~~~~~i~~~g---------GI-~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~ 207 (211)
T 3f4w_A 145 KPI----DDLITMLKVRRKARIAVAG---------GI-S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVL 207 (211)
T ss_dssp CSH----HHHHHHHHHCSSCEEEEES---------SC-C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHH
T ss_pred CCH----HHHHHHHHHcCCCcEEEEC---------CC-C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHH
Confidence 221 1122222232 67777652 22 2 13667788889999998765555678998888776654
Q ss_pred H
Q 007936 445 L 445 (584)
Q Consensus 445 ~ 445 (584)
+
T Consensus 208 ~ 208 (211)
T 3f4w_A 208 L 208 (211)
T ss_dssp H
T ss_pred h
Confidence 3
No 34
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.91 E-value=0.77 Score=50.78 Aligned_cols=125 Identities=18% Similarity=0.249 Sum_probs=82.4
Q ss_pred CccCHhhhHHhHhcCCCEEEEc--CCCCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHhCCEEEEeCCc
Q 007936 282 SPKDWLDIDFGITEGVDFIAIS--FVKSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILASDGAMVARGD 358 (584)
Q Consensus 282 t~kD~~dI~~al~~gvD~I~lS--fV~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~sDGImIaRGD 358 (584)
.+.+++-+...++.|+|+|++- .-.+.. +.+..+.++.. -.++.||| -+-|.++.++|-+ .-+|+|-||-|-
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs~~-v~~~i~~ik~~--~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGp 353 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNSVY-QIEFIKWIKQT--YPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGS 353 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCSHH-HHHHHHHHHHH--CTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSC
T ss_pred CccHHHHHHHHHhcCCcEEEEeccccccHH-HHHHHHHHHhh--CCcceEEeccccCHHHHHHHHH--cCCCEEeecCCC
Confidence 4556666777789999998873 333444 44444455422 23466665 8999999877643 348999998775
Q ss_pred ccc-------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 359 LGA-------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 359 Lg~-------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
=++ -++.+. ..+.....+.|+++|+|||---- .- --.|++.|+..|||++||.
T Consensus 354 GSiCtTr~v~GvG~PQ-~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 354 GSICITQEVMAVGRPQ-GTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp STTBCCTTTCCSCCCH-HHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred CcccccccccCCCCcH-HHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 222 122233 23445567788899999985321 11 2489999999999999995
No 35
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.69 E-value=1.2 Score=46.79 Aligned_cols=124 Identities=19% Similarity=0.315 Sum_probs=77.9
Q ss_pred ccCHhhhHHhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHhCCEEEEe--CC
Q 007936 283 PKDWLDIDFGITEGVDFIAI--SFVKSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILASDGAMVA--RG 357 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~l--SfV~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~sDGImIa--RG 357 (584)
+.+.+.++.+++.|+|+|.+ ++-.+...+..++.+-+ .. .++.|++ .+-|.+....+.+ .=+|+|.+| +|
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~--~~-p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpG 181 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA--AY-PHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPG 181 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH--HC-TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH--hc-CCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCC
Confidence 34677888899999999987 55555555444444432 11 2467766 5878776655443 238999995 22
Q ss_pred ccc-c----cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 358 DLG-A----QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 358 DLg-~----ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
--. . ..+.+.+ .+-..+.+.|+..++|||.+--+ - .-.|+..++..|+|++|+.
T Consensus 182 s~~~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~GGI---------~---~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 182 SICTTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGI---------R---FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TTBCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCC---------C---SHHHHHHHHHTTCSEEEES
T ss_pred CCCCcccccCcccchH-HHHHHHHHHHhhcCCeEEEeCCC---------C---CHHHHHHHHHcCCCEEEEC
Confidence 110 0 1122222 33445666677789999975322 1 2357899999999999985
No 36
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=93.59 E-value=0.11 Score=57.19 Aligned_cols=95 Identities=14% Similarity=0.247 Sum_probs=77.5
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHHHh------hcCC-----CCceEEEeecCHHHHhcHHHHHHh--C-----------C
Q 007936 295 EGVDFIAISFVKSAEVINHLKSYIAA------RSRD-----SDIAVIAKIESIDSLKNLEEIILA--S-----------D 350 (584)
Q Consensus 295 ~gvD~I~lSfV~saedV~~lr~~l~~------~~~~-----~~i~IiAKIEt~~av~NldeIl~~--s-----------D 350 (584)
..+-.+++||.++++|+.++-.+++. ++.+ ..+.||.-+||.+.+.|.++|++. . =
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45667999999999999999888742 1111 257899999999999999999876 1 2
Q ss_pred EEEEeCCcccccCCCC----ChHHHHHHHHHHHHHcCCCeEEe
Q 007936 351 GAMVARGDLGAQIPLE----QVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 351 GImIaRGDLg~ei~~e----~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-||+|+.|=+.+-|+- .+..+|.++.+.|+++|.++-..
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lF 260 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPI 260 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 7999999988777762 68899999999999999997653
No 37
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.56 E-value=0.6 Score=49.83 Aligned_cols=119 Identities=21% Similarity=0.322 Sum_probs=73.8
Q ss_pred HhhhHHhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEeCC--cc
Q 007936 286 WLDIDFGITEGVDFIAI--SFVKSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVARG--DL 359 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~l--SfV~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIaRG--DL 359 (584)
.+.++..++.|+|+|.+ ++-.+....+.++.+- ... .++|++ .+-|.+..+. +.+. +|+|.++-| ..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik--~~~--~i~Vi~g~V~t~e~A~~---a~~aGAD~I~vG~g~Gs~ 218 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIK--SKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSI 218 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHH--TTC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECC-----
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHH--hcC--CCeEEEeecCCHHHHHH---HHHcCCCEEEEeCCCCcC
Confidence 67788899999999987 6665544344444433 111 478886 5766655543 3344 899999532 21
Q ss_pred ccc-----CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 360 GAQ-----IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 360 g~e-----i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
... .+.+ -..+-..+.+.|++.++|||-+.-+- ...|+..++..|+|++|+.
T Consensus 219 ~~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 219 CTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp ----CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred cccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 110 1111 22344566666667799999764322 3468899999999999984
No 38
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=93.44 E-value=0.18 Score=59.28 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=82.9
Q ss_pred HHhHhcC---CCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--C-C----------EEE
Q 007936 290 DFGITEG---VDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--S-D----------GAM 353 (584)
Q Consensus 290 ~~al~~g---vD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--s-D----------GIm 353 (584)
..+.+.| +...++|+.+++.||.++--+.+.-+....+.|+.-.||.+.++|..+|++. . + -||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 3344455 4468999999999999999988643333468999999999999999999977 2 1 699
Q ss_pred EeCCcccccCCCC----ChHHHHHHHHHHHHHcCCCeEEe
Q 007936 354 VARGDLGAQIPLE----QVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 354 IaRGDLg~ei~~e----~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+|..|=+-+-|.- .+..+|+++.+.|+++|+++.+.
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 638 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLF 638 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEe
Confidence 9999988888873 78899999999999999998764
No 39
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=92.85 E-value=0.26 Score=47.79 Aligned_cols=98 Identities=21% Similarity=0.243 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcC------------chhhhcccccccccEEEEecC
Q 007936 474 SEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTS------------TTSVRRRLNLRWGLIPFRLSF 541 (584)
Q Consensus 474 ~~~ia~sav~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~------------~~~~aR~l~l~~GV~P~~~~~ 541 (584)
.+.....|++.|.+++.+-|||.|.+|.||.++...-.. -|++||. ++.+.+.| --.|+.-+...-
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~tH 113 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDAL-LERGVNVYAGSH 113 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHH-HHHTCEEECCSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEeec
Confidence 577788899999999999999999999999998886655 8999995 24444444 223333221110
Q ss_pred C--------------CCHHHHHHHH--------------HHHHHHcCCCCCCCEEEEEec
Q 007936 542 S--------------DDMESNLNRT--------------FSLLKARGMIKSGDLVIAVSD 573 (584)
Q Consensus 542 ~--------------~d~~~~i~~~--------------~~~~k~~g~i~~GD~Vvvv~g 573 (584)
. -..-+.+..+ .-.+.+.|++..|+.||.+.|
T Consensus 114 ~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGG 173 (206)
T 1t57_A 114 ALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGG 173 (206)
T ss_dssp TTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEEC
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEcc
Confidence 0 0122222211 124668999999999999987
No 40
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.50 E-value=1.6 Score=45.70 Aligned_cols=119 Identities=23% Similarity=0.337 Sum_probs=73.0
Q ss_pred HhhhHHhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEe--CCcc
Q 007936 286 WLDIDFGITEGVDFIAI--SFVKSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVA--RGDL 359 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~l--SfV~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIa--RGDL 359 (584)
.+.++.+++.|+|+|.+ ++-.+...+..++++.+ .. ++.|++ .+-|.+..+.+ .+. +|+|.++ +|..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~--~~--~~~Vivg~v~t~e~A~~l---~~aGaD~I~VG~~~Gs~ 179 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS--KM--NIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGSI 179 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH--HC--CCEEEEEEECSHHHHHHH---HHTTCSEEEECSSCCTT
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH--hc--CCcEEEccCCCHHHHHHH---HHcCcCEEEEecCCCcC
Confidence 66778889999999987 44334333333333321 12 467776 77777665443 344 8999996 3321
Q ss_pred cc-----cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 360 GA-----QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 360 g~-----ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.. ..+.+. ...-..+.+.+++.+.|||.+-- .- ...|+..++..|+|++|+.
T Consensus 180 ~~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GG---------I~---~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 180 CTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGG---------IR---YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp CCHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESC---------CC---SHHHHHHHHHHTCSEEEES
T ss_pred CCcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECC---------CC---CHHHHHHHHHcCCCEEEEC
Confidence 10 011222 23445566667778999997632 22 2367889999999999985
No 41
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.38 E-value=0.16 Score=59.19 Aligned_cols=95 Identities=15% Similarity=0.225 Sum_probs=80.1
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh---CC----------EEEEeCCcccc
Q 007936 295 EGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA---SD----------GAMVARGDLGA 361 (584)
Q Consensus 295 ~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~---sD----------GImIaRGDLg~ 361 (584)
..+...++|+.+++.||.++--+.+..+....+.|+.-.||.+.++|..+|++. .+ -||+|..|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 346678999999999999999888543333468999999999999999999976 11 69999999877
Q ss_pred cCCCC----ChHHHHHHHHHHHHHcCCCeEEe
Q 007936 362 QIPLE----QVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 362 ei~~e----~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+-|.- .+..+|+++.+.|+++|+++.+.
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 578 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLF 578 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 77763 78899999999999999998764
No 42
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.15 E-value=0.82 Score=49.80 Aligned_cols=123 Identities=20% Similarity=0.225 Sum_probs=75.8
Q ss_pred ccCHhhhHHhHhcCCCEEEEc--CCCCHHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEeCCc
Q 007936 283 PKDWLDIDFGITEGVDFIAIS--FVKSAEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVARGD 358 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lS--fV~saedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIaRGD 358 (584)
..+.+.++..++.|+|+|.+- .-.+...++.++.+- .. . .++.|++. +-|.+..+. ..++ +|+|.+|-|.
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~-~~-~-p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~vg~g~ 301 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVK-QT-F-PDVQVIGGNIATAEAAKA---LAEAGADAVKVGIGP 301 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHH-HH-C-TTSEEEEEEECSHHHHHH---HHHTTCSEEEECSSC
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHH-HH-C-CCceEEEeeeCcHHHHHH---HHHcCCCEEEECCCC
Confidence 455777888899999999863 333443333333322 11 1 24677776 777766544 3334 8999996433
Q ss_pred ccc-------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 359 LGA-------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 359 Lg~-------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
=+. ..+.+. ..+-.++.+.|++.++|+|.+.-+ - -..|+..|+..|||++|+.
T Consensus 302 Gs~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI---------~---~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIADGGI---------R---FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp STTCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEESCC---------C---SHHHHHHHHHHTCSEEEEC
T ss_pred CcCCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEeCCC---------C---CHHHHHHHHHcCCCeeeec
Confidence 111 122222 234456677777779999976432 2 2468888999999999995
No 43
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=91.91 E-value=1.9 Score=46.84 Aligned_cols=121 Identities=23% Similarity=0.324 Sum_probs=75.5
Q ss_pred cCHhhhHHhHhcCCCEEEE--cCCCCH---HHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHhCCEEEEeC-
Q 007936 284 KDWLDIDFGITEGVDFIAI--SFVKSA---EVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILASDGAMVAR- 356 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~l--SfV~sa---edV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~sDGImIaR- 356 (584)
...+.++.+++.|+|+|.+ ++-... +.++++++.+ .++.|+++ +.|.+....+.+. =+|+|.++-
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~------~~~pvi~~~v~t~~~a~~l~~a--Gad~I~vg~~ 326 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY------PHLQVIGGNVVTAAQAKNLIDA--GVDGLRVGMG 326 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC------TTCEEEEEEECSHHHHHHHHHH--TCSEEEECSS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC------CCCceEecccchHHHHHHHHHc--CCCEEEECCC
Confidence 3467778889999999998 433332 3333333322 24788875 8777665544431 289999954
Q ss_pred -Cccccc-----CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 357 -GDLGAQ-----IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 357 -GDLg~e-----i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
|--... .+.+ .+.....+-+.+++.+.|||.+.-+- ...|+..++..|||++++..
T Consensus 327 ~G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 327 CGSICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CSCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CCcccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 311000 1111 24445566667777799999763321 34688999999999999964
No 44
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.68 E-value=1.4 Score=48.24 Aligned_cols=125 Identities=19% Similarity=0.214 Sum_probs=76.9
Q ss_pred ccCHhhhHHhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHhCCEEEEeCCccc
Q 007936 283 PKDWLDIDFGITEGVDFIAISFVK-SAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILASDGAMVARGDLG 360 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~sDGImIaRGDLg 360 (584)
+.+.+.++..++.|+|.|.+.... ..+.+.++.+.++.. . .++.|++ -+-|.+....+.+ .-+|+|.+|-|-=+
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~-~-~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gs 330 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK-Y-PSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGS 330 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-C-TTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh-C-CCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCcc
Confidence 344677788899999999986443 223333333333222 1 2355655 6777666544332 13899998654311
Q ss_pred c-------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 361 A-------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 361 ~-------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
. ..+.+. ..+-..+.+.|++.++|||.+.-+- -..|++.|+..|||++|+.
T Consensus 331 i~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 331 ICTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp TCCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheec
Confidence 1 112222 2344567778888899999764322 3478899999999999995
No 45
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.64 E-value=1.4 Score=42.56 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=82.4
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH---hCCEEEEeCCccc--
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL---ASDGAMVARGDLG-- 360 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~---~sDGImIaRGDLg-- 360 (584)
.+.++.+.+.|+|+|.+..-.+.+.+.++.+.++ +.+ ..++.-+....-++.+++++. .+|.+.+..-.-|
T Consensus 77 ~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~--~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~ 152 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIK--AKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFG 152 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHH--HTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCS
T ss_pred HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHH--HcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCC
Confidence 3457788899999999998776655234444442 223 456666633334566888888 7999998543222
Q ss_pred -ccCCCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHH
Q 007936 361 -AQIPLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALT 438 (584)
Q Consensus 361 -~ei~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~ 438 (584)
-..+...+ +++-+..+.. +.|+.++-- -.|. .+..++..|+|++....---....|.++++
T Consensus 153 g~~~~~~~l----~~i~~~~~~~~~~pi~v~GG--------I~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~ 215 (228)
T 1h1y_A 153 GQKFMPEMM----EKVRALRKKYPSLDIEVDGG--------LGPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVIS 215 (228)
T ss_dssp SCCCCGGGH----HHHHHHHHHCTTSEEEEESS--------CSTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHH
T ss_pred cccCCHHHH----HHHHHHHHhcCCCCEEEECC--------cCHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHH
Confidence 22222222 2222222333 788887632 1232 334555569999998744333457999999
Q ss_pred HHHHHHH
Q 007936 439 VLRSVSL 445 (584)
Q Consensus 439 ~m~~I~~ 445 (584)
.|++.+.
T Consensus 216 ~l~~~~~ 222 (228)
T 1h1y_A 216 ALRKSVE 222 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877543
No 46
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=91.58 E-value=0.65 Score=46.33 Aligned_cols=140 Identities=11% Similarity=0.082 Sum_probs=84.9
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCc--ccccCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGD--LGAQIP 364 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGD--Lg~ei~ 364 (584)
..++...+.|+|+|.+..- ..+++.++.+.+ ++.|....+...=.| -++.+++++...|.|++-.-+ +|-+-=
T Consensus 100 ~~i~~~~~aGAd~itvH~E-a~~~~~~~i~~i--r~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~f 174 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPE-ASEHIDRSLQLI--KSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKF 174 (246)
T ss_dssp HHHHHHHHHTCSEEEECGG-GCSCHHHHHHHH--HTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCC
T ss_pred HHHHHHHHcCCCEEEEccc-cchhHHHHHHHH--HHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCccc
Confidence 3567788999999999854 335677777777 344544444433344 557788999899988874322 332221
Q ss_pred CCChHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHH
Q 007936 365 LEQVPSAQQKIVQLCRQLN--KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRS 442 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~g--KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~ 442 (584)
.+....--+++-+.+.+.| .++-+.- .-.|.. +..++..|+|.+....--....-|.++++.|++
T Consensus 175 i~~~l~KI~~lr~~~~~~~~~~~I~VDG--------GI~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 175 IPAMLDKAKEISKWISSTDRDILLEIDG--------GVNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp CTTHHHHHHHHHHHHHHHTSCCEEEEES--------SCCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhcCCCeeEEEEC--------CcCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 2344344445555555555 3444432 123333 477888999999886432334678899888876
Q ss_pred HH
Q 007936 443 VS 444 (584)
Q Consensus 443 I~ 444 (584)
..
T Consensus 242 ~i 243 (246)
T 3inp_A 242 EL 243 (246)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 47
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.53 E-value=3 Score=45.39 Aligned_cols=124 Identities=19% Similarity=0.263 Sum_probs=77.8
Q ss_pred CccCHhhhHHhHhcCCCEEEEcCCC--CHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 282 SPKDWLDIDFGITEGVDFIAISFVK--SAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 282 t~kD~~dI~~al~~gvD~I~lSfV~--saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIaRG 357 (584)
.+.+.+.++..++.|+|.|.+-... +...+..++++- .. . .++.|++ .+-|.+..+.+ .++ +|+|.++=|
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir-~~-~-p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~Vg~g 302 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AA-Y-PHLEIIGGNVATAEGARAL---IEAGVSAVKVGIG 302 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HH-C-TTCCEEEEEECSHHHHHHH---HHHTCSEEEECSS
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHH-HH-C-CCceEEEcccCcHHHHHHH---HHhCCCEEEECCC
Confidence 3566888888899999999885443 332233333322 11 1 2456666 47787765444 334 899998643
Q ss_pred ccccc-------CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 358 DLGAQ-------IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 358 DLg~e-------i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.=+.. .+.+ -..+-.++.+.|++.++|+|.+.-+ - -..|+..|+..|||++|+.
T Consensus 303 ~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI---------~---~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 303 PGSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGI---------R---FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp CCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCC---------C---SHHHHHHHHHTTCSEEEES
T ss_pred CCcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCC---------C---CHHHHHHHHHcCCCeEEec
Confidence 21111 1122 2344467778888889999976432 2 3468889999999999995
No 48
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.41 E-value=0.68 Score=46.74 Aligned_cols=154 Identities=14% Similarity=0.080 Sum_probs=93.5
Q ss_pred CCccCHhhhHH-hHhcCCCEEEEcCCCCHH------HHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEE
Q 007936 281 ISPKDWLDIDF-GITEGVDFIAISFVKSAE------VINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGA 352 (584)
Q Consensus 281 lt~kD~~dI~~-al~~gvD~I~lSfV~sae------dV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGI 352 (584)
++..++..|.. ..+.|++.|-+.+-.+.+ +..++.+.+. .. .++++.+.+-+ .+.++..++. .|.|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~--~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V 96 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIR--RA-DGVRYSVLVPN---MKGYEAAAAAHADEI 96 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSC--CC-SSSEEEEECSS---HHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHH--hC-CCCEEEEEeCC---HHHHHHHHHCCCCEE
Confidence 56666666554 456899999885422333 3444444442 21 35677666633 2334444444 6888
Q ss_pred EEeCCcccc---------cCCCCChHHHHHHHHHHHHHcCCCeE--EehhhhHhhhcCCCCChhhHHHHHH-HHHcccce
Q 007936 353 MVARGDLGA---------QIPLEQVPSAQQKIVQLCRQLNKPVI--VASQLLESMIEYPTPTRAEVADVSE-AVRQRADA 420 (584)
Q Consensus 353 mIaRGDLg~---------ei~~e~V~~~Qk~II~~c~~~gKPvi--vATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~ 420 (584)
+|. ++. ..+.++....-+.+++.|+++|+.|- +.+- + +.....+-+..++.+++. +...|+|.
T Consensus 97 ~i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~-~-~~e~~~~~~~~~~~~~~~~~~~~G~d~ 171 (295)
T 1ydn_A 97 AVF---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCV-V-ECPYDGPVTPQAVASVTEQLFSLGCHE 171 (295)
T ss_dssp EEE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECS-S-EETTTEECCHHHHHHHHHHHHHHTCSE
T ss_pred EEE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEE-e-cCCcCCCCCHHHHHHHHHHHHhcCCCE
Confidence 873 222 35667777888899999999999986 3221 0 000011234455666665 55789999
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHH
Q 007936 421 LMLSGESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 421 imLs~ETa~G~yPveaV~~m~~I~~~ 446 (584)
+.|. +|.=...|.+.-+.++.+...
T Consensus 172 i~l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 172 VSLG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EEEE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred EEec-CCCCCcCHHHHHHHHHHHHHh
Confidence 9998 454446799888888777543
No 49
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=91.39 E-value=0.65 Score=44.90 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcC------------chhhhcccccccccEEEEec-
Q 007936 474 SEEICNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTS------------TTSVRRRLNLRWGLIPFRLS- 540 (584)
Q Consensus 474 ~~~ia~sav~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~------------~~~~aR~l~l~~GV~P~~~~- 540 (584)
.+.....|++.|.+++.+-|||.|.+|.||.++...-...-+++||. ++.+.+.| --.|+.-+...
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~tH 106 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL-RKRGAKIVRQSH 106 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH-HHTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEEec
Confidence 57778889999999999999999999999999888777789999995 34555544 23444433221
Q ss_pred -----------CC--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEec
Q 007936 541 -----------FS--DDMESNLNRTFS---------------LLKARGMIKSGDLVIAVSD 573 (584)
Q Consensus 541 -----------~~--~d~~~~i~~~~~---------------~~k~~g~i~~GD~Vvvv~g 573 (584)
.. -..-+.+..++. .+...|++.. +.||.+.|
T Consensus 107 ~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGG 166 (201)
T 1vp8_A 107 ILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGG 166 (201)
T ss_dssp TTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEEC
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEcc
Confidence 00 123334444443 4568899999 88999877
No 50
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.00 E-value=1.8 Score=44.32 Aligned_cols=111 Identities=17% Similarity=0.249 Sum_probs=68.8
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEE-eCCcccccCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMV-ARGDLGAQIP 364 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImI-aRGDLg~ei~ 364 (584)
+.++.+++.|+|+|.+++=...+.++.+++ . .++++.++.+.+-... +.+. +|+|.+ ++ +-|-..+
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~------~--g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g 146 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE------A--GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIG 146 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH------T--TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECC
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH------c--CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCC
Confidence 457788899999999998655554444442 1 4789999988765443 3334 899999 43 2222222
Q ss_pred CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 365 LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
...-...-++ .....++|||.+.-+ -+. .|+..++..|+|++++.
T Consensus 147 ~~~~~~ll~~---i~~~~~iPViaaGGI---------~~~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 147 KLTTMTLVRQ---VATAISIPVIAAGGI---------ADG---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp SSCHHHHHHH---HHHHCSSCEEEESSC---------CSH---HHHHHHHHTTCSEEEEC
T ss_pred CccHHHHHHH---HHHhcCCCEEEECCC---------CCH---HHHHHHHHcCCCEEEec
Confidence 1111122222 223458999988432 222 46677888999999985
No 51
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=90.82 E-value=1.9 Score=45.33 Aligned_cols=117 Identities=15% Similarity=0.304 Sum_probs=70.4
Q ss_pred ccCHhhhHHhHhcCCCEEEE--cCCCCH---HHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 283 PKDWLDIDFGITEGVDFIAI--SFVKSA---EVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~l--SfV~sa---edV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIa 355 (584)
+.+.+.++.+++.|+|+|.+ +.-.+. +.|+.+|+.. .++.|+++ +-|++....+ .+. +|+|.|+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~------~~~~Vi~G~V~T~e~A~~a---~~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL------GSRCIMAGNVATYAGADYL---ASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH------TTCEEEEEEECSHHHHHHH---HHTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc------CCCeEEEcCcCCHHHHHHH---HHcCCCEEEEc
Confidence 34567788899999999988 332332 2344444432 24789996 8887665433 334 8999995
Q ss_pred CCcccccC------CCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 356 RGDLGAQI------PLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 356 RGDLg~ei------~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
-|- |-.+ ++ .+| |-..+..|.+..+|||..--+ - .-.|+..|+..|||++|+.
T Consensus 170 ~g~-G~~~~tr~~~g~-g~p--~l~aI~~~~~~~~PVIAdGGI---------~---~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 170 IGG-GSVCSTRIKTGF-GVP--MLTCIQDCSRADRSIVADGGI---------K---TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp CSS-SSCHHHHHHHCC-CCC--HHHHHHHHTTSSSEEEEESCC---------C---SHHHHHHHHHTTCSEEEES
T ss_pred CCC-CcCccccccCCc-cHH--HHHHHHHHHHhCCCEEEECCC---------C---CHHHHHHHHHcCCCEEEEC
Confidence 221 1000 00 112 334455555554588865322 1 3468899999999999994
No 52
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=90.63 E-value=0.95 Score=44.37 Aligned_cols=141 Identities=15% Similarity=0.127 Sum_probs=81.8
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLE 366 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e 366 (584)
..++.+.+.|+|+|.+.. +..+++.++.+.++ +.|..+.+. |-....++.+++++...|.|++-.-+-|.. |..
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~--~~G~k~gva--l~p~t~~e~l~~~l~~~D~Vl~msv~pGf~-Gq~ 151 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EATENPGALIKDIR--ENGMKVGLA--IKPGTSVEYLAPWANQIDMALVMTVEPGFG-GQK 151 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHH--HTTCEEEEE--ECTTSCGGGTGGGGGGCSEEEEESSCTTTC-SCC
T ss_pred HHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHH--HcCCCEEEE--EcCCCCHHHHHHHhccCCeEEEeeecCCCC-Ccc
Confidence 346777899999999975 54456666666663 334434443 433334678889998899988732221110 111
Q ss_pred ChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHH
Q 007936 367 QVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 367 ~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~ 444 (584)
-.+..-++| +..++. +.|+.+.-- -.| ..+..++..|+|.+....--.....|.++++.|++.+
T Consensus 152 f~~~~l~ki-~~lr~~~~~~~I~VdGG--------I~~-----~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~ 217 (228)
T 3ovp_A 152 FMEDMMPKV-HWLRTQFPSLDIEVDGG--------VGP-----DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217 (228)
T ss_dssp CCGGGHHHH-HHHHHHCTTCEEEEESS--------CST-----TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHH-HHHHHhcCCCCEEEeCC--------cCH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 112222222 222333 345555421 123 3346778899999998743333467999998887765
Q ss_pred HHH
Q 007936 445 LRI 447 (584)
Q Consensus 445 ~~a 447 (584)
.++
T Consensus 218 ~~~ 220 (228)
T 3ovp_A 218 SEA 220 (228)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 53
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.65 E-value=2.8 Score=41.14 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=83.1
Q ss_pred hhHHhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCc--cc-ccC
Q 007936 288 DIDFGITEGVDFIAISFVK-SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGD--LG-AQI 363 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGD--Lg-~ei 363 (584)
.++.+.+.|+|+|.+..-- + .++.++.+.++ +.|..+.+...-.|+ ++.+++++..+|.|++-.-+ +| -..
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~--~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f 146 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIR--RHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPF 146 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHH--HTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHH--HcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccc
Confidence 4677889999999998644 3 46777777774 445444554444554 67788888899988752211 12 111
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec-CCCCCCCC-hHHHHHH
Q 007936 364 PLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS-GESAMGQF-PDKALTV 439 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs-~ETa~G~y-PveaV~~ 439 (584)
.+....--+++-+.+.+. +.++.+.- .-.|.. +..++..|+|.+... +--..... |.++++.
T Consensus 147 -~~~~l~kI~~lr~~~~~~~~~~~I~VdG--------GI~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~ 212 (231)
T 3ctl_A 147 -IPEMLDKLAELKAWREREGLEYEIEVDG--------SCNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212 (231)
T ss_dssp -CTTHHHHHHHHHHHHHHHTCCCEEEEES--------CCSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHhccCCCceEEEEC--------CcCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHH
Confidence 223333334444444444 45554432 112333 356677899999986 44333335 8999998
Q ss_pred HHHHHH
Q 007936 440 LRSVSL 445 (584)
Q Consensus 440 m~~I~~ 445 (584)
|++...
T Consensus 213 l~~~~~ 218 (231)
T 3ctl_A 213 MTAQIL 218 (231)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 54
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.45 E-value=2.9 Score=42.83 Aligned_cols=112 Identities=20% Similarity=0.214 Sum_probs=70.1
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIP 364 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~ 364 (584)
.+.++.+++.|+|+|.+.+=...+.++.+++ ..++++.++-+.+-...+ .+. +|+|.+--.+.|-..+
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~--------~g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g~~~GG~~G 160 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRELKE--------NGTKVIPVVASDSLARMV---ERAGADAVIAEGMESGGHIG 160 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHHHHH--------TTCEEEEEESSHHHHHHH---HHTTCSCEEEECTTSSEECC
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHHHHH--------cCCcEEEEcCCHHHHHHH---HHcCCCEEEEECCCCCccCC
Confidence 4567778899999999988766554444432 247899998776655433 333 8999993222332222
Q ss_pred -CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 365 -LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 365 -~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
...+ ..+-+.++..+.|++.+.- .- ...|+..++..|+|++++.
T Consensus 161 ~~~~~----~ll~~i~~~~~iPviaaGG---------I~---~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 161 EVTTF----VLVNKVSRSVNIPVIAAGG---------IA---DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp SSCHH----HHHHHHHHHCSSCEEEESS---------CC---SHHHHHHHHHHTCSEEEES
T ss_pred CccHH----HHHHHHHHHcCCCEEEECC---------CC---CHHHHHHHHHhCCCEEEec
Confidence 1122 1122223445899998743 22 2357788888999999985
No 55
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=89.00 E-value=2 Score=44.53 Aligned_cols=160 Identities=10% Similarity=0.036 Sum_probs=100.1
Q ss_pred CCccCHhhhHH-h-HhcCCCEEEE-cCCCCHHHHHHHHHHHHhh---cCCCCceEEEeecCHHHHhcHHHHHHh-CCE--
Q 007936 281 ISPKDWLDIDF-G-ITEGVDFIAI-SFVKSAEVINHLKSYIAAR---SRDSDIAVIAKIESIDSLKNLEEIILA-SDG-- 351 (584)
Q Consensus 281 lt~kD~~dI~~-a-l~~gvD~I~l-SfV~saedV~~lr~~l~~~---~~~~~i~IiAKIEt~~av~NldeIl~~-sDG-- 351 (584)
++..|+..|.. . .+.|+|.|=+ +|+.++++.+.++++.+.. ..-.+..+.+-.=+.. .++..++. .|.
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVLN 114 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEEE
Confidence 56666666654 5 4579999988 6777786666666555310 0112356666665554 45555555 564
Q ss_pred EEEeCCccc----ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCC
Q 007936 352 AMVARGDLG----AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGE 426 (584)
Q Consensus 352 ImIaRGDLg----~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~E 426 (584)
++++-.|+= .....++.....+.+++.|+++|+.|.+.... +-...+-+...+.+++. +...|+|.+.|. +
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 190 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP-D 190 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-C
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-c
Confidence 444433321 12334556677788999999999998876321 10011223444556665 566799999997 7
Q ss_pred CCCCCChHHHHHHHHHHHHHH
Q 007936 427 SAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I~~~a 447 (584)
|.=.-.|.++-+.++.+..+.
T Consensus 191 T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 191 TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp TTCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHHHhc
Confidence 777788999998888886554
No 56
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.39 E-value=3.8 Score=38.89 Aligned_cols=137 Identities=14% Similarity=0.137 Sum_probs=74.4
Q ss_pred CHhhhHHhHhcCCCEEEEcCCC--CH-HHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCccc
Q 007936 285 DWLDIDFGITEGVDFIAISFVK--SA-EVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLG 360 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~--sa-edV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg 360 (584)
+.++++.+++.|+|+|.+.... ++ +.+.++.+.++.. . .+..++..+-|.+-.. ...+. +|.|+++.....
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~-~-~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTH-A-PNVEIMADIATVEEAK---NAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHH-C-TTSEEEEECSSHHHHH---HHHHTTCSEEECTTTTSS
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHh-C-CCceEEecCCCHHHHH---HHHHcCCCEEEeCCCcCc
Confidence 3567888899999999876543 22 2334444444321 1 2356777766644322 22222 799988654332
Q ss_pred ccC-CCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 361 AQI-PLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 361 ~ei-~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
-.- +......-.+.+-+.+...+.|++... ..-+. .|+..++..|+|++++. +++-+ |.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~ipvia~G---------GI~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~ 216 (223)
T 1y0e_A 152 SYTQGQLLYQNDFQFLKDVLQSVDAKVIAEG---------NVITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKR 216 (223)
T ss_dssp TTSTTCCTTHHHHHHHHHHHHHCCSEEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCCcccHHHHHHHHhhCCCCEEEec---------CCCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHH
Confidence 111 111011222233344455689998763 23233 45566777899999996 34433 6655555
Q ss_pred HH
Q 007936 440 LR 441 (584)
Q Consensus 440 m~ 441 (584)
+.
T Consensus 217 ~~ 218 (223)
T 1y0e_A 217 FV 218 (223)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 57
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.29 E-value=3.4 Score=39.87 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=76.4
Q ss_pred hhhHHhHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS-----FVKS----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS-----fV~s----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaR 356 (584)
++++.+.+.|+|+|-+= |+.. .+.++++++.+ +....+--++..++ +.++..+++ +|||.+--
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-----~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~ 95 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-----KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHI 95 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-----CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-----CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECC
Confidence 45567788899997665 7766 66666666543 22234446776653 347888877 89998742
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc---ccceEeecCC--C-CCC
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ---RADALMLSGE--S-AMG 430 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~---G~D~imLs~E--T-a~G 430 (584)
+. .+......++.+++.|+.++++. +|. |..|. ...+.. ++|.+++..- + .--
T Consensus 96 ~~---------~~~~~~~~~~~i~~~g~~igv~~--------~p~-t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~ 154 (228)
T 1h1y_A 96 EV---------SRDNWQELIQSIKAKGMRPGVSL--------RPG-TPVEE---VFPLVEAENPVELVLVMTVEPGFGGQ 154 (228)
T ss_dssp GG---------CTTTHHHHHHHHHHTTCEEEEEE--------CTT-SCGGG---GHHHHHSSSCCSEEEEESSCTTCSSC
T ss_pred CC---------cccHHHHHHHHHHHcCCCEEEEE--------eCC-CCHHH---HHHHHhcCCCCCEEEEEeecCCCCcc
Confidence 11 11111466778888999999874 121 11221 234455 8999988321 1 112
Q ss_pred CChHHHHHHHHHHH
Q 007936 431 QFPDKALTVLRSVS 444 (584)
Q Consensus 431 ~yPveaV~~m~~I~ 444 (584)
+|+-..++.++++.
T Consensus 155 ~~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 155 KFMPEMMEKVRALR 168 (228)
T ss_dssp CCCGGGHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 46656665555553
No 58
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=88.22 E-value=7.8 Score=37.86 Aligned_cols=134 Identities=17% Similarity=0.093 Sum_probs=79.4
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccc
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGA 361 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ 361 (584)
+.+++..+++.|+|+|.+-- ..+++.+.++.+.++. . .+.+++.+-|.+-.+ ...+. +|.|.+.-..+..
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~--~--g~~v~~~v~t~eea~---~a~~~Gad~Ig~~~~g~t~ 162 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH--H--HLLTMADCSSVDDGL---ACQRLGADIIGTTMSGYTT 162 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH--T--TCEEEEECCSHHHHH---HHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH--C--CCEEEEeCCCHHHHH---HHHhCCCCEEEEcCccCCC
Confidence 45678888999999988643 3466777777777742 2 467888765543332 22223 7888543211211
Q ss_pred c--CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 362 Q--IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 362 e--i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
. .....+. .++..++.++|+|... ..-|. .|+..+...|+|++++. |++.+ |.+..+.
T Consensus 163 ~~~~~~~~~~-----~i~~l~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~ 222 (232)
T 3igs_A 163 PDTPEEPDLP-----LVKALHDAGCRVIAEG---------RYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGW 222 (232)
T ss_dssp SSCCSSCCHH-----HHHHHHHTTCCEEEES---------CCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCHH-----HHHHHHhcCCcEEEEC---------CCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHH
Confidence 1 1112322 2222233389998653 33333 46677778899999996 55555 7777776
Q ss_pred HHHHHH
Q 007936 440 LRSVSL 445 (584)
Q Consensus 440 m~~I~~ 445 (584)
+.+..+
T Consensus 223 ~~~~i~ 228 (232)
T 3igs_A 223 YNDALK 228 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 59
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.19 E-value=8.3 Score=39.65 Aligned_cols=168 Identities=16% Similarity=0.140 Sum_probs=102.8
Q ss_pred ccCCcccCCccccCCCCCccCHhhhHHh-HhcCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCCceEEEee-cCHHHHhc
Q 007936 265 WRDGSLVRERNAMLPTISPKDWLDIDFG-ITEGVDFIAISF-VKSAEVINHLKSYIAARSRDSDIAVIAKI-ESIDSLKN 341 (584)
Q Consensus 265 ~~~~~~lp~~~~~lp~lt~kD~~dI~~a-l~~gvD~I~lSf-V~saedV~~lr~~l~~~~~~~~i~IiAKI-Et~~av~N 341 (584)
.|||-+-++. .++..|+..|... .+.|+|.|=+-| +-+++|.+.++.+.+. ..++.+.+-. =+.++++.
T Consensus 14 lRDG~Q~~~~-----~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l~r~~~~~i~~ 85 (325)
T 3eeg_A 14 LRDGEQVPGC-----QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA---VTRPTICALTRAKEADINI 85 (325)
T ss_dssp GGCC------------CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH---CCSSEEEEECCSCHHHHHH
T ss_pred CCCcccCCCC-----CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh---CCCCEEEEeecCCHHHHHH
Confidence 3555544433 3455666666555 468999997754 5588888887776632 2345665554 24445543
Q ss_pred HHHHHHh--CC--EEEEeCCccc----ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHH
Q 007936 342 LEEIILA--SD--GAMVARGDLG----AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEA 413 (584)
Q Consensus 342 ldeIl~~--sD--GImIaRGDLg----~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~na 413 (584)
.-+-+.- .| .++++-.|+- .....+++....+.+++.|+++|+.|.+..+ ...+-+...+.+++.+
T Consensus 86 a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~ 159 (325)
T 3eeg_A 86 AGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEA 159 (325)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHH
T ss_pred HHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHH
Confidence 2222222 34 3566666653 2345567777778999999999999877532 1123344556677765
Q ss_pred H-HcccceEeecCCCCCCCChHHHHHHHHHHHHHH
Q 007936 414 V-RQRADALMLSGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 414 v-~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~a 447 (584)
+ ..|+|.|.|. +|.=.-.|.++-+.++.+..+.
T Consensus 160 ~~~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 160 VIEAGADVVNIP-DTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHHTCSEEECC-BSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEec-CccCCcCHHHHHHHHHHHHHhC
Confidence 4 4599999987 8888889999888887776544
No 60
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.96 E-value=2.6 Score=49.83 Aligned_cols=119 Identities=16% Similarity=0.290 Sum_probs=72.2
Q ss_pred HHhHhcCCCEEEEcCC---------------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-----C
Q 007936 290 DFGITEGVDFIAISFV---------------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-----S 349 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV---------------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-----s 349 (584)
+.+.+.|+|+|.+.+- ++++.+.++.+.++.. -++.|++|+ ++ .+.++.++++. +
T Consensus 655 ~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~---~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~ 729 (1025)
T 1gte_A 655 RKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA---VQIPFFAKL-TP-NVTDIVSIARAAKEGGA 729 (1025)
T ss_dssp HHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH---CSSCEEEEE-CS-CSSCHHHHHHHHHHHTC
T ss_pred HHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh---hCCceEEEe-CC-ChHHHHHHHHHHHHcCC
Confidence 3445789999999542 4556666666666432 247899999 32 34456666554 7
Q ss_pred CEEEEe-----------------------CCcccccCCCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChh
Q 007936 350 DGAMVA-----------------------RGDLGAQIPLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRA 405 (584)
Q Consensus 350 DGImIa-----------------------RGDLg~ei~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrA 405 (584)
|+|.+. |...+---+....+..-..+-+..++. +.|+|...- .-|
T Consensus 730 d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GG---------I~s-- 798 (1025)
T 1gte_A 730 DGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGG---------IDS-- 798 (1025)
T ss_dssp SEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESS---------CCS--
T ss_pred CEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecC---------cCC--
Confidence 999982 111111112233444444444445555 789887643 223
Q ss_pred hHHHHHHHHHcccceEeecC
Q 007936 406 EVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 406 Ev~Dv~nav~~G~D~imLs~ 425 (584)
..|+..++..|+|++|+..
T Consensus 799 -~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 799 -AESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp -HHHHHHHHHTTCSEEEESH
T ss_pred -HHHHHHHHHcCCCEEEEee
Confidence 4577888889999999964
No 61
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.92 E-value=1.1 Score=43.73 Aligned_cols=135 Identities=15% Similarity=0.133 Sum_probs=77.6
Q ss_pred hhHHhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhhcCCCCceEEEee--cCHHHHhcHHHHHHhCCEEEEeCCccccc-
Q 007936 288 DIDFGITEGVDFIAISFV--KSAEVINHLKSYIAARSRDSDIAVIAKI--ESIDSLKNLEEIILASDGAMVARGDLGAQ- 362 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV--~saedV~~lr~~l~~~~~~~~i~IiAKI--Et~~av~NldeIl~~sDGImIaRGDLg~e- 362 (584)
.++.+.+.|+|+|.+..- .+ +...++.+.++ +.| ..+..-+ .|+ .+.+++++..+|.|.+..-.-|..
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~--~~g--~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~gg 149 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIR--ELG--KKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGG 149 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHH--HTT--CEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHH--HcC--CcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCC
Confidence 467888999999999976 43 34555555552 334 3444444 554 455777888899887775443321
Q ss_pred -CCCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 363 -IPLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 363 -i~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
--.+.....-+++-+.+.+. +.|+.+.-- -.+.. +......|+|++...+--.....|.++++.
T Consensus 150 q~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GG--------I~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~ 216 (230)
T 1tqj_A 150 QSFIPEVLPKIRALRQMCDERGLDPWIEVDGG--------LKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAG 216 (230)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESS--------CCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHhcCCCCcEEEECC--------cCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHH
Confidence 11123333334444444333 567765421 12222 245556699999987443334468888877
Q ss_pred HHH
Q 007936 440 LRS 442 (584)
Q Consensus 440 m~~ 442 (584)
|++
T Consensus 217 l~~ 219 (230)
T 1tqj_A 217 VRN 219 (230)
T ss_dssp HHT
T ss_pred HHH
Confidence 754
No 62
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=87.87 E-value=14 Score=38.63 Aligned_cols=168 Identities=14% Similarity=0.187 Sum_probs=108.0
Q ss_pred ccCCcccCCccccCCCCCccCHhhhHHhH-hcCCCEEEE-cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec-CHHHHhc
Q 007936 265 WRDGSLVRERNAMLPTISPKDWLDIDFGI-TEGVDFIAI-SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE-SIDSLKN 341 (584)
Q Consensus 265 ~~~~~~lp~~~~~lp~lt~kD~~dI~~al-~~gvD~I~l-SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE-t~~av~N 341 (584)
.|||.+-++. .++..|+..|...+ +.|+|.|=+ +++-++.|.+.++.+.+ . ..+..+.+-.= +...++.
T Consensus 20 LRDG~Q~~~~-----~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~--~-~~~~~i~~l~r~~~~di~~ 91 (370)
T 3rmj_A 20 LRDGEQSPGA-----AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAK--T-ITKSTVCSLSRAIERDIRQ 91 (370)
T ss_dssp CCCCTTSTTC-----CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHT--T-CSSSEEEEEEESSHHHHHH
T ss_pred CCccccCCCC-----CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHH--h-CCCCeEEEEecCCHHHHHH
Confidence 4555554443 45777777776655 579999866 46677889999988773 2 23344444331 4444433
Q ss_pred HHHHHH-h-CC--EEEEeCCcccc----cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-
Q 007936 342 LEEIIL-A-SD--GAMVARGDLGA----QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE- 412 (584)
Q Consensus 342 ldeIl~-~-sD--GImIaRGDLg~----ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n- 412 (584)
.-+-+. + .| .++++-.|+-. .+..+++......+++.|+++|..|.+..+ ...+-+...+.+++.
T Consensus 92 a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~ 165 (370)
T 3rmj_A 92 AGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGA 165 (370)
T ss_dssp HHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHH
Confidence 222221 2 34 46777666532 344566777777899999999998876532 112233344556555
Q ss_pred HHHcccceEeecCCCCCCCChHHHHHHHHHHHHHH
Q 007936 413 AVRQRADALMLSGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 413 av~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~a 447 (584)
+...|+|.|.|. +|.=.-.|.++-+.++.+..+.
T Consensus 166 ~~~~Ga~~i~l~-DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 166 VIEAGATTINIP-DTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp HHHHTCCEEEEE-CSSSCCCHHHHHHHHHHHHHHS
T ss_pred HHHcCCCEEEec-CccCCcCHHHHHHHHHHHHHhC
Confidence 567899999997 8888889999988888887654
No 63
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=87.81 E-value=7.4 Score=40.35 Aligned_cols=112 Identities=15% Similarity=0.227 Sum_probs=67.2
Q ss_pred HhhhHHhHhcCCCEEEEcCCCC-HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEE-eCC---cc
Q 007936 286 WLDIDFGITEGVDFIAISFVKS-AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMV-ARG---DL 359 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~s-aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImI-aRG---DL 359 (584)
.+.++.+++.|+|+|.+.+=.. .+.++.+++ ..+.++.++-|.+-.. ...+. +|+|.+ ++. -.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~--------~g~~v~~~v~t~~~a~---~a~~~GaD~i~v~g~~~GGh~ 180 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR--------AGTLTLVTATTPEEAR---AVEAAGADAVIAQGVEAGGHQ 180 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH--------TTCEEEEEESSHHHHH---HHHHTTCSEEEEECTTCSEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH--------CCCeEEEECCCHHHHH---HHHHcCCCEEEEeCCCcCCcC
Confidence 4567788999999999987543 455555543 1368888887765332 22223 899999 642 11
Q ss_pred cccCC--------CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 360 GAQIP--------LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 360 g~ei~--------~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
|...+ ...+ ..-++ .+...++|||.+--+ -+ -.++..++..|+|++++.
T Consensus 181 g~~~~~~~~~~~~~~~~-~~l~~---i~~~~~iPViaaGGI---------~~---~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 181 GTHRDSSEDDGAGIGLL-SLLAQ---VREAVDIPVVAAGGI---------MR---GGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CCSSCCGGGTTCCCCHH-HHHHH---HHHHCSSCEEEESSC---------CS---HHHHHHHHHTTCSEEEES
T ss_pred CCcccccccccccccHH-HHHHH---HHHhcCceEEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 22111 1111 11122 233458999987432 12 246677888999999985
No 64
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.60 E-value=5.5 Score=40.53 Aligned_cols=114 Identities=16% Similarity=0.203 Sum_probs=66.7
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE-eCCcccccCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV-ARGDLGAQIP 364 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI-aRGDLg~ei~ 364 (584)
.+.++.+++.|+|+|.+.+=...+.++.+++ . .++++.++-|.+....+. -.-+|+|.+ ++ .-|-..+
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~~------~--gi~vi~~v~t~~~a~~~~--~~GaD~i~v~g~-~~GG~~G 154 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFRR------H--GVKVIHKCTAVRHALKAE--RLGVDAVSIDGF-ECAGHPG 154 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHHH------T--TCEEEEEESSHHHHHHHH--HTTCSEEEEECT-TCSBCCC
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHHH------c--CCCEEeeCCCHHHHHHHH--HcCCCEEEEECC-CCCcCCC
Confidence 3567788899999999998655444433332 1 478888887765433211 123899999 43 1121212
Q ss_pred CCChHHHHHHHHHHH-HHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 365 LEQVPSAQQKIVQLC-RQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c-~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
....+.+ ..+... ...++||+.+.-+ -+ -.|+..++..|+|++++.
T Consensus 155 ~~~~~~~--~~l~~v~~~~~iPviaaGGI---------~~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 155 EDDIPGL--VLLPAAANRLRVPIIASGGF---------AD---GRGLVAALALGADAINMG 201 (328)
T ss_dssp SSCCCHH--HHHHHHHTTCCSCEEEESSC---------CS---HHHHHHHHHHTCSEEEES
T ss_pred CccccHH--HHHHHHHHhcCCCEEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 1111111 222333 3458999988432 22 236677788899999985
No 65
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.45 E-value=4.9 Score=37.98 Aligned_cols=137 Identities=11% Similarity=0.074 Sum_probs=77.6
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE-eCC-cc-cccCC
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV-ARG-DL-GAQIP 364 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI-aRG-DL-g~ei~ 364 (584)
.++.+.+.|+|+|.+.--.. ++..++.+.++ +.+ .+++.-+.+....+.+.++...+|.|++ +.+ -. |...+
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~--~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~ 150 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIK--AAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFI 150 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHH--HTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCC
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHH--HcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccC
Confidence 46888899999999876554 45556666663 223 4455556333333445555566898865 321 11 22222
Q ss_pred CCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHH
Q 007936 365 LEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRS 442 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~ 442 (584)
.. ...--+++-+.+... +.|++++-- -.| .++..+...|+|++....--..+..|.++++.+++
T Consensus 151 ~~-~~~~i~~~~~~~~~~~~~~~i~v~GG--------I~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 151 PE-CLEKVATVAKWRDEKGLSFDIEVDGG--------VDN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRT 216 (220)
T ss_dssp GG-GHHHHHHHHHHHHHTTCCCEEEEESS--------CCT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHhcCCCceEEEECc--------CCH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 21 112223333344333 567766521 123 34455666699999997655556779999888765
Q ss_pred H
Q 007936 443 V 443 (584)
Q Consensus 443 I 443 (584)
.
T Consensus 217 ~ 217 (220)
T 2fli_A 217 A 217 (220)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=86.41 E-value=4.5 Score=43.58 Aligned_cols=122 Identities=20% Similarity=0.294 Sum_probs=70.4
Q ss_pred CHhhhHHhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEeCCcccc
Q 007936 285 DWLDIDFGITEGVDFIAISFVK-SAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVARGDLGA 361 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIaRGDLg~ 361 (584)
..+.+.+.++.|+|.|.+.+.. ......+..+.++.. .+ +..|++ -+-|.+....+ .+. +|+|.++-|-=+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-~p-~~pvi~g~~~t~e~a~~l---~~~G~d~I~v~~~~G~~ 312 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-YP-DLPVVAGNVATPEGTEAL---IKAGADAVKVGVGPGSI 312 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CT-TSCEEEEEECSHHHHHHH---HHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-CC-CceEEeCCcCCHHHHHHH---HHcCCCEEEEcCCCCcc
Confidence 3567788999999999986653 122222222223211 12 255554 35555544333 333 8999995431000
Q ss_pred -------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 362 -------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 362 -------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
..+.+. ......+.+.++..+.|||.+.-+- .-.|+..++..|||++++.
T Consensus 313 ~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 313 CTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp CHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 011222 3344556666666799999864322 3468899999999999975
No 67
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=86.39 E-value=8.7 Score=36.49 Aligned_cols=133 Identities=8% Similarity=0.019 Sum_probs=73.0
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCCh
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQV 368 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V 368 (584)
++.+.+.|+|+|-+..-. ..+..+++.. . ...+.+-+.|.+-+... ...-+|.|+++..--+...+-. .
T Consensus 81 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~-----~-~~~ig~sv~t~~~~~~a--~~~gaD~i~~~~~f~~~~~~g~-~ 149 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSGS--FSPKQIRARF-----P-HLHIGRSVHSLEEAVQA--EKEDADYVLFGHVFETDCKKGL-E 149 (221)
T ss_dssp HHHHHTTTCCEEEECTTS--CCHHHHHHHC-----T-TCEEEEEECSHHHHHHH--HHTTCSEEEEECCC----------
T ss_pred HHHHHHcCCCEEEeCCCc--cCHHHHHHHC-----C-CCEEEEEcCCHHHHHHH--HhCCCCEEEECCccccCCCCCC-C
Confidence 466789999999998542 2345555433 1 34555555554432211 1122899999873111111000 0
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHH
Q 007936 369 PSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSL 445 (584)
Q Consensus 369 ~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~ 445 (584)
+.-.+.+-+.++..+.|++.+. .. +. .++..++..|+|++.+++--...+.|.++++.+.+.++
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~G---------GI-~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIG---------GM-TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEES---------SC-CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEEC---------CC-CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 1112333334445689998874 33 33 35566777899999997654444557777777665543
No 68
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=86.38 E-value=6 Score=37.04 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=74.4
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceE-EEee--cCHHH-HhcHHHHHHhCCEEEEeCCcccccCC
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAV-IAKI--ESIDS-LKNLEEIILASDGAMVARGDLGAQIP 364 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~I-iAKI--Et~~a-v~NldeIl~~sDGImIaRGDLg~ei~ 364 (584)
++.+.+.|+|+|.++.-...+.+.++++.++.. + ..+ ++.. .|+.. ++.+.+. -.|.+-+.++-.+...+
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~--g--~~~gv~~~s~~~p~~~~~~~~~~--g~d~v~~~~~~~~~~~g 143 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAH--N--KGVVVDLIGIEDKATRAQEVRAL--GAKFVEMHAGLDEQAKP 143 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--T--CEEEEECTTCSSHHHHHHHHHHT--TCSEEEEECCHHHHTST
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHc--C--CceEEEEecCCChHHHHHHHHHh--CCCEEEEEecccccccC
Confidence 567889999999987766667888888888532 2 233 2222 12222 2222221 27888344444332233
Q ss_pred CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHH
Q 007936 365 LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRS 442 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~ 442 (584)
..-.. +++-+.+.. ..|+++.-- -.|. .+..++..|+|++....--.....|.++++.+++
T Consensus 144 ~~~~~---~~i~~~~~~-~~pi~v~GG--------I~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 144 GFDLN---GLLAAGEKA-RVPFSVAGG--------VKVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TCCTH---HHHHHHHHH-TSCEEEESS--------CCGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CCchH---HHHHHhhCC-CCCEEEECC--------cCHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 22221 444444433 678776421 1222 5567789999999986544344568888776653
No 69
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=86.23 E-value=4.3 Score=41.10 Aligned_cols=159 Identities=12% Similarity=0.051 Sum_probs=94.3
Q ss_pred CCccCHhhhHH-hHhcCCCEEEEcC-CCCH-----HHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEE
Q 007936 281 ISPKDWLDIDF-GITEGVDFIAISF-VKSA-----EVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGA 352 (584)
Q Consensus 281 lt~kD~~dI~~-al~~gvD~I~lSf-V~sa-----edV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGI 352 (584)
++..++..|.. ..+.|++.|-+.| +... .|..++.+.+. . ..++.+.+.+.+.+ +++.-++. .|.|
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~--~-~~~~~~~~l~~~~~---~i~~a~~aG~~~v 100 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIR--Q-RPGVTYAALAPNLK---GFEAALESGVKEV 100 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSC--C-CTTSEEEEECCSHH---HHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhh--h-cCCCEEEEEeCCHH---HHHHHHhCCcCEE
Confidence 45666666654 4568999988754 3321 34444444442 1 24566666664433 33333333 6887
Q ss_pred EE-e-CCcc----cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 353 MV-A-RGDL----GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 353 mI-a-RGDL----g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+| . -.|+ -+.++.++.....+++++.|+++|+.|-..=-+.-+-....+-+..++.+++. +...|+|.+.|.
T Consensus 101 ~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~- 179 (302)
T 2ftp_A 101 AVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG- 179 (302)
T ss_dssp EEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 76 2 2242 22356778888889999999999999842100000000011234455666555 457899999999
Q ss_pred CCCCCCChHHHHHHHHHHHHH
Q 007936 426 ESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~ 446 (584)
+|.=...|.+.-+.++.+.+.
T Consensus 180 DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 180 DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp ESSSCCCHHHHHHHHHHHTTT
T ss_pred CCCCCcCHHHHHHHHHHHHHh
Confidence 666567899988888877543
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=86.15 E-value=3.9 Score=42.57 Aligned_cols=122 Identities=20% Similarity=0.215 Sum_probs=69.7
Q ss_pred HhhhHHhHhc--CCCEEEEcCC-CCHHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEeCCccc
Q 007936 286 WLDIDFGITE--GVDFIAISFV-KSAEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVARGDLG 360 (584)
Q Consensus 286 ~~dI~~al~~--gvD~I~lSfV-~saedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIaRGDLg 360 (584)
.+.++..++. |+|.|.+..- ....++.+..+.+++. . .++.|+++ +-|.+-. ....++ +|+|.++-|-=+
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-~-~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-F-PQHTIMAGNVVTGEMV---EELILSGADIIKVGIGPGS 194 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-C-TTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred HHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-c-CCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCCCc
Confidence 4455666676 9998877532 1233333333333211 1 14677654 6554433 333344 899998643100
Q ss_pred cc-------CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 361 AQ-------IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 361 ~e-------i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
.+ .+.+ ....-..+.+.|...+.|||.+.-+. .-.|++.|+..|||++++..
T Consensus 195 ~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 195 VCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp TBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 01 1111 23344566677777899999864332 34788999999999998864
No 71
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=85.91 E-value=3.4 Score=40.70 Aligned_cols=46 Identities=13% Similarity=0.078 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCEE--EEeCCCCCHHHHHHHHHHHHHHHHHhCCceE
Q 007936 120 FEQLEALAVGGMNVA--RINMCHGTREWHRRVIERVRRLNEEKGFAVA 165 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~--RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~ 165 (584)
.+.+++.+++|++.. .+|....+.++..+.++.+.++.+++|.++-
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~vi 149 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLI 149 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEE
Confidence 678999999999999 8988888888777888888888877776653
No 72
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=85.55 E-value=4 Score=43.49 Aligned_cols=153 Identities=18% Similarity=0.282 Sum_probs=98.0
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHh-hcCCCCceEEEeec--CHHHHhcHHHHHHhCCEEEEeCCcccccCC
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAA-RSRDSDIAVIAKIE--SIDSLKNLEEIILASDGAMVARGDLGAQIP 364 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~-~~~~~~i~IiAKIE--t~~av~NldeIl~~sDGImIaRGDLg~ei~ 364 (584)
.|....+.|+|.|-++ |.+.++.+.+.++-+. ...+.+++++|-|= -..++..+++..+..|.+=|-||.+|-.
T Consensus 43 QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~-- 119 (406)
T 4g9p_A 43 QVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG-- 119 (406)
T ss_dssp HHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST--
T ss_pred HHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc--
Confidence 3455567899998887 7787777776655432 23356799999884 3567888888888999999999998631
Q ss_pred CCChHHHHHHHHHHHHHcCCCeEEeh-------hhhHhhh----cCCCCChh-----h--HHH----HHHHHHccc--ce
Q 007936 365 LEQVPSAQQKIVQLCRQLNKPVIVAS-------QLLESMI----EYPTPTRA-----E--VAD----VSEAVRQRA--DA 420 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~gKPvivAT-------qmLeSMi----~~p~PTrA-----E--v~D----v~nav~~G~--D~ 420 (584)
.+...--+.++++|+++|+|+=+-+ .+|+.+- ..|.|.-+ | +.. +.-+...|+ |=
T Consensus 120 -~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~ 198 (406)
T 4g9p_A 120 -RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDK 198 (406)
T ss_dssp -HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred -ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 1223445679999999999965433 4454442 34555322 1 111 111223344 66
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHHH
Q 007936 421 LMLSGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 421 imLs~ETa~G~yPveaV~~m~~I~~~a 447 (584)
+++|--.+ .+..+|+.-+.+.++.
T Consensus 199 iviS~KaS---dv~~~i~aYr~la~~~ 222 (406)
T 4g9p_A 199 LVLSAKVS---KARDLVWVYRELARRT 222 (406)
T ss_dssp EEEEEECS---SHHHHHHHHHHHHHHC
T ss_pred eEEEeecC---CHHHHHHHHHHHHHhC
Confidence 88886554 4777777766665443
No 73
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=84.59 E-value=12 Score=36.61 Aligned_cols=134 Identities=11% Similarity=0.093 Sum_probs=77.7
Q ss_pred HhhhHHhHhcCCCEE--EE-cCCCCH----HHHHHHHHHHHhhcCCCCceEEEee----------cCHHHHhcHHHHHHh
Q 007936 286 WLDIDFGITEGVDFI--AI-SFVKSA----EVINHLKSYIAARSRDSDIAVIAKI----------ESIDSLKNLEEIILA 348 (584)
Q Consensus 286 ~~dI~~al~~gvD~I--~l-SfV~sa----edV~~lr~~l~~~~~~~~i~IiAKI----------Et~~av~NldeIl~~ 348 (584)
.+.++.+++.|+|+| .+ ....+. +++.++++.++. . .+.++..+ -+. +++++.++.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~--~--g~~viv~~~~~G~~l~~~~~~---~~~~~~a~~ 174 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY--W--GMPLIAMMYPRGKHIQNERDP---ELVAHAARL 174 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH--H--TCCEEEEEEECSTTCSCTTCH---HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH--c--CCCEEEEeCCCCcccCCCCCH---hHHHHHHHH
Confidence 456788999999999 32 222222 235555555532 2 24555554 222 344444222
Q ss_pred -----CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC-ChhhHHH-HHHHHHcccceE
Q 007936 349 -----SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTP-TRAEVAD-VSEAVRQRADAL 421 (584)
Q Consensus 349 -----sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~P-TrAEv~D-v~nav~~G~D~i 421 (584)
+|.|-++.+ .+ + +.+-+.+...+.|++.+.- ..+ +..+.-+ +..++..|+|++
T Consensus 175 a~~~Gad~i~~~~~-----~~---~----~~l~~i~~~~~ipvva~GG--------i~~~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 175 GAELGADIVKTSYT-----GD---I----DSFRDVVKGCPAPVVVAGG--------PKTNTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp HHHTTCSEEEECCC-----SS---H----HHHHHHHHHCSSCEEEECC--------SCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHcCCCEEEECCC-----CC---H----HHHHHHHHhCCCCEEEEeC--------CCCCCHHHHHHHHHHHHHcCCcEE
Confidence 798888731 11 1 1222334455899987632 122 2333222 667778999999
Q ss_pred eecCCCCCCCChHHHHHHHHHHHHH
Q 007936 422 MLSGESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 422 mLs~ETa~G~yPveaV~~m~~I~~~ 446 (584)
+....-.....|.++++.+..++.+
T Consensus 235 ~vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 235 AVGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp ECCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred EeeHHhhCCCCHHHHHHHHHHHHhc
Confidence 9876666667899988888777654
No 74
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=84.55 E-value=1.2 Score=46.01 Aligned_cols=116 Identities=20% Similarity=0.292 Sum_probs=66.1
Q ss_pred cCHhhhHHhHhcC--CCEEEEcCCC-C----HHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEE
Q 007936 284 KDWLDIDFGITEG--VDFIAISFVK-S----AEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMV 354 (584)
Q Consensus 284 kD~~dI~~al~~g--vD~I~lSfV~-s----aedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImI 354 (584)
.+.+.++..++.| +|+|.+..-. + .+.|+++++.. ..+.++.. |-+.+ ......++ +|+|.+
T Consensus 106 ~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~------~~~~vi~G~v~s~e---~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 106 DEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL------PESFVIAGNVGTPE---AVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC------TTSEEEEEEECSHH---HHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC------CCCEEEECCcCCHH---HHHHHHHcCCCEEEE
Confidence 4455667778888 9998764322 2 23344444332 13566655 65543 33444444 899999
Q ss_pred eC--Cc-------ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 355 AR--GD-------LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 355 aR--GD-------Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
+- |= .+...| .+ ....+.+.++..+.|||.+.-+- --.|+..|+..|||++|+.
T Consensus 177 s~hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp CSSCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred ecCCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 31 10 111111 00 12334444555589999864322 3468899999999999985
No 75
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=84.15 E-value=8.1 Score=37.71 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=74.8
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccc
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGA 361 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ 361 (584)
+.+++..+++.|+|+|++-- ..+++.+.++.+.++. . .+.+++.+-|.+-.+ ...+. +|.|.+.-.++..
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~--~--g~~v~~~v~t~eea~---~a~~~Gad~Ig~~~~g~t~ 162 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL--H--GLLAMADCSTVNEGI---SCHQKGIEFIGTTLSGYTG 162 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH--T--TCEEEEECSSHHHHH---HHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH--C--CCEEEEecCCHHHHH---HHHhCCCCEEEecCccCCC
Confidence 45678888999999987643 3466777777777742 2 467888765543332 22223 7888543211211
Q ss_pred --cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 362 --QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 362 --ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
......+ ..++..++.+.|+|... ..-|. .|+..+...|+|++++. |++.+ |....+.
T Consensus 163 ~~~~~~~~~-----~li~~l~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~ 222 (229)
T 3q58_A 163 PITPVEPDL-----AMVTQLSHAGCRVIAEG---------RYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQW 222 (229)
T ss_dssp SCCCSSCCH-----HHHHHHHTTTCCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCcCCCCCH-----HHHHHHHHcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHH
Confidence 1111232 22222233389998653 33344 46677778899999996 55554 5555444
Q ss_pred HH
Q 007936 440 LR 441 (584)
Q Consensus 440 m~ 441 (584)
+.
T Consensus 223 f~ 224 (229)
T 3q58_A 223 FS 224 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 76
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=84.05 E-value=7 Score=38.52 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=82.5
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcC---------CCCceEEEeecCHHHHhcHHHHHHhCCEEEE--
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSR---------DSDIAVIAKIESIDSLKNLEEIILASDGAMV-- 354 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~---------~~~i~IiAKIEt~~av~NldeIl~~sDGImI-- 354 (584)
...++.+.+.|+|+|.+..-.+ +++.++.+.+ ++. |..+.+-..-+|+ ++.+++++..+|.|++
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i--~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMs 156 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWL--AKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLT 156 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHH--TTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEES
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHH--HhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeee
Confidence 4557788999999999987665 5677777777 333 3333444444565 6677888888998877
Q ss_pred -eCCcccccCCCCChHHHHHHHHHHHHHc-----CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH--cccceEeecCC
Q 007936 355 -ARGDLGAQIPLEQVPSAQQKIVQLCRQL-----NKPVIVASQLLESMIEYPTPTRAEVADVSEAVR--QRADALMLSGE 426 (584)
Q Consensus 355 -aRGDLg~ei~~e~V~~~Qk~II~~c~~~-----gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~--~G~D~imLs~E 426 (584)
.+| +|-+ ...+...++|-+.++.. +.|+.+.-- =+ ...+..++. .|+|++...+-
T Consensus 157 v~pg-fggq---~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGG----------I~---~~~~~~~~~~~aGad~~VvGSa 219 (237)
T 3cu2_A 157 LDPR-NGTK---YPSELILDRVIQVEKRLGNRRVEKLINIDGS----------MT---LELAKYFKQGTHQIDWLVSGSA 219 (237)
T ss_dssp EETT-TTEE---CCHHHHHHHHHHHHHHHGGGGGGCEEEEESS----------CC---HHHHHHHHHSSSCCCCEEECGG
T ss_pred eccC-cCCe---ecChhHHHHHHHHHHHHHhcCCCceEEEECC----------cC---HHHHHHHHHhCCCCcEEEEeeH
Confidence 554 2222 12444444443333332 466665421 11 123456677 89999998744
Q ss_pred CCCCCChHHHHHHHHHH
Q 007936 427 SAMGQFPDKALTVLRSV 443 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I 443 (584)
-... -|.++++.|++.
T Consensus 220 If~~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 220 LFSG-ELKTNLKVWKSS 235 (237)
T ss_dssp GGSS-CHHHHHHHHHHH
T ss_pred HhCC-CHHHHHHHHHHh
Confidence 3333 688888887653
No 77
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.94 E-value=24 Score=35.67 Aligned_cols=155 Identities=15% Similarity=0.163 Sum_probs=101.2
Q ss_pred CCCccCHhhhHHh-HhcCCCEEEEc-CCCCHHHHHHHHHHHHhhcCCCCceEEEeecC-HHHHhcHHHHHHh-----CC-
Q 007936 280 TISPKDWLDIDFG-ITEGVDFIAIS-FVKSAEVINHLKSYIAARSRDSDIAVIAKIES-IDSLKNLEEIILA-----SD- 350 (584)
Q Consensus 280 ~lt~kD~~dI~~a-l~~gvD~I~lS-fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt-~~av~NldeIl~~-----sD- 350 (584)
.++..|+..|... .+.|+|.|=+- ++.++.|.+.++.+.+. ..+..+.+-.-+ ...+ +..++. .|
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l~~~~~~di---~~a~~~~~~ag~~~ 96 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA---IKHCSVTGLARCVEGDI---DRAEEALKDAVSPQ 96 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH---CCSSEEEEEEESSHHHH---HHHHHHHTTCSSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh---cCCCEEEEEecCCHHHH---HHHHHHHhhcCCCE
Confidence 3466677766555 46799998774 44467777777776632 234666666643 2333 333332 34
Q ss_pred -EEEEeCCccc----ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeec
Q 007936 351 -GAMVARGDLG----AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLS 424 (584)
Q Consensus 351 -GImIaRGDLg----~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs 424 (584)
.++++-.|+- .....++.....+.+++.|+++|..|.+... ..++-+...+.+++. +...|+|.|.|.
T Consensus 97 v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~ 170 (293)
T 3ewb_X 97 IHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp EEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 4566666653 2344567777788999999999999987532 122333444666666 566899999997
Q ss_pred CCCCCCCChHHHHHHHHHHHHHH
Q 007936 425 GESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 425 ~ETa~G~yPveaV~~m~~I~~~a 447 (584)
+|.=.-.|.++-+.++.+..+.
T Consensus 171 -DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 171 -DTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp -CSSSCCCHHHHHHHHHHHHHHC
T ss_pred -CCCCCCCHHHHHHHHHHHHHhc
Confidence 7887888999888887776543
No 78
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.56 E-value=10 Score=38.10 Aligned_cols=129 Identities=15% Similarity=0.125 Sum_probs=77.8
Q ss_pred hhhHHhHhcCCCEEEEc-CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCccccc-C
Q 007936 287 LDIDFGITEGVDFIAIS-FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQ-I 363 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS-fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~e-i 363 (584)
..+..+...|+|+|.+. -.-+.+++.++.+..+ ..| +.+++-+-|.+-++.. ++. +|.|-+..-||... .
T Consensus 126 ~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~--~lG--l~~lvev~t~ee~~~A---~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 126 YQIHEARAHGADMLLLIVAALEQSVLVSMLDRTE--SLG--MTALVEVHTEQEADRA---LKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp HHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHH--HTT--CEEEEEESSHHHHHHH---HHHTCSEEEEESBCTTTCCB
T ss_pred HHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHH--HCC--CcEEEEcCCHHHHHHH---HHCCCCEEEECCCccccccc
Confidence 35778889999999982 3334667777777773 333 4566666555443332 222 89999987676432 2
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHH
Q 007936 364 PLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLR 441 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~ 441 (584)
+++.+ .+.+... ++|++.. ...-|. .|+......|+|+++...---....|.++++.+.
T Consensus 199 dl~~~-------~~l~~~v~~~~pvVae---------gGI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 199 DRDCF-------ARIAPGLPSSVIRIAE---------SGVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp CTTHH-------HHHGGGSCTTSEEEEE---------SCCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred CHHHH-------HHHHHhCcccCEEEEE---------CCCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 33322 2222333 6777754 233344 4566777889999998644334456777776653
No 79
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=83.17 E-value=6 Score=39.41 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=76.6
Q ss_pred CccCHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHH----------hcHHHHHHh-C
Q 007936 282 SPKDWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSL----------KNLEEIILA-S 349 (584)
Q Consensus 282 t~kD~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av----------~NldeIl~~-s 349 (584)
+..|.+. ++.+++.|++.|+++ +.-+..+. ..++.++.|+.+.-++ ...++.++. +
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~--------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga 106 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY--------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGA 106 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC--------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTC
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh--------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCC
Confidence 3444443 356788999999998 33333332 2336777777665554 446666666 7
Q ss_pred CEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHH-HHHHHcccceEeec
Q 007936 350 DGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADV-SEAVRQRADALMLS 424 (584)
Q Consensus 350 DGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv-~nav~~G~D~imLs 424 (584)
|+|-+ |-+++ +-...++...-+++.+.|+++|.|+|+-+..=..-..+ ..+..++... .-+...|+|.+=.+
T Consensus 107 ~~v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~-~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 107 SAVGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVN-ETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp SEEEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCC-TTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CEEEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCcccc-CCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 87754 33344 22334566666788999999999998632100000000 0155566553 44788999998887
No 80
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=83.13 E-value=5.2 Score=42.08 Aligned_cols=121 Identities=21% Similarity=0.280 Sum_probs=70.5
Q ss_pred cCHhhhHHhHhcCCCEEEE--cCCCCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEeCCcc
Q 007936 284 KDWLDIDFGITEGVDFIAI--SFVKSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~l--SfV~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIaRGDL 359 (584)
.+.+.++.+++.|+|+|.+ ++ .+++.+.++.+.++.. .+ +++|++ .+-+.+-.+ ...+. +|+|.++-+ -
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~-~~-~~pviv~~v~~~~~a~---~a~~~Gad~I~vg~~-~ 225 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-GHSTRIIELIKKIKTK-YP-NLDLIAGNIVTKEAAL---DLISVGADCLKVGIG-P 225 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHH-CT-TCEEEEEEECSHHHHH---HHHTTTCSEEEECSS-C
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHH-CC-CCeEEEcCCCcHHHHH---HHHhcCCCEEEECCC-C
Confidence 3466677888999999987 44 3334444444444322 12 467775 566654333 33333 899999421 1
Q ss_pred cc--------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 360 GA--------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 360 g~--------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
|. ..+.+. ......+.+.+...+.|||.+.-+ - .-.|+..++..|+|++++.
T Consensus 226 G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI---------~---~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 226 GSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGI---------R---FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp STTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCC---------C---SHHHHHHHHHHTCSEEEEC
T ss_pred CcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCC---------C---CHHHHHHHHHcCCCHHhhC
Confidence 11 012222 233344555555568999876332 2 2467889999999999984
No 81
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=83.08 E-value=9.8 Score=38.79 Aligned_cols=160 Identities=14% Similarity=0.123 Sum_probs=95.8
Q ss_pred CCCccCHhhhHHhH-hcCCCEEEEc-CCCC-----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCE
Q 007936 280 TISPKDWLDIDFGI-TEGVDFIAIS-FVKS-----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDG 351 (584)
Q Consensus 280 ~lt~kD~~dI~~al-~~gvD~I~lS-fV~s-----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDG 351 (584)
.++..|+..|...+ +.|+|+|=+. |+.. -.|..++.+.+. . ..++.+.+-..+.++ ++..++. .|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~--~-~~~~~~~~l~~~~~~---i~~a~~~g~~~ 97 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGID--R-EKGVTYAALVPNQRG---LENALEGGINE 97 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSC--C-CTTCEEEEECCSHHH---HHHHHHHTCSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhh--h-cCCCeEEEEeCCHHh---HHHHHhCCcCE
Confidence 35667777766554 5899999875 4332 134444444442 1 235666665554443 4444443 675
Q ss_pred E--EEeCCcc----cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeec
Q 007936 352 A--MVARGDL----GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLS 424 (584)
Q Consensus 352 I--mIaRGDL----g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs 424 (584)
| +++-.|+ -.....++.....+.+++.++++|+.|-..=-+--+.....+-+...+.+++. +...|+|.+.|.
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 4 4444443 22334456677778899999999999853200000000111234556666665 467899999998
Q ss_pred CCCCCCCChHHHHHHHHHHHHH
Q 007936 425 GESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 425 ~ETa~G~yPveaV~~m~~I~~~ 446 (584)
+|.=.-.|.++-+.++.+..+
T Consensus 178 -DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 178 -DTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp -CSSCCCCHHHHHHHHHHHHTT
T ss_pred -CCCCCcCHHHHHHHHHHHHHh
Confidence 787778999999888887643
No 82
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=82.97 E-value=6.6 Score=40.02 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=47.0
Q ss_pred CCceEEEeecCHHHHhcHHHHHHh-----CCEEEEeCCccccc----------CC-CC--ChHHHHHHHHHHHH-Hc--C
Q 007936 325 SDIAVIAKIESIDSLKNLEEIILA-----SDGAMVARGDLGAQ----------IP-LE--QVPSAQQKIVQLCR-QL--N 383 (584)
Q Consensus 325 ~~i~IiAKIEt~~av~NldeIl~~-----sDGImIaRGDLg~e----------i~-~e--~V~~~Qk~II~~c~-~~--g 383 (584)
.+..|+.||=.-...+++.++++. +|+|.+.-+-.+.+ .+ +. .+....-..+...+ .. +
T Consensus 210 ~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ 289 (336)
T 1f76_A 210 KYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGR 289 (336)
T ss_dssp SCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTS
T ss_pred ccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCC
Confidence 457899998321111233333322 79999853211111 10 11 11122323444443 44 7
Q ss_pred CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 384 KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 384 KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.|||...-+ - ...|+..++..|||+|++.
T Consensus 290 ipVi~~GGI---------~---~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 290 LPIIGVGGI---------D---SVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp SCEEEESSC---------C---SHHHHHHHHHHTCSEEEES
T ss_pred CCEEEECCC---------C---CHHHHHHHHHCCCCEEEee
Confidence 899976432 2 3457788888999999997
No 83
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=82.93 E-value=3.9 Score=41.27 Aligned_cols=160 Identities=14% Similarity=0.080 Sum_probs=93.4
Q ss_pred CCccCHhhhH-HhHhcCCCEEEEcC-CCCH-----HHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEE
Q 007936 281 ISPKDWLDID-FGITEGVDFIAISF-VKSA-----EVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGA 352 (584)
Q Consensus 281 lt~kD~~dI~-~al~~gvD~I~lSf-V~sa-----edV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGI 352 (584)
++..++..|. ...+.|+|+|=+.+ +... .|..++.+.+. .. .++.+.+-+.+.++ ++..++. .|.|
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~--~~-~~~~~~~l~~~~~~---i~~a~~ag~~~v 97 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQ--KF-PGINYPVLTPNLKG---FEAAVAAGAKEV 97 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSC--CC-TTCBCCEECCSHHH---HHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHh--hC-CCCEEEEEcCCHHh---HHHHHHCCCCEE
Confidence 5666666654 44568999987753 3321 35555555553 22 23344344444333 4444444 5754
Q ss_pred EE--eCCcc----cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 353 MV--ARGDL----GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 353 mI--aRGDL----g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
.| +-.|. -.....++.....+.+++.|+++|++|-+..-+-=+-....+-+..++.+++. +...|+|.+.|.
T Consensus 98 ~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 176 (298)
T 2cw6_A 98 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG- 176 (298)
T ss_dssp EEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-
Confidence 44 33332 11234456666778899999999999865321100000111234455666655 567899999998
Q ss_pred CCCCCCChHHHHHHHHHHHHHH
Q 007936 426 ESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~a 447 (584)
+|.=.-.|.+.-+.++.+.++.
T Consensus 177 DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 177 DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp ETTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCCcCHHHHHHHHHHHHHhC
Confidence 6776778999999988887654
No 84
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=82.13 E-value=5 Score=41.98 Aligned_cols=113 Identities=19% Similarity=0.312 Sum_probs=61.5
Q ss_pred HHhHhcCCCEEEEc-------CCC---CHHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 290 DFGITEGVDFIAIS-------FVK---SAEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 290 ~~al~~gvD~I~lS-------fV~---saedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIaRG 357 (584)
+...+.|+|++.+. ++. +.+++.++++.. +++|++| |-|++... ..++. +|+|+|++|
T Consensus 172 ~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-------~~pvi~ggi~t~e~a~---~~~~~Gad~i~vg~G 241 (393)
T 2qr6_A 172 PIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-------DVPVIAGGVNDYTTAL---HMMRTGAVGIIVGGG 241 (393)
T ss_dssp HHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-------SSCEEEECCCSHHHHH---HHHTTTCSEEEESCC
T ss_pred HHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-------CCCEEECCcCCHHHHH---HHHHcCCCEEEECCC
Confidence 34457899998775 222 334555554432 4677774 44544332 22333 899999875
Q ss_pred cccc----cCCCCChHHHHHHHHHHH----HHcC---CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 358 DLGA----QIPLEQVPSAQQKIVQLC----RQLN---KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 358 DLg~----ei~~e~V~~~Qk~II~~c----~~~g---KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
--+. ..+.+ ....-.++.+.| .+.+ .|||.+.-+- .-.|+..++..|||++++..
T Consensus 242 g~~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 242 ENTNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp SCCHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred cccccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 3111 11122 122222333332 2245 8888764322 24688999999999999863
No 85
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=81.43 E-value=13 Score=37.22 Aligned_cols=143 Identities=12% Similarity=0.012 Sum_probs=78.2
Q ss_pred hHHhHhcCCC-EEEEcCC-----------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-----CCE
Q 007936 289 IDFGITEGVD-FIAISFV-----------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-----SDG 351 (584)
Q Consensus 289 I~~al~~gvD-~I~lSfV-----------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-----sDG 351 (584)
++.+.+.|+| +|-+.|- .+.+.+.++.+.++. ..++.|+.||=.--..+++.++++. +|+
T Consensus 112 a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~---~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~ 188 (311)
T 1jub_A 112 LKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT---FFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTY 188 (311)
T ss_dssp HHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT---TCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCE
T ss_pred HHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH---hcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcE
Confidence 3455678999 9988652 266666666666632 1257899998321122233343433 688
Q ss_pred EEEeCCc---cccc-------C----------CCCChHHHHHHHHHHHH-Hc--CCCeEEehhhhHhhhcCCCCChhhHH
Q 007936 352 AMVARGD---LGAQ-------I----------PLEQVPSAQQKIVQLCR-QL--NKPVIVASQLLESMIEYPTPTRAEVA 408 (584)
Q Consensus 352 ImIaRGD---Lg~e-------i----------~~e~V~~~Qk~II~~c~-~~--gKPvivATqmLeSMi~~p~PTrAEv~ 408 (584)
|.+.-.- +.++ + +....+... ..++.++ .. ..|||...- .- ...
T Consensus 189 i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GG---------I~---~~~ 255 (311)
T 1jub_A 189 VNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGG---------IE---TGQ 255 (311)
T ss_dssp EEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESS---------CC---SHH
T ss_pred EEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECC---------CC---CHH
Confidence 8774210 0011 0 111123333 3444444 44 688887643 22 235
Q ss_pred HHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 409 DVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 409 Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
|+..++..|||++++..---. +-| .++.+|....+.|+.
T Consensus 256 da~~~l~~GAd~V~vg~~~l~-~~p----~~~~~i~~~l~~~l~ 294 (311)
T 1jub_A 256 DAFEHLLCGATMLQIGTALHK-EGP----AIFDRIIKELEEIMN 294 (311)
T ss_dssp HHHHHHHHTCSEEEECHHHHH-HCT----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEchHHHh-cCc----HHHHHHHHHHHHHHH
Confidence 667778899999999733221 123 356667766666654
No 86
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=81.20 E-value=3.6 Score=39.43 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=74.3
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceE-EEeecCHHHHhcHHHHHH-hCCEEEEeCCcccccCCC
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAV-IAKIESIDSLKNLEEIIL-ASDGAMVARGDLGAQIPL 365 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~I-iAKIEt~~av~NldeIl~-~sDGImIaRGDLg~ei~~ 365 (584)
.++.+.+.|+|+|.++-.-..+.++++.+.++.. |....+ +.-.-|.+ .+.++.+ -.|.+.+.+|-..-.-|.
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~--g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~ 149 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHIATIAACKKVADEL--NGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGI 149 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHH--TCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTC
T ss_pred HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh--CCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCC
Confidence 3467789999999999877767788888887532 322222 22335653 3444444 378766544422111011
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHH
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSL 445 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~ 445 (584)
.-.+..-++|-+.+ ..+.|+++.-- -.|..+ ..++..|+|++...+--.....|.+++ .+++..+
T Consensus 150 ~~~~~~l~~i~~~~-~~~~pi~v~GG--------I~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 150 GWTTDDLDKMRQLS-ALGIELSITGG--------IVPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp CSCHHHHHHHHHHH-HTTCEEEEESS--------CCGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred cCCHHHHHHHHHHh-CCCCCEEEECC--------CCHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 11122223332222 34677766421 122222 457888999999874433334577777 6655443
No 87
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=80.76 E-value=11 Score=36.39 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=73.4
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCceEEE---------eecCH--------HHHhcHHHH
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIAVIA---------KIESI--------DSLKNLEEI 345 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~IiA---------KIEt~--------~av~NldeI 345 (584)
+.++++.+++.|+|+|.+.- .++++.+.++.+.+.. ..+.+-. ++++. ..++-+.++
T Consensus 86 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~----~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 161 (252)
T 1ka9_F 86 SLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGA----QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKG 161 (252)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG----GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC----CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHH
Confidence 35788888999999999864 5566667777665510 1121111 12221 123444555
Q ss_pred HHh-CCEEEEe-CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 346 ILA-SDGAMVA-RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 346 l~~-sDGImIa-RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
.+. +++|++. ++-=+...+. .+ +.+-+.++..+.|++.. ...-+.. |+......|+|+++.
T Consensus 162 ~~~G~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~---------GGI~~~~---d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 162 VELGAGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIAS---------GGAGRME---HFLEAFQAGAEAALA 224 (252)
T ss_dssp HHHTCCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEE---------SCCCSHH---HHHHHHHTTCSEEEE
T ss_pred HHcCCCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEe---------CCCCCHH---HHHHHHHCCCHHHHH
Confidence 555 7888875 2100122222 22 22223344568999976 3344444 445555679999998
Q ss_pred cCCCCCCC-ChHHHHHH
Q 007936 424 SGESAMGQ-FPDKALTV 439 (584)
Q Consensus 424 s~ETa~G~-yPveaV~~ 439 (584)
..---.+. -|.++++.
T Consensus 225 gsal~~~~~~~~~~~~~ 241 (252)
T 1ka9_F 225 ASVFHFGEIPIPKLKRY 241 (252)
T ss_dssp SHHHHTTSSCHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHH
Confidence 75444455 44444444
No 88
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=80.61 E-value=21 Score=38.17 Aligned_cols=154 Identities=9% Similarity=0.135 Sum_probs=94.2
Q ss_pred CCCccCHhhhHHh-HhcCCCEEEEc-CCCCHHHHHHHHHHHHhhcCCCCceEEEee-cCHHHHhcHHHHHHh-CC--EEE
Q 007936 280 TISPKDWLDIDFG-ITEGVDFIAIS-FVKSAEVINHLKSYIAARSRDSDIAVIAKI-ESIDSLKNLEEIILA-SD--GAM 353 (584)
Q Consensus 280 ~lt~kD~~dI~~a-l~~gvD~I~lS-fV~saedV~~lr~~l~~~~~~~~i~IiAKI-Et~~av~NldeIl~~-sD--GIm 353 (584)
.+|..++..|... .+.|+|.|=+. ..-++.|...++.+.+ .+....+.+.+ .+.+++ +..++. .| .++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~---~~~~~~v~~~~r~~~~di---~~A~~aG~~~V~i~ 130 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICK---LGLKCKILTHIRCHMDDA---RVAVETGVDGVDVV 130 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT---SCCSSEEEEEEESCHHHH---HHHHHTTCSEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHh---cCCCCEEEEeeccChhhH---HHHHHcCCCEEEEE
Confidence 3466777777655 46799999884 4566777777776652 23345555432 233332 333332 56 455
Q ss_pred EeCCcccc----cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCCCC
Q 007936 354 VARGDLGA----QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGESA 428 (584)
Q Consensus 354 IaRGDLg~----ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ETa 428 (584)
++-.|+-. ....+++.......++.|+++|..|.+... + .-+-+...+.+++. +...|+|.+.|. +|.
T Consensus 131 ~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--d----a~r~d~~~~~~v~~~~~~~Ga~~i~l~-DTv 203 (423)
T 3ivs_A 131 IGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--D----SFRSDLVDLLSLYKAVDKIGVNRVGIA-DTV 203 (423)
T ss_dssp EEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--S----GGGSCHHHHHHHHHHHHHHCCSEEEEE-ETT
T ss_pred eeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--c----CcCCCHHHHHHHHHHHHHhCCCccccC-Ccc
Confidence 55555432 234566777778899999999999987521 1 11334444556665 456799999887 788
Q ss_pred CCCChHHHHHHHHHHHHH
Q 007936 429 MGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 429 ~G~yPveaV~~m~~I~~~ 446 (584)
=.-.|.++-+.++.+..+
T Consensus 204 G~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 204 GCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp SCCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhh
Confidence 888899988888777643
No 89
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=80.33 E-value=15 Score=35.01 Aligned_cols=102 Identities=19% Similarity=0.140 Sum_probs=64.5
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIP 364 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~ 364 (584)
.+.++.+++.|+++|=+.+ +++...+.++... . .+..+-+-. .---+.++.-+++ +|++..+-.|
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~---~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d------ 93 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKALR---K--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL------ 93 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHT---T--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHh---C--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC------
Confidence 3445667889999999986 5555554444433 2 334444433 1112455555555 8999865322
Q ss_pred CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 365 LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
..+++.|++.|.|++.-+ -| .+++..|...|+|.+.+
T Consensus 94 --------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 --------EEVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKF 130 (207)
T ss_dssp --------HHHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred --------HHHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEE
Confidence 267889999999988531 12 34457788899999988
No 90
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=80.05 E-value=17 Score=34.71 Aligned_cols=112 Identities=20% Similarity=0.224 Sum_probs=66.2
Q ss_pred HhhhHHhHhcCCCEEEEc-----CCCC----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 286 WLDIDFGITEGVDFIAIS-----FVKS----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lS-----fV~s----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIa 355 (584)
.++++.+.+.|+|+|-+- |+.+ .+.++++++.+ +..+.+..++..++ +.++...++ +|+|.+.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-----~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh 98 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-----DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVH 98 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-----CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-----CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEE
Confidence 345677788999988773 5554 45555554332 33456667887643 456666665 8999886
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
-... +.+.. ...++.|++.|+.++++.. |. |..|. ..++..++|.+++.
T Consensus 99 ~~~~----~~~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 99 CEQS----STIHL----HRTINQIKSLGAKAGVVLN--------PG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp CSTT----TCSCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGGG---GTTTTTTCSEEEEE
T ss_pred ecCc----cchhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHHH---HHHHHhhCCEEEEE
Confidence 2100 11222 4677888888999888731 11 11221 23445789988554
No 91
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=79.26 E-value=13 Score=39.31 Aligned_cols=113 Identities=15% Similarity=0.160 Sum_probs=79.6
Q ss_pred HhhhHHhHhcCCCEEEEcCCC-----------CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE
Q 007936 286 WLDIDFGITEGVDFIAISFVK-----------SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV 354 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~-----------saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI 354 (584)
.+.++.+.+.|+|+|...--. ..+.++.++++.+. ..+.+++-+-....++-+. +.+|.+-|
T Consensus 159 ~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~----~Gl~~~te~~d~~~~~~l~---~~vd~lkI 231 (385)
T 3nvt_A 159 AAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE----YGLGVISEIVTPADIEVAL---DYVDVIQI 231 (385)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH----HTCEEEEECCSGGGHHHHT---TTCSEEEE
T ss_pred HHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH----cCCEEEEecCCHHHHHHHH---hhCCEEEE
Confidence 334456667899988654211 25778888888743 2478999888777766554 45899999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc-ccceEeec
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ-RADALMLS 424 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~-G~D~imLs 424 (584)
|-+++.- ..+++.+.+.||||++.|.|. .|-.|+...++.+.. |.+=++|.
T Consensus 232 gs~~~~n-----------~~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 232 GARNMQN-----------FELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp CGGGTTC-----------HHHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CcccccC-----------HHHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 9777632 256777888999999987542 777888888887764 77555554
No 92
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=79.25 E-value=14 Score=35.93 Aligned_cols=103 Identities=19% Similarity=0.241 Sum_probs=66.2
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
+.++.+++.|++.|=+.+ ++....+.++++.+ ... ++.+-+-. .---+..+.-+++ +|+++.+-.|
T Consensus 33 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~--~~~-~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d------- 99 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITF-RSEAAADAIRLLRA--NRP-DFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN------- 99 (224)
T ss_dssp HHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHH--HCT-TCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC-------
T ss_pred HHHHHHHHcCCCEEEEec-cCchHHHHHHHHHH--hCc-CcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC-------
Confidence 445677899999999996 55666665655542 222 34444432 2122455555555 8999765333
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
..+++.|++.|+|++.-+ -| .+++..|...|+|.+.+
T Consensus 100 -------~~v~~~ar~~g~~~i~Gv-----------~t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -------PKIVKLCQDLNFPITPGV-----------NN---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp -------HHHHHHHHHTTCCEECEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEecc-----------CC---HHHHHHHHHCCCCEEEE
Confidence 457889999999987531 22 23457788999999998
No 93
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=78.53 E-value=22 Score=38.04 Aligned_cols=125 Identities=16% Similarity=0.193 Sum_probs=74.5
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCc--cc
Q 007936 284 KDWLDIDFGITEGVDFIAISFVK-SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGD--LG 360 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGD--Lg 360 (584)
...+.+.++++.|+|.|++.... ..+...+....+... ...-+.+...+-+.+....+.+ .-+|+|.++-|- ..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-~p~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-FPNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPGSIC 309 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-CSSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTTB
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-CCCCcEeCCCccCHHHHHHHHH--cCCCEEEECccCCcce
Confidence 34677889999999999988642 122222222223211 1122334456666655543322 228999997531 00
Q ss_pred c-----cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 361 A-----QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 361 ~-----ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
. ..+.+ .....+++...|+..+.|+|...-+- -..|+..++..|+|++++.
T Consensus 310 ~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred EEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeC
Confidence 0 11122 34455677788888899999764321 3468899999999999994
No 94
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=78.39 E-value=5.3 Score=39.10 Aligned_cols=130 Identities=12% Similarity=0.075 Sum_probs=76.3
Q ss_pred CCEEEEcCCCCHHHHHHHHH---HHHhhcCCCCceEEEeecCHHHHhcHHHHHH--hCCEEEEeCCcccccCCCCChHHH
Q 007936 297 VDFIAISFVKSAEVINHLKS---YIAARSRDSDIAVIAKIESIDSLKNLEEIIL--ASDGAMVARGDLGAQIPLEQVPSA 371 (584)
Q Consensus 297 vD~I~lSfV~saedV~~lr~---~l~~~~~~~~i~IiAKIEt~~av~NldeIl~--~sDGImIaRGDLg~ei~~e~V~~~ 371 (584)
+|+|.+-.-.+.+++.++.+ .+ ++.|..+.+-.+-.|+ ++.+++++. ..|.|++-.-+-|.. +..-.+..
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i--~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~ 160 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEI--RDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDM 160 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHH--HTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGG
T ss_pred CCEEEEeecCCccCHHHHHHHHHHH--HHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHH
Confidence 99998876655435666666 66 3455545554444554 777899999 799998865443332 21112222
Q ss_pred HHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHH
Q 007936 372 QQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 372 Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~ 444 (584)
-++|-+..+.. +.++.+.-- =+. ..+..++..|+|.+...+--.....|.++++.|++..
T Consensus 161 l~ki~~lr~~~~~~~I~VdGG----------I~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~ 221 (227)
T 1tqx_A 161 MGKVSFLRKKYKNLNIQVDGG----------LNI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSV 221 (227)
T ss_dssp HHHHHHHHHHCTTCEEEEESS----------CCH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEECC----------CCH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 22332222222 555555421 111 2446677789999998643333346999999887644
No 95
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=78.09 E-value=16 Score=35.12 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=65.8
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
+.++.+++.|++.|=+.+ ++....+.++.+.+ ... +..+-+-. .---+..+.-+++ +|++..+--|
T Consensus 32 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~--~~~-~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d------- 98 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTL-RTECAVDAIRAIAK--EVP-EAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT------- 98 (214)
T ss_dssp HHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHH--HCT-TSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC-------
T ss_pred HHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHH--HCc-CCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC-------
Confidence 445677899999999996 55555555554442 222 34444432 1112455555555 8999865322
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
..+++.|+++|.|++.-+ -| .+++..|...|+|.+.+
T Consensus 99 -------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368899999999988531 22 33457888999999988
No 96
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=77.56 E-value=15 Score=36.96 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=75.2
Q ss_pred hhhHHhHhcCCCEE-EEc-------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCE
Q 007936 287 LDIDFGITEGVDFI-AIS-------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDG 351 (584)
Q Consensus 287 ~dI~~al~~gvD~I-~lS-------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDG 351 (584)
+.++.+.+.|+|+| .+- ..++++.++++++.. +++++.|+=.-. ++..+...+. +|+
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-------~iPv~~k~r~g~-~~~~~~~~a~GAd~ 103 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-------SIPVMAKARIGH-IVEARVLEAMGVDY 103 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-------SSCEEEEECTTC-HHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-------CCCEEecccccc-hHHHHHHHHCCCCE
Confidence 45667788999999 442 233667777765432 467888764310 2223333334 899
Q ss_pred EEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCC
Q 007936 352 AMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQ 431 (584)
Q Consensus 352 ImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~ 431 (584)
|. +..++. .+++ .+++. |++.|.|+++.+. + ..+...++..|+|.+.++||+..|
T Consensus 104 V~-~~~~l~----~~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g- 158 (305)
T 2nv1_A 104 ID-ESEVLT----PADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG- 158 (305)
T ss_dssp EE-ECTTSC----CSCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-
T ss_pred EE-EeccCC----HHHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-
Confidence 96 444442 2221 11223 5577999887642 2 234566678999999999998777
Q ss_pred ChHHHHHHHHHH
Q 007936 432 FPDKALTVLRSV 443 (584)
Q Consensus 432 yPveaV~~m~~I 443 (584)
-..+++...+.+
T Consensus 159 ~~~~~~~h~rt~ 170 (305)
T 2nv1_A 159 NIVEAVRHMRKV 170 (305)
T ss_dssp CTHHHHHHHHHH
T ss_pred chHHHHhhhhhh
Confidence 556666665553
No 97
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=77.07 E-value=10 Score=37.39 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=84.6
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhc-------HHHHHHh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKN-------LEEIILA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~N-------ldeIl~~-s 349 (584)
|.-|..|.+.+ +.+.+.|++.|+++ +..+ .+++.++.. . .+++.+-|=-+.|-.+ .++-++. +
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~--~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GA 102 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEK--L-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGA 102 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHH--H-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCC--C-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 44455555444 56778999999975 4556 666666421 0 3677776633333222 2222222 6
Q ss_pred CEEEE--eCCcccccCCCCChHHHHHHHHHHHHHcCCCe--EEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeec
Q 007936 350 DGAMV--ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPV--IVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLS 424 (584)
Q Consensus 350 DGImI--aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPv--ivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs 424 (584)
|.|=+ ..|.|- +.+..-.+.+.+.|...|+|+ |+-|-.| |..|+..... +...|+|.|=-|
T Consensus 103 dEID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKTs 168 (234)
T 1n7k_A 103 TELDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKTS 168 (234)
T ss_dssp CEEEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEESC
T ss_pred CEEEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEeC
Confidence 75532 233321 155555667888898888997 7665433 5677766665 778899998654
Q ss_pred CCCCCCCCh-----HHHHHH--HHHHH
Q 007936 425 GESAMGQFP-----DKALTV--LRSVS 444 (584)
Q Consensus 425 ~ETa~G~yP-----veaV~~--m~~I~ 444 (584)
.|..| ++.|+. |++++
T Consensus 169 ----TG~~~~~gAt~~dv~l~~m~~~v 191 (234)
T 1n7k_A 169 ----TGVYTKGGDPVTVFRLASLAKPL 191 (234)
T ss_dssp ----CSSSCCCCSHHHHHHHHHHHGGG
T ss_pred ----CCCCCCCCCCHHHHHHHHHHHHH
Confidence 66665 788888 76554
No 98
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=76.95 E-value=16 Score=36.24 Aligned_cols=143 Identities=17% Similarity=0.218 Sum_probs=75.3
Q ss_pred CHhhhHHhHh--cCCCEEEEcCC------------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH---
Q 007936 285 DWLDIDFGIT--EGVDFIAISFV------------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL--- 347 (584)
Q Consensus 285 D~~dI~~al~--~gvD~I~lSfV------------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~--- 347 (584)
+.......+. .|+|+|-+.|- .+++.+.++.+.++.. . ++.|+.|+=- .+.++.++++
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~--~~pv~vk~~~--~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-S--KVPLYVKLSP--NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-C--SSCEEEEECS--CSSCSHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-c--CCCEEEEECC--ChHHHHHHHHHHH
Confidence 3333333344 89999877542 3455556665555422 1 4688888731 2234444332
Q ss_pred -h-CCEEEEeCCccccc-----------------CCCCChHHHHHHHHHHH-HHcCCCeEEehhhhHhhhcCCCCChhhH
Q 007936 348 -A-SDGAMVARGDLGAQ-----------------IPLEQVPSAQQKIVQLC-RQLNKPVIVASQLLESMIEYPTPTRAEV 407 (584)
Q Consensus 348 -~-sDGImIaRGDLg~e-----------------i~~e~V~~~Qk~II~~c-~~~gKPvivATqmLeSMi~~p~PTrAEv 407 (584)
. +|+|.+.-+..+.. .+....+. .-..++.+ +..+.|+|.+.- .-+ .
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~-~~~~i~~i~~~~~ipvia~GG---------I~~---~ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPV-ALKLIHQVAQDVDIPIIGMGG---------VAN---A 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHH-HHHHHHHHHTTCSSCEEECSS---------CCS---H
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHH-HHHHHHHHHHhcCCCEEEECC---------cCC---H
Confidence 2 79999832111110 01112222 22344434 344899987643 222 3
Q ss_pred HHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 007936 408 ADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWW 451 (584)
Q Consensus 408 ~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 451 (584)
.|+..++..|+|++++..---.+. .++.++.+..+.|+
T Consensus 254 ~d~~~~l~~GAd~V~vg~~~l~~p------~~~~~i~~~l~~~~ 291 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTANFADP------FVCPKIIDKLPELM 291 (311)
T ss_dssp HHHHHHHHHTCSEEEECTHHHHCT------THHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHcCc------HHHHHHHHHHHHHH
Confidence 467788888999999874322232 24555555555544
No 99
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=76.51 E-value=20 Score=34.50 Aligned_cols=135 Identities=15% Similarity=0.100 Sum_probs=70.5
Q ss_pred cCHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCC-Cc--eEEE-------eecCH--------HHHhcHH
Q 007936 284 KDWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDS-DI--AVIA-------KIESI--------DSLKNLE 343 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~-~i--~IiA-------KIEt~--------~av~Nld 343 (584)
.+.++++.+++.|+|.|.+.- ..+++.+.++.+.+ +. .+ .+=+ ++++. ..++-+.
T Consensus 84 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~-----g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~ 158 (253)
T 1thf_D 84 HDFETASELILRGADKVSINTAAVENPSLITQIAQTF-----GSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVV 158 (253)
T ss_dssp CSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH-----CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc-----CCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHH
Confidence 345778888999999998864 34455566655554 11 11 1112 12221 1233445
Q ss_pred HHHHh-CCEEEEe-CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE
Q 007936 344 EIILA-SDGAMVA-RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL 421 (584)
Q Consensus 344 eIl~~-sDGImIa-RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i 421 (584)
++.+. +|.|++- +.-=+...++ .+ ..-+++ +...+.|++... ..-+.+ |+..+...|+|++
T Consensus 159 ~~~~~G~~~i~~~~~~~~g~~~g~-~~-~~~~~l---~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv 221 (253)
T 1thf_D 159 EVEKRGAGEILLTSIDRDGTKSGY-DT-EMIRFV---RPLTTLPIIASG---------GAGKME---HFLEAFLAGADAA 221 (253)
T ss_dssp HHHHTTCSEEEEEETTTTTSCSCC-CH-HHHHHH---GGGCCSCEEEES---------CCCSHH---HHHHHHHTTCSEE
T ss_pred HHHHCCCCEEEEEeccCCCCCCCC-CH-HHHHHH---HHhcCCCEEEEC---------CCCCHH---HHHHHHHcCChHH
Confidence 55555 6888874 1110111222 22 122222 234589998763 344444 4455556899999
Q ss_pred eecCCCCCCC-ChHHHHHHH
Q 007936 422 MLSGESAMGQ-FPDKALTVL 440 (584)
Q Consensus 422 mLs~ETa~G~-yPveaV~~m 440 (584)
+...---.+. -|.++++.+
T Consensus 222 ~vGsal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 222 LAASVFHFREIDVRELKEYL 241 (253)
T ss_dssp EESHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHH
Confidence 9863333343 455555543
No 100
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=76.46 E-value=26 Score=37.89 Aligned_cols=122 Identities=16% Similarity=0.121 Sum_probs=73.5
Q ss_pred HhhhHHhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhhcCCCCce-EEEeecCHHHHhcHHHHHHhCCEEEEeCCcccc-
Q 007936 286 WLDIDFGITEGVDFIAISFV--KSAEVINHLKSYIAARSRDSDIA-VIAKIESIDSLKNLEEIILASDGAMVARGDLGA- 361 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV--~saedV~~lr~~l~~~~~~~~i~-IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~- 361 (584)
.+.++...+.|++.+.+..- .+...+..+ +.++... ..++. ++..+.|.+..+.+.+. -+|+|.+|-|-=+.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~-~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g~~~ 319 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKY-GDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGGSIC 319 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHH-GGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCSTTC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhC-CCCceEeeccccCHHHHHHHHHh--CCCeEEecccCCcCc
Confidence 44466778889999887322 222222222 3332211 11134 45678888877655432 38999987632111
Q ss_pred ------cCCCCChHHHHHHHHHHHHHc------CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 362 ------QIPLEQVPSAQQKIVQLCRQL------NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 362 ------ei~~e~V~~~Qk~II~~c~~~------gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
..+.+ -..+...+.+.|++. +.|||.+.-+. --.|++.|+..|||++|+.
T Consensus 320 ~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 320 ITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp CSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11223 234556777788877 89999764332 2468899999999999996
No 101
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=76.44 E-value=36 Score=32.61 Aligned_cols=120 Identities=14% Similarity=0.092 Sum_probs=68.2
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEE-E-eC-Cccccc
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAM-V-AR-GDLGAQ 362 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGIm-I-aR-GDLg~e 362 (584)
.++++.+++.|+|+|.++.. ..++..++.+.++. .+ ..++.-+......+.+..+...+|+++ + .+ |-.|..
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~--~g--~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~ 172 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIARE--EG--IKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAR 172 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHH--HT--CEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC------
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHH--hC--CCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCC
Confidence 45778889999999999854 44677777777743 23 344555543334455667776788433 2 22 222222
Q ss_pred CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 363 IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 363 i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
-+. -+...+.+-+.+...+.|+++.. ..-+ ..++..+...|+|++.+.
T Consensus 173 ~~~--~~~~~~~i~~l~~~~~~pi~~~G---------GI~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 173 EEI--PKTAYDLLRRAKRICRNKVAVGF---------GVSK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp -CC--CHHHHHHHHHHHHHCSSCEEEES---------CCCS---HHHHHHHHHTTCSEEEEC
T ss_pred CCC--ChhHHHHHHHHHhhcCCCEEEEe---------ecCC---HHHHHHHHHcCCCEEEEc
Confidence 111 13333344344444589988763 2222 245566667899999975
No 102
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=76.43 E-value=44 Score=31.33 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=67.9
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH-hCCEEEEeCC---cc----c
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL-ASDGAMVARG---DL----G 360 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~-~sDGImIaRG---DL----g 360 (584)
++.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +.+..+ -+|.+++++- .- +
T Consensus 87 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~-----g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~ 155 (227)
T 2tps_A 87 VELALNLKADGIHIGQED--ANAKEVRAAI-----GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTR 155 (227)
T ss_dssp HHHHHHHTCSEEEECTTS--SCHHHHHHHH-----TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCC
T ss_pred HHHHHHcCCCEEEECCCc--cCHHHHHHhc-----CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCC
Confidence 356788999999986543 2356665544 22 222222345433 222222 2899998542 11 1
Q ss_pred ccCCCCChHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 361 AQIPLEQVPSAQQKIVQLCRQLN-KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 361 ~ei~~e~V~~~Qk~II~~c~~~g-KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
...+++.+ -+.+...+ +|++.+.- -+. .++..+...|+|++.++.--...+.|.++++-
T Consensus 156 ~~~~~~~l-------~~~~~~~~~~pvia~GG----------I~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~ 215 (227)
T 2tps_A 156 AVQGVSLI-------EAVRRQGISIPIVGIGG----------ITI---DNAAPVIQAGADGVSMISAISQAEDPESAARK 215 (227)
T ss_dssp CCCTTHHH-------HHHHHTTCCCCEEEESS----------CCT---TTSHHHHHTTCSEEEESHHHHTSSCHHHHHHH
T ss_pred CccCHHHH-------HHHHHhCCCCCEEEEcC----------CCH---HHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHH
Confidence 22222222 12233345 89988642 122 23455666799999997654444678777766
Q ss_pred HHHHHH
Q 007936 440 LRSVSL 445 (584)
Q Consensus 440 m~~I~~ 445 (584)
+.+.++
T Consensus 216 ~~~~~~ 221 (227)
T 2tps_A 216 FREEIQ 221 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 103
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=76.35 E-value=20 Score=34.83 Aligned_cols=103 Identities=11% Similarity=0.095 Sum_probs=64.8
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
+.++.+++.|++.|=+.+ ++....+.++.+.+ .. .++.+-+-. .---+..+.-+++ +|++..+--|
T Consensus 42 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~--~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d------- 108 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTL-RSQHGLKAIQVLRE--QR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT------- 108 (225)
T ss_dssp HHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHH--HC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC-------
T ss_pred HHHHHHHHCCCCEEEEec-CCccHHHHHHHHHH--hC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC-------
Confidence 445677899999999986 55555555554442 22 234544432 2111444444444 8999854222
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
..+++.|+++|.|.+.-+ -| .+++..|...|+|.+.+
T Consensus 109 -------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 -------EDILEAGVDSEIPLLPGI-----------ST---PSEIMMGYALGYRRFKL 145 (225)
T ss_dssp -------HHHHHHHHHCSSCEECEE-----------CS---HHHHHHHHTTTCCEEEE
T ss_pred -------HHHHHHHHHhCCCEEEee-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368899999999987421 12 24458888999999988
No 104
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=75.84 E-value=31 Score=34.30 Aligned_cols=126 Identities=10% Similarity=0.164 Sum_probs=82.3
Q ss_pred HhhhHHhHhcCCCEEEEcCCC--C---------HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE
Q 007936 286 WLDIDFGITEGVDFIAISFVK--S---------AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV 354 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~--s---------aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI 354 (584)
.+.++.+.+.|+|.|....-+ + .+.++.+++++++. .+.+++-+-....++-+.+. +|.+-|
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~----Gl~~~te~~d~~~~~~l~~~---vd~~kI 112 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY----GLVTVTEVMDTRHVELVAKY---SDILQI 112 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH----TCEEEEECCCGGGHHHHHHH---CSEEEE
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc----CCcEEEeeCCHHhHHHHHhh---CCEEEE
Confidence 445566677888887765432 1 78889999988432 47899988888877666654 799999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc-ccceEee--cCCCCCCC
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ-RADALML--SGESAMGQ 431 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~-G~D~imL--s~ETa~G~ 431 (584)
|-+++. +..+++.+-+.||||++.|.| .+|-.|+.+.+..+.. |.+-++| .|=+..-.
T Consensus 113 ga~~~~-----------n~~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~ 173 (262)
T 1zco_A 113 GARNSQ-----------NFELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFET 173 (262)
T ss_dssp CGGGTT-----------CHHHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCC
T ss_pred Cccccc-----------CHHHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC
Confidence 977652 222345555689999997532 2577888777776654 5533333 33233336
Q ss_pred ChHHHH
Q 007936 432 FPDKAL 437 (584)
Q Consensus 432 yPveaV 437 (584)
||.+.+
T Consensus 174 y~~~~v 179 (262)
T 1zco_A 174 ATRFTL 179 (262)
T ss_dssp SSSSBC
T ss_pred cChhhc
Confidence 776543
No 105
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=75.52 E-value=11 Score=35.91 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=74.0
Q ss_pred hhhHHhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEe---CCcccc
Q 007936 287 LDIDFGITEGVDFIAISFV--KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVA---RGDLGA 361 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV--~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIa---RGDLg~ 361 (584)
..++.+.+.|+|+|.+..- .+ ++..++.+.++ +.+ ..++.-+-+..-.+.+.++...+|.|++. +|--|.
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~--~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~ 156 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIK--SLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQ 156 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHH--HTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHH--HcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCc
Confidence 4677788999999988876 54 34445555553 223 34444442112233455555668977433 342233
Q ss_pred cCCCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHH
Q 007936 362 QIPLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTV 439 (584)
Q Consensus 362 ei~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~ 439 (584)
.... .....-+++-+.+.+. +.|+++.-- -.|. .+..++..|+|++..++--.....|.++++.
T Consensus 157 ~~~~-~~~~~i~~l~~~~~~~~~~~pi~v~GG--------I~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~ 222 (230)
T 1rpx_A 157 SFIE-SQVKKISDLRKICAERGLNPWIEVDGG--------VGPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKG 222 (230)
T ss_dssp CCCT-THHHHHHHHHHHHHHHTCCCEEEEESS--------CCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred cccH-HHHHHHHHHHHHHHhcCCCceEEEECC--------CCHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHH
Confidence 3332 2222223333333322 577766532 2332 3355666799999997654445568888776
Q ss_pred HH
Q 007936 440 LR 441 (584)
Q Consensus 440 m~ 441 (584)
++
T Consensus 223 l~ 224 (230)
T 1rpx_A 223 IK 224 (230)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 106
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.26 E-value=45 Score=34.22 Aligned_cols=150 Identities=12% Similarity=0.085 Sum_probs=91.8
Q ss_pred CCCccCHhhhHHh-HhcCCCEEEE-----cCCCC-------HHHHHHHHHHHHhhcCCCCceEEEee-cCHHHHhcHHHH
Q 007936 280 TISPKDWLDIDFG-ITEGVDFIAI-----SFVKS-------AEVINHLKSYIAARSRDSDIAVIAKI-ESIDSLKNLEEI 345 (584)
Q Consensus 280 ~lt~kD~~dI~~a-l~~gvD~I~l-----SfV~s-------aedV~~lr~~l~~~~~~~~i~IiAKI-Et~~av~NldeI 345 (584)
.++..++..|..+ .+.|+|.|=+ ++.-| +.+.+.++.+.+ ...++++.+.. =...-.+.++..
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~---~~~~~~i~~l~~p~~~~~~~i~~a 102 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG---EISHAQIATLLLPGIGSVHDLKNA 102 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT---TCSSSEEEEEECBTTBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh---hCCCCEEEEEecCCcccHHHHHHH
Confidence 3566666666554 4689999999 44322 345555555542 12356776662 211113345555
Q ss_pred HHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEee
Q 007936 346 ILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALML 423 (584)
Q Consensus 346 l~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imL 423 (584)
.+. +|++.|. ++..++ ...+..++.|+++|+.+++.- ...++-+...+.+++. +...|+|.|-|
T Consensus 103 ~~aGvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 103 YQAGARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHHTCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 544 7998874 233322 234678889999999988761 1223445566777777 45567999999
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHH
Q 007936 424 SGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 424 s~ETa~G~yPveaV~~m~~I~~~a 447 (584)
.+=|-. ..|.++-+.++.+.+..
T Consensus 169 ~DT~G~-~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 169 ADSGGA-MSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp ECTTCC-CCHHHHHHHHHHHHHHS
T ss_pred CCCcCc-cCHHHHHHHHHHHHHhc
Confidence 754444 45998888888876654
No 107
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=74.14 E-value=25 Score=33.34 Aligned_cols=134 Identities=7% Similarity=0.013 Sum_probs=75.0
Q ss_pred HhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHhCCEEEEeCCcccccCCCCC
Q 007936 291 FGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILASDGAMVARGDLGAQIPLEQ 367 (584)
Q Consensus 291 ~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~sDGImIaRGDLg~ei~~e~ 367 (584)
.+.+.|+|+|.+..--..+.++.+.+.++. .|. ++...+= |....+.++++ . .+-+.+.++-++.+.|...
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~--~g~--~~~~~ll~~~t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g 148 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKE--FNG--DVQIELTGYWTWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAW 148 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHH--TTC--EEEEEECSCCCHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCC
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHH--cCC--CceeeeeeCCChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCC
Confidence 567899999999876666668888888743 333 3322111 12333444443 2 4445555555555555543
Q ss_pred hHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHH
Q 007936 368 VPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 368 V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~ 444 (584)
.+.--+.+-+.+ ..+.|+++.-- -.|.. +..++..|+|.+....--.....|.++++.+++.+
T Consensus 149 ~~~~i~~lr~~~-~~~~~i~v~GG--------I~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i 211 (216)
T 1q6o_A 149 GEADITAIKRLS-DMGFKVTVTGG--------LALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSI 211 (216)
T ss_dssp CHHHHHHHHHHH-HTTCEEEEESS--------CCGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc-CCCCcEEEECC--------cChhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHH
Confidence 222223333333 22455665421 12222 35677889999988644333446989888877654
No 108
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=74.12 E-value=18 Score=33.64 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=60.1
Q ss_pred HHhHhcCCCEEEEcCCC-C-HHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCC
Q 007936 290 DFGITEGVDFIAISFVK-S-AEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~-s-aedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
+...+.|+|+|-+.+-. . .+.++++|+.+. .+..|-+ .+.+++- .++..+. +|.| ++++- +
T Consensus 29 ~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~-----~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~-----~- 93 (205)
T 1wa3_A 29 LAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL-----D- 93 (205)
T ss_dssp HHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC-----C-
T ss_pred HHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-----CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC-----C-
Confidence 34457799999775422 2 223666666551 2233333 3455443 3333333 8999 77651 1
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
..+++.|++.|+|++.- ..|. +++..++..|+|.+-+.
T Consensus 94 -------~~~~~~~~~~g~~vi~g-----------~~t~---~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 94 -------EEISQFCKEKGVFYMPG-----------VMTP---TELVKAMKLGHTILKLF 131 (205)
T ss_dssp -------HHHHHHHHHHTCEEECE-----------ECSH---HHHHHHHHTTCCEEEET
T ss_pred -------HHHHHHHHHcCCcEECC-----------cCCH---HHHHHHHHcCCCEEEEc
Confidence 46889999999999852 1233 34677899999998764
No 109
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=74.09 E-value=32 Score=32.71 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=69.6
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCC--------HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEE---
Q 007936 285 DWLDIDFGITEGVDFIAISFVKS--------AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGA--- 352 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~s--------aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGI--- 352 (584)
+.+.++.+++.|+|+|.+..... .+.++.+++.. .+..++..+.|.+-. ....+. +|.|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~------~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~ 160 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY------PNQLLMADISTFDEG---LVAHQAGIDFVGTT 160 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC------TTCEEEEECSSHHHH---HHHHHTTCSEEECT
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC------CCCeEEEeCCCHHHH---HHHHHcCCCEEeee
Confidence 46778889999999998865432 23344444432 246788877775442 222222 7887
Q ss_pred EEeC--CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCC
Q 007936 353 MVAR--GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMG 430 (584)
Q Consensus 353 mIaR--GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G 430 (584)
+.+. +..+ .....+..+ ++ .+.. +.|++..- ..-|.. |+..++..|+|++++.. ++=
T Consensus 161 v~g~~~~~~~--~~~~~~~~i-~~---~~~~-~ipvia~G---------GI~s~~---~~~~~~~~Gad~v~vGs--al~ 219 (234)
T 1yxy_A 161 LSGYTPYSRQ--EAGPDVALI-EA---LCKA-GIAVIAEG---------KIHSPE---EAKKINDLGVAGIVVGG--AIT 219 (234)
T ss_dssp TTTSSTTSCC--SSSCCHHHH-HH---HHHT-TCCEEEES---------CCCSHH---HHHHHHTTCCSEEEECH--HHH
T ss_pred ccccCCCCcC--CCCCCHHHH-HH---HHhC-CCCEEEEC---------CCCCHH---HHHHHHHCCCCEEEEch--HHh
Confidence 2232 2211 111232221 22 2333 89998763 333333 55566677999999864 222
Q ss_pred CChHHHHHHHHH
Q 007936 431 QFPDKALTVLRS 442 (584)
Q Consensus 431 ~yPveaV~~m~~ 442 (584)
+ |.++++.+.+
T Consensus 220 ~-p~~~~~~l~~ 230 (234)
T 1yxy_A 220 R-PKEIAERFIE 230 (234)
T ss_dssp C-HHHHHHHHHH
T ss_pred C-hHHHHHHHHH
Confidence 2 7666666544
No 110
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=73.99 E-value=47 Score=34.62 Aligned_cols=119 Identities=15% Similarity=0.289 Sum_probs=83.6
Q ss_pred HhhhHHhHhcCCCEEEEc--------------CC----------------CCHHHHHHHHHHHHhhcCCCCceEEEeecC
Q 007936 286 WLDIDFGITEGVDFIAIS--------------FV----------------KSAEVINHLKSYIAARSRDSDIAVIAKIES 335 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lS--------------fV----------------~saedV~~lr~~l~~~~~~~~i~IiAKIEt 335 (584)
++-++.+.+.|+|.|=+- |- -+.++.+.++++.+. ..+.+++-+=.
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~----~Gi~~~st~~d 113 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES----KGMIFISTLFS 113 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHH----TTCEEEEEECS
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHH----hCCeEEEeeCC
Confidence 455677788899987652 32 145777888888743 24789998877
Q ss_pred HHHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHH
Q 007936 336 IDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAV 414 (584)
Q Consensus 336 ~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav 414 (584)
.++++-+++ . +|.+=||-+|+. .. .+++.+.+.|||||+.|-| -|-+|+...++++
T Consensus 114 ~~svd~l~~---~~v~~~KI~S~~~~------n~-----~LL~~va~~gkPviLstGm---------at~~Ei~~Ave~i 170 (349)
T 2wqp_A 114 RAAALRLQR---MDIPAYKIGSGECN------NY-----PLIKLVASFGKPIILSTGM---------NSIESIKKSVEII 170 (349)
T ss_dssp HHHHHHHHH---HTCSCEEECGGGTT------CH-----HHHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHH
T ss_pred HHHHHHHHh---cCCCEEEECccccc------CH-----HHHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHH
Confidence 777766655 4 699999988873 22 2466677789999999864 3678998888877
Q ss_pred H-cccceEeecCCCCCCCChH
Q 007936 415 R-QRADALMLSGESAMGQFPD 434 (584)
Q Consensus 415 ~-~G~D~imLs~ETa~G~yPv 434 (584)
. .|.+.++|-. +-.||.
T Consensus 171 ~~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 171 REAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp HHHTCCEEEEEC---CCCSSC
T ss_pred HHcCCCEEEEec---cCCCCC
Confidence 6 4667777743 334764
No 111
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=73.43 E-value=54 Score=30.31 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=68.4
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCC-cccccCC-CC
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARG-DLGAQIP-LE 366 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRG-DLg~ei~-~e 366 (584)
++.+.+.|+|+|.++.-.- ++..++++. ..+.+..-+.|.+.+... ...-+|.|++... +=+..-+ ..
T Consensus 79 ~~~a~~~gad~v~l~~~~~--~~~~~~~~~------~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~ 148 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPEDM--PIEVAKEIA------PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARV 148 (215)
T ss_dssp HHHHHHHTCSEEEECTTSC--CHHHHHHHC------TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCC
T ss_pred HHHHHHcCCCEEEECCccC--CHHHHHHhC------CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCC
Confidence 3567889999998874321 133444332 124455556665443221 1123899998641 1000000 11
Q ss_pred ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHH
Q 007936 367 QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSL 445 (584)
Q Consensus 367 ~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~ 445 (584)
.-.. .+-+.++...+|++.+-- -+. .++..+...|+|++.++.--...+.|.+.++.+.+.++
T Consensus 149 ~~~~---~l~~l~~~~~~pvia~GG----------I~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 149 IGLE---GLRKIVESVKIPVVAIGG----------INK---DNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp CHHH---HHHHHHHHCSSCEEEESS----------CCT---TTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred cCHH---HHHHHHHhCCCCEEEECC----------cCH---HHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 1111 122223345889988632 222 24566677899999987644444567777766655544
No 112
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=73.41 E-value=32 Score=32.15 Aligned_cols=129 Identities=9% Similarity=0.003 Sum_probs=68.0
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPL 365 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~ 365 (584)
..+++.+++.|+|+|.++. ...+ +. +.++ ..+ ..++.-+.|++-+.. ....-+|.|.+-+++ ..++
T Consensus 70 ~~~i~~a~~~Gad~V~~~~-~~~~-~~---~~~~--~~g--~~~~~g~~t~~e~~~--a~~~G~d~v~v~~t~---~~g~ 135 (212)
T 2v82_A 70 PEQVDALARMGCQLIVTPN-IHSE-VI---RRAV--GYG--MTVCPGCATATEAFT--ALEAGAQALKIFPSS---AFGP 135 (212)
T ss_dssp HHHHHHHHHTTCCEEECSS-CCHH-HH---HHHH--HTT--CEEECEECSHHHHHH--HHHTTCSEEEETTHH---HHCH
T ss_pred HHHHHHHHHcCCCEEEeCC-CCHH-HH---HHHH--HcC--CCEEeecCCHHHHHH--HHHCCCCEEEEecCC---CCCH
Confidence 3578899999999998664 2222 22 2221 223 333333444433211 111227999874432 1121
Q ss_pred CChHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCC----CChHHHHHH
Q 007936 366 EQVPSAQQKIVQLCRQLN--KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMG----QFPDKALTV 439 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~g--KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G----~yPveaV~~ 439 (584)
+.+-+.++... .|++...- -+. .++..+...|+|++....--..+ ..|.++++.
T Consensus 136 -------~~~~~l~~~~~~~ipvia~GG----------I~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~ 195 (212)
T 2v82_A 136 -------QYIKALKAVLPSDIAVFAVGG----------VTP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAA 195 (212)
T ss_dssp -------HHHHHHHTTSCTTCEEEEESS----------CCT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHH
T ss_pred -------HHHHHHHHhccCCCeEEEeCC----------CCH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHH
Confidence 22222333333 78776532 122 35566677899999986433332 347777777
Q ss_pred HHHHHHHHh
Q 007936 440 LRSVSLRIE 448 (584)
Q Consensus 440 m~~I~~~aE 448 (584)
+.+.+.++-
T Consensus 196 l~~~~~~~~ 204 (212)
T 2v82_A 196 FVKAYREAV 204 (212)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665443
No 113
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=72.72 E-value=10 Score=38.08 Aligned_cols=90 Identities=13% Similarity=0.268 Sum_probs=52.8
Q ss_pred HhhhHHhHhcCCCEE--EEcC---------CCCHH-----------HHHHHHHHHHhhcCCCCceEEEeec-CH---HHH
Q 007936 286 WLDIDFGITEGVDFI--AISF---------VKSAE-----------VINHLKSYIAARSRDSDIAVIAKIE-SI---DSL 339 (584)
Q Consensus 286 ~~dI~~al~~gvD~I--~lSf---------V~sae-----------dV~~lr~~l~~~~~~~~i~IiAKIE-t~---~av 339 (584)
.+.++...+.|+|+| -+|| ++.+. ++-++.+.++ ..+.+++++.+.- ++ -|+
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir--~~~~~~Pivlm~Y~npv~~~g~ 112 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVR--AQHPDMPIGLLLYANLVFANGI 112 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHH--HHCTTCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHH--hcCCCCCEEEEecCcHHHHhhH
Confidence 445555567899985 5566 33332 2222323332 1123567777754 43 345
Q ss_pred hcH-HHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE
Q 007936 340 KNL-EEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI 387 (584)
Q Consensus 340 ~Nl-deIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi 387 (584)
+++ ++..++ +||+++. ++|+|+ ....++.|+++|...+
T Consensus 113 e~f~~~~~~aGvdgvii~------Dlp~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIA------DVPVEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEeC------CCCHhh----HHHHHHHHHHcCCeEE
Confidence 544 444444 8999994 456665 4678889999998755
No 114
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=72.08 E-value=26 Score=35.10 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=88.0
Q ss_pred CCCCccCHhhh-HHhHhc--CCCEEEEcCCCCHHHHHHHHHHHHhhcCCC-CceEEEeecCHHHHhcHHHHH-------H
Q 007936 279 PTISPKDWLDI-DFGITE--GVDFIAISFVKSAEVINHLKSYIAARSRDS-DIAVIAKIESIDSLKNLEEII-------L 347 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~--gvD~I~lSfV~saedV~~lr~~l~~~~~~~-~i~IiAKIEt~~av~NldeIl-------~ 347 (584)
|..|+.|.+.+ +.+.+. |++.|+++ +..+..+++.++. .+. .++|.+-|=-|.|-.+.+..+ +
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~--~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~ 96 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKE--QGTPEIRIATVTNFPHGNDDIDIALAETRAAIA 96 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHH--TTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhh--cCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 34455554444 345566 78888765 4567777887742 123 578888775544433333222 1
Q ss_pred h-CCEEEE--eCCcccccCCCCChHHHHHHHHHHHHHcCCC--eEEehhhhHhhhcCCCCChhh-HHHHHH-HHHcccce
Q 007936 348 A-SDGAMV--ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKP--VIVASQLLESMIEYPTPTRAE-VADVSE-AVRQRADA 420 (584)
Q Consensus 348 ~-sDGImI--aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKP--vivATqmLeSMi~~p~PTrAE-v~Dv~n-av~~G~D~ 420 (584)
. +|.|=+ ..|-| .+=-++.+..-.+.+.+.|...|+| ||+.|-.| +..| +..... ++..|+|.
T Consensus 97 ~GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADf 166 (260)
T 1p1x_A 97 YGADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADF 166 (260)
T ss_dssp HTCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSE
T ss_pred cCCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCE
Confidence 1 565422 12211 0111245566666778888877888 48888777 4456 434443 77899999
Q ss_pred EeecCCCCCCCC----hHHHHHHHHHHHHHH
Q 007936 421 LMLSGESAMGQF----PDKALTVLRSVSLRI 447 (584)
Q Consensus 421 imLs~ETa~G~y----PveaV~~m~~I~~~a 447 (584)
|=-| .|.. -.+.|+.|++.+++.
T Consensus 167 VKTS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 167 IKTS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp EECC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred EEeC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 8655 4554 469999999887643
No 115
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=71.49 E-value=28 Score=34.94 Aligned_cols=100 Identities=8% Similarity=0.066 Sum_probs=63.4
Q ss_pred HhhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEe
Q 007936 286 WLDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIa 355 (584)
.+.++|-++.|+|+|++ .+.-|.++=.++.+... +..+.+++||+-+= |.++++.....-+. +||+|+.
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~-~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFI-AAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHH-HTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH-HHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 34557888999999987 34556666656555553 23445688999884 47777766666655 8999997
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHc---CCCeEEe
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQL---NKPVIVA 389 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~---gKPvivA 389 (584)
+-.+.-..+.+.+...-+. .|.+. +.|+++-
T Consensus 106 ~P~y~~~~s~~~l~~~f~~---va~a~p~~~lPiilY 139 (294)
T 3b4u_A 106 PPSYFKNVSDDGLFAWFSA---VFSKIGKDARDILVY 139 (294)
T ss_dssp CCCSSCSCCHHHHHHHHHH---HHHHHCTTCCCEEEE
T ss_pred CCcCCCCCCHHHHHHHHHH---HHHhcCCCCCcEEEE
Confidence 6654321122333333333 45555 7999974
No 116
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=71.45 E-value=47 Score=35.61 Aligned_cols=119 Identities=20% Similarity=0.211 Sum_probs=73.2
Q ss_pred HhhhHHhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHhCCEEEEeCCcccc-
Q 007936 286 WLDIDFGITEGVDFIAISFV--KSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILASDGAMVARGDLGA- 361 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV--~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~sDGImIaRGDLg~- 361 (584)
.+.+.+.++.|+|.+.+.-. ....-+..++.+- ... .+.+++ .+-++++...+. -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~--~~~--~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~ 301 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMR--QKV--DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSIC 301 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHH--HTC--CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTB
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHH--HHh--CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccce
Confidence 56677888999998877632 2333344444332 111 467666 477877776555 68999996543111
Q ss_pred ------cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 362 ------QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 362 ------ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
..+... ...-..+.+.+.+.+.|||.+.-+. --.|++.|+..|||++|+..
T Consensus 302 ~~r~~~~~g~~~-~~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 302 TTRIVAGVGVPQ-ITAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp CHHHHTCCCCCH-HHHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred eeeEEeecCcch-HHHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeCh
Confidence 112222 2333444555666789998764322 24688999999999999864
No 117
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=71.25 E-value=3.5 Score=40.59 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=84.1
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhc-------HHHHHHh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKN-------LEEIILA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~N-------ldeIl~~-s 349 (584)
|..|+.|.+.+ +.+.+.|++.|+++ +..+..+++.+ .. +++.+-|=-|.|-.+ .++ ++. +
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l-----~g-v~v~tvigFP~G~~~~~~k~~E~~~-i~~GA 80 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLL-----RK-VKLCVVADFPFGALPTASRIALVSR-LAEVA 80 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGC-----SS-SEEEEEESTTTCCSCHHHHHHHHHH-HTTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHh-----CC-CeEEEEeCCCCCCCchHHHHHHHHH-HHCCC
Confidence 44566665554 56788999999986 34455666555 12 777777744443322 334 333 5
Q ss_pred CEEEEeCCcccccCC------CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEe
Q 007936 350 DGAMVARGDLGAQIP------LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALM 422 (584)
Q Consensus 350 DGImIaRGDLg~ei~------~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~im 422 (584)
|.|-+ -+.++ ++.+..-.+.+.+.|...+.|||+.|-.| |..|+..... ++..|+|.|=
T Consensus 81 dEID~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVK 146 (226)
T 1vcv_A 81 DEIDV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIK 146 (226)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEE
T ss_pred CEEEE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEE
Confidence 55422 12222 12333444455556655566788877655 5677766665 6778999986
Q ss_pred ecCCCCCCCC--------------hHHHHHHHHHHHHHH
Q 007936 423 LSGESAMGQF--------------PDKALTVLRSVSLRI 447 (584)
Q Consensus 423 Ls~ETa~G~y--------------PveaV~~m~~I~~~a 447 (584)
-| .|.. -++.|+.|++.++.+
T Consensus 147 TS----TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~ 181 (226)
T 1vcv_A 147 SS----TGFAEEAYAARQGNPVHSTPERAAAIARYIKEK 181 (226)
T ss_dssp CC----CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 55 4443 367889998887654
No 118
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=70.41 E-value=29 Score=35.12 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=61.3
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ ++.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~-~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAE-EAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 4457788999999987 344555555555554432 2344689999984 47777766666655 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcC-CCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLN-KPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~g-KPvivA 389 (584)
-.+.- .+.+.+...-+.|. .+.+ .|+++-
T Consensus 115 P~y~~-~s~~~l~~~f~~va---~a~~~lPiilY 144 (303)
T 2wkj_A 115 PFYYP-FSFEEHCDHYRAII---DSADGLPMVVY 144 (303)
T ss_dssp CCSSC-CCHHHHHHHHHHHH---HHHTTCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHH---HhCCCCCEEEE
Confidence 54421 12344444444444 4445 898874
No 119
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=70.36 E-value=39 Score=33.92 Aligned_cols=126 Identities=13% Similarity=0.086 Sum_probs=75.7
Q ss_pred HhhhHHhHhcCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEEEEeCCccc
Q 007936 286 WLDIDFGITEGVDFIAISF-VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGAMVARGDLG 360 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSf-V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGImIaRGDLg 360 (584)
...+..+...|+|.|.+-- .-+.+++.++.++.. +.| ..+++-+- |.+|+..+ +|-|-+..-||.
T Consensus 132 ~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~--~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~ 201 (272)
T 3tsm_A 132 PYQVYEARSWGADCILIIMASVDDDLAKELEDTAF--ALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLR 201 (272)
T ss_dssp THHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHH--HTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTT
T ss_pred HHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHH--HcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCc
Confidence 3357788999999977653 345677888877773 333 45565554 45555443 687877755653
Q ss_pred c-cCCCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHH
Q 007936 361 A-QIPLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKAL 437 (584)
Q Consensus 361 ~-ei~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV 437 (584)
. +..++. ..+.+... ++|++.- +..-|.+ |+..+...|+|+++...---....|.+++
T Consensus 202 t~~~dl~~-------~~~L~~~ip~~~~vIae---------sGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~ 262 (272)
T 3tsm_A 202 SFEVNLAV-------SERLAKMAPSDRLLVGE---------SGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAAT 262 (272)
T ss_dssp TCCBCTHH-------HHHHHHHSCTTSEEEEE---------SSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHH
T ss_pred cCCCChHH-------HHHHHHhCCCCCcEEEE---------CCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHH
Confidence 2 222221 22223333 5666643 3444554 56667788999999865444556777777
Q ss_pred HHH
Q 007936 438 TVL 440 (584)
Q Consensus 438 ~~m 440 (584)
+-|
T Consensus 263 ~~l 265 (272)
T 3tsm_A 263 RAL 265 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 120
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=70.00 E-value=15 Score=35.31 Aligned_cols=68 Identities=18% Similarity=0.287 Sum_probs=41.5
Q ss_pred CHhhh-HHhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhhcCCCCceEEE--eecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 285 DWLDI-DFGITEGVDFIAIS-----FVKSAEVINHLKSYIAARSRDSDIAVIA--KIESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 285 D~~dI-~~al~~gvD~I~lS-----fV~saedV~~lr~~l~~~~~~~~i~IiA--KIEt~~av~NldeIl~~-sDGImIa 355 (584)
|..++ +...+.|+|+|.+. |.....+...++++. +. .++++++ .|.++ +.+++.++. +|+|+++
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~--~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVA--EQ--IDIPFTVGGGIHDF---ETASELILRGADKVSIN 103 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHH--TT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHH--Hh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEC
Confidence 44443 45568899998775 333344455555544 22 2456666 46665 346666666 8999998
Q ss_pred CCcc
Q 007936 356 RGDL 359 (584)
Q Consensus 356 RGDL 359 (584)
+..|
T Consensus 104 ~~~l 107 (253)
T 1thf_D 104 TAAV 107 (253)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 7766
No 121
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=69.84 E-value=18 Score=37.77 Aligned_cols=93 Identities=14% Similarity=0.181 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE
Q 007936 309 EVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI 387 (584)
Q Consensus 309 edV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi 387 (584)
++.+.|+++.+. ..+.+++-.=..++++-+ .+. +|.+=||-+|+. .+| +++.+.+.|||||
T Consensus 78 e~~~~L~~~~~~----~Gi~~~st~fD~~svd~l---~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPvi 139 (350)
T 3g8r_A 78 EQMQKLVAEMKA----NGFKAICTPFDEESVDLI---EAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVV 139 (350)
T ss_dssp HHHHHHHHHHHH----TTCEEEEEECSHHHHHHH---HHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEE
T ss_pred HHHHHHHHHHHH----cCCcEEeccCCHHHHHHH---HHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEE
Confidence 445555555532 124555544444444333 334 689999988872 232 4556667899999
Q ss_pred EehhhhHhhhcCCCCChhhHHHHHHHHHc-ccceEeecCCCC
Q 007936 388 VASQLLESMIEYPTPTRAEVADVSEAVRQ-RADALMLSGESA 428 (584)
Q Consensus 388 vATqmLeSMi~~p~PTrAEv~Dv~nav~~-G~D~imLs~ETa 428 (584)
+.|-| -|-.|+...++++.. |.+.++|-.++.
T Consensus 140 LstGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~ 172 (350)
T 3g8r_A 140 ASTAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE 172 (350)
T ss_dssp EECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred EECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 99874 377899998888765 678777755654
No 122
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=69.52 E-value=15 Score=37.46 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=59.4
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.++.||+-+ -|.++++....--+. +||+|+-+
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILE-HVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHH-HhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 34567889999998883 23344444444444422 224568899887 366676666665555 89999976
Q ss_pred Cccc--ccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLG--AQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg--~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-... ...+.+.+...-+.| |.+.+.|+++-
T Consensus 112 Pyy~~~~~~s~~~l~~~f~~v---a~a~~lPiilY 143 (309)
T 3fkr_A 112 PYHGATFRVPEAQIFEFYARV---SDAIAIPIMVQ 143 (309)
T ss_dssp SCBTTTBCCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCccCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 5543 122333444444444 44558898875
No 123
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=69.46 E-value=25 Score=35.25 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=60.4
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.++.||+-+ -|.++++.....-+. +||+|+-+
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVID-LVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHH-HhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 34567889999999874 33344444444444432 224568999988 466777666666655 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+...-+.|.+ +.+.|+++-
T Consensus 106 P~y~~-~~~~~l~~~f~~ia~---a~~lPiilY 134 (292)
T 3daq_A 106 PYYNK-TNQRGLVKHFEAIAD---AVKLPVVLY 134 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHHHH---HHCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 54422 122344444444444 448999975
No 124
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=69.13 E-value=18 Score=32.70 Aligned_cols=63 Identities=19% Similarity=0.238 Sum_probs=37.0
Q ss_pred eEeeCCCEEEEeecccCCCCCCCEEEeccc-------chhcccCCCCEEEEeCC----eeEEEEEEE---eCCeEEEEEE
Q 007936 186 ARAEDGEIWTFTVRAFDSPRPERTITVNYD-------GFAEDVKVGDELLVDGG----MVRFEVIEK---IGPDVKCRCT 251 (584)
Q Consensus 186 i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~-------~~~~~v~vGd~I~idDG----~i~l~V~~~---~~~~i~c~v~ 251 (584)
++.+.|..+++|.+. .|++... -+.++|++||.|++.|| ...-+|.++ ....++|=.+
T Consensus 58 I~t~~g~~L~lTp~H--------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT 129 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH--------LVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLT 129 (145)
T ss_dssp EEETTSCEEEECTTC--------EEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEECCCCEEEEeCCC--------EEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEcccc
Confidence 444567777776542 3333221 26789999999999887 233334443 3345666555
Q ss_pred cCcee
Q 007936 252 DPGLL 256 (584)
Q Consensus 252 ~~G~l 256 (584)
..|.|
T Consensus 130 ~~Gti 134 (145)
T 1at0_A 130 REGTI 134 (145)
T ss_dssp SSSEE
T ss_pred CcEEE
Confidence 55543
No 125
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=68.68 E-value=28 Score=36.34 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=84.5
Q ss_pred CccCHhhhHHh---HhcCCCEEEEcC----------CCCHHHHHHHHHHHHhh--cC--CCCceEEEeecCHHHHhcHHH
Q 007936 282 SPKDWLDIDFG---ITEGVDFIAISF----------VKSAEVINHLKSYIAAR--SR--DSDIAVIAKIESIDSLKNLEE 344 (584)
Q Consensus 282 t~kD~~dI~~a---l~~gvD~I~lSf----------V~saedV~~lr~~l~~~--~~--~~~i~IiAKIEt~~av~Nlde 344 (584)
|+.+.+|...+ +..++|+|-+.+ .++++.+.++.+.++.. .. ..++.|+.||=--...+++.+
T Consensus 159 t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ 238 (367)
T 3zwt_A 159 SVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKED 238 (367)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHH
T ss_pred CCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHH
Confidence 34456666543 334689987743 34566666666655321 10 135899999942111234555
Q ss_pred HHHh-----CCEEEEe-----CCcc-----cccCC-C---CChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCC
Q 007936 345 IILA-----SDGAMVA-----RGDL-----GAQIP-L---EQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPT 403 (584)
Q Consensus 345 Il~~-----sDGImIa-----RGDL-----g~ei~-~---e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PT 403 (584)
|++. +|||.+- |-++ +.+.+ + ...+...+.+-+..+.. ..|+|...- .-|
T Consensus 239 ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GG---------I~s 309 (367)
T 3zwt_A 239 IASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGG---------VSS 309 (367)
T ss_dssp HHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESS---------CCS
T ss_pred HHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECC---------CCC
Confidence 5554 7999874 2111 11111 1 12334444444455555 689997643 222
Q ss_pred hhhHHHHHHHHHcccceEeecCCCCC-CCChHHHHHHHHHHHHHHhhhhh
Q 007936 404 RAEVADVSEAVRQRADALMLSGESAM-GQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 404 rAEv~Dv~nav~~G~D~imLs~ETa~-G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
..|+..++..|+|+||+..---. | | .++.+|....+.++.
T Consensus 310 ---~~da~~~l~~GAd~V~vgra~l~~g--P----~~~~~i~~~l~~~m~ 350 (367)
T 3zwt_A 310 ---GQDALEKIRAGASLVQLYTALTFWG--P----PVVGKVKRELEALLK 350 (367)
T ss_dssp ---HHHHHHHHHHTCSEEEESHHHHHHC--T----HHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHcCCCEEEECHHHHhcC--c----HHHHHHHHHHHHHHH
Confidence 45778888899999999733211 2 3 356666666666543
No 126
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=68.63 E-value=11 Score=38.52 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=84.6
Q ss_pred HHHhcHHHHHH----hCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChh-hHHHHH
Q 007936 337 DSLKNLEEIIL----ASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRA-EVADVS 411 (584)
Q Consensus 337 ~av~NldeIl~----~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrA-Ev~Dv~ 411 (584)
.+++++++.+. .+|+|++-+|=+..-. . ...++|.|+...-=+|+.. .|.+. -..++.
T Consensus 70 ~gl~~~~~~i~~l~~g~dav~~~~G~~~~~~-------------~--~~~~~~lil~l~~~t~~~~--~~~~~~l~~~ve 132 (295)
T 3glc_A 70 TGLERIDINIAPLFEHADVLMCTRGILRSVV-------------P--PATNRPVVLRASGANSILA--ELSNEAVALSMD 132 (295)
T ss_dssp TTCTTHHHHTGGGGGGCSEEEECHHHHHHHS-------------C--GGGCCCEEEECEECCCTTS--CTTCCEECSCHH
T ss_pred CchhhhHHHHHHhhcCCCEEEECHhHHhhhc-------------c--ccCCccEEEEEcCCCcCCC--CCccchhHHHHH
Confidence 35666655443 3799998655332111 1 1247888886433333322 23332 236788
Q ss_pred HHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcCCc
Q 007936 412 EAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLEVD 491 (584)
Q Consensus 412 nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~ 491 (584)
.|+..|+|++-+..-.. ..+..+.++.+..++.++++|-.. .. ++ .........+ ..+...++++|.+++|+
T Consensus 133 ~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Glp-vI---ie-~~~G~~~~~d--~e~i~~aariA~elGAD 204 (295)
T 3glc_A 133 DAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMP-TM---AV-TGVGKDMVRD--QRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp HHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCC-EE---EE-ECC----CCS--HHHHHHHHHHHHHTTCS
T ss_pred HHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCE-EE---EE-CCCCCccCCC--HHHHHHHHHHHHHhCCC
Confidence 89999999998853322 345567888888888888764100 00 00 0000011111 23344578899999999
Q ss_pred EEEEccCCchHHHHHhccCCCCcEEEEcC
Q 007936 492 ALFVYTKTGHMASLLSRCRPDCPIFAFTS 520 (584)
Q Consensus 492 aIvv~T~sG~tA~~lSr~RP~~PIiavT~ 520 (584)
.|-+. .+|.+-+.+...- .+||++.--
T Consensus 205 ~VKt~-~t~e~~~~vv~~~-~vPVv~~GG 231 (295)
T 3glc_A 205 IIKTY-YVEKGFERIVAGC-PVPIVIAGG 231 (295)
T ss_dssp EEEEE-CCTTTHHHHHHTC-SSCEEEECC
T ss_pred EEEeC-CCHHHHHHHHHhC-CCcEEEEEC
Confidence 65443 3443333333222 378887553
No 127
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=68.22 E-value=34 Score=31.86 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=62.9
Q ss_pred hHhcCCCEEEEc--C--CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhc-HHHHHHh-CCEEEEeCCcccccCCC
Q 007936 292 GITEGVDFIAIS--F--VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKN-LEEIILA-SDGAMVARGDLGAQIPL 365 (584)
Q Consensus 292 al~~gvD~I~lS--f--V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~N-ldeIl~~-sDGImIaRGDLg~ei~~ 365 (584)
.+..|+|+|-+- | -...+.|+++|+.. .+..|.+-.=...+.+. +++..+. +|++++. ++.
T Consensus 21 ~~~~~~diie~G~p~~~~~g~~~i~~ir~~~------~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~----- 87 (211)
T 3f4w_A 21 KVVDDVDIIEVGTPFLIREGVNAIKAIKEKY------PHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT----- 87 (211)
T ss_dssp HHGGGCSEEEECHHHHHHHTTHHHHHHHHHC------TTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-----
T ss_pred HhhcCccEEEeCcHHHHhccHHHHHHHHHhC------CCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-----
Confidence 334689997764 3 23345555555532 13455543222233444 6666666 8999994 221
Q ss_pred CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 366 EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.....+.+++.|+++|+++++. ++ +| .|. ...+..+...|+|.+.+.
T Consensus 88 --~~~~~~~~~~~~~~~g~~~~v~--~~-----~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 --DVLTIQSCIRAAKEAGKQVVVD--MI-----CV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp --CHHHHHHHHHHHHHHTCEEEEE--CT-----TC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred --ChhHHHHHHHHHHHcCCeEEEE--ec-----CC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 1234478899999999998864 11 11 122 233566778899998764
No 128
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=67.81 E-value=30 Score=35.35 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=22.6
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
+.|+|...- .-| -.|+..++..|||++++..
T Consensus 251 ~ipvia~GG---------I~~---~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGG---------LQD---ALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESS---------CCS---HHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECC---------CCC---HHHHHHHHHcCCCEEEEcH
Confidence 688887532 222 3578888899999999974
No 129
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=67.77 E-value=21 Score=35.81 Aligned_cols=144 Identities=8% Similarity=0.041 Sum_probs=75.6
Q ss_pred hHHhHhcCCC---EEEEcCC-----------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh------
Q 007936 289 IDFGITEGVD---FIAISFV-----------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA------ 348 (584)
Q Consensus 289 I~~al~~gvD---~I~lSfV-----------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~------ 348 (584)
++.+.+.|+| +|-+.|- .+.+.+.++.+.++... +..|+.|+=.--..+++.++++.
T Consensus 112 a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~---~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~ 188 (314)
T 2e6f_A 112 VRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY---GLPFGVKMPPYFDIAHFDTAAAVLNEFPL 188 (314)
T ss_dssp HHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH---CSCEEEEECCCCCHHHHHHHHHHHHTCTT
T ss_pred HHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 3445567899 8888663 25555555555553221 46899998432112233333422
Q ss_pred CCEEEEeCCc---cccc-------C----------CCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhH
Q 007936 349 SDGAMVARGD---LGAQ-------I----------PLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEV 407 (584)
Q Consensus 349 sDGImIaRGD---Lg~e-------i----------~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv 407 (584)
+|+|.+.-.- +.++ + +....+.....+-+..+.. +.|+|...- .-| .
T Consensus 189 ~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GG---------I~~---~ 256 (314)
T 2e6f_A 189 VKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGG---------VYS---G 256 (314)
T ss_dssp EEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESS---------CCS---H
T ss_pred ceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECC---------CCC---H
Confidence 6777654211 0011 0 1111233333333334444 788887532 222 3
Q ss_pred HHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 408 ADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 408 ~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.|+..++..|||++++..---. +-| .+..++....+.|+.
T Consensus 257 ~da~~~l~~GAd~V~ig~~~l~-~~p----~~~~~i~~~l~~~~~ 296 (314)
T 2e6f_A 257 EDAFLHILAGASMVQVGTALQE-EGP----GIFTRLEDELLEIMA 296 (314)
T ss_dssp HHHHHHHHHTCSSEEECHHHHH-HCT----THHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEchhhHh-cCc----HHHHHHHHHHHHHHH
Confidence 4677888899999999743322 123 356666666666654
No 130
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=67.32 E-value=21 Score=33.30 Aligned_cols=76 Identities=24% Similarity=0.284 Sum_probs=51.9
Q ss_pred EeeCCCEEEEeecc---cCCCCCCCEEEecccchhc--ccCCCCEEEEe--CCeeEEEEEEEeCCeEEEEEEcCceeCCC
Q 007936 187 RAEDGEIWTFTVRA---FDSPRPERTITVNYDGFAE--DVKVGDELLVD--GGMVRFEVIEKIGPDVKCRCTDPGLLLPR 259 (584)
Q Consensus 187 ~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~~--~v~vGd~I~id--DG~i~l~V~~~~~~~i~c~v~~~G~l~s~ 259 (584)
-++.|++++|+... |-...++....++...|.. .+++|+.+.+. +|.+..+|+++.++.++.-. +.. ...
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~--NHP-LAG 127 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDG--NHM-LAG 127 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEEES--CCS-SCC
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEEeC--CCC-CCC
Confidence 46799999998763 3223445566778777765 58999999997 57767789999888765332 222 345
Q ss_pred ceeeec
Q 007936 260 ANLTFW 265 (584)
Q Consensus 260 Kgvnf~ 265 (584)
|.++|.
T Consensus 128 k~L~F~ 133 (171)
T 2k8i_A 128 QNLKFN 133 (171)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 666654
No 131
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=66.94 E-value=68 Score=32.36 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=66.1
Q ss_pred CCCCccCHhhhHHhHhcCCCEEEEcCC-------------CCHHH-HHHHHHHHHhhcCCCCceEEEeecC------HHH
Q 007936 279 PTISPKDWLDIDFGITEGVDFIAISFV-------------KSAEV-INHLKSYIAARSRDSDIAVIAKIES------IDS 338 (584)
Q Consensus 279 p~lt~kD~~dI~~al~~gvD~I~lSfV-------------~saed-V~~lr~~l~~~~~~~~i~IiAKIEt------~~a 338 (584)
.-+|.+|..--+.+-+.|+|.|.+..- =+.++ +..++...+ . -.++.|++=+|+ .++
T Consensus 32 ~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r--~-~~~~~vvaD~pfgsY~s~~~a 108 (275)
T 3vav_A 32 AMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVAR--A-QPRALIVADLPFGTYGTPADA 108 (275)
T ss_dssp EEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH--T-CCSSEEEEECCTTSCSSHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHh--c-CCCCCEEEecCCCCCCCHHHH
Confidence 345778888888888999999987621 12233 344555442 2 235889999998 477
Q ss_pred HhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 339 LKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 339 v~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
++|...++++ ++||-+-=|. .+...|+...++|+||+-.
T Consensus 109 ~~~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 109 FASAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp HHHHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEe
Confidence 8888888887 8999886442 2244566667899999854
No 132
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=66.94 E-value=9 Score=41.68 Aligned_cols=51 Identities=27% Similarity=0.367 Sum_probs=43.0
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
+-.+.+.+|....+.+.++.|+++|+++.=||++||..+.+.++++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 455677888877889999999999999999999999887777777777653
No 133
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=66.86 E-value=43 Score=35.69 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=79.3
Q ss_pred HhHhcCCCEEEEcC----------CCCHHHHHHHHHHHHhhc-----------------CCCCce-EEEeecCHHHHhcH
Q 007936 291 FGITEGVDFIAISF----------VKSAEVINHLKSYIAARS-----------------RDSDIA-VIAKIESIDSLKNL 342 (584)
Q Consensus 291 ~al~~gvD~I~lSf----------V~saedV~~lr~~l~~~~-----------------~~~~i~-IiAKIEt~~av~Nl 342 (584)
..+..-+|+|-+.+ -++++.+.++.+.++... ...+.. |+.||=--..-+++
T Consensus 206 ~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i 285 (415)
T 3i65_A 206 NKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQK 285 (415)
T ss_dssp HHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHH
T ss_pred HHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHH
Confidence 33444589987654 255666666655554210 112466 89999321122245
Q ss_pred HHHHHh-----CCEEEEeCC-----cc---cccCC----CCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCC
Q 007936 343 EEIILA-----SDGAMVARG-----DL---GAQIP----LEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPT 403 (584)
Q Consensus 343 deIl~~-----sDGImIaRG-----DL---g~ei~----~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PT 403 (584)
.+|++. +|||.+--. |+ ..+.+ ....+...+.|-+..++. ..|+|...- .-
T Consensus 286 ~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GG---------I~- 355 (415)
T 3i65_A 286 KEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGG---------IF- 355 (415)
T ss_dssp HHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSS---------CC-
T ss_pred HHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECC---------CC-
Confidence 555554 799987621 11 11111 122344455555555555 589887643 22
Q ss_pred hhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 404 RAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 404 rAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
-..|+..++..|||+|++..--- ..=| .++.+|.++.+.|+.
T Consensus 356 --s~eDa~e~l~aGAd~VqIgra~l-~~GP----~~~~~i~~~L~~~l~ 397 (415)
T 3i65_A 356 --SGLDALEKIEAGASVCQLYSCLV-FNGM----KSAVQIKRELNHLLY 397 (415)
T ss_dssp --SHHHHHHHHHHTEEEEEESHHHH-HHGG----GHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHcCCCEEEEcHHHH-hcCH----HHHHHHHHHHHHHHH
Confidence 24677888999999999963211 0002 356677777777654
No 134
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=66.76 E-value=21 Score=36.38 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=60.5
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +--|.++=.++.+...+ ..+.++.||+-+= |.++++.....-+. +||+|+-+
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~-~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVD-QVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 34567889999999883 33455555555444432 2244688999884 56777766666666 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+...-+.| |.+.+.|+++-
T Consensus 127 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 155 (314)
T 3qze_A 127 PYYNK-PTQEGMYQHFRHI---AEAVAIPQILY 155 (314)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHSCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54421 1223444444444 44558999875
No 135
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=66.73 E-value=22 Score=35.60 Aligned_cols=108 Identities=17% Similarity=0.252 Sum_probs=70.7
Q ss_pred CHhhhHHh-HhcCCCEEEEc-----CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhc---HHHHHHh-CCEEEE
Q 007936 285 DWLDIDFG-ITEGVDFIAIS-----FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKN---LEEIILA-SDGAMV 354 (584)
Q Consensus 285 D~~dI~~a-l~~gvD~I~lS-----fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~N---ldeIl~~-sDGImI 354 (584)
|..++..+ .+.|+++|-+- |=.+.+++.++|+.. +++|+.| +.+-| +++-... +|+|++
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-------~lPvl~k----dfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-------SIPVLRK----DFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-------SSCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-------CCCEEEC----ccccCHHHHHHHHHcCCCEEEE
Confidence 45555544 45799998763 223577888887754 3677765 22222 3444444 899999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
+-.||. +.-.+.++..|++.|..+++.+. |..| +..|...|+|.+-.++
T Consensus 142 i~a~l~--------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 142 IVAALE--------QSVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp EGGGSC--------HHHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred ecccCC--------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 766664 23356788999999999887532 3333 4556678999998885
No 136
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=66.64 E-value=53 Score=34.03 Aligned_cols=123 Identities=11% Similarity=0.111 Sum_probs=65.6
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEE-------------cCCCCHHH------------HHHHHHHHHhhcCCCCc
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAI-------------SFVKSAEV------------INHLKSYIAARSRDSDI 327 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~l-------------SfV~saed------------V~~lr~~l~~~~~~~~i 327 (584)
||..|+..+ +.+.+.|+|+|=+ |..+...| +.++.+.++ +..+.+
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr-~~vg~~- 228 (364)
T 1vyr_A 151 LELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVC-NEWSAD- 228 (364)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHH-HHSCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHH-HhcCCC-
Confidence 566666555 3457889999987 44343322 333333332 123444
Q ss_pred eEEEeecCH---H-------HHhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHH-HHHHcCCCeEEehh
Q 007936 328 AVIAKIESI---D-------SLKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQ-LCRQLNKPVIVASQ 391 (584)
Q Consensus 328 ~IiAKIEt~---~-------av~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~-~c~~~gKPvivATq 391 (584)
.|..||-.- . .++..-++++. +|.|-+..+...- .+...+ ..++ ..+..++||+....
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~~~~~~-----~~~~~v~~~~~iPvi~~Gg 302 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG-GKPYSE-----AFRQKVRERFHGVIIGAGA 302 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB-CCCCCH-----HHHHHHHHHCCSEEEEESS
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC-CCcccH-----HHHHHHHHHCCCCEEEECC
Confidence 678887322 1 22333333332 6888887653311 111111 2233 33455889887632
Q ss_pred hhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 392 LLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 392 mLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
. |+ .+...++..| +|+|++.
T Consensus 303 ---------i-t~---~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 303 ---------Y-TA---EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp ---------C-CH---HHHHHHHHTTSCSEEEES
T ss_pred ---------c-CH---HHHHHHHHCCCccEEEEC
Confidence 2 33 3446677888 9999996
No 137
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=66.50 E-value=20 Score=35.96 Aligned_cols=118 Identities=17% Similarity=0.143 Sum_probs=68.4
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEe--C-CcccccC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVA--R-GDLGAQI 363 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIa--R-GDLg~ei 363 (584)
+-++.+.+.|+|+++++=.-- ++..++++.++. .+ +..+--+=.....+.+..|++.++|.+-. + |=-|..-
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~--~g--l~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~ 188 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPV-EESAPFSKAAKA--HG--IAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTES 188 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHH--TT--CEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC----
T ss_pred HHHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHH--cC--CeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCcc
Confidence 345667889999999986544 567788888843 23 33333331112357899999998755332 1 2122221
Q ss_pred CCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 364 PLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.++.-....++.++++ ..|+++-. ..=|. .++..++..|+|++...
T Consensus 189 ---~~~~~~~~~v~~vr~~~~~pv~vGf---------GI~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 189 ---KAGEPIENILTQLAEFNAPPPLLGF---------GIAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -------CHHHHHHHHHTTTCCCEEECS---------SCCSH---HHHHHHHHTTCSEEEEC
T ss_pred ---CCcHHHHHHHHHHHHhcCCCEEEEC---------CcCCH---HHHHHHHHcCCCEEEEC
Confidence 1233344556666665 67998753 22222 34466788999999985
No 138
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=66.40 E-value=1.3e+02 Score=31.35 Aligned_cols=163 Identities=13% Similarity=0.190 Sum_probs=100.1
Q ss_pred cCCcccCCccccCCCCCccCHhhhHHh-HhcCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCCceEEEeec-CHHHHhcH
Q 007936 266 RDGSLVRERNAMLPTISPKDWLDIDFG-ITEGVDFIAISF-VKSAEVINHLKSYIAARSRDSDIAVIAKIE-SIDSLKNL 342 (584)
Q Consensus 266 ~~~~~lp~~~~~lp~lt~kD~~dI~~a-l~~gvD~I~lSf-V~saedV~~lr~~l~~~~~~~~i~IiAKIE-t~~av~Nl 342 (584)
|||-+-++. .++..|+..|... .+.|+|+|=+-| .-++.+.+.++.+.+ .+....+.+-.- .. +++
T Consensus 12 RDG~Q~~~~-----~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~---~~~~~~v~~~~r~~~---~di 80 (382)
T 2ztj_A 12 REGEQFEKA-----NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLAS---LGLKAKVVTHIQCRL---DAA 80 (382)
T ss_dssp TGGGGSTTC-----CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHT---SCCSSEEEEEEESCH---HHH
T ss_pred CcccCCCCC-----CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHh---cCCCcEEEEEcccCh---hhH
Confidence 555554442 4566777777555 458999999976 456666666665542 233455555431 22 224
Q ss_pred HHHHHh-CC--EEEEeCCccccc---CCCCChHHHHHHHHHHHHHcC--CCeEEehhhhHhhhcCCCCChhhHHHHHHHH
Q 007936 343 EEIILA-SD--GAMVARGDLGAQ---IPLEQVPSAQQKIVQLCRQLN--KPVIVASQLLESMIEYPTPTRAEVADVSEAV 414 (584)
Q Consensus 343 deIl~~-sD--GImIaRGDLg~e---i~~e~V~~~Qk~II~~c~~~g--KPvivATqmLeSMi~~p~PTrAEv~Dv~nav 414 (584)
+..++. .| .++++-.|+-.. +..+++....+..++.++++| ..|.+. +...++-+...+.+++.++
T Consensus 81 ~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 81 KVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHHHHHHH
Confidence 444433 56 445555553222 123455666788999999999 555543 2234455666778888866
Q ss_pred HcccceEeecCCCCCCCChHHHHHHHHHHHHH
Q 007936 415 RQRADALMLSGESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 415 ~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~ 446 (584)
.+-+|.+.|. +|.=.-.|.++-+.++.+...
T Consensus 155 ~~~a~~i~l~-DT~G~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 155 APYVDRVGLA-DTVGVATPRQVYALVREVRRV 185 (382)
T ss_dssp GGGCSEEEEE-ETTSCCCHHHHHHHHHHHHHH
T ss_pred HHhcCEEEec-CCCCCCCHHHHHHHHHHHHHh
Confidence 6669999987 787778899999888887654
No 139
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=66.34 E-value=33 Score=34.38 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=60.2
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++=.++.+...+ ..+.+++||+-+= |.++++....--+. +||+|+-+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVK-RAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4557788999999987 334455555555444432 2244689999884 46777666666555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 132 (294)
T 2ehh_A 104 PYYNK-PTQRGLYEHFK---TVAQEVDIPIIIY 132 (294)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54421 12233333333 4455668999874
No 140
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=66.16 E-value=35 Score=34.16 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=60.1
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVD-VVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44577889999998873 33455555555444432 2244689999984 46777766666555 89999876
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+. .|.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~---ia~a~~lPiilY 132 (289)
T 2yxg_A 104 PYYNK-PTQEGLRKHFGK---VAESINLPIVLY 132 (289)
T ss_dssp CCSSC-CCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 54421 122333333343 445568998874
No 141
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=66.00 E-value=38 Score=31.93 Aligned_cols=119 Identities=16% Similarity=0.213 Sum_probs=62.2
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCC-Cce-----------EEEeecC------HHHHhcHHH
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDS-DIA-----------VIAKIES------IDSLKNLEE 344 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~-~i~-----------IiAKIEt------~~av~Nlde 344 (584)
+.++++.+++.|+|+|.+.. ..+++.+.++.+.+ +. .+. +..++.. ...++-+..
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~-----g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~ 162 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREF-----GSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKE 162 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHH-----CGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHc-----CCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHH
Confidence 45677888899999999763 33344444444333 21 121 1233321 122333555
Q ss_pred HHHh-CCEEEEeCCcccc-cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEe
Q 007936 345 IILA-SDGAMVARGDLGA-QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALM 422 (584)
Q Consensus 345 Il~~-sDGImIaRGDLg~-ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~im 422 (584)
+.+. +|.|.+..-+..- ..++ .+ ..-+++ ++..+.|++... ..-+. .|+..+...|+|+++
T Consensus 163 ~~~~G~d~i~~~~~~~~g~~~~~-~~-~~i~~l---~~~~~~pvia~G---------Gi~~~---~~~~~~~~~Ga~~v~ 225 (253)
T 1h5y_A 163 VEELGAGEILLTSIDRDGTGLGY-DV-ELIRRV---ADSVRIPVIASG---------GAGRV---EHFYEAAAAGADAVL 225 (253)
T ss_dssp HHHHTCSEEEEEETTTTTTCSCC-CH-HHHHHH---HHHCSSCEEEES---------CCCSH---HHHHHHHHTTCSEEE
T ss_pred HHhCCCCEEEEecccCCCCcCcC-CH-HHHHHH---HHhcCCCEEEeC---------CCCCH---HHHHHHHHcCCcHHH
Confidence 5555 8998875333211 1111 11 122222 233588998763 22232 455666678999999
Q ss_pred ecC
Q 007936 423 LSG 425 (584)
Q Consensus 423 Ls~ 425 (584)
+..
T Consensus 226 vgs 228 (253)
T 1h5y_A 226 AAS 228 (253)
T ss_dssp ESH
T ss_pred HHH
Confidence 874
No 142
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=65.77 E-value=33 Score=35.21 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=60.6
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+.+
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve-~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAAT-ILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44577889999999873 34455555555544432 2344689999884 47777766666555 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 138 P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 138 VSYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54421 1223344343444 45568898874
No 143
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=65.75 E-value=49 Score=30.63 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=68.2
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccC
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQI 363 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei 363 (584)
+.++++.+.+.|+|+| ++-.-..+-+ ++++. ..+.+++.+-|.+-+ ..-++. +|.+-+-++++.
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~~~~~~~----~~~~~----~g~~vi~g~~t~~e~---~~a~~~Gad~vk~~~~~~~--- 136 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPHLDEEIS----QFCKE----KGVFYMPGVMTPTEL---VKAMKLGHTILKLFPGEVV--- 136 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSSCCHHHH----HHHHH----HTCEEECEECSHHHH---HHHHHTTCCEEEETTHHHH---
T ss_pred CHHHHHHHHHcCCCEE-EcCCCCHHHH----HHHHH----cCCcEECCcCCHHHH---HHHHHcCCCEEEEcCcccc---
Confidence 4556788899999999 5544444333 33321 136788866554422 222222 687776432210
Q ss_pred CCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCC---hHHHHHH
Q 007936 364 PLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQF---PDKALTV 439 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~y---PveaV~~ 439 (584)
-.+.+-+.+... +.|++.+.- . +. .++..+...|+|++...+-... .. |.+.++.
T Consensus 137 -------g~~~~~~l~~~~~~~pvia~GG---------I-~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~ 195 (205)
T 1wa3_A 137 -------GPQFVKAMKGPFPNVKFVPTGG---------V-NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKA 195 (205)
T ss_dssp -------HHHHHHHHHTTCTTCEEEEBSS---------C-CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHH
T ss_pred -------CHHHHHHHHHhCCCCcEEEcCC---------C-CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHH
Confidence 112222223334 678776532 1 21 3667788899999988654333 45 6666665
Q ss_pred HHHHH
Q 007936 440 LRSVS 444 (584)
Q Consensus 440 m~~I~ 444 (584)
+.+++
T Consensus 196 ~~~~~ 200 (205)
T 1wa3_A 196 FVEKI 200 (205)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 144
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=65.74 E-value=8.3 Score=38.35 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=51.0
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCC-CceEEEeec--C-HHHHhcHHHHHHh-CCEEEEeCCcccc
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDS-DIAVIAKIE--S-IDSLKNLEEIILA-SDGAMVARGDLGA 361 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~-~i~IiAKIE--t-~~av~NldeIl~~-sDGImIaRGDLg~ 361 (584)
.+.+.+.|+|||-+||-.+.++++++++.. +. .+..+.-|- | .++++|+.+.++. +||+.++|.=+..
T Consensus 165 ~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~-----~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 165 ARIALELGADAMKIKYTGDPKTFSWAVKVA-----GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHHHHHTCSEEEEECCSSHHHHHHHHHHT-----TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHHcCCCEEEEcCCCCHHHHHHHHHhC-----CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 466789999999999976888888888765 22 355555553 3 5677789888887 8999999875544
No 145
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=65.49 E-value=9.7 Score=36.59 Aligned_cols=128 Identities=11% Similarity=0.101 Sum_probs=64.5
Q ss_pred CHhhh-HHhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhhcCCCCceEEEe--ecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 285 DWLDI-DFGITEGVDFIAIS-----FVKSAEVINHLKSYIAARSRDSDIAVIAK--IESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 285 D~~dI-~~al~~gvD~I~lS-----fV~saedV~~lr~~l~~~~~~~~i~IiAK--IEt~~av~NldeIl~~-sDGImIa 355 (584)
|..++ +...+.|+|+|-+. |+..... ..++++.+ . .+++++.. |.+++ .+++.++. +|+|.++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~--~--~~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQ--A--MDIKVELSGGIRDDD---TLAAALATGCTRVNLG 104 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHH--H--CSSEEEEESSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHH--h--cCCcEEEECCcCCHH---HHHHHHHcCCCEEEEC
Confidence 44433 55678999999873 4444444 44444432 1 13566664 66655 36666666 8999998
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhH-h-hhcCC---CCChhhHHHHHHHHHcccceEeecCCCCCC
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLE-S-MIEYP---TPTRAEVADVSEAVRQRADALMLSGESAMG 430 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLe-S-Mi~~p---~PTrAEv~Dv~nav~~G~D~imLs~ETa~G 430 (584)
+..|.- | ..+.+..+..|..++++-.... . .++.- .++..| .+..+...|+|.+++++-+.-|
T Consensus 105 ~~~l~~-------p---~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 105 TAALET-------P---EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp HHHHHC-------H---HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC----
T ss_pred chHhhC-------H---HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCccc
Confidence 765521 2 2333344455544444321110 0 00000 012222 2345667899999988766555
Q ss_pred CC
Q 007936 431 QF 432 (584)
Q Consensus 431 ~y 432 (584)
.+
T Consensus 173 ~~ 174 (244)
T 1vzw_A 173 TL 174 (244)
T ss_dssp --
T ss_pred cc
Confidence 43
No 146
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.13 E-value=49 Score=33.11 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=60.8
Q ss_pred hhhHHhHh-cCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEe
Q 007936 287 LDIDFGIT-EGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 287 ~dI~~al~-~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIa 355 (584)
+.++|-++ .|+|+|++ ++--|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKD-EAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHH-HhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 45578889 99999987 344555555555554432 2345689999984 47777766666555 8999987
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+-.+.- ...+.+...-+.| |.+.+.|+++-
T Consensus 107 ~P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 107 TPFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 554421 1223344444444 44557899874
No 147
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=64.99 E-value=40 Score=34.97 Aligned_cols=119 Identities=16% Similarity=0.202 Sum_probs=65.7
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEEc-------------CCCCHH----------------HHHHHHHHHHhhcC
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAIS-------------FVKSAE----------------VINHLKSYIAARSR 323 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~lS-------------fV~sae----------------dV~~lr~~l~~~~~ 323 (584)
||..|++.+ +.+.+.|+|+|=+- ..+... -++.+|+.+
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v----- 225 (365)
T 2gou_A 151 MTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI----- 225 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc-----
Confidence 566665544 45678999999883 333222 244444444
Q ss_pred CCCceEEEeecCH---------HHHhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHH-HHHHcCCCeEE
Q 007936 324 DSDIAVIAKIESI---------DSLKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQ-LCRQLNKPVIV 388 (584)
Q Consensus 324 ~~~i~IiAKIEt~---------~av~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~-~c~~~gKPviv 388 (584)
+.+ .|..||-.- ..++...++++. +|+|-+..+.+.-. + ..+ ...++ ..+..+.|||.
T Consensus 226 g~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~--~~~---~~~~~~i~~~~~iPvi~ 298 (365)
T 2gou_A 226 GAE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA-P--DTP---VSFKRALREAYQGVLIY 298 (365)
T ss_dssp CGG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-C--CCC---HHHHHHHHHHCCSEEEE
T ss_pred CCC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC-C--Ccc---HHHHHHHHHHCCCcEEE
Confidence 334 678888321 123333333333 69988876643211 1 111 12333 33455889887
Q ss_pred ehhhhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 389 ASQLLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 389 ATqmLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
... . |. .+...++..| +|+|++.
T Consensus 299 ~Gg---------i-~~---~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 299 AGR---------Y-NA---EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp ESS---------C-CH---HHHHHHHHTTSCSEEECC
T ss_pred eCC---------C-CH---HHHHHHHHCCCcceehhc
Confidence 632 3 33 3456778888 9999986
No 148
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=64.97 E-value=29 Score=35.01 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=60.3
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~-~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVS-VVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3456788999999987 334555555555554432 2244688999884 47777766666655 89999876
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 116 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 144 (301)
T 1xky_A 116 PYYNK-PSQEGMYQHFK---AIAESTPLPVMLY 144 (301)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54421 12233333333 4455568999874
No 149
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=64.94 E-value=83 Score=31.53 Aligned_cols=106 Identities=12% Similarity=0.179 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE
Q 007936 308 AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI 387 (584)
Q Consensus 308 aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi 387 (584)
.+.++.++++++.. .+.+++-+-..+.++-+++. +|.+-||-+++- +..+++.+-+.||||+
T Consensus 88 ~~gl~~l~~~~~~~----Gl~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~-----------n~~ll~~~a~~~kPV~ 149 (276)
T 1vs1_A 88 LEGLKLLRRAGDEA----GLPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ-----------NFPLLREVGRSGKPVL 149 (276)
T ss_dssp HHHHHHHHHHHHHH----TCCEEEECCCGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHc----CCcEEEecCCHHHHHHHHHh---CCeEEECccccc-----------CHHHHHHHHccCCeEE
Confidence 67888888887432 37899988888877766664 799999866652 2335566668899999
Q ss_pred EehhhhHhhhcCCCCChhhHHHHHHHHH-ccc-ceEeec-CCCCCCCChHHHHHH
Q 007936 388 VASQLLESMIEYPTPTRAEVADVSEAVR-QRA-DALMLS-GESAMGQFPDKALTV 439 (584)
Q Consensus 388 vATqmLeSMi~~p~PTrAEv~Dv~nav~-~G~-D~imLs-~ETa~G~yPveaV~~ 439 (584)
+.|.|- .|-.|+....+++. .|. +.+++= +=++.-.||.+.+.+
T Consensus 150 lk~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl 196 (276)
T 1vs1_A 150 LKRGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDV 196 (276)
T ss_dssp EECCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBH
T ss_pred EcCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCH
Confidence 986432 56788877777665 466 444433 444443566665543
No 150
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.78 E-value=42 Score=32.95 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=72.0
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEEEEeCC---ccccc
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGAMVARG---DLGAQ 362 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGImIaRG---DLg~e 362 (584)
+.+.+.|+|+|-+.-- .-.+.++|+++ +....|-+-+ .+.+|+.++ +|.|.+++- +.--.
T Consensus 106 ~lA~~~gAdGVHLg~~--dl~~~~~r~~~-----~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~ 172 (243)
T 3o63_A 106 DIARAAGADVLHLGQR--DLPVNVARQIL-----APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPG 172 (243)
T ss_dssp HHHHHHTCSEEEECTT--SSCHHHHHHHS-----CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC---
T ss_pred HHHHHhCCCEEEecCC--cCCHHHHHHhh-----CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCC
Confidence 3478899999998742 22356666665 2223333333 455555443 799999862 11111
Q ss_pred CCCCChHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHH
Q 007936 363 IPLEQVPSAQQKIVQLCRQ--LNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVL 440 (584)
Q Consensus 363 i~~e~V~~~Qk~II~~c~~--~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m 440 (584)
.+...+ +.+-+.+.. .++|++..- .. |. .++..+...|+|++.+.+.-..-..|.++++.+
T Consensus 173 ~~~~gl----~~l~~~~~~~~~~iPvvAiG---------GI-~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l 235 (243)
T 3o63_A 173 RAAPGL----GLVRVAAELGGDDKPWFAIG---------GI-NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQL 235 (243)
T ss_dssp --CCCH----HHHHHHHTC---CCCEEEES---------SC-CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred cchhhH----HHHHHHHHhccCCCCEEEec---------CC-CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHH
Confidence 111111 112222322 378988653 22 32 345667788999999876655567899999888
Q ss_pred HHHHH
Q 007936 441 RSVSL 445 (584)
Q Consensus 441 ~~I~~ 445 (584)
.....
T Consensus 236 ~~~~~ 240 (243)
T 3o63_A 236 RSALT 240 (243)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 151
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=64.76 E-value=58 Score=33.28 Aligned_cols=120 Identities=16% Similarity=0.150 Sum_probs=72.9
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|++.|.|+.+- | |..+....+...-..|++.+...+. .-++.+...+++.+-..
T Consensus 89 ~a~A~aa~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~--- 148 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIV------V-----PQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEG--- 148 (346)
T ss_dssp HHHHHHHHHTTCCEEEE------E-----ETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhCCCEEEE------E-----CCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCC---
Confidence 45667799999998875 1 3222233455556689998766432 35666655555433211
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc-CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL-EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l-~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
+...+.. .+ .........+.|+.+++ ..++||+.+-+|.+..-+++ ..|.+.||++-+..
T Consensus 149 -------~~i~~~~--np-~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 149 -------IMVHPNQ--EP-AVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp -------EECCSSS--CH-HHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -------EEECCCC--Ch-HHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 1111111 11 12223344456777766 57999999999998876654 47999999998764
No 152
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=64.25 E-value=47 Score=30.97 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=61.0
Q ss_pred hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceE-EEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCC
Q 007936 289 IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAV-IAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLE 366 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~I-iAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e 366 (584)
++...+.|+|+|-+- ..+++.++.++++.+. .+.++.| ...+.+. +.++..++. +|+|.++- .
T Consensus 25 ~~~~~~~G~~~i~l~-~~~~~~~~~i~~i~~~--~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~---------~ 89 (212)
T 2v82_A 25 VGAVIDAGFDAVEIP-LNSPQWEQSIPAIVDA--YGDKALIGAGTVLKP---EQVDALARMGCQLIVTPN---------I 89 (212)
T ss_dssp HHHHHHHTCCEEEEE-TTSTTHHHHHHHHHHH--HTTTSEEEEECCCSH---HHHHHHHHTTCCEEECSS---------C
T ss_pred HHHHHHCCCCEEEEe-CCChhHHHHHHHHHHh--CCCCeEEEeccccCH---HHHHHHHHcCCCEEEeCC---------C
Confidence 355678899999874 3456666666665532 1222222 1233343 346666666 89997432 1
Q ss_pred ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 367 QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 367 ~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
. ..+++.|++.|.++++. ..|..| +..+...|+|.+.+
T Consensus 90 ~-----~~~~~~~~~~g~~~~~g-----------~~t~~e---~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 H-----SEVIRRAVGYGMTVCPG-----------CATATE---AFTALEAGAQALKI 127 (212)
T ss_dssp C-----HHHHHHHHHTTCEEECE-----------ECSHHH---HHHHHHTTCSEEEE
T ss_pred C-----HHHHHHHHHcCCCEEee-----------cCCHHH---HHHHHHCCCCEEEE
Confidence 1 34578889999887653 124444 35677899999987
No 153
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=64.22 E-value=36 Score=33.47 Aligned_cols=100 Identities=13% Similarity=0.179 Sum_probs=56.1
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCCCh
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQV 368 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V 368 (584)
+..++.|++.|=+.+ ++++..+.++++-+ ... ++.|-+ -|.--.+..+..+++ +|.|+. ++
T Consensus 53 ~al~~gGi~~iEvt~-~t~~a~e~I~~l~~--~~~-~~~iGa--GTVlt~~~a~~Ai~AGA~fIvs-P~----------- 114 (232)
T 4e38_A 53 KVLAENGLPAAEITF-RSDAAVEAIRLLRQ--AQP-EMLIGA--GTILNGEQALAAKEAGATFVVS-PG----------- 114 (232)
T ss_dssp HHHHHTTCCEEEEET-TSTTHHHHHHHHHH--HCT-TCEEEE--ECCCSHHHHHHHHHHTCSEEEC-SS-----------
T ss_pred HHHHHCCCCEEEEeC-CCCCHHHHHHHHHH--hCC-CCEEeE--CCcCCHHHHHHHHHcCCCEEEe-CC-----------
Confidence 345667777777766 34443333333321 111 222222 233334444444444 666652 22
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 369 PSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 369 ~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
.-..+++.|+++|.|++-- -.-.+++..|...|+|.+-+
T Consensus 115 --~~~~vi~~~~~~gi~~ipG--------------v~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 115 --FNPNTVRACQEIGIDIVPG--------------VNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp --CCHHHHHHHHHHTCEEECE--------------ECSHHHHHHHHHTTCCEEEE
T ss_pred --CCHHHHHHHHHcCCCEEcC--------------CCCHHHHHHHHHcCCCEEEE
Confidence 1246888999999998521 11345678899999999987
No 154
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=64.18 E-value=28 Score=34.92 Aligned_cols=118 Identities=17% Similarity=0.143 Sum_probs=69.2
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE--eC-CcccccC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV--AR-GDLGAQI 363 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI--aR-GDLg~ei 363 (584)
+-++.+.+.|+|++++|=.-- ++..++++.++. .+ +..|--+=.....+.+.+|.+.++|++- .+ |==|..-
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~--~g--l~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~ 190 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEK--FG--IQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAET 190 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHH--TT--CEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC-------
T ss_pred HHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHH--cC--CeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCccc
Confidence 345677899999999986544 557778887743 23 3333333221234678899988765532 22 1111111
Q ss_pred CCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 364 PLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.++.-....++..+++ ..|+++.. ..=|. .++..++..|+|++...
T Consensus 191 ---~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 191 ---KANMPVHALLERLQQFDAPPALLGF---------GISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCEEECS---------SCCSH---HHHHHHHHTTCSEEEES
T ss_pred ---CCchhHHHHHHHHHHhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 2233345666766665 67999853 22233 34566888999999985
No 155
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.90 E-value=25 Score=35.47 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=59.4
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCC-CceEEEeec---CHHHHhcHHHHHHh-CCEEEEe
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDS-DIAVIAKIE---SIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~-~i~IiAKIE---t~~av~NldeIl~~-sDGImIa 355 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+. +++||+-+= |.++++.....-+. +||+|+-
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVE-TCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 34567889999999874 33344554444444432 2244 689999883 56666666666555 8999997
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+-.+.- ...+.+. +..-+.|.+.+.|+++-
T Consensus 111 ~P~y~~-~s~~~l~---~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 111 APYYNK-PTQQGLY---EHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCCSSC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCCCC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 654431 1223333 33344445558999874
No 156
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=63.59 E-value=27 Score=35.42 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=60.3
Q ss_pred hhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 288 DIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 288 dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaRG 357 (584)
.++|-++.|+|+|++. +.-|.++=.++.+... +..+.++.||+-+ -|.++++.....-+. +|++|+-+-
T Consensus 40 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~-~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 40 NLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVR-QAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHH-HTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHH-HHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4567888999999863 3345555555555543 2345678999987 456666666555555 899998543
Q ss_pred ccc-ccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 358 DLG-AQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 358 DLg-~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
..- .....+.+...-+.| |.+.+.|+++-
T Consensus 119 ~y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 332 122333444444444 45568999874
No 157
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=63.44 E-value=89 Score=29.29 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=59.2
Q ss_pred CHhhhHHhHhcCCCEEEEc-CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCccccc
Q 007936 285 DWLDIDFGITEGVDFIAIS-FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQ 362 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lS-fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~e 362 (584)
+.+++..+++.|+|+|.+- +=-+.++..++.+.+........ .++. . +.++...++ +|+|-++-.|+
T Consensus 31 ~l~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~-~l~v--~-----~~~~~a~~~gad~v~l~~~~~--- 99 (221)
T 1yad_A 31 ELARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKR-KLVM--N-----GRVDIALFSTIHRVQLPSGSF--- 99 (221)
T ss_dssp HHHHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGG-GEEE--E-----SCHHHHHTTTCCEEEECTTSC---
T ss_pred hHHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCC-eEEE--e-----ChHHHHHHcCCCEEEeCCCcc---
Confidence 3566888899999999774 22345555555555532211111 3332 2 345555555 89999875543
Q ss_pred CCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 363 IPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 363 i~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
.+..+++ ... |+.+++.. .|.. ++..+...|+|.++++.
T Consensus 100 ----~~~~~~~-----~~~-~~~ig~sv-----------~t~~---~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 100 ----SPKQIRA-----RFP-HLHIGRSV-----------HSLE---EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp ----CHHHHHH-----HCT-TCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEEC
T ss_pred ----CHHHHHH-----HCC-CCEEEEEc-----------CCHH---HHHHHHhCCCCEEEECC
Confidence 1111111 111 55566542 2333 35667789999999965
No 158
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.10 E-value=42 Score=34.51 Aligned_cols=132 Identities=11% Similarity=0.164 Sum_probs=68.5
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEcCC-------------CCH------------HHHHHHHHHHHhhcCCCC
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAISFV-------------KSA------------EVINHLKSYIAARSRDSD 326 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lSfV-------------~sa------------edV~~lr~~l~~~~~~~~ 326 (584)
.||..|++.+ +.+.+.|+|+|=+-.- +.. .-+.++.+.++ +..+.+
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR-~avG~d 219 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVR-EVVPRE 219 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHH-HHhcCC
Confidence 3677777666 4567899999876432 221 11233333332 233566
Q ss_pred ceEEEeecC---------H-HHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHH-HcCCCeEEehhhhH
Q 007936 327 IAVIAKIES---------I-DSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCR-QLNKPVIVASQLLE 394 (584)
Q Consensus 327 i~IiAKIEt---------~-~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~-~~gKPvivATqmLe 394 (584)
..|..||-- . ++++-+..+.+. +|.|-+.-|....+.....-+..+-..++..+ ..+.||+....
T Consensus 220 ~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg--- 296 (349)
T 3hgj_A 220 LPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGL--- 296 (349)
T ss_dssp SCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSS---
T ss_pred ceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECC---
Confidence 778888842 1 222222233333 79888875543322111000111223333333 34889887532
Q ss_pred hhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 395 SMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 395 SMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.-|. .+...++..| +|+|++.
T Consensus 297 ------i~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 297 ------ITTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp ------CCCH---HHHHHHHHTTSCSEEEES
T ss_pred ------CCCH---HHHHHHHHCCCceEEEec
Confidence 2233 2345678888 9999986
No 159
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=62.92 E-value=47 Score=33.49 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=60.3
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.+++||+-+= |.++++....--+. +||+|+-+
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVRE-EVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHH-HHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44577889999999873 34555555555444432 2244689999984 47777766666555 89999876
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 120 P~y~~-~~~~~l~~~f~---~ia~a~~lPiilY 148 (304)
T 3cpr_A 120 PYYSK-PSQEGLLAHFG---AIAAATEVPICLY 148 (304)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54421 12233333333 3455568999874
No 160
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=62.26 E-value=14 Score=38.81 Aligned_cols=48 Identities=27% Similarity=0.374 Sum_probs=38.1
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHH
Q 007936 108 KLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRR 155 (584)
Q Consensus 108 KIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 155 (584)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 455556655567899999999999999999999988766666666665
No 161
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=62.11 E-value=59 Score=33.94 Aligned_cols=125 Identities=8% Similarity=-0.009 Sum_probs=63.7
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEc-------------CCCCHHH------------HHHHHHHHHhhcCCCC
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAIS-------------FVKSAEV------------INHLKSYIAARSRDSD 326 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lS-------------fV~saed------------V~~lr~~l~~~~~~~~ 326 (584)
.||..|++.+ +.+.+.|+|+|=+- ..+...| +.++.+.+++ ..+.+
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~-avg~~ 233 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAE-VFGPE 233 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHH-HHCGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHH-HcCCC
Confidence 3566666555 45578899999873 3332221 2222222321 12434
Q ss_pred ceEEEeecC---HH------HHhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHH-HHHHcCCCeEEehh
Q 007936 327 IAVIAKIES---ID------SLKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQ-LCRQLNKPVIVASQ 391 (584)
Q Consensus 327 i~IiAKIEt---~~------av~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~-~c~~~gKPvivATq 391 (584)
.|..||-. .. .+++..++++. +|.|-+..|...-..+.+.+ ..++ ..+..+.|||...
T Consensus 234 -~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~-----~~~~~ik~~~~iPvi~~G- 306 (377)
T 2r14_A 234 -RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPE-----GFREQMRQRFKGGLIYCG- 306 (377)
T ss_dssp -GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCT-----THHHHHHHHCCSEEEEES-
T ss_pred -cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchH-----HHHHHHHHHCCCCEEEEC-
Confidence 78888822 11 12233333332 68888866543111111111 2222 2345588988763
Q ss_pred hhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 392 LLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 392 mLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.. + ..+...++..| +|+|++.
T Consensus 307 --------gi-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 307 --------NY-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp --------SC-C---HHHHHHHHHTTSCSEEEES
T ss_pred --------CC-C---HHHHHHHHHCCCceEEeec
Confidence 23 3 23456778887 9999996
No 162
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=62.03 E-value=30 Score=34.80 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=60.0
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ ++.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+.+
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAE-QAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH-HhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4457788999999886 334555555555544432 2234688999884 47777766666655 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 132 (297)
T 2rfg_A 104 GYYNR-PSQEGLYQHFK---MVHDAIDIPIIVY 132 (297)
T ss_dssp CTTTC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54421 12233333333 3445568898874
No 163
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.68 E-value=32 Score=32.73 Aligned_cols=119 Identities=9% Similarity=0.114 Sum_probs=64.6
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCce--EEEe-------ecCH-------HHHhcHHHHH
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIA--VIAK-------IESI-------DSLKNLEEII 346 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~--IiAK-------IEt~-------~av~NldeIl 346 (584)
+.++++.+++.|+|.|.+.. ..+++.+.++.+.+ +..+. +=++ +++. ..++.++...
T Consensus 85 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~-----g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~ 159 (244)
T 2y88_A 85 DDESLAAALATGCARVNVGTAALENPQWCARVIGEH-----GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLD 159 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH-----GGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc-----CCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHH
Confidence 45678889999999998864 34555555555554 11111 1122 2222 2244455555
Q ss_pred Hh-CCEEEEeCCcccccC-CCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc---ccceE
Q 007936 347 LA-SDGAMVARGDLGAQI-PLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ---RADAL 421 (584)
Q Consensus 347 ~~-sDGImIaRGDLg~ei-~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~---G~D~i 421 (584)
+. +|.|++-..+..-.. ++ .+..+ +++ +...+.|++... ..-+. .|+..+... |+|++
T Consensus 160 ~~G~~~i~~~~~~~~~~~~g~-~~~~~-~~l---~~~~~ipvia~G---------GI~~~---~d~~~~~~~~~~Gad~v 222 (244)
T 2y88_A 160 SEGCSRFVVTDITKDGTLGGP-NLDLL-AGV---ADRTDAPVIASG---------GVSSL---DDLRAIATLTHRGVEGA 222 (244)
T ss_dssp HTTCCCEEEEETTTTTTTSCC-CHHHH-HHH---HTTCSSCEEEES---------CCCSH---HHHHHHHTTGGGTEEEE
T ss_pred hCCCCEEEEEecCCccccCCC-CHHHH-HHH---HHhCCCCEEEEC---------CCCCH---HHHHHHHhhccCCCCEE
Confidence 55 788877443332111 22 22222 222 234588998763 33333 455555555 99999
Q ss_pred eecC
Q 007936 422 MLSG 425 (584)
Q Consensus 422 mLs~ 425 (584)
|+..
T Consensus 223 ~vG~ 226 (244)
T 2y88_A 223 IVGK 226 (244)
T ss_dssp EECH
T ss_pred EEcH
Confidence 9863
No 164
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=61.59 E-value=25 Score=35.56 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=59.2
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +--|.++=.++.+...+ ..+.++.||+-+ -|.++++.....-+. +||+|+-+
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLE-AVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHH-HhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 34567889999998874 33344555555444432 224568999988 456666666655555 89999975
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+. +.+..-..|.+.+.|+++-
T Consensus 119 P~y~~-~s~~~---l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 119 PYYSK-PPQRG---LQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CCSSC-CCHHH---HHHHHHHHHTSCSSCEEEE
T ss_pred CCCCC-CCHHH---HHHHHHHHHHhcCCCEEEE
Confidence 44322 12223 3333444455568999875
No 165
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=61.48 E-value=32 Score=34.84 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=59.9
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++=.++.+...+ ..+.+++||+-+= |.++++....--+. +||+|+-+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~-~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLE-IVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHH-HHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHH-HhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 3456778999999987 344555555555554432 2244688999884 47777666666555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 116 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 144 (306)
T 1o5k_A 116 PYYNK-PTQEGLYQHYK---YISERTDLGIVVY 144 (306)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 54421 12233333333 3345568898874
No 166
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=61.43 E-value=48 Score=32.09 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=69.8
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHH----HHHHh-----CCEEEEeCCc
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLE----EIILA-----SDGAMVARGD 358 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~Nld----eIl~~-----sDGImIaRGD 358 (584)
.++...+.|+|+|.+.-.-..+.++.+.+.++.. +..+.+++..-++.+.+.++ .+++. .||++++
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~--g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~--- 157 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEM--GREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGP--- 157 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHH--TCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECC---
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhc--CCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEEC---
Confidence 3455678999999997666677788888888532 33455556776655433322 22222 4676643
Q ss_pred ccccCCCCChHHHHHHHHHHHHHcCC-CeEEehhhhHhhhcCCCCC-hhhHHHHHHHHHcccceEeecCCCCCCCChHHH
Q 007936 359 LGAQIPLEQVPSAQQKIVQLCRQLNK-PVIVASQLLESMIEYPTPT-RAEVADVSEAVRQRADALMLSGESAMGQFPDKA 436 (584)
Q Consensus 359 Lg~ei~~e~V~~~Qk~II~~c~~~gK-PvivATqmLeSMi~~p~PT-rAEv~Dv~nav~~G~D~imLs~ETa~G~yPvea 436 (584)
..+ +..-+.|-+. .|. ..++ | |- +++-.+. .++..|+|.+....--.....|.++
T Consensus 158 ------at~-~~e~~~ir~~---~~~~~~iv-~-----------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a 214 (228)
T 3m47_A 158 ------STR-PERLSRLREI---IGQDSFLI-S-----------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAA 214 (228)
T ss_dssp ------SSC-HHHHHHHHHH---HCSSSEEE-E-----------CC----------CGGGTCSEEEECHHHHTSSCHHHH
T ss_pred ------CCC-hHHHHHHHHh---cCCCCEEE-e-----------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHH
Confidence 211 1111222222 243 2233 2 21 3333456 7889999998887555555688888
Q ss_pred HHHHHHHH
Q 007936 437 LTVLRSVS 444 (584)
Q Consensus 437 V~~m~~I~ 444 (584)
++.+.+..
T Consensus 215 ~~~~~~~~ 222 (228)
T 3m47_A 215 AAGAIESI 222 (228)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 87765543
No 167
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=61.30 E-value=68 Score=31.16 Aligned_cols=129 Identities=15% Similarity=0.209 Sum_probs=76.4
Q ss_pred hhHHhHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 288 DIDFGITEGVDFIAI-----SFVKS----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 288 dI~~al~~gvD~I~l-----SfV~s----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRG 357 (584)
+++.. +.|+||+-+ .||.+ ...++.+|+.. +..+-+--||+.++.. ++...++ +|+|.+-
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-----~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh-- 87 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-----TKPLDCHLMVTRPQDY--IAQLARAGADFITLH-- 87 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-----CSCEEEEEESSCGGGT--HHHHHHHTCSEEEEC--
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-----CCcEEEEEEecCHHHH--HHHHHHcCCCEEEEC--
Confidence 34455 788887532 33333 55666665532 3346788888887553 6777777 8999874
Q ss_pred cccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee-cCCCCCC--CChH
Q 007936 358 DLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML-SGESAMG--QFPD 434 (584)
Q Consensus 358 DLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL-s~ETa~G--~yPv 434 (584)
.|-+ .+. -++.++.++++|+-++++. ||. |..| ....+.+++|.+++ |-+.-.| +|.-
T Consensus 88 ---~Ea~---~~~-~~~~i~~i~~~G~k~gv~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 88 ---PETI---NGQ-AFRLIDEIRRHDMKVGLIL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp ---GGGC---TTT-HHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCT
T ss_pred ---cccC---Ccc-HHHHHHHHHHcCCeEEEEE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccH
Confidence 1220 111 3588999999999999983 332 2222 13344678998864 4454333 3554
Q ss_pred HHHHHHHHHHH
Q 007936 435 KALTVLRSVSL 445 (584)
Q Consensus 435 eaV~~m~~I~~ 445 (584)
.+++.++++.+
T Consensus 149 ~~l~kI~~lr~ 159 (231)
T 3ctl_A 149 EMLDKLAELKA 159 (231)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555544433
No 168
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.84 E-value=25 Score=36.37 Aligned_cols=98 Identities=16% Similarity=0.140 Sum_probs=60.7
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve-~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAID-HVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44577889999998873 44555555555554432 2244688999884 57777766666655 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+. .|.+.+.|+++-
T Consensus 135 P~Y~~-~s~~~l~~~f~~---VA~a~~lPiilY 163 (343)
T 2v9d_A 135 PYYWK-VSEANLIRYFEQ---VADSVTLPVMLY 163 (343)
T ss_dssp CSSSC-CCHHHHHHHHHH---HHHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 54421 122333333333 445568999874
No 169
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=60.54 E-value=40 Score=32.17 Aligned_cols=132 Identities=13% Similarity=0.173 Sum_probs=66.9
Q ss_pred CHhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCceEEEe-----ecCH-------HHHhcHHHHHHh-C
Q 007936 285 DWLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIAVIAK-----IESI-------DSLKNLEEIILA-S 349 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~IiAK-----IEt~-------~av~NldeIl~~-s 349 (584)
+.++++.+++.|+|.|.+.. ..+++.+.++.+.+ +..+.+-.. +++. ..++.+.+..+. +
T Consensus 86 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~-----g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~ 160 (244)
T 1vzw_A 86 DDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEH-----GDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGC 160 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH-----GGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHc-----CCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCC
Confidence 45678889999999998763 24444455554444 222222121 2322 234444555555 7
Q ss_pred CEEEEeCC--cccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc---ccceEeec
Q 007936 350 DGAMVARG--DLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ---RADALMLS 424 (584)
Q Consensus 350 DGImIaRG--DLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~---G~D~imLs 424 (584)
|.|++--. |.. ..++ .+ ..-++ .+...+.|++... ..-+. .|+..+... |+|++++.
T Consensus 161 ~~i~~~~~~~~~~-~~g~-~~-~~~~~---i~~~~~ipvia~G---------GI~~~---~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 161 ARYVVTDIAKDGT-LQGP-NL-ELLKN---VCAATDRPVVASG---------GVSSL---DDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CCEEEEEC--------CC-CH-HHHHH---HHHTCSSCEEEES---------CCCSH---HHHHHHHTTGGGTEEEEEEC
T ss_pred CEEEEeccCcccc-cCCC-CH-HHHHH---HHHhcCCCEEEEC---------CCCCH---HHHHHHHhhccCCCceeeee
Confidence 87776421 111 1121 22 12222 2344589999763 23333 455556666 99999987
Q ss_pred CCCCCCCCh-HHHHHH
Q 007936 425 GESAMGQFP-DKALTV 439 (584)
Q Consensus 425 ~ETa~G~yP-veaV~~ 439 (584)
.---.+.++ .++++.
T Consensus 223 ~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 223 KALYAKAFTLEEALEA 238 (244)
T ss_dssp HHHHTTSSCHHHHHHH
T ss_pred HHHHcCCCCHHHHHHH
Confidence 433334433 334443
No 170
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=60.52 E-value=12 Score=40.97 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=42.7
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHH
Q 007936 105 RRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRR 155 (584)
Q Consensus 105 r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 155 (584)
.+..+-+.+|......+.++.|+++|+++.=+|.+||..+...++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 355677788887777899999999999999999999988877777777765
No 171
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=60.48 E-value=34 Score=32.23 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=69.8
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH----HhcHHHHHHh-----CCEEEEeC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS----LKNLEEIILA-----SDGAMVAR 356 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a----v~NldeIl~~-----sDGImIaR 356 (584)
...++...+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-.... .+.++.++.. .||+-+.+
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~------~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~ 140 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVGRDSVMAVKE------LG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPG 140 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCHHHHHHHHT------TS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCC
T ss_pred HHHHHHHHhcCCCEEEEeccCCHHHHHHHHH------hC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECC
Confidence 3456677899999998887666655444432 12 3555555433221 3445555443 56775542
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHH
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLN-KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDK 435 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~g-KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPve 435 (584)
. .++++ +++-+.| + .++++.- .-.+. -.++..++..|+|.+....--....-|.+
T Consensus 141 ~------~~~~i----~~lr~~~---~~~~~iv~g--------GI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~ 196 (208)
T 2czd_A 141 T------RPERI----GYIRDRL---KEGIKILAP--------GIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPRE 196 (208)
T ss_dssp S------STHHH----HHHHHHS---CTTCEEEEC--------CCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred C------ChHHH----HHHHHhC---CCCeEEEEC--------CCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHH
Confidence 1 12233 2232233 4 3556541 11222 22467778889999997644434456888
Q ss_pred HHHHHHHH
Q 007936 436 ALTVLRSV 443 (584)
Q Consensus 436 aV~~m~~I 443 (584)
+++.+++.
T Consensus 197 ~~~~l~~~ 204 (208)
T 2czd_A 197 AAKAIYDE 204 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 172
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=60.24 E-value=11 Score=36.28 Aligned_cols=62 Identities=23% Similarity=0.280 Sum_probs=44.3
Q ss_pred eEeeCCCEEEEeecc---cCCCCCCCEEEecccchhc--ccCCCCEEEEe--CCeeEEEEEEEeCCeEE
Q 007936 186 ARAEDGEIWTFTVRA---FDSPRPERTITVNYDGFAE--DVKVGDELLVD--GGMVRFEVIEKIGPDVK 247 (584)
Q Consensus 186 i~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~~--~v~vGd~I~id--DG~i~l~V~~~~~~~i~ 247 (584)
.-++.|++++|+... |-...++....++...|.. .+++|+.+.+. +|.+..+|+++.++.|+
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 346799999998763 3223444566677777764 58999999997 46667778888877655
No 173
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=60.15 E-value=12 Score=39.08 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=43.5
Q ss_pred HhhhHHhHhcCCCEEEEcC---------CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEE
Q 007936 286 WLDIDFGITEGVDFIAISF---------VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGA 352 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSf---------V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGI 352 (584)
.++.+.+.+.|+|+|.+|. .-+.+-+.++++.+ +.++.||+- -|+.+-++++++ +|++
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v-----~~~ipVia~----GGI~~g~D~~kalalGAd~V 310 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV-----NKRVPIVFD----SGVRRGEHVAKALASGADVV 310 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH-----TTSSCEEEC----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh-----CCCCeEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 5778889999999999964 23445566666655 234777762 456666666655 8999
Q ss_pred EEeC
Q 007936 353 MVAR 356 (584)
Q Consensus 353 mIaR 356 (584)
||||
T Consensus 311 ~iGr 314 (368)
T 2nli_A 311 ALGR 314 (368)
T ss_dssp EECH
T ss_pred EECH
Confidence 9997
No 174
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=59.98 E-value=30 Score=33.21 Aligned_cols=131 Identities=15% Similarity=0.181 Sum_probs=68.3
Q ss_pred hHHhHhcCCCEEEEcCC---CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcc-cccCC
Q 007936 289 IDFGITEGVDFIAISFV---KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDL-GAQIP 364 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV---~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDL-g~ei~ 364 (584)
+..+.+.|+|+|.+..- ...+++.++.+.+.. . .+.++.-+-+.+-.+.+.++ -.+-|-+.+.++ | .|
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~--~--Gl~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG 146 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKN--L--GLETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TG 146 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHH--H--TCEEEEEESSSHHHHHHTTT--CCSEEEECCCC-------
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHH--C--CCeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cC
Confidence 46678999999999885 445566666665532 2 35555555333323322222 135666777676 2 22
Q ss_pred C---CChHH-HHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHH
Q 007936 365 L---EQVPS-AQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALT 438 (584)
Q Consensus 365 ~---e~V~~-~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~ 438 (584)
. ..-+. ++ .+.+..++. +.|++.- ...=+. .++..+...|+|+++..+-.-.-..|.+.++
T Consensus 147 ~~~~t~~~~~~~-~~~~~ir~~~~~~~ii~g---------gGI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~ 213 (219)
T 2h6r_A 147 IPVSKANPEVVE-GTVRAVKEINKDVKVLCG---------AGISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIR 213 (219)
T ss_dssp ---------CSH-HHHHHHHHHCTTCEEEEC---------SSCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHH
T ss_pred CCCccCCHHHHH-HHHHHHHhccCCCeEEEE---------eCcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHH
Confidence 0 00111 22 344444444 5676653 222222 3445566779999998644444455666655
Q ss_pred HH
Q 007936 439 VL 440 (584)
Q Consensus 439 ~m 440 (584)
-|
T Consensus 214 ~l 215 (219)
T 2h6r_A 214 EL 215 (219)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 175
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=59.56 E-value=12 Score=39.28 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=40.8
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
+..+.+.+|......+.++.++++|++++=||++||+++...++++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677788655567889999999999999999999987777777777754
No 176
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=59.52 E-value=55 Score=32.53 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=73.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++.+- .|.......+...-..|++.+...++. . ..++.+...++..+ +.+
T Consensus 76 a~A~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~~~---~-~~~~~~~a~~l~~~-~~~--- 136 (304)
T 1ve1_A 76 GLAMIAASRGYRLILT-----------MPAQMSEERKRVLKAFGAELVLTDPER---R-MLAAREEALRLKEE-LGA--- 136 (304)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTTT---H-HHHHHHHHHHHHHH-HTC---
T ss_pred HHHHHHHHcCCcEEEE-----------eCCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHhc-CCC---
Confidence 4667889999998875 222222344455566799988765432 1 24555554444333 111
Q ss_pred hhhhhcccCCCCCCCCCcChHHH-HHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEE-ICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~-ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
+...+.. .+.. ... ....+.|+.++++ .++||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 137 ------~~~~~~~--n~~~-~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 137 ------FMPDQFK--NPAN-VRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp ------BCCCTTT--CHHH-HHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred ------EeCCCCC--ChhH-HHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 1111111 1111 112 2344677777774 7999999999999877665 469999999988654
No 177
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=59.36 E-value=1e+02 Score=29.92 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=51.6
Q ss_pred CHhhhHHhHhcCCCEEEE--cCCC--------------------CHHHHHHHHHHHHhhcCCCCceEEEee-cCHHHHhc
Q 007936 285 DWLDIDFGITEGVDFIAI--SFVK--------------------SAEVINHLKSYIAARSRDSDIAVIAKI-ESIDSLKN 341 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~l--SfV~--------------------saedV~~lr~~l~~~~~~~~i~IiAKI-Et~~av~N 341 (584)
-.+.++...+.|+|+|-+ ||.. +.++..++.+.++.. .+++++.+. .++.-...
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~---~~~Pv~~m~~~~~~~~~~ 110 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE---LSCPVVLLSYYKPIMFRS 110 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG---CSSCEEEECCSHHHHSCC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---CCCCEEEEecCcHHHHHH
Confidence 345566677889999777 4431 233333333444211 246677664 22211123
Q ss_pred HHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 342 LEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 342 ldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
++...++ +||+++. |+.. ++ -++++..|+++|.+.++.
T Consensus 111 ~~~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~~ 149 (262)
T 1rd5_A 111 LAKMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVLL 149 (262)
T ss_dssp THHHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECEE
T ss_pred HHHHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEEE
Confidence 3444544 8999983 5543 33 356778899999886653
No 178
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=59.23 E-value=30 Score=35.02 Aligned_cols=126 Identities=13% Similarity=0.150 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 007936 371 AQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKW 450 (584)
Q Consensus 371 ~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~ 450 (584)
.=.-+...|++.|.++.+- .|..+....+...-..|++.+...++. . ..++++...++..+-..+
T Consensus 84 ~g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~l~~~~~~~ 148 (325)
T 3dwg_A 84 TGISLAMAARLKGYRLICV-----------MPENTSVERRQLLELYGAQIIFSAAEG---G-SNTAVATAKELAATNPSW 148 (325)
T ss_dssp HHHHHHHHHHHHTCEEEEE-----------EESSSCHHHHHHHHHHTCEEEEECSTT---T-HHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCe
Confidence 3356677889999998875 233333334455566799988776431 2 245655544443221111
Q ss_pred hhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC-CcEEEEccCCchHHHHHhcc----CCCCcEEEEcCch
Q 007936 451 WREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE-VDALFVYTKTGHMASLLSRC----RPDCPIFAFTSTT 522 (584)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~-a~aIvv~T~sG~tA~~lSr~----RP~~PIiavT~~~ 522 (584)
+...+.. .+..+.......+.++.++++ .++||+.+-+|.+..-++++ .|.+.|+++.+..
T Consensus 149 ---------~~~~~~~--np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 149 ---------VMLYQYG--NPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp ---------BCCCTTT--CHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred ---------EeCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 1111111 111111223445667777764 89999999999998666554 7999999998754
No 179
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=58.89 E-value=74 Score=32.30 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|++.|.++++- .|.......+...-..|++.+...+ . ..++.+...++.++- .
T Consensus 101 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~--- 159 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-G--- 159 (342)
T ss_dssp HHHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-C---
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-C---
Confidence 35667889999998875 2333333445556667998775442 2 245555544443321 1
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc-CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCc
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL-EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTST 521 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l-~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~ 521 (584)
.+...+.. .+ .........+.|+.+++ +.++||+.+-+|.++.-+++ ..|.+.|+++.+.
T Consensus 160 ------~~~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~ 224 (342)
T 2gn0_A 160 ------RIFIPPYD--DP-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAE 224 (342)
T ss_dssp ------CEECCSSS--SH-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEET
T ss_pred ------CEEeCCCC--CH-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeC
Confidence 11111111 11 11223344467777777 48999999999999876665 4699999999885
No 180
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=58.76 E-value=28 Score=35.04 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=58.7
Q ss_pred hhhHHhHhcCCCEEEEcCC------CCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAISFV------KSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV------~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++.=- -|.++=.++.+...+ ..+.++.||+-+= |.++++.....-+. +||+|+-+
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVK-HVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHH-HhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3456788999999987422 244444444444422 2234688998883 56666666665555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+.. ..-..|.+.+.|+++-
T Consensus 111 P~y~~-~~~~~l~~---~f~~va~a~~lPiilY 139 (297)
T 3flu_A 111 PYYNK-PSQEGIYQ---HFKTIAEATSIPMIIY 139 (297)
T ss_dssp CCSSC-CCHHHHHH---HHHHHHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHH---HHHHHHHhCCCCEEEE
Confidence 54421 12233333 3344445568999875
No 181
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=58.61 E-value=26 Score=35.77 Aligned_cols=98 Identities=11% Similarity=0.146 Sum_probs=58.2
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +-=|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~-~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVE-QVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHH-HhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 34567889999999852 22344444444444432 2244688998883 56666666666555 89999876
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 126 P~y~~-~~~~~l~~~f~---~va~a~~lPiilY 154 (315)
T 3si9_A 126 PYYNR-PNQRGLYTHFS---SIAKAISIPIIIY 154 (315)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHcCCCCEEEE
Confidence 54421 12233333333 4445558999875
No 182
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=58.54 E-value=36 Score=34.55 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=55.7
Q ss_pred hhhHHhHhcCCCEEEEcC------CCCHHHHHHHHHHHHhhcCCCCceEEEee--cCHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 287 LDIDFGITEGVDFIAISF------VKSAEVINHLKSYIAARSRDSDIAVIAKI--ESIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSf------V~saedV~~lr~~l~~~~~~~~i~IiAKI--Et~~av~NldeIl~~-sDGImIaRG 357 (584)
+.++|-++.|+|+|++.= --|.++=.++.+...+ ..+.+++||+-+ -|.++++.....-+. +||+|+-+-
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~-~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVE-YVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHH-HhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 345678899999988642 2244444444444432 224568999988 334444444444433 899998643
Q ss_pred cccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 358 DLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 358 DLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
... ....+.+...-+.|.+ +.+.|+++-
T Consensus 116 ~y~-~~s~~~l~~~f~~va~---a~~lPiilY 143 (316)
T 3e96_A 116 IHP-YVTAGGVYAYFRDIIE---ALDFPSLVY 143 (316)
T ss_dssp CCS-CCCHHHHHHHHHHHHH---HHTSCEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 331 1222344444444444 447999875
No 183
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.41 E-value=14 Score=38.49 Aligned_cols=46 Identities=20% Similarity=0.358 Sum_probs=36.7
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHH
Q 007936 108 KLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRR 155 (584)
Q Consensus 108 KIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 155 (584)
.+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 97 pvga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 97 RVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CCEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred eEEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 3556666543 899999999999999999999988777667666665
No 184
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=58.27 E-value=51 Score=32.58 Aligned_cols=129 Identities=20% Similarity=0.293 Sum_probs=77.3
Q ss_pred hhhHHhHhcCCCEEEE-----cCCC----CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI-----SFVK----SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l-----SfV~----saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaR 356 (584)
++++...+.|+|++-+ .||- -+.-++++|+.. .+..+-+=-||++++.. ++...++ +|.|-+.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~----p~~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH- 116 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG----ITAGMDVHLMVKPVDAL--IESFAKAGATSIVFH- 116 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHT----CCSCEEEEEECSSCHHH--HHHHHHHTCSEEEEC-
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhC----CCCeEEEEEeeCCHHHH--HHHHHHcCCCEEEEc-
Confidence 4456666789999887 7764 356677777653 01223444678888764 6777776 8999885
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCC-CCChhhHHHHHHHHHcccceEee-cCCCCCCC--C
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYP-TPTRAEVADVSEAVRQRADALML-SGESAMGQ--F 432 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p-~PTrAEv~Dv~nav~~G~D~imL-s~ETa~G~--y 432 (584)
.|-+ +. -.+.++.++++|+-++++. || +|- .. ...+.++.|.+++ |-+...|- |
T Consensus 117 ----~Ea~-~~----~~~~i~~ir~~G~k~Gval--------np~Tp~-e~----l~~~l~~vD~VlvMsV~PGfgGQ~f 174 (246)
T 3inp_A 117 ----PEAS-EH----IDRSLQLIKSFGIQAGLAL--------NPATGI-DC----LKYVESNIDRVLIMSVNPGFGGQKF 174 (246)
T ss_dssp ----GGGC-SC----HHHHHHHHHTTTSEEEEEE--------CTTCCS-GG----GTTTGGGCSEEEEECSCTTC--CCC
T ss_pred ----cccc-hh----HHHHHHHHHHcCCeEEEEe--------cCCCCH-HH----HHHHHhcCCEEEEeeecCCCCCccc
Confidence 1211 22 2577888899999999984 23 222 11 2344567998876 43443332 3
Q ss_pred hHHHHHHHHHHH
Q 007936 433 PDKALTVLRSVS 444 (584)
Q Consensus 433 PveaV~~m~~I~ 444 (584)
--++++.++++.
T Consensus 175 i~~~l~KI~~lr 186 (246)
T 3inp_A 175 IPAMLDKAKEIS 186 (246)
T ss_dssp CTTHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 334444444443
No 185
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=58.06 E-value=47 Score=33.19 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=58.9
Q ss_pred hhhHHhHhcCCCEEEEcCCC------CHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAISFVK------SAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~------saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++.=-. |.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +|++|+-+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIR-VANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHH-HhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 44578889999998764322 34444444444432 2244688998883 56666666665555 89999876
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+...-+. .|.+.+.|+++-
T Consensus 105 P~y~~-~~~~~l~~~f~~---ia~a~~lPiilY 133 (291)
T 3tak_A 105 PYYNK-PTQEGLYQHYKA---IAEAVELPLILY 133 (291)
T ss_dssp CCSSC-CCHHHHHHHHHH---HHHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 54431 122334433344 444558999975
No 186
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=58.02 E-value=46 Score=35.73 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=58.8
Q ss_pred Cce-EEEeecCHHHHhcHHHHHHh-----CCEEEEeCCcccccCCC----------C---ChHHHHHHHHHHHH-Hc--C
Q 007936 326 DIA-VIAKIESIDSLKNLEEIILA-----SDGAMVARGDLGAQIPL----------E---QVPSAQQKIVQLCR-QL--N 383 (584)
Q Consensus 326 ~i~-IiAKIEt~~av~NldeIl~~-----sDGImIaRGDLg~ei~~----------e---~V~~~Qk~II~~c~-~~--g 383 (584)
+.. |+.||=--...+++.+|++. +|||.+.-+-. ..+.+ . ..+.. -.+++..+ +. .
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~-~~~d~~~~~~~~GGlSG~~~~~~s-l~~i~~v~~~v~~~ 373 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT-QINDIKSFENKKGGVSGAKLKDIS-TKFICEMYNYTNKQ 373 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS-CCCCCGGGTTCCSEEEEHHHHHHH-HHHHHHHHHHTTTC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc-ccccccccccccCCcCCCcchHHH-HHHHHHHHHHcCCC
Confidence 466 89999321112245555544 79998764421 11111 0 12222 34444444 44 7
Q ss_pred CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCC-CCChHHHHHHHHHHHHHHhhhhh
Q 007936 384 KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAM-GQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 384 KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~-G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.|||...-+. ...|+..++..|||+|++..--.. | | .+..+|.+..+.|+.
T Consensus 374 iPVIg~GGI~------------s~~DA~e~l~aGAd~Vqigrall~~g--P----~l~~~i~~~l~~~l~ 425 (443)
T 1tv5_A 374 IPIIASGGIF------------SGLDALEKIEAGASVCQLYSCLVFNG--M----KSAVQIKRELNHLLY 425 (443)
T ss_dssp SCEEEESSCC------------SHHHHHHHHHTTEEEEEESHHHHHHG--G----GHHHHHHHHHHHHHH
T ss_pred CcEEEECCCC------------CHHHHHHHHHcCCCEEEEcHHHHhcC--h----HHHHHHHHHHHHHHH
Confidence 8998764322 345778889999999999733222 2 2 255666666655543
No 187
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=57.86 E-value=57 Score=31.46 Aligned_cols=130 Identities=14% Similarity=0.089 Sum_probs=61.6
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCCC--HHHHHHHHHHHHhhcCC--CCceEEEe-----------ecCHH--------HHh
Q 007936 284 KDWLDIDFGITEGVDFIAISFVKS--AEVINHLKSYIAARSRD--SDIAVIAK-----------IESID--------SLK 340 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~s--aedV~~lr~~l~~~~~~--~~i~IiAK-----------IEt~~--------av~ 340 (584)
.+.+++..+++.|+|.|.+.-.-- ..+...++++++ ..+ .+ .++.- +++.. ..+
T Consensus 84 ~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~--~~g~~~~-~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e 160 (266)
T 2w6r_A 84 GKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLK--KHGGSGQ-AVVVAIDAKRVDGEFMVFTHSGKKNTGILLRD 160 (266)
T ss_dssp CSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC------CCC-EEEEEEEEEEETTEEEEEETTTTEEEEEEHHH
T ss_pred CCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH--HcCCCCC-EEEEEEEEEecCCCEEEEECCCceecchhHHH
Confidence 346778888899999998874321 114455555552 222 11 22222 22211 122
Q ss_pred cHHHHHHh-CCEEEEeC-CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHccc
Q 007936 341 NLEEIILA-SDGAMVAR-GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRA 418 (584)
Q Consensus 341 NldeIl~~-sDGImIaR-GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~ 418 (584)
-+..+.+. ++.|++-. .-=|...+. .+ +.+-+.+...+.|++... ..-+.. |+..+...|+
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~G---------GI~~~e---d~~~~~~~Ga 223 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGY-DT----EMIRFVRPLTTLPIIASG---------GAGKME---HFLEAFLAGA 223 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCC-CH----HHHHHHGGGCCSCEEEES---------CCCSHH---HHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCC-CH----HHHHHHHHHcCCCEEEeC---------CCCCHH---HHHHHHHcCC
Confidence 22333333 67887732 111122222 21 222223344589998763 333444 5555556799
Q ss_pred ceEeecCCCCCCCCh
Q 007936 419 DALMLSGESAMGQFP 433 (584)
Q Consensus 419 D~imLs~ETa~G~yP 433 (584)
|++++..---.+.++
T Consensus 224 dgv~vgsal~~~~~~ 238 (266)
T 2w6r_A 224 DAALAASVFHFREID 238 (266)
T ss_dssp SEEEESTTTC-----
T ss_pred HHHHccHHHHcCCCC
Confidence 999997544444433
No 188
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=57.76 E-value=96 Score=30.61 Aligned_cols=144 Identities=10% Similarity=0.088 Sum_probs=81.2
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHH----Hh----C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII----LA----S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl----~~----s 349 (584)
|..|..|.+.+ +.+.+.|++.|+++ +..+..+++.++ +..++|.+=|=-+.|-...+.-+ .+ +
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~----~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK----GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGA 109 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT----TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC----CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCC
Confidence 44566666543 66788999999985 566788888883 34577776674444433322221 11 4
Q ss_pred CEEEEeCCcccccCCC---CChHHHHHH---HHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEe
Q 007936 350 DGAMVARGDLGAQIPL---EQVPSAQQK---IVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALM 422 (584)
Q Consensus 350 DGImIaRGDLg~ei~~---e~V~~~Qk~---II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~im 422 (584)
|.|=+ -+.++. .+...+.+. +.+.|...-.+||+-|-.| |..|+..... +...|+|.|=
T Consensus 110 dEIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVK 175 (239)
T 3ngj_A 110 EEVDM-----VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVK 175 (239)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEE
T ss_pred CEEEE-----EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEE
Confidence 54321 112221 234444444 4445532224556555433 6677766655 5678999987
Q ss_pred ecCCCCCCCChHHHHHHHHHHH
Q 007936 423 LSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 423 Ls~ETa~G~yPveaV~~m~~I~ 444 (584)
-|.==..|---++.|+.|++.+
T Consensus 176 TSTGf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 176 TSTGFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhh
Confidence 7621112233468899998875
No 189
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=57.47 E-value=39 Score=33.83 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=58.6
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ ++.-|.++=.++.+...+ ..+.+++||+-+= |.++++....--+. +||+|+.+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIK-TANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4557788999999886 234455555554444432 2234688998884 46777666666555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEE
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIV 388 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPviv 388 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++
T Consensus 104 P~y~~-~s~~~l~~~f~---~ia~a~~lPiil 131 (292)
T 2vc6_A 104 PYYNK-PTQEGIYQHFK---AIDAASTIPIIV 131 (292)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCSSCEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCCEEE
Confidence 54421 12233333333 345566899987
No 190
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=57.08 E-value=67 Score=33.17 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=68.7
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEcCC-------------CCH------------HHHHHHHHHHHhhcCCCC
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAISFV-------------KSA------------EVINHLKSYIAARSRDSD 326 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lSfV-------------~sa------------edV~~lr~~l~~~~~~~~ 326 (584)
.||..|++.+ +.+.+.|+|+|=+-.- +.. .-+.++.+.++ ...+.+
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr-~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVR-EVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-TTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHH-HHcCCC
Confidence 3677777666 4567889999876532 211 12333444442 234556
Q ss_pred ceEEEeecC---H----HHHhcHHHHHHh-----CCEEEEeCCccccc--CCCCChHHHHHHHHHHH-HHcCCCeEEehh
Q 007936 327 IAVIAKIES---I----DSLKNLEEIILA-----SDGAMVARGDLGAQ--IPLEQVPSAQQKIVQLC-RQLNKPVIVASQ 391 (584)
Q Consensus 327 i~IiAKIEt---~----~av~NldeIl~~-----sDGImIaRGDLg~e--i~~e~V~~~Qk~II~~c-~~~gKPvivATq 391 (584)
..|..||-- . ..++...++++. +|.|-+.-|...-. .+.. +..+...++.. +..+.||+....
T Consensus 226 ~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Gg 303 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWG--PAFMGPIAERVRREAKLPVTSAWG 303 (363)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCCEEECSS
T ss_pred ceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCC--cchhHHHHHHHHHHcCCcEEEeCC
Confidence 778888831 1 223333333332 68888875543221 1111 11122223322 234899987532
Q ss_pred hhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 392 LLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 392 mLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
+ -|. .+...++..| +|+|++.
T Consensus 304 I---------~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 304 F---------GTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp T---------TSH---HHHHHHHHTTSCSEEECC
T ss_pred C---------CCH---HHHHHHHHCCCccEEEec
Confidence 2 122 3445678888 9999986
No 191
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=56.82 E-value=26 Score=38.30 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEeCCcccc--cCCCCChHHHHHHHHHHHHH-
Q 007936 307 SAEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVARGDLGA--QIPLEQVPSAQQKIVQLCRQ- 381 (584)
Q Consensus 307 saedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIaRGDLg~--ei~~e~V~~~Qk~II~~c~~- 381 (584)
+.++|+++|+.. +++|+.| +-+ .+......+. +|+|.|+ |--|. +..... ..+...+.+.+++
T Consensus 331 ~~~~i~~lr~~~-------~~PvivKgv~~---~e~A~~a~~aGad~I~vs-~hgG~~~d~~~~~-~~~l~~v~~~v~~~ 398 (511)
T 1kbi_A 331 TWKDIEELKKKT-------KLPIVIKGVQR---TEDVIKAAEIGVSGVVLS-NHGGRQLDFSRAP-IEVLAETMPILEQR 398 (511)
T ss_dssp CHHHHHHHHHHC-------SSCEEEEEECS---HHHHHHHHHTTCSEEEEC-CTTTTSSTTCCCH-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh-------CCcEEEEeCCC---HHHHHHHHHcCCCEEEEc-CCCCccCCCCCch-HHHHHHHHHHHHhh
Confidence 466777777654 3678888 333 2222333333 8999994 11122 222222 2334455555542
Q ss_pred ---cCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 382 ---LNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 382 ---~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
.+.|||...-+- --.|+..++..|||++|+..
T Consensus 399 ~~~~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 399 NLKDKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TCBTTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred ccCCCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 267888764322 34688999999999999864
No 192
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=56.72 E-value=1.5e+02 Score=30.07 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=77.8
Q ss_pred hhHHhHhcCCCEEEEc-CCCCH---HHHHHHHHHHHh-hcCCCCceEEEeecCHHH---------HhcHHHHHHh--CCE
Q 007936 288 DIDFGITEGVDFIAIS-FVKSA---EVINHLKSYIAA-RSRDSDIAVIAKIESIDS---------LKNLEEIILA--SDG 351 (584)
Q Consensus 288 dI~~al~~gvD~I~lS-fV~sa---edV~~lr~~l~~-~~~~~~i~IiAKIEt~~a---------v~NldeIl~~--sDG 351 (584)
.++.+++.|+|.|.+- |+.+. +.++++++..+. .. ..+++|+ |+..+ +...-.+... +|.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~--~GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~ 205 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMK--VGMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQI 205 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHT--TTCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHH--cCCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCE
Confidence 4577889999987754 44443 233333333321 22 2356654 44332 2222233323 587
Q ss_pred EEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhh-HHHHHHHHHcccceEeecCCCCCC
Q 007936 352 AMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAE-VADVSEAVRQRADALMLSGESAMG 430 (584)
Q Consensus 352 ImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAE-v~Dv~nav~~G~D~imLs~ETa~G 430 (584)
|=.. ++.+. .+++++.| ..||+++- .+..+..+ ...+..++..|++++.......--
T Consensus 206 VKt~-------~t~e~----~~~vv~~~---~vPVv~~G--------G~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 206 IKTY-------YVEKG----FERIVAGC---PVPIVIAG--------GKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp EEEE-------CCTTT----HHHHHHTC---SSCEEEEC--------CSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred EEeC-------CCHHH----HHHHHHhC---CCcEEEEE--------CCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 6654 22122 24455444 68998763 12212223 466778999999999987777777
Q ss_pred CChHHHHHHHHHHHHH
Q 007936 431 QFPDKALTVLRSVSLR 446 (584)
Q Consensus 431 ~yPveaV~~m~~I~~~ 446 (584)
..|.+.++.+..++.+
T Consensus 264 ~dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 264 DHPVAMMKAVQAVVHH 279 (295)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhC
Confidence 8999999999988765
No 193
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=56.37 E-value=1.1e+02 Score=33.55 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=71.1
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++.+- .|...-...+...-..|++.++.. ...-++.+...+++.+-.
T Consensus 93 avA~aa~~lGi~~~Iv-----------mP~~~p~~Kv~~~r~~GAeVvlv~------~~~dda~~~a~ela~e~g----- 150 (514)
T 1tdj_A 93 GVAFSSARLGVKALIV-----------MPTATADIKVDAVRGFGGEVLLHG------ANFDEAKAKAIELSQQQG----- 150 (514)
T ss_dssp HHHHHHHHTTCCEEEE-----------CCSSCCHHHHHHHHHHSCEEECCC------SSHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEEC------CCHHHHHHHHHHHHHhcC-----
Confidence 4567788999999875 232222344555566799866532 234566655544443311
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC-CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCc
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE-VDALFVYTKTGHMASLLSR----CRPDCPIFAFTST 521 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~-a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~ 521 (584)
....++.. .+ .....-..-+.++.+++. .++|||.+-+|.++.-+++ .+|.+.||++.+.
T Consensus 151 -----~~~v~pfd--np-~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~ 215 (514)
T 1tdj_A 151 -----FTWVPPFD--HP-MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAE 215 (514)
T ss_dssp -----CEECCSSC--CH-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred -----CEeeCCCC--CH-HHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 11111111 11 111222334667777774 8999999999999877665 4799999999985
No 194
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=56.32 E-value=44 Score=31.21 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=44.3
Q ss_pred eeCCCEEEEeecc--cCCC-CCCCEEEecccchhc--ccCCCCEEEEe--CC-eeEEEEEEEeCCeEEE
Q 007936 188 AEDGEIWTFTVRA--FDSP-RPERTITVNYDGFAE--DVKVGDELLVD--GG-MVRFEVIEKIGPDVKC 248 (584)
Q Consensus 188 l~~G~~v~~t~~~--~~~~-~~~~~i~v~~~~~~~--~v~vGd~I~id--DG-~i~l~V~~~~~~~i~c 248 (584)
++.|++++|+... -++. .++....++...|.. .+++|+.+.+. || .+...|+++.++.+..
T Consensus 75 m~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 75 LKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp CCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 6789999998763 2233 344556677777764 48999999996 45 4778999999987654
No 195
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=56.24 E-value=69 Score=33.13 Aligned_cols=120 Identities=15% Similarity=0.220 Sum_probs=71.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++++- .|..+....+...-..|++.+...+ .| .++.+...++..+.+.+
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~--- 166 (372)
T 1p5j_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGW--- 166 (372)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTE---
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCc---
Confidence 4567789999998875 2333333445555667998775432 23 45555544443331111
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhcc-----CCCCcEEEEcCch
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSRC-----RPDCPIFAFTSTT 522 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr~-----RP~~PIiavT~~~ 522 (584)
+...+.. .+ .....-...+.|+.++++ .++||+.+-+|.++.-++++ .|.+.||++.+..
T Consensus 167 ------~~v~~~~--n~-~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 167 ------VYIPPFD--DP-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp ------EECCSSC--CH-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred ------EEeCCCC--CH-HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 1111111 11 122333445677777774 69999999999998766642 2889999998853
No 196
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=56.17 E-value=1.2e+02 Score=29.13 Aligned_cols=118 Identities=14% Similarity=0.206 Sum_probs=73.4
Q ss_pred hhhHHhHhcCCCEEEE-----cCCC----CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI-----SFVK----SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l-----SfV~----saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaR 356 (584)
++++...+.|+|++-+ .||. .++.++++|+.. +.+.-+-+--++++++. -++...++ +|+|-+.
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH- 94 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFH- 94 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEE-
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEc-
Confidence 4556667789999999 8875 456777777764 01122334457888864 47777776 8999985
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee-cCCCCCCC
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML-SGESAMGQ 431 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL-s~ETa~G~ 431 (584)
.|-+ +. -.+.++.++++|+.++++. +|.-.-..+ ..+...+|.+++ |-+.-.|-
T Consensus 95 ----~Ea~-~~----~~~~i~~i~~~G~k~gval--------~p~t~~e~l----~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 95 ----LEAT-EN----PGALIKDIRENGMKVGLAI--------KPGTSVEYL----APWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp ----GGGC-SC----HHHHHHHHHHTTCEEEEEE--------CTTSCGGGT----GGGGGGCSEEEEESSCTTTCS
T ss_pred ----cCCc-hh----HHHHHHHHHHcCCCEEEEE--------cCCCCHHHH----HHHhccCCeEEEeeecCCCCC
Confidence 1221 12 2567888899999999984 221111112 234456888876 44554444
No 197
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=56.17 E-value=30 Score=34.69 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=57.4
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLD-LADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 4457788999999987 334455555555444432 2244688999884 35666555554444 79999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+. .|.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~~---ia~a~~lPiilY 133 (292)
T 2ojp_A 105 PYYNR-PSQEGLYQHFKA---IAEHTDLPQILY 133 (292)
T ss_dssp CCSSC-CCHHHHHHHHHH---HHTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 54421 122333333333 344557898874
No 198
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=56.05 E-value=67 Score=32.50 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=58.9
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +--|.++=.++.+...+ .. .+++||+-+ -|.++++......+. +||+|+-+
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~-~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIK-RA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHH-HC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHH-Hc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 44578889999999874 33445555555554432 23 468999988 456666666665555 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcC--CCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLN--KPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~g--KPvivA 389 (584)
-.. -.+.+.+.. ..-..|.+.+ .|+++-
T Consensus 111 P~~--~~s~~~l~~---~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 111 PPS--LRTDEQITT---YFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp CTT--CCSHHHHHH---HHHHHHHHHCTTSCEEEE
T ss_pred CCC--CCCHHHHHH---HHHHHHHhCCCCCcEEEE
Confidence 542 122233333 3333445556 898874
No 199
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=56.01 E-value=45 Score=30.58 Aligned_cols=61 Identities=26% Similarity=0.444 Sum_probs=43.6
Q ss_pred EeeCCCEEEEeecc---cCCCCCCCEEEecccchhc--ccCCCCEEEEe--CCe-eEEEEEEEeCCeEE
Q 007936 187 RAEDGEIWTFTVRA---FDSPRPERTITVNYDGFAE--DVKVGDELLVD--GGM-VRFEVIEKIGPDVK 247 (584)
Q Consensus 187 ~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~~--~v~vGd~I~id--DG~-i~l~V~~~~~~~i~ 247 (584)
-++.|+++.|+... |-...++....++...|.. .+++|+.+.+. +|. +..+|+++.++.+.
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 46799999998762 3223344456677777764 68999999997 464 46789999888765
No 200
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=55.81 E-value=54 Score=32.82 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=61.8
Q ss_pred cCHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee-----c----CHHHHhcHHHHHHhCCEEE
Q 007936 284 KDWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI-----E----SIDSLKNLEEIILASDGAM 353 (584)
Q Consensus 284 kD~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI-----E----t~~av~NldeIl~~sDGIm 353 (584)
.|.++ |+.+.+.|++.++++-+ +.++...+.++.+... +....+++-+ + +.+.++.|++.++.-..+-
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g~-~~~~~~~~~~la~~~~-~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vva 94 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTGT-SLAVSEQALELCQQLD-ASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRA 94 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHC-TTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHhCC-CCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEE
Confidence 34444 57788999999888743 5777777777764221 1112344433 1 2234555666654433444
Q ss_pred EeCCcccccCCCC-ChHHHHH----HHHHHHHHcCCCeEEehh
Q 007936 354 VARGDLGAQIPLE-QVPSAQQ----KIVQLCRQLNKPVIVASQ 391 (584)
Q Consensus 354 IaRGDLg~ei~~e-~V~~~Qk----~II~~c~~~gKPvivATq 391 (584)
| |..|.+.... .-...|+ ..++.|++.|+||++.|.
T Consensus 95 I--GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 95 V--GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp E--EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred E--EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 4 5666665432 1234454 567889999999999863
No 201
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=55.67 E-value=11 Score=36.88 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=83.0
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHH-------HHHHh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLE-------EIILA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~Nld-------eIl~~-s 349 (584)
|..|..|.+.+ +.+.+.|++.|+++ +..+..+++.++ +.++++.+-|=.+.|-.+.+ +-++. +
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~----~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GA 85 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP----HAPFRLVTVVGFPLGYQEKEVKALEAALACARGA 85 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT----TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC----CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCC
Confidence 44455555544 56778899999975 345666666662 34578888786655433333 22222 6
Q ss_pred CEEEE--eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCC
Q 007936 350 DGAMV--ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGE 426 (584)
Q Consensus 350 DGImI--aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~E 426 (584)
|.|-+ ..|.|- +=.++.+..-.+.+.+.|...+.|||+-|-. +|..|+..... +...|+|.|=-|
T Consensus 86 devd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs-- 153 (220)
T 1ub3_A 86 DEVDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS-- 153 (220)
T ss_dssp SEEEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC--
T ss_pred CEEEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 65532 112110 0011233334445555565556677776644 36677766666 778899998655
Q ss_pred CCCCCC----hHHHHHHHHHHH
Q 007936 427 SAMGQF----PDKALTVLRSVS 444 (584)
Q Consensus 427 Ta~G~y----PveaV~~m~~I~ 444 (584)
.|.. -.+.++.|++++
T Consensus 154 --TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 --TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp --CSSSSCCCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHhh
Confidence 4443 458888888764
No 202
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=55.36 E-value=45 Score=32.84 Aligned_cols=118 Identities=19% Similarity=0.226 Sum_probs=66.1
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEE--eCC-ccccc
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMV--ARG-DLGAQ 362 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImI--aRG-DLg~e 362 (584)
...++.+.+.|+|+++++-+- .+++.++.+.++. .+ +.++.-+.-....+.+.+|.+.++|.+. +.- =-|..
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~--~g--l~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~ 186 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKK--YV--LSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAR 186 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHH--TT--CEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC-----
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHH--cC--CcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCC
Confidence 345677789999999998654 4678888887743 23 3333334322344678888888765432 111 11222
Q ss_pred CCCCChH-HHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 363 IPLEQVP-SAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 363 i~~e~V~-~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
-+ .+ .-....++..+++ +.|+++.. ..=|.. ++.. +..|+|+++..
T Consensus 187 ~~---~~~~~~~~~v~~vr~~~~~pv~vG~---------GI~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 187 EK---LPYERIKKKVEEYRELCDKPVVVGF---------GVSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp -------CHHHHHHHHHHHHHCCSCEEEES---------SCCSHH---HHHH-HHTTSSEEEEC
T ss_pred CC---cCcccHHHHHHHHHhhcCCCEEEeC---------CCCCHH---HHHH-HHcCCCEEEEC
Confidence 22 11 1223445555554 78988753 233333 3344 67899999985
No 203
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=55.16 E-value=20 Score=34.16 Aligned_cols=124 Identities=12% Similarity=0.103 Sum_probs=64.9
Q ss_pred hHHhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhhcCCCCceEEE--eecCHHHHhcHHHHHHh-CCEEEEeCCccc
Q 007936 289 IDFGITEGVDFIAIS-----FVKSAEVINHLKSYIAARSRDSDIAVIA--KIESIDSLKNLEEIILA-SDGAMVARGDLG 360 (584)
Q Consensus 289 I~~al~~gvD~I~lS-----fV~saedV~~lr~~l~~~~~~~~i~IiA--KIEt~~av~NldeIl~~-sDGImIaRGDLg 360 (584)
.+...+.|+|+|-+. |...... ..++++.+ . .+++++. .|.+++ .+++.++. +|+|++++..|.
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~--~--~~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVG--K--LDVQVELSGGIRDDE---SLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHH--H--CSSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHH--h--cCCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 345678899999883 5555533 33443332 1 1356665 466655 36666666 899999877652
Q ss_pred ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhh----H-hh-hcCC---CCChhhHHHHHHHHHcccceEeecCCCCCCC
Q 007936 361 AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLL----E-SM-IEYP---TPTRAEVADVSEAVRQRADALMLSGESAMGQ 431 (584)
Q Consensus 361 ~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmL----e-SM-i~~p---~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~ 431 (584)
- |. .+.+..+..|.-++++-... + +- +..- .++. +..+..+...|+|.+++++-+.-|.
T Consensus 109 ~-------p~---~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~ 176 (244)
T 2y88_A 109 N-------PQ---WCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDL--WDVLERLDSEGCSRFVVTDITKDGT 176 (244)
T ss_dssp C-------HH---HHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEH--HHHHHHHHHTTCCCEEEEETTTTTT
T ss_pred C-------hH---HHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCH--HHHHHHHHhCCCCEEEEEecCCccc
Confidence 1 22 33333444443343331111 0 00 0000 0011 2233445667999999987666555
Q ss_pred C
Q 007936 432 F 432 (584)
Q Consensus 432 y 432 (584)
|
T Consensus 177 ~ 177 (244)
T 2y88_A 177 L 177 (244)
T ss_dssp T
T ss_pred c
Confidence 4
No 204
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=55.11 E-value=74 Score=30.78 Aligned_cols=111 Identities=13% Similarity=0.105 Sum_probs=69.6
Q ss_pred CccCHhhhHHh-HhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEE--eecCH-------HHHhcHHHHHHh-CC
Q 007936 282 SPKDWLDIDFG-ITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIA--KIESI-------DSLKNLEEIILA-SD 350 (584)
Q Consensus 282 t~kD~~dI~~a-l~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiA--KIEt~-------~av~NldeIl~~-sD 350 (584)
+..+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++.++. +|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-------~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad 103 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-------SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAA 103 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-------CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCC
Confidence 34455556554 4669998876 5889998888754 356665 32100 123446666666 89
Q ss_pred EEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 351 GAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 351 GImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
.|.+.-..+ ... ...+.+++.|+++|.++++-. .|.. +...+...|+|.+..
T Consensus 104 ~V~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~e---ea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 104 IIAVDGTAR---QRP----VAVEALLARIHHHHLLTMADC-----------SSVD---DGLACQRLGADIIGT 155 (232)
T ss_dssp EEEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEEC-----------CSHH---HHHHHHHTTCSEEEC
T ss_pred EEEECcccc---CCH----HHHHHHHHHHHHCCCEEEEeC-----------CCHH---HHHHHHhCCCCEEEE
Confidence 998763322 111 245678888999999988742 2333 345677899999953
No 205
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=54.83 E-value=1.4e+02 Score=30.39 Aligned_cols=142 Identities=14% Similarity=0.160 Sum_probs=84.3
Q ss_pred ccCHhhhHHhHhcCCCEEEEc-------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH------------HhcHH
Q 007936 283 PKDWLDIDFGITEGVDFIAIS-------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS------------LKNLE 343 (584)
Q Consensus 283 ~kD~~dI~~al~~gvD~I~lS-------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a------------v~Nld 343 (584)
-.+.+++..|.+.|+|.|=+- -.-|...++.++++. ++.|.++|.-+.| .+.++
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-------~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~ 118 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-------QIPVFVMIRPRGGDFLYSDREIEVMKADIR 118 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-------CSCEEEECCSSSSCSCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-------CCCeEEEEecCCCCcccCHHHHHHHHHHHH
Confidence 356788899999999998764 122567777776533 4899999987766 34566
Q ss_pred HHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEe
Q 007936 344 EIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALM 422 (584)
Q Consensus 344 eIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~im 422 (584)
...++ +|||.+|- |..+-. -++. .-++++..|. +.++-+.- -++- .++..+ -+-..+..|+|-|+
T Consensus 119 ~~~~~GAdGvVfG~--L~~dg~-iD~~-~~~~Li~~a~--~l~vTFHR-AFD~-----~~d~~~--Ale~Li~lGvdrIL 184 (287)
T 3iwp_A 119 LAKLYGADGLVFGA--LTEDGH-IDKE-LCMSLMAICR--PLPVTFHR-AFDM-----VHDPMA--ALETLLTLGFERVL 184 (287)
T ss_dssp HHHHTTCSEEEECC--BCTTSC-BCHH-HHHHHHHHHT--TSCEEECG-GGGG-----CSCHHH--HHHHHHHHTCSEEE
T ss_pred HHHHcCCCEEEEee--eCCCCC-cCHH-HHHHHHHHcC--CCcEEEEC-chhc-----cCCHHH--HHHHHHHcCCCEEE
Confidence 66666 89999973 211111 1222 3345666554 45666541 1121 122222 12233334999999
Q ss_pred ecCCCCCCCChHHHHHHHHHHHHHHh
Q 007936 423 LSGESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 423 Ls~ETa~G~yPveaV~~m~~I~~~aE 448 (584)
.||--.. ..+-+..|++++..+.
T Consensus 185 TSG~~~~---a~~Gl~~Lk~Lv~~a~ 207 (287)
T 3iwp_A 185 TSGCDSS---ALEGLPLIKRLIEQAK 207 (287)
T ss_dssp ECTTSSS---TTTTHHHHHHHHHHHT
T ss_pred CCCCCCC---hHHhHHHHHHHHHHhC
Confidence 9985322 2567777777766554
No 206
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=54.66 E-value=15 Score=39.77 Aligned_cols=51 Identities=12% Similarity=0.242 Sum_probs=41.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
+..+.+.+|......+.++.++++|+++.=||++||..+...++++.+|+.
T Consensus 243 rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 243 QLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 344566677666678999999999999999999999987777777777764
No 207
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=53.92 E-value=37 Score=33.44 Aligned_cols=118 Identities=17% Similarity=0.112 Sum_probs=67.2
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEE-E-eCCcc-ccc
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAM-V-ARGDL-GAQ 362 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGIm-I-aRGDL-g~e 362 (584)
.+.++.+.+.|+|+|+++-.-. +++.++.+.++. .+ +..+.-+.-....+.+++|++.++|.+ + ..-.. |..
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~--~g--~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~ 186 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALR--HN--IAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAE 186 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHH--TT--CEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSS
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHH--cC--CcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCc
Confidence 4566778899999999987664 567788888843 23 333333322234457888888887433 2 11111 111
Q ss_pred CCC-CChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 363 IPL-EQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 363 i~~-e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
-+. +.+.. .++..++. +.|+++..- .=|. .++..++..|+|+++..
T Consensus 187 ~~~~~~~~~----~i~~lr~~~~~pi~vggG---------I~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 187 NRGALPLHH----LIEKLKEYHAAPALQGFG---------ISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp SCC--CCHH----HHHHHHHTTCCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred cCCCchHHH----HHHHHHhccCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 121 12222 22333333 789887532 2222 34567788999999975
No 208
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=53.92 E-value=64 Score=31.24 Aligned_cols=110 Identities=11% Similarity=0.109 Sum_probs=69.2
Q ss_pred CccCHhhhHHh-HhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecC-H--------HHHhcHHHHHHh-CC
Q 007936 282 SPKDWLDIDFG-ITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIES-I--------DSLKNLEEIILA-SD 350 (584)
Q Consensus 282 t~kD~~dI~~a-l~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt-~--------~av~NldeIl~~-sD 350 (584)
++.+...+..+ .+.|+.+|-+ .+.++++++|+.. +++|+..+=. . .-++.+++.++. +|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-------~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad 103 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-------SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD 103 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-------CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC
Confidence 34455555554 4669999886 5889998888755 3566643210 0 123446666666 89
Q ss_pred EEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEe
Q 007936 351 GAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALM 422 (584)
Q Consensus 351 GImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~im 422 (584)
.|.+.-..+ ... ...+.+++.|++.|.+++.-. .|..| ...+...|+|.+-
T Consensus 104 ~I~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig 154 (229)
T 3q58_A 104 IIAFDASFR---SRP----VDIDSLLTRIRLHGLLAMADC-----------STVNE---GISCHQKGIEFIG 154 (229)
T ss_dssp EEEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEE
T ss_pred EEEECcccc---CCh----HHHHHHHHHHHHCCCEEEEec-----------CCHHH---HHHHHhCCCCEEE
Confidence 988753321 111 234678888899999988742 33333 3567789999995
No 209
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=53.89 E-value=28 Score=32.85 Aligned_cols=84 Identities=15% Similarity=0.084 Sum_probs=49.5
Q ss_pred HhhhHHhHhcCCCEEEEcCCC--------CHHHHHHHHHHHHhhcCCCCceEEE--eecCHHHHhcHHHHHHh-CCEEEE
Q 007936 286 WLDIDFGITEGVDFIAISFVK--------SAEVINHLKSYIAARSRDSDIAVIA--KIESIDSLKNLEEIILA-SDGAMV 354 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~--------saedV~~lr~~l~~~~~~~~i~IiA--KIEt~~av~NldeIl~~-sDGImI 354 (584)
.+.++.+.+.|+|+|.+.-+. +.+.++++++.. ++.|++ -|.+ .+|+.+.++. +||+++
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~-------~~pvia~GGi~~---~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV-------RIPVIASGGAGR---VEHFYEAAAAGADAVLA 226 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC-------SSCEEEESCCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc-------CCCEEEeCCCCC---HHHHHHHHHcCCcHHHH
Confidence 344677788999999875443 234455544432 345554 3433 2566666665 899999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCe
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPV 386 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPv 386 (584)
|++=+....+ .+++.+.++++|.++
T Consensus 227 gsal~~~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 227 ASLFHFRVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp SHHHHTTSSC-------HHHHHHHHHHTTCBC
T ss_pred HHHHHcCCCC-------HHHHHHHHHHcCCCC
Confidence 9864443333 234555566777654
No 210
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=53.84 E-value=19 Score=38.95 Aligned_cols=51 Identities=20% Similarity=0.326 Sum_probs=42.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
+..+-+.+|....+.+.++.|+++|+++.=||.+||..+...++++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 455666778776779999999999999999999999988777777777753
No 211
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=53.82 E-value=89 Score=31.74 Aligned_cols=143 Identities=11% Similarity=0.098 Sum_probs=84.7
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHH----H---HHHh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLE----E---IILA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~Nld----e---Il~~-s 349 (584)
|..|..|.+.+ +.+.+.|+..|+++ +..|..+++.++ +..++|.+=|=-+.|-...+ | -++. +
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~----~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 140 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ----GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGA 140 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT----TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC----CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 45566666554 66788999999996 667888888883 34577777675444433322 2 2222 5
Q ss_pred CEEEEeCCcccccCCC---CChHHHHHHHHHHHHHcCCC---eEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEe
Q 007936 350 DGAMVARGDLGAQIPL---EQVPSAQQKIVQLCRQLNKP---VIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALM 422 (584)
Q Consensus 350 DGImIaRGDLg~ei~~---e~V~~~Qk~II~~c~~~gKP---vivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~im 422 (584)
|.|=+ -+.++. .+...+.+.|-..+...+.| ||+-|-. .|..|+..... +...|+|.|=
T Consensus 141 dEIDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVK 206 (288)
T 3oa3_A 141 SELDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVK 206 (288)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEE
Confidence 54421 122222 34455555555444444444 4444433 46777766555 7788999987
Q ss_pred ecCCCCC--CCChHHHHHHHHHHHH
Q 007936 423 LSGESAM--GQFPDKALTVLRSVSL 445 (584)
Q Consensus 423 Ls~ETa~--G~yPveaV~~m~~I~~ 445 (584)
-| |-. |.--++.|+.|+++++
T Consensus 207 TS--TGf~~~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 207 TS--TGFNGPGASIENVSLMSAVCD 229 (288)
T ss_dssp CC--CSSSSCCCCHHHHHHHHHHHH
T ss_pred cC--CCCCCCCCCHHHHHHHHHHHH
Confidence 66 322 2344678999998874
No 212
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=53.77 E-value=19 Score=39.41 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=44.3
Q ss_pred HhhhHHhHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEE
Q 007936 286 WLDIDFGITEGVDFIAISFV---------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGA 352 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV---------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGI 352 (584)
.++.+.+.+.|+|+|.+|.- .+.+-+.++++.+.......++.||+- -||.+-.+++++ +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 57788899999999999631 123445566666632223346888872 455555555554 8999
Q ss_pred EEeC
Q 007936 353 MVAR 356 (584)
Q Consensus 353 mIaR 356 (584)
||||
T Consensus 430 ~iGr 433 (511)
T 1kbi_A 430 GLGR 433 (511)
T ss_dssp EECH
T ss_pred EECH
Confidence 9998
No 213
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=53.70 E-value=51 Score=29.85 Aligned_cols=63 Identities=13% Similarity=0.135 Sum_probs=44.2
Q ss_pred EeeCCCEEEEeecc---cCCCCCCCEEEecccchh-cccCCCCEEEEe--CCe-eEEEEEEEeCCeEEEE
Q 007936 187 RAEDGEIWTFTVRA---FDSPRPERTITVNYDGFA-EDVKVGDELLVD--GGM-VRFEVIEKIGPDVKCR 249 (584)
Q Consensus 187 ~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~-~~v~vGd~I~id--DG~-i~l~V~~~~~~~i~c~ 249 (584)
-++.|+++.|+... |-...++....++...|- ..+++|+.+.+. ||. +...|+++.++.+..-
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD 125 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVD 125 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEE
Confidence 36789999998762 322334445567777773 368999999997 565 6778999988877643
No 214
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=53.61 E-value=1.4e+02 Score=27.73 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=63.4
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCH---------HHHhcHHHHHHh-CCEEEEeCCcc
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESI---------DSLKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~---------~av~NldeIl~~-sDGImIaRGDL 359 (584)
+...+.|+++|-+ .+.+.++++++.. +..++..+.+. .-.+.+++.++. +|.|.++-.++
T Consensus 30 ~~~~~~Ga~~i~~---~~~~~i~~i~~~~-------~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~ 99 (223)
T 1y0e_A 30 LAAYEGGAVGIRA---NTKEDILAIKETV-------DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ 99 (223)
T ss_dssp HHHHHHTCSEEEE---ESHHHHHHHHHHC-------CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS
T ss_pred HHHHHCCCeeecc---CCHHHHHHHHHhc-------CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc
Confidence 4456889999865 5788888888765 23443221110 012345555555 89998875432
Q ss_pred cccCCCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 360 GAQIPLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 360 g~ei~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
. -|.+.+ ..+++.+++. |+++++-. -|..| ...+...|+|.++++
T Consensus 100 ~--~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 100 Q--RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp C--CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred c--CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 1 111222 4678888888 88887532 23333 455788999999875
No 215
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=53.51 E-value=23 Score=34.73 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=36.8
Q ss_pred CCCHHHHHHHH-HhcCCEEEEeCCCC---------CHHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 117 TCGFEQLEALA-VGGMNVARINMCHG---------TREWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 117 ~~~~e~l~~li-~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
..+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+-+
T Consensus 38 ~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G--i~vild~h~ 101 (293)
T 1tvn_A 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED--MYVIIDFHS 101 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 34688999999 49999999988652 23445555555555556666 556778753
No 216
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=53.22 E-value=1.2e+02 Score=28.92 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=77.3
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHH-------HHHh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEE-------IILA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~Nlde-------Il~~-s 349 (584)
|..|+.|.+.+ +.+.+.|++.++++ ++-+...++.+ . .+++.+-++.+.|....+. .++. +
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l--~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Ga 84 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIA--K----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGA 84 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHC--S----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHh--c----CCceeeEecCCCCccchhhhHHHHHHHHHcCC
Confidence 45566666555 34567899998854 34466666655 1 4788888887776654432 2222 5
Q ss_pred CEEE--EeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCC
Q 007936 350 DGAM--VARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGE 426 (584)
Q Consensus 350 DGIm--IaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~E 426 (584)
|+|= +.-|-+. -.+...+.+. ++..++...|+++-. ++| .+.-|..|+.+++. +...|+|++..+.-
T Consensus 85 d~Id~viN~g~~~----~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e----~~~l~~~~~~~~a~~a~eaGad~I~tstg 154 (225)
T 1mzh_A 85 QELDIVWNLSAFK----SEKYDFVVEE-LKEIFRETPSAVHKV-IVE----TPYLNEEEIKKAVEICIEAGADFIKTSTG 154 (225)
T ss_dssp SEEEEECCHHHHH----TTCHHHHHHH-HHHHHHTCTTSEEEE-ECC----GGGCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred CEEEEEecHHHHh----cCChHHHHHH-HHHHHHHhcCceEEE-EEe----CCCCCHHHHHHHHHHHHHhCCCEEEECCC
Confidence 6664 2111110 0122333333 666666544877532 222 23346667767666 45679999944421
Q ss_pred CCCCCChHHHHHHHHH
Q 007936 427 SAMGQFPDKALTVLRS 442 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~ 442 (584)
-..|.+-.+.++.|++
T Consensus 155 ~~~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 155 FAPRGTTLEEVRLIKS 170 (225)
T ss_dssp CSSSCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH
Confidence 1123344566655543
No 217
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=52.69 E-value=42 Score=34.16 Aligned_cols=126 Identities=11% Similarity=0.068 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 007936 371 AQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKW 450 (584)
Q Consensus 371 ~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~ 450 (584)
.=.-+...|+..|.|+.+- .|..+....+...-..|++.+...++. .| .++++...++..+-+.+
T Consensus 83 ~g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~ 147 (334)
T 3tbh_A 83 TGVSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNA 147 (334)
T ss_dssp HHHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCE
Confidence 3345677899999998875 233333344556667899988776442 12 34444433333221111
Q ss_pred hhhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc--CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 451 WREEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL--EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l--~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
+...+.. .+..+.......+.|+.+++ ..++||+.+-+|.+..-+++ ..|.+.|+++.+..
T Consensus 148 ---------~~i~~~~--np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 148 ---------VLADQFA--TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp ---------EECCTTT--CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred ---------EECCccC--ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 1111111 11111112234566777776 47999999999998866654 47999999997654
No 218
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=52.67 E-value=1.1e+02 Score=28.34 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=63.7
Q ss_pred HhhhHHhHhcCCCEEE-----EcCCCC----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 286 WLDIDFGITEGVDFIA-----ISFVKS----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~-----lSfV~s----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIa 355 (584)
.++++.+.+.|+|++- -+|++. .+.++++++.+ +..+.+--++...+ +.++...++ +|++.+.
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~-----~~~~~v~l~v~d~~--~~i~~~~~~gad~v~vh 91 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS-----KLVFDCHLMVVDPE--RYVEAFAQAGADIMTIH 91 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-----CSEEEEEEESSSGG--GGHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC-----CCCEEEEEeecCHH--HHHHHHHHcCCCEEEEc
Confidence 3456777889999842 255666 66666666533 33455667777653 235555555 8999885
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEee
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALML 423 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imL 423 (584)
-+. + +.. ...++.+++.|+.++++. +| .|..|. ..++..++|.+++
T Consensus 92 ~~~-----~-~~~----~~~~~~~~~~g~~i~~~~--------~~-~t~~e~---~~~~~~~~d~vl~ 137 (220)
T 2fli_A 92 TES-----T-RHI----HGALQKIKAAGMKAGVVI--------NP-GTPATA---LEPLLDLVDQVLI 137 (220)
T ss_dssp GGG-----C-SCH----HHHHHHHHHTTSEEEEEE--------CT-TSCGGG---GGGGTTTCSEEEE
T ss_pred cCc-----c-ccH----HHHHHHHHHcCCcEEEEE--------cC-CCCHHH---HHHHHhhCCEEEE
Confidence 221 1 222 355666777898888873 11 122221 2344577898865
No 219
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=52.63 E-value=55 Score=35.39 Aligned_cols=128 Identities=20% Similarity=0.198 Sum_probs=76.3
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|+..|.++++- .|..+....+...-..|++.+...++... ..+..+++...+++.+....
T Consensus 126 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~-- 191 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNS-- 191 (527)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSE--
T ss_pred HHHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCc--
Confidence 34566889999998875 24443344555666789998877654221 11233444444443322111
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhcc----CCCCcEEEEcCchh
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSRC----RPDCPIFAFTSTTS 523 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr~----RP~~PIiavT~~~~ 523 (584)
+...++. .+.++.......+.++.++++ .++||+.+-+|.++.-++++ .|.+.|+++.+...
T Consensus 192 -------~~~~~~~--n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 192 -------IVLDQYR--NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp -------ECCCTTT--CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred -------EecCCCC--CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 1112211 111122233445667777774 79999999999998776654 79999999988654
No 220
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=52.18 E-value=17 Score=31.04 Aligned_cols=40 Identities=18% Similarity=0.409 Sum_probs=31.4
Q ss_pred HHHHHHHHhhcCCcEEEEccCC---------chHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAKMANNLEVDALFVYTKT---------GHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~s---------G~tA~~lSr~RP~~PIiav 518 (584)
+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.|
T Consensus 99 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 99 SRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 4445677888999999998763 788888888776 999864
No 221
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=52.17 E-value=78 Score=30.97 Aligned_cols=69 Identities=9% Similarity=0.123 Sum_probs=47.3
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIa 355 (584)
..+.++.+...|+|+|++-.=..+.+-.+++.++..... ....++..|=..+.- .|..++.. .||||+.
T Consensus 29 ~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~-~~~~~~VRv~~~~~~-~i~~~l~~g~~gI~~P 98 (256)
T 1dxe_A 29 NPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKG-SASAPVVRVPTNEPV-IIKRLLDIGFYNFLIP 98 (256)
T ss_dssp SHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTT-CSSEEEEECSSSCHH-HHHHHHHTTCCEEEES
T ss_pred CHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEECCCCCHH-HHHHHHhcCCceeeec
Confidence 466778888999999999876667777777777753322 345688888433222 26666666 7899873
No 222
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=52.06 E-value=21 Score=37.59 Aligned_cols=62 Identities=15% Similarity=0.260 Sum_probs=42.8
Q ss_pred HhhhHHhHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEE
Q 007936 286 WLDIDFGITEGVDFIAISFV---------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGA 352 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV---------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGI 352 (584)
.++.+.+.+.|+|+|.+|.- -+.+-+.++++.+ +.++.||+- -|+.+-++++++ +|++
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av-----~~~ipVia~----GGI~~g~Dv~kalalGAd~V 333 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV-----EGKVEVFLD----GGVRKGTDVLKALALGAKAV 333 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH-----TTSSEEEEC----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc-----CCCCEEEEE----CCCCCHHHHHHHHHhCCCee
Confidence 67788999999999999632 2334455555544 235777772 566666666665 8999
Q ss_pred EEeC
Q 007936 353 MVAR 356 (584)
Q Consensus 353 mIaR 356 (584)
||||
T Consensus 334 ~iGr 337 (392)
T 2nzl_A 334 FVGR 337 (392)
T ss_dssp EECH
T ss_pred EECH
Confidence 9998
No 223
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=51.83 E-value=44 Score=34.73 Aligned_cols=139 Identities=13% Similarity=0.105 Sum_probs=75.9
Q ss_pred hcCCCEEEEcCC-----------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH------hCCEEEEe-
Q 007936 294 TEGVDFIAISFV-----------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL------ASDGAMVA- 355 (584)
Q Consensus 294 ~~gvD~I~lSfV-----------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~------~sDGImIa- 355 (584)
+.|+|+|-+.+= ++++.+.++.+.++.. .++.|+.||=---...++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~---~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~N 229 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV---YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCIN 229 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH---CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh---hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEec
Confidence 357899876543 4567777776666432 24789999943222333444443 26777641
Q ss_pred ---CC---cc---------cccCC-C--CCh-HHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH
Q 007936 356 ---RG---DL---------GAQIP-L--EQV-PSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVR 415 (584)
Q Consensus 356 ---RG---DL---------g~ei~-~--e~V-~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~ 415 (584)
+| |+ ....+ + ..+ +...+.+-+..++. ..|+|...- .-| ..|+..++.
T Consensus 230 T~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GG---------I~s---~~da~~~l~ 297 (354)
T 4ef8_A 230 SIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGG---------VYT---GEDAFLHVL 297 (354)
T ss_dssp CEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESC---------CCS---HHHHHHHHH
T ss_pred ccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECC---------cCC---HHHHHHHHH
Confidence 11 10 00000 0 122 33444444444443 478886533 222 357788888
Q ss_pred cccceEeecCCCCC-CCChHHHHHHHHHHHHHHhhhhhh
Q 007936 416 QRADALMLSGESAM-GQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 416 ~G~D~imLs~ETa~-G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
.|+|+||+..---. | | .++.+|....+.|+..
T Consensus 298 aGAd~V~vgra~l~~G--P----~~~~~i~~~l~~~m~~ 330 (354)
T 4ef8_A 298 AGASMVQVGTALQEEG--P----SIFERLTSELLGVMAK 330 (354)
T ss_dssp HTEEEEEECHHHHHHC--T----THHHHHHHHHHHHHHH
T ss_pred cCCCEEEEhHHHHHhC--H----HHHHHHHHHHHHHHHH
Confidence 99999999632111 2 2 3566777777776543
No 224
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=51.75 E-value=47 Score=33.69 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=57.6
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec--CHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE--SIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE--t~~av~NldeIl~~-sDGImIaRG 357 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~-~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P 115 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTE-LVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQP 115 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHH-HhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34467889999998863 34455555555444432 2345689999885 45555555544444 899999655
Q ss_pred cccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 358 DLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 358 DLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 116 ~y~~-~s~~~l~~~f~---~va~a~~lPiilY 143 (314)
T 3d0c_A 116 VHPY-ITDAGAVEYYR---NIIEALDAPSIIY 143 (314)
T ss_dssp CCSC-CCHHHHHHHHH---HHHHHSSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhCCCCEEEE
Confidence 4321 12233333333 4455668999884
No 225
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=51.75 E-value=52 Score=33.48 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred hhhHHhHhcCCCEEEEcC------CCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAISF------VKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSf------V~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++.= .-|.++=.++.+...+ ..+.++.||+-+ -|.++++.....-+. +||+|+-+
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARK-AVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHH-HHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 345688899999988742 2344444444444422 224568899988 456666666665555 89999975
Q ss_pred Ccc-cccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDL-GAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDL-g~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+ .-....+.+...-+. .|.+.+.|+++-
T Consensus 115 P~y~~kp~~~~~l~~~f~~---ia~a~~lPiilY 145 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDD---VSCQSPLPVVIY 145 (318)
T ss_dssp CCC---CCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CcccCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 532 111122333333344 445568999974
No 226
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=51.32 E-value=32 Score=35.11 Aligned_cols=58 Identities=9% Similarity=0.216 Sum_probs=37.1
Q ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCCCCH----------HHHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 114 GPATCGFEQLEALAVGGMNVARINMCHGTR----------EWHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 114 GPa~~~~e~l~~li~~Gm~v~RiN~sHg~~----------e~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
|+.-.+.+.++.|.+.|+|++||-++.... +...+.++.+=+...+. -+.+++|+-.-
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~--Gi~vildlH~~ 106 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDN--DMYVIINLHHE 106 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTT--TCEEEECCCSC
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHC--CCEEEEecCCc
Confidence 333446899999999999999999875421 22233333333333343 47888898643
No 227
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=50.81 E-value=1e+02 Score=31.67 Aligned_cols=121 Identities=12% Similarity=0.157 Sum_probs=63.1
Q ss_pred hhhHHhHhcCCCEEEEcC----------------CCCHHHHHHHHHHHHhhcCCCCceEEEeecC-------H-HHHhcH
Q 007936 287 LDIDFGITEGVDFIAISF----------------VKSAEVINHLKSYIAARSRDSDIAVIAKIES-------I-DSLKNL 342 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSf----------------V~saedV~~lr~~l~~~~~~~~i~IiAKIEt-------~-~av~Nl 342 (584)
+..+.+.+.|+|+|-+.+ .++++.+.++.+.+... . ++.|..||-. . +.++-.
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v--~~PV~vKiR~g~~~~~~~~~~~~~a 150 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-V--RVPVTVKMRLGLEGKETYRGLAQSV 150 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-C--SSCEEEEEESCBTTCCCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-h--CCceEEEEecCcCccccHHHHHHHH
Confidence 334566678999988765 34556666666666422 2 4788898831 1 122222
Q ss_pred HHHHHh-CCEEEEeCCcc--cccCCCC--ChHHHHHHHHHHH-HHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH
Q 007936 343 EEIILA-SDGAMVARGDL--GAQIPLE--QVPSAQQKIVQLC-RQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVR 415 (584)
Q Consensus 343 deIl~~-sDGImIaRGDL--g~ei~~e--~V~~~Qk~II~~c-~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~ 415 (584)
..+.+. +|+|.|--+.- +.. |.. ..+...-..+... +.. +.|||... ..-|.. |+..++.
T Consensus 151 ~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianG---------gI~s~e---da~~~l~ 217 (350)
T 3b0p_A 151 EAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNG---------GIRSLE---EALFHLK 217 (350)
T ss_dssp HHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEES---------SCCSHH---HHHHHHT
T ss_pred HHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEEC---------CcCCHH---HHHHHHh
Confidence 233333 79998864321 111 100 0000111233333 344 78998763 333444 4444555
Q ss_pred cccceEeec
Q 007936 416 QRADALMLS 424 (584)
Q Consensus 416 ~G~D~imLs 424 (584)
|+|+||+.
T Consensus 218 -GaD~V~iG 225 (350)
T 3b0p_A 218 -RVDGVMLG 225 (350)
T ss_dssp -TSSEEEEC
T ss_pred -CCCEEEEC
Confidence 99999996
No 228
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=50.81 E-value=1.3e+02 Score=28.83 Aligned_cols=138 Identities=8% Similarity=0.019 Sum_probs=77.3
Q ss_pred hHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHH-hCCEEEEeCCcccccCCCCChHH
Q 007936 292 GITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIIL-ASDGAMVARGDLGAQIPLEQVPS 370 (584)
Q Consensus 292 al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~-~sDGImIaRGDLg~ei~~e~V~~ 370 (584)
+.+.|+|++.+-..-..+.++++++.++..+......-+..+-+. ..+.+.++++ -.|-+.+.++-++-.-|.--=+.
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 578999999998777777899999888533211122334444422 3455667766 35666666665533222210011
Q ss_pred HHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHH
Q 007936 371 AQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 371 ~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~ 444 (584)
--+.+-+.| ..+.++.+.-- -+|. ++..++..|+|.+....--.....|.++++.+++..
T Consensus 157 e~~~ir~~~-~~~~~i~v~gG--------I~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~ 216 (221)
T 3exr_A 157 DLNKVKKLI-EMGFRVSVTGG--------LSVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEI 216 (221)
T ss_dssp HHHHHHHHH-HHTCEEEEESS--------CCGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhh-cCCceEEEECC--------CCHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHH
Confidence 111222223 33455554321 1232 234577899999998754344567999887776554
No 229
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=50.62 E-value=75 Score=31.59 Aligned_cols=119 Identities=10% Similarity=0.030 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|+..|.++.+- .|.......+...-..|++.+...+. | .++.+...++..+- .
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~---- 136 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-G---- 136 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-C----
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-C----
Confidence 4667889999999875 23222223445556679987654432 3 34555444443321 1
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc-----CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNL-----EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l-----~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
.+...+.. .+ .........+.|+.+++ +.+.||+.+-+|.++.-+++ ..|.+.|+++.+..
T Consensus 137 -----~~~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 137 -----YALIHPFD--DP-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp -----CEECCSSS--SH-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -----cEecCCCC--Cc-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 11111111 11 11223344445666555 47999999999999877664 46999999999864
No 230
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=50.61 E-value=8.7 Score=36.90 Aligned_cols=126 Identities=21% Similarity=0.320 Sum_probs=75.8
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHH----Hh--CCEEEEeCC
Q 007936 284 KDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII----LA--SDGAMVARG 357 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl----~~--sDGImIaRG 357 (584)
+|.++++.+++..+++|++.+. +-..+.++.+.++ +.++ .++.-++..+|+.+=++=+ .. .|||+=.+.
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk--~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~ 91 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQ--AGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRG 91 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHH--HTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCH
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHH--HcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcH
Confidence 7889999999999999999986 5567777777774 3333 4444666666665422211 11 567664443
Q ss_pred cc---cccCCC-----------------------------CChHHHHHHHHH-HHHHcCCCeEEehhhhHhhhcCCCCCh
Q 007936 358 DL---GAQIPL-----------------------------EQVPSAQQKIVQ-LCRQLNKPVIVASQLLESMIEYPTPTR 404 (584)
Q Consensus 358 DL---g~ei~~-----------------------------e~V~~~Qk~II~-~c~~~gKPvivATqmLeSMi~~p~PTr 404 (584)
-+ +-+.++ |-+|.+.-++|+ .++..+.|+|.. -+. -
T Consensus 92 ~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIaG-GlI--------~-- 160 (192)
T 3kts_A 92 NAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAG-GLI--------E-- 160 (192)
T ss_dssp HHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEEE-SSC--------C--
T ss_pred HHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEEE-CCc--------C--
Confidence 11 011111 111111123333 455668998864 222 2
Q ss_pred hhHHHHHHHHHcccceEeecCC
Q 007936 405 AEVADVSEAVRQRADALMLSGE 426 (584)
Q Consensus 405 AEv~Dv~nav~~G~D~imLs~E 426 (584)
...||.+|+..|||++.-|..
T Consensus 161 -~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 161 -TSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp -SHHHHHHHHTTTEEEEEECCG
T ss_pred -CHHHHHHHHHcCCeEEEeCCH
Confidence 456889999999999998754
No 231
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=50.42 E-value=41 Score=34.21 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=59.4
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +.-|.++=.++.+...+ ..+.++.||+-+= |.++++.....-+. +|++|+-+
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~-~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLK-TVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 34467889999998863 23344554554444432 2244688998884 56677666666655 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+...-+ ..|.+.+.|+++-
T Consensus 128 P~y~~-~s~~~l~~~f~---~va~a~~lPiilY 156 (315)
T 3na8_A 128 ISYWK-LNEAEVFQHYR---AVGEAIGVPVMLY 156 (315)
T ss_dssp CCSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhCCCcEEEE
Confidence 54422 12233433333 4445568999874
No 232
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=50.39 E-value=44 Score=33.20 Aligned_cols=125 Identities=13% Similarity=0.078 Sum_probs=67.9
Q ss_pred HhhhHHhHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CC
Q 007936 286 WLDIDFGITEGVDFIAIS--------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SD 350 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lS--------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sD 350 (584)
.+.++...+.|+++|-+. .-++.+.++++++. .+++++.++-... .+.++...+. +|
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-------~~~Pvi~~~~~~~-~~~~~~~~~aGad 102 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-------VSIPVMAKVRIGH-FVEAMILEAIGVD 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-------CSSCEEEEEETTC-HHHHHHHHHTTCS
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-------cCCCeEEEeccCC-HHHHHHHHHCCCC
Confidence 455667788999999762 12234444444322 2356665542211 3455555555 89
Q ss_pred EEEEeCCcccccCCCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCC
Q 007936 351 GAMVARGDLGAQIPLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESA 428 (584)
Q Consensus 351 GImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa 428 (584)
+| |.......++ +++.+++. +.++.+-+ -+..| ...+...|+|.+...||..
T Consensus 103 ~v-----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v-----------~~~~~---~~~a~~~Gad~I~v~G~~~ 156 (297)
T 2zbt_A 103 FI-----DESEVLTPAD-------EEHHIDKWKFKVPFVCGA-----------RNLGE---ALRRIAEGAAMIRTKGEAG 156 (297)
T ss_dssp EE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHTTCSEEEECCCSS
T ss_pred EE-----eeeCCCChHH-------HHHHHHHhCCCceEEeec-----------CCHHH---HHHHHHcCCCEEEEccccc
Confidence 99 3222222222 22223332 66666321 12222 3456889999999999988
Q ss_pred CCCChHHHHHHHHHHHH
Q 007936 429 MGQFPDKALTVLRSVSL 445 (584)
Q Consensus 429 ~G~yPveaV~~m~~I~~ 445 (584)
.| -..++..-++++..
T Consensus 157 ~g-~~~e~~~~~~~~~~ 172 (297)
T 2zbt_A 157 TG-NVVEAVRHARTMWK 172 (297)
T ss_dssp SC-CTHHHHHHHHHHHH
T ss_pred Cc-chHHHHhhHHHHHH
Confidence 88 55666666555443
No 233
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=49.81 E-value=80 Score=31.66 Aligned_cols=120 Identities=19% Similarity=0.257 Sum_probs=71.6
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|+..|.++.+- .|.......+...-..|++.+...+. | .++.+...++..+-.
T Consensus 87 ~alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~---- 145 (323)
T 1v71_A 87 QAIALSAKILGIPAKII-----------MPLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG---- 145 (323)
T ss_dssp HHHHHHHHHTTCCEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHcCCCEEEE-----------CCCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC----
Confidence 34667899999998875 12222223455566779998766543 2 234444444432211
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc-CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL-EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l-~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
.+..++.. .+ .........+.|+.+++ +.++||+.+-+|.|+.-+++ +.|.+.|+++.+..
T Consensus 146 ------~~~i~~~~--n~-~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 146 ------LTIIPPYD--HP-HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp ------CBCCCSSS--SH-HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred ------CEecCCCC--Cc-chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 11112211 11 11223344466777766 47999999999999877665 46999999999864
No 234
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=49.79 E-value=31 Score=34.57 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=57.3
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++=.++.+...+ ..+.+++||+-+= |.++++.....-+. +||+|+.+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~-~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVID-KVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHH-HHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4456778999999987 344555555555554432 2244688999884 47777666666555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+ ..|.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 133 (291)
T 3a5f_A 105 PYYNK-TTQKGLVKHFK---AVSDAVSTPIIIY 133 (291)
T ss_dssp CCSSC-CCHHHHHHHC----CTGGGCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 54321 11122222222 2344557888763
No 235
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=49.78 E-value=32 Score=37.11 Aligned_cols=54 Identities=7% Similarity=0.169 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHhcCCEEEEeCCCCC----------HHHHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 118 CGFEQLEALAVGGMNVARINMCHGT----------REWHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 118 ~~~e~l~~li~~Gm~v~RiN~sHg~----------~e~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
.+.+.|+.|.+.|+|++||-+++.. .+...+.++.+=+...+ +-+.+++|+-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~--~Gi~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFD--NDMYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHT--TTCEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHH--CCCEEEEecCCC
Confidence 3589999999999999999887432 12222333333233333 348889999644
No 236
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=49.77 E-value=64 Score=31.18 Aligned_cols=120 Identities=16% Similarity=0.100 Sum_probs=67.0
Q ss_pred HhhhHHhHhcCCCEEEEcCCC----------CHHHHHHHHHHHHhhcCCCCceEEEe---------ecC------HHHHh
Q 007936 286 WLDIDFGITEGVDFIAISFVK----------SAEVINHLKSYIAARSRDSDIAVIAK---------IES------IDSLK 340 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~----------saedV~~lr~~l~~~~~~~~i~IiAK---------IEt------~~av~ 340 (584)
.+.++++.+.|+|+|=+.+-. +.+++.++++.++.. | +.+.+- +-+ .++++
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g--l~i~~~~~~~~~~~~l~~~d~~~r~~~~~ 108 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET--G--VRVPSMCLSAHRRFPLGSEDDAVRAQGLE 108 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH--C--CEEEEEEEGGGGTSCTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHc--C--CeEEEEecCcccCCCCCCCCHHHHHHHHH
Confidence 345677889999999987654 467889999999643 2 333321 111 12345
Q ss_pred cHHHHHHh-----CCEEEEeCCcccccCCC----CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH
Q 007936 341 NLEEIILA-----SDGAMVARGDLGAQIPL----EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS 411 (584)
Q Consensus 341 NldeIl~~-----sDGImIaRGDLg~ei~~----e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~ 411 (584)
.+...++. ++.|.+..++-..+.+. +.+...-+++...|.+.|..+.+ |.+-.+...|..+..++.
T Consensus 109 ~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~ 183 (295)
T 3cqj_A 109 IMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYA 183 (295)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHH
Confidence 55555544 56666653332111111 23444456667777777876554 333233345666666666
Q ss_pred HHH
Q 007936 412 EAV 414 (584)
Q Consensus 412 nav 414 (584)
..+
T Consensus 184 ~~v 186 (295)
T 3cqj_A 184 HYL 186 (295)
T ss_dssp HHH
T ss_pred Hhc
Confidence 655
No 237
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=49.69 E-value=70 Score=32.95 Aligned_cols=120 Identities=15% Similarity=0.226 Sum_probs=71.1
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|++.|.++++- .|..+....+...-..|++.+...+ .| .++.+...+++.+-..+
T Consensus 106 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~-- 166 (364)
T 4h27_A 106 MAAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGW-- 166 (364)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTE--
T ss_pred HHHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCe--
Confidence 34677799999998875 2333333445555567998776642 23 35665555544322111
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cC-CCCcEEEEcCc
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CR-PDCPIFAFTST 521 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~R-P~~PIiavT~~ 521 (584)
+...+.. .+ .....-...+.|+.++++ .++||+.+-+|.+..-+++ .. |.++||+|-+.
T Consensus 167 -------~~~~~~~--np-~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~ 232 (364)
T 4h27_A 167 -------VYIPPFD--DP-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETF 232 (364)
T ss_dssp -------EEECSSC--SH-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEET
T ss_pred -------EEeCCCC--CH-HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 1111111 11 112222345667777774 6999999999998766554 33 88999999764
No 238
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=49.63 E-value=64 Score=33.27 Aligned_cols=131 Identities=16% Similarity=0.174 Sum_probs=67.8
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEc---------C----C--CC----------HHHHHHHHHHHHhhcCCCC
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAIS---------F----V--KS----------AEVINHLKSYIAARSRDSD 326 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lS---------f----V--~s----------aedV~~lr~~l~~~~~~~~ 326 (584)
.||..|++.+ +.+.+.|+|+|=+- | . |+ ..-+.++.+.++ +..+.+
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr-~avg~d 210 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVR-KNWPEN 210 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHH-HTSCTT
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHH-hcCCcc
Confidence 3677777666 45678899998776 2 2 22 122233333342 234566
Q ss_pred ceEEEeecCH----------HHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHH-HcCCCeEEehhhhHh
Q 007936 327 IAVIAKIESI----------DSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCR-QLNKPVIVASQLLES 395 (584)
Q Consensus 327 i~IiAKIEt~----------~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~-~~gKPvivATqmLeS 395 (584)
..|..||--- ++++-+..+-+.+|.|=+.-|...-. +...-+..+-..++..+ ..+.|||....
T Consensus 211 ~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~-~~~~~~~~~~~~~~~ir~~~~iPVi~~Gg---- 285 (343)
T 3kru_A 211 KPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNV-DINLYPGYQVKYAETIKKRCNIKTSAVGL---- 285 (343)
T ss_dssp SCEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCC-CCCCCTTTTHHHHHHHHHHHTCEEEEESS----
T ss_pred CCeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEee-eecccCceeehHHHHHHHhcCcccceeee----
Confidence 7888888431 22222222222278888854443211 10001112223333333 34899987632
Q ss_pred hhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 396 MIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 396 Mi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.-|.. +...++..| +|+|++.
T Consensus 286 -----i~t~e---~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 286 -----ITTQE---LAEEILSNERADLVALG 307 (343)
T ss_dssp -----CCCHH---HHHHHHHTTSCSEEEES
T ss_pred -----eeHHH---HHHHHHhchhhHHHHHH
Confidence 22222 335677788 9999986
No 239
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=49.57 E-value=1.1e+02 Score=30.45 Aligned_cols=125 Identities=10% Similarity=0.083 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++++- .|..+....+...-..|++.+...++. .| .++.+...++..+-..++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~-- 138 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRY-- 138 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTE--
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCE--
Confidence 4667889999998875 233233344555666799987765431 12 345544444332211110
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhcc----C-CCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSRC----R-PDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr~----R-P~~PIiavT~~~~ 523 (584)
+..++.. .+..+..-....+.|+.++++ .+.||+.+-+|.++.-++++ . |.+.|+++.+...
T Consensus 139 ------~~~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 139 ------VMLKQFE--NPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp ------ECCCTTT--CTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred ------EECCCCC--CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 1112111 111111113344677777775 69999999999998777653 4 9999999988643
No 240
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=49.55 E-value=36 Score=34.71 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=42.1
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....+++|- .+++ ..+++.++|.+.+.+++.|++.++-.++++.+|++ .|..+.|++|..
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA---VGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---hCCCCEEEEECC
Confidence 4455566552 2343 45667789999999999998887777777777764 455566777763
No 241
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=49.37 E-value=23 Score=34.73 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=35.4
Q ss_pred CCHHHHHHHH-HhcCCEEEEeCCCC-------CHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 118 CGFEQLEALA-VGGMNVARINMCHG-------TREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 118 ~~~e~l~~li-~~Gm~v~RiN~sHg-------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
.+.+.++.|. +.|+|++|+-+... +++...+.++.+=+...+.| +.+++|+-
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~vild~h 98 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND--MYAIIGWH 98 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC--CEEEEEcC
Confidence 4678999999 79999999987642 23344445555555555666 56677874
No 242
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=49.33 E-value=66 Score=30.98 Aligned_cols=142 Identities=18% Similarity=0.230 Sum_probs=77.3
Q ss_pred CCCCccCHhh----hHHhHhcCCCEEEE-----cCCCC----HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHH
Q 007936 279 PTISPKDWLD----IDFGITEGVDFIAI-----SFVKS----AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEI 345 (584)
Q Consensus 279 p~lt~kD~~d----I~~al~~gvD~I~l-----SfV~s----aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeI 345 (584)
|++..-|..+ ++.+.+.|+|+|-+ +||.+ .+.++++|+.. +....+--+|+.++. -++..
T Consensus 9 psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-----~~~~~vhlmv~dp~~--~i~~~ 81 (230)
T 1tqj_A 9 PSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-----KKTLDVHLMIVEPEK--YVEDF 81 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-----CSEEEEEEESSSGGG--THHHH
T ss_pred EEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-----CCcEEEEEEccCHHH--HHHHH
Confidence 4444444443 45667789998633 34422 24444444332 222344477777632 35666
Q ss_pred HHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 346 ILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 346 l~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
+++ +||+.+.-.-. +. + .-.+.++.++++|+-+++++ +|. |..|. ..++..++|.+++.
T Consensus 82 ~~aGadgv~vh~e~~----~~-~---~~~~~~~~i~~~g~~~gv~~--------~p~-t~~e~---~~~~~~~~D~v~~m 141 (230)
T 1tqj_A 82 AKAGADIISVHVEHN----AS-P---HLHRTLCQIRELGKKAGAVL--------NPS-TPLDF---LEYVLPVCDLILIM 141 (230)
T ss_dssp HHHTCSEEEEECSTT----TC-T---THHHHHHHHHHTTCEEEEEE--------CTT-CCGGG---GTTTGGGCSEEEEE
T ss_pred HHcCCCEEEECcccc----cc-h---hHHHHHHHHHHcCCcEEEEE--------eCC-CcHHH---HHHHHhcCCEEEEE
Confidence 666 89999861100 11 1 13467888899999999974 221 22221 34556789977553
Q ss_pred -CCCCC--CCChHHHHHHHHHHHHHH
Q 007936 425 -GESAM--GQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 425 -~ETa~--G~yPveaV~~m~~I~~~a 447 (584)
-+... -+|+-..++.++++.+..
T Consensus 142 sv~pg~ggq~~~~~~~~~i~~lr~~~ 167 (230)
T 1tqj_A 142 SVNPGFGGQSFIPEVLPKIRALRQMC 167 (230)
T ss_dssp SSCC----CCCCGGGHHHHHHHHHHH
T ss_pred EeccccCCccCcHHHHHHHHHHHHHH
Confidence 22222 246666666666665544
No 243
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=49.17 E-value=30 Score=35.07 Aligned_cols=65 Identities=14% Similarity=0.214 Sum_probs=47.6
Q ss_pred cCHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 284 KDWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaR 356 (584)
.+.++++.+++.|+|||.+..+ ++++++++++.++ .++++.| +=.. -.+|+.++++. +|+|-++.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~-----~~ipi~A-sGGI-t~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG-----GRVPLEA-SGNM-TLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT-----TSSCEEE-ESSC-CHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC-----CCCeEEE-EcCC-CHHHHHHHHHcCCCEEEEcH
Confidence 4577888899999999999987 6788888887772 2355544 1000 15788888888 99999854
No 244
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=49.09 E-value=2.2e+02 Score=29.84 Aligned_cols=138 Identities=15% Similarity=0.141 Sum_probs=89.1
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee-c-CHHHHhcHHHHHHh-CCEEEEeCCcccccC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI-E-SIDSLKNLEEIILA-SDGAMVARGDLGAQI 363 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI-E-t~~av~NldeIl~~-sDGImIaRGDLg~ei 363 (584)
+.|..-.+.|+|.|=+.. .+.++.+.++.+-+. .+++++|-| - ...++. =++. +|.+=|.||.+|-
T Consensus 50 ~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~----~~vPlvaDiHf~~~lal~----a~e~G~dklRINPGNig~-- 118 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK----SPMPVIADIHFAPSYAFL----SMEKGVHGIRINPGNIGK-- 118 (366)
T ss_dssp HHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH----CSSCEEEECCSCHHHHHH----HHHTTCSEEEECHHHHSC--
T ss_pred HHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc----CCCCEEEeCCCCHHHHHH----HHHhCCCeEEECCcccCc--
Confidence 334556689999988875 456666666665431 358999988 2 333333 2334 8999999999973
Q ss_pred CCCChHHHHHHHHHHHHHcCCCeEE-------ehhhhHhhhcCCCCChhhH-----HHHHHHHHcccceEeecCCCCCCC
Q 007936 364 PLEQVPSAQQKIVQLCRQLNKPVIV-------ASQLLESMIEYPTPTRAEV-----ADVSEAVRQRADALMLSGESAMGQ 431 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~gKPviv-------ATqmLeSMi~~p~PTrAEv-----~Dv~nav~~G~D~imLs~ETa~G~ 431 (584)
..--+.++++|+++|+|+=+ ...+|+.+- .||...+ ..+.-+-..|+|-+.+|--.+
T Consensus 119 -----~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S--- 187 (366)
T 3noy_A 119 -----EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIKGS--- 187 (366)
T ss_dssp -----HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---
T ss_pred -----hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---
Confidence 22346799999999999766 355665542 3443332 233335667999999985544
Q ss_pred ChHHHHHHHHHHHHH
Q 007936 432 FPDKALTVLRSVSLR 446 (584)
Q Consensus 432 yPveaV~~m~~I~~~ 446 (584)
-+..+|+.-+.+..+
T Consensus 188 ~v~~~i~ayr~la~~ 202 (366)
T 3noy_A 188 DVLQNVRANLIFAER 202 (366)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhc
Confidence 466666665555443
No 245
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=48.99 E-value=1.6e+02 Score=30.69 Aligned_cols=90 Identities=16% Similarity=0.203 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE
Q 007936 308 AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI 387 (584)
Q Consensus 308 aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi 387 (584)
.+.++.++++++.. .+.+++-+-....++-+.+. +|.+-||-+++- +..+++.+-+.||||+
T Consensus 156 ~egl~~l~~~~~e~----Gl~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~-----------n~~LL~~va~~~kPVi 217 (350)
T 1vr6_A 156 EKGLEYLREAADKY----GMYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ-----------NFRLLSKAGSYNKPVL 217 (350)
T ss_dssp HHHHHHHHHHHHHH----TCEEEEECSSGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHHHc----CCcEEEEeCCHHHHHHHHHh---CCEEEECccccc-----------CHHHHHHHHccCCcEE
Confidence 57888888887432 37899988887777666664 799999866551 2234555558899999
Q ss_pred EehhhhHhhhcCCCCChhhHHHHHHHHH-cccceEee
Q 007936 388 VASQLLESMIEYPTPTRAEVADVSEAVR-QRADALML 423 (584)
Q Consensus 388 vATqmLeSMi~~p~PTrAEv~Dv~nav~-~G~D~imL 423 (584)
+.|.| ..|-.|+...++++. .|.+-++|
T Consensus 218 lk~G~--------~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 218 LKRGF--------MNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp EECCT--------TCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EcCCC--------CCCHHHHHHHHHHHHHCCCCeEEE
Confidence 98643 247788888788664 46644555
No 246
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=48.78 E-value=79 Score=31.72 Aligned_cols=69 Identities=9% Similarity=0.118 Sum_probs=44.2
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEe
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIa 355 (584)
..+.++.+...|+|||++-.=..+.+-.++..++...... ...++..|=..+. ..|..++.. +|+||+.
T Consensus 49 ~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~-~~~~~VRv~~~d~-~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 49 SSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPY-PSQPVVRPSWNDP-VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp CHHHHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTS-SSEEEEECSSSCH-HHHHHHHHTTCCEEEES
T ss_pred CHHHHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhc-CCCEEEEECCCCH-HHHHHHHhCCCCEEEeC
Confidence 3566788889999999998755555555565555432222 4568888843332 256666665 7899873
No 247
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=48.77 E-value=1.6e+02 Score=29.68 Aligned_cols=131 Identities=10% Similarity=0.080 Sum_probs=79.0
Q ss_pred CCCccCHhhhHHhHhcCCCEEEEcC-------------CCCHHHHH-HHHHHHHhhcCCCCceEEEeecC-------HHH
Q 007936 280 TISPKDWLDIDFGITEGVDFIAISF-------------VKSAEVIN-HLKSYIAARSRDSDIAVIAKIES-------IDS 338 (584)
Q Consensus 280 ~lt~kD~~dI~~al~~gvD~I~lSf-------------V~saedV~-~lr~~l~~~~~~~~i~IiAKIEt-------~~a 338 (584)
-+|.+|..--+.+-+.|+|.|.+.. -=|.+++. ..+...+ .. ....|++=++- .++
T Consensus 21 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r--~~-~~~~vvaD~pfgsy~~s~~~a 97 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVAR--GA-KNAMIVSDLPFGAYQQSKEQA 97 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH--HC-SSSEEEEECCTTSSSSCHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh--hC-CCCeEEEECCCCCccCCHHHH
Confidence 4577888888888899999997752 11244444 4444442 22 34677787763 467
Q ss_pred HhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEeh----hhh---HhhhcCCCCChhh--HH
Q 007936 339 LKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVAS----QLL---ESMIEYPTPTRAE--VA 408 (584)
Q Consensus 339 v~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivAT----qmL---eSMi~~p~PTrAE--v~ 408 (584)
++|...+++. ++||-+-=|+ .+...|+++.++|.||+-.- |-. .-..-..+..+++ +.
T Consensus 98 ~~na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~ 165 (275)
T 1o66_A 98 FAAAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLN 165 (275)
T ss_dssp HHHHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHH
Confidence 8888899987 7999886552 33456677788999987321 111 1111111212222 45
Q ss_pred HHHHHHHcccceEeecC
Q 007936 409 DVSEAVRQRADALMLSG 425 (584)
Q Consensus 409 Dv~nav~~G~D~imLs~ 425 (584)
|..-....|+|+++|=+
T Consensus 166 rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 166 DAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp HHHHHHHTTCSEEEEES
T ss_pred HHHHHHHcCCcEEEEec
Confidence 66667788999999853
No 248
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=48.59 E-value=1.2e+02 Score=30.20 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=58.4
Q ss_pred HhhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEe
Q 007936 286 WLDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIa 355 (584)
.+.++|-++.|+|+|++. +.-|.++=.++.+...+. .+. ||+-+ -|.++++.....-+. +||+|+-
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~-~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA-ARR---VIVQVASLNADEAIALAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH-CSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH-hCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 345578889999999873 445555555555554322 222 88887 347777766666655 8999997
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+-.+.--.+.+.+...-+ ..|.+.+.|+++-
T Consensus 98 ~P~y~~~~s~~~l~~~f~---~va~a~~lPiilY 128 (286)
T 2r91_A 98 PPYYFPRLSERQIAKYFR---DLCSAVSIPVFLY 128 (286)
T ss_dssp CSCSSTTCCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCcCCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 655422012233333333 4455668999874
No 249
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=48.46 E-value=20 Score=37.21 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=39.1
Q ss_pred HhhhHHhHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEE
Q 007936 286 WLDIDFGITEGVDFIAISFV---------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGA 352 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV---------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGI 352 (584)
.++++.+.+.|+|+|.++.- -+.+-+.++++.+ +.++.||+- -||.+-+++.+. +|++
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~-----~~~ipvia~----GGI~~~~D~~k~l~~GAdaV 306 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAA-----QGRIPVFLD----GGVRRGTDVFKALALGAAGV 306 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHT-----TTSSCEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHh-----CCCCEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 57788999999999999652 2233344444443 335777762 344444444433 8999
Q ss_pred EEeC
Q 007936 353 MVAR 356 (584)
Q Consensus 353 mIaR 356 (584)
+|||
T Consensus 307 ~iGr 310 (370)
T 1gox_A 307 FIGR 310 (370)
T ss_dssp EECH
T ss_pred eecH
Confidence 9997
No 250
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=48.39 E-value=57 Score=32.43 Aligned_cols=116 Identities=16% Similarity=0.225 Sum_probs=70.8
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEE--EEeCCcccccCCC
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGA--MVARGDLGAQIPL 365 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGI--mIaRGDLg~ei~~ 365 (584)
-++.+.+.|+|++++|=.- .++..++++.++.. | +..|--+=-....+.+.+|.+.++|. ++.+ .| -.|.
T Consensus 108 F~~~~~~aGvdG~IipDLP-~eE~~~~~~~~~~~--G--l~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~ 179 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELS-FEESDDLIKECERY--N--IALITLVSVTTPKERVKKLVKHAKGFIYLLAS--IG-ITGT 179 (252)
T ss_dssp HHHHHHHTTEEEEECTTCC-GGGCHHHHHHHHHT--T--CEECEEEETTSCHHHHHHHHTTCCSCEEEECC--SC-SSSC
T ss_pred HHHHHHHcCCCEEEeCCCC-HHHHHHHHHHHHHc--C--CeEEEEeCCCCcHHHHHHHHHhCCCeEEEEec--CC-CCCc
Confidence 3466788999999999873 45678888888532 2 33333332222357788999888766 3332 01 1122
Q ss_pred C-ChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 366 E-QVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 366 e-~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
. .+..-.+..++..+++ ++|+++.. ..=|.+.+. .+..++|++...
T Consensus 180 ~~~~~~~~~~~v~~vr~~~~~Pv~vGf---------GIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 180 KSVEEAILQDKVKEIRSFTNLPIFVGF---------GIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSCEEEES---------SCCSHHHHH----HHTTTSSEEEEC
T ss_pred ccCCCHHHHHHHHHHHHhcCCcEEEEc---------CcCCHHHHH----HHHhcCCEEEEC
Confidence 2 3344456777777776 77999863 344444333 334579999875
No 251
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=48.25 E-value=1.1e+02 Score=30.49 Aligned_cols=137 Identities=15% Similarity=0.176 Sum_probs=73.2
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhc-CC-CCceEEE--eecCHH--HH--------------hcHHHHHHh-
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARS-RD-SDIAVIA--KIESID--SL--------------KNLEEIILA- 348 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~-~~-~~i~IiA--KIEt~~--av--------------~NldeIl~~- 348 (584)
+.+.+.|+|++.+.=.--.+-++.+++.++... .+ ..+.+++ .+-+.. .+ .++-.....
T Consensus 77 ~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~ 156 (259)
T 3tfx_A 77 KALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS 156 (259)
T ss_dssp HHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 345678999999976666777888887774311 12 1334444 443331 12 122222222
Q ss_pred -CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHH------HHHHHHcccceE
Q 007936 349 -SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVAD------VSEAVRQRADAL 421 (584)
Q Consensus 349 -sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~D------v~nav~~G~D~i 421 (584)
.||+... .+++..+.+ ..|.-.++-|. .-+|.-+...| ...++..|+|.+
T Consensus 157 G~dGvV~s---------~~e~~~ir~-------~~~~~f~~vtP-------GIr~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 157 GADGVICS---------PLEVKKLHE-------NIGDDFLYVTP-------GIRPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp TCCEEECC---------GGGHHHHHH-------HHCSSSEEEEC-------CCCCC-----------CHHHHHHTTCSEE
T ss_pred CCCEEEEC---------HHHHHHHHh-------hcCCccEEEcC-------CcCCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 4677642 233322221 12333232221 22666666666 667899999999
Q ss_pred eecCCCCCCCChHHHHHHHHHHHHHHhh
Q 007936 422 MLSGESAMGQFPDKALTVLRSVSLRIEK 449 (584)
Q Consensus 422 mLs~ETa~G~yPveaV~~m~~I~~~aE~ 449 (584)
+...-......|.++++.+++...++..
T Consensus 214 VvGr~I~~a~dp~~a~~~i~~~~~~~~~ 241 (259)
T 3tfx_A 214 VVGRPITLASDPKAAYEAIKKEFNAENL 241 (259)
T ss_dssp EECHHHHTSSSHHHHHHHHHHHHTCTTC
T ss_pred EEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 8876555567899999887765444433
No 252
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=48.00 E-value=1.1e+02 Score=30.91 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=54.4
Q ss_pred CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcC-CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCC
Q 007936 349 SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLN-KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGES 427 (584)
Q Consensus 349 sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~g-KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ET 427 (584)
+|.||--....|...|+.. +...+.|++. ..+ .|||++- ..-|. +|++.++..|+|++++..=-
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~G---------GI~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDA---------GLGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEES---------CCCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeC---------CCCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6777764444555555544 4443333221 235 8999863 23333 57899999999999998777
Q ss_pred CCCCChHHHHHHHHHHHHHH
Q 007936 428 AMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 428 a~G~yPveaV~~m~~I~~~a 447 (584)
+.++.|.+-.+.|..-++.-
T Consensus 211 ~~a~dP~~ma~af~~Av~ag 230 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVEAG 230 (268)
T ss_dssp HTSSSHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHH
Confidence 78889987777776654443
No 253
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=47.99 E-value=90 Score=31.73 Aligned_cols=127 Identities=14% Similarity=0.134 Sum_probs=65.9
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEEcC-------------CCC------------HHHHHHHHHHHHhhcCCCCc
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAISF-------------VKS------------AEVINHLKSYIAARSRDSDI 327 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~lSf-------------V~s------------aedV~~lr~~l~~~~~~~~i 327 (584)
||..|++++ +.+.+.|+|+|=+-. .+. ..-+.++.+.++.. . +.
T Consensus 134 mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~-v--~~ 210 (338)
T 1z41_A 134 MSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV-W--DG 210 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-C--CS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH-c--CC
Confidence 566665544 456788999986543 222 12233444444322 2 46
Q ss_pred eEEEeecC---------H-HHHhcHHHHHHh-CCEEEEeCCccc-ccCCCCChHHHHHHHHH-HHHHcCCCeEEehhhhH
Q 007936 328 AVIAKIES---------I-DSLKNLEEIILA-SDGAMVARGDLG-AQIPLEQVPSAQQKIVQ-LCRQLNKPVIVASQLLE 394 (584)
Q Consensus 328 ~IiAKIEt---------~-~av~NldeIl~~-sDGImIaRGDLg-~ei~~e~V~~~Qk~II~-~c~~~gKPvivATqmLe 394 (584)
.|..||-- . ++++-+..+.+. +|.|-+.-|... ...+... ..+-..++ ..+..+.||+....
T Consensus 211 pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Gg--- 285 (338)
T 1z41_A 211 PLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGAVGM--- 285 (338)
T ss_dssp CEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEECSS---
T ss_pred cEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEEECC---
Confidence 78888732 1 222222222223 799988766432 1112111 11222222 23345899987532
Q ss_pred hhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 395 SMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 395 SMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.-|. .+...++..| +|+|++.
T Consensus 286 ------i~s~---~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 286 ------ITDG---SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ------CCSH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCCH---HHHHHHHHcCCceEEeec
Confidence 2233 3456678888 9999996
No 254
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=47.97 E-value=91 Score=31.22 Aligned_cols=125 Identities=6% Similarity=0.063 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|+.+|.++++- .|.......+...-..|++.+...++. .| .++.+...++..+-..
T Consensus 80 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~--- 141 (322)
T 1z7w_A 80 VGLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPN--- 141 (322)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTT---
T ss_pred HHHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCC---
Confidence 34567889999998875 233333344555666799977654321 12 3455544444332211
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc--CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL--EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l--~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
.+..++.. .+..+.......+.|+.+++ +.++||+.+-+|.+..-+++ ..|.+.|+++.+...
T Consensus 142 ------~~~i~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 142 ------GYMLQQFE--NPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp ------EEECCTTT--CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ------eEeCCCCC--ChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 11112111 11111122334467777777 47999999999999877665 469999999988643
No 255
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=47.95 E-value=76 Score=32.82 Aligned_cols=150 Identities=9% Similarity=0.073 Sum_probs=78.0
Q ss_pred cCHhhhHHhH-hcCCC-EEEEcCC-----------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--
Q 007936 284 KDWLDIDFGI-TEGVD-FIAISFV-----------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-- 348 (584)
Q Consensus 284 kD~~dI~~al-~~gvD-~I~lSfV-----------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-- 348 (584)
.|+......+ +.|+| +|-+.+= ++++.+.++.+.++ . ..++.|+.||=--.....+.++++.
T Consensus 141 ~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~--~-~~~~PV~vKi~p~~~~~~~a~~~~~ag 217 (345)
T 3oix_A 141 EETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVF--T-YFTKPLGIKLPPYFDIVHFDQAAAIFN 217 (345)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHT--T-TCCSCEEEEECCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHH--H-HhCCCeEEEECCCCCHHHHHHHHHHhC
Confidence 4444433333 35766 7776543 45666666666663 2 2357899999432222333333333
Q ss_pred CCEE---E----------EeCCccc----ccC----CCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChh
Q 007936 349 SDGA---M----------VARGDLG----AQI----PLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRA 405 (584)
Q Consensus 349 sDGI---m----------IaRGDLg----~ei----~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrA 405 (584)
+|+| - |.+.-.. .+. |....+...+.+-+..++. ..|+|...- .-|
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GG---------I~s-- 286 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGG---------VXT-- 286 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESS---------CCS--
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECC---------CCC--
Confidence 3433 1 2221110 011 1122344444454444555 478887543 222
Q ss_pred hHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 406 EVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 406 Ev~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
..|+..++..|||+|++..--..+ -| .++.+|....+.|+..
T Consensus 287 -~~da~~~l~aGAd~V~igra~~~~-gP----~~~~~i~~~L~~~l~~ 328 (345)
T 3oix_A 287 -GRDAFEHILCGASMVQIGTALHQE-GP----QIFKRITKELXAIMTE 328 (345)
T ss_dssp -HHHHHHHHHHTCSEEEESHHHHHH-CT----HHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHhCCCEEEEChHHHhc-Ch----HHHHHHHHHHHHHHHH
Confidence 357788888999999997431121 13 3566777777776543
No 256
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=47.72 E-value=27 Score=29.62 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=31.3
Q ss_pred HHHHHHHHhhcCCcEEEEccCC---------chHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAKMANNLEVDALFVYTKT---------GHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~s---------G~tA~~lSr~RP~~PIiav 518 (584)
+...++.|.+.+++.||+-++. |+++..+.+.- .|||+.+
T Consensus 88 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 88 AEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 4455778889999999998763 67888888774 5999876
No 257
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=47.60 E-value=68 Score=31.93 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=63.0
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEeCCeEEEEEEcCceeCC--CceeeeccCCcccCCccccCCCCCccCHhhhHHhHhc
Q 007936 221 VKVGDELLVDGG---MVRFEVIEKIGPDVKCRCTDPGLLLP--RANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITE 295 (584)
Q Consensus 221 v~vGd~I~idDG---~i~l~V~~~~~~~i~c~v~~~G~l~s--~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~ 295 (584)
+++||.|.+-|| ....+|.+++++.+.+++...-.... .-.|. + ...+|. .++...-|+.+.++
T Consensus 37 l~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~-------L---~~al~K-~~r~e~ilqkatEL 105 (268)
T 1vhk_A 37 MNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVY-------I---ASGLPK-GDKLEWIIQKGTEL 105 (268)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEE-------E---EEECCS-TTHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEE-------E---EEeeec-CccHHHHHHHHHHh
Confidence 688999998664 55677888888888877764211111 11122 1 122333 24444467889999
Q ss_pred CCCEEEEcCC-CC---------HHHHHHHHHHHHh--hcCCCCceEEEeecCHHHHhcHHHHHHh---CCEEEEe
Q 007936 296 GVDFIAISFV-KS---------AEVINHLKSYIAA--RSRDSDIAVIAKIESIDSLKNLEEIILA---SDGAMVA 355 (584)
Q Consensus 296 gvD~I~lSfV-~s---------aedV~~lr~~l~~--~~~~~~i~IiAKIEt~~av~NldeIl~~---sDGImIa 355 (584)
||+-|..=.. ++ ...+.+.++++.. +++++ ..+.+|+.+. +++++++. .|..+++
T Consensus 106 GV~~I~p~~s~Rsv~~~~~~~~~kk~~Rw~~i~~eAaeQs~R--~~iP~v~~~~---~~~~~l~~~~~~~~~lv~ 175 (268)
T 1vhk_A 106 GAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYR--NEVPRVMDVH---SFQQLLQRMQDFDKCVVA 175 (268)
T ss_dssp TCCEEEEECCTTCCCC---------HHHHHHHHHHHHHHTTC--SSCCEECCCB---CHHHHHHHGGGSSEEEEE
T ss_pred CcCEEEEEEeeeeeeecccchhhhHHHHHHHHHHHHHHHcCC--CCCcEEecCC---CHHHHHhhCccCCeEEEE
Confidence 9996543222 22 1235555555542 23333 3455555443 34444432 3555654
No 258
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=47.45 E-value=14 Score=38.77 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=50.0
Q ss_pred CCCccCHhhh-HHhHhcCCCEEEEcCCCC--------------------------HHHHHHHHHHHHhhcCCCCceEEE-
Q 007936 280 TISPKDWLDI-DFGITEGVDFIAISFVKS--------------------------AEVINHLKSYIAARSRDSDIAVIA- 331 (584)
Q Consensus 280 ~lt~kD~~dI-~~al~~gvD~I~lSfV~s--------------------------aedV~~lr~~l~~~~~~~~i~IiA- 331 (584)
.+++.|..++ +.+.+.|+|+|.++.-.. -+.|.++++.+ +.++.||+
T Consensus 230 ~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v-----~~~ipvI~~ 304 (367)
T 3zwt_A 230 DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALT-----QGRVPIIGV 304 (367)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHT-----TTCSCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHc-----CCCceEEEE
Confidence 3455555555 445789999999874320 13444444443 33567766
Q ss_pred -eecCHHHHhcHHHHHH-hCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcC
Q 007936 332 -KIESIDSLKNLEEIIL-ASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLN 383 (584)
Q Consensus 332 -KIEt~~av~NldeIl~-~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~g 383 (584)
-|.|.+-+ .+.+. -+|+|||||+=|-- +..-+..+.+.+-..+.+.|
T Consensus 305 GGI~s~~da---~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G 353 (367)
T 3zwt_A 305 GGVSSGQDA---LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQG 353 (367)
T ss_dssp SSCCSHHHH---HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHH---HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcC
Confidence 35554333 22232 38999999986511 12223334444444444444
No 259
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=47.40 E-value=81 Score=32.00 Aligned_cols=124 Identities=15% Similarity=0.176 Sum_probs=73.3
Q ss_pred hhhHHhHhcCCCEEEEc---------CCC-----CHHHHHHHHHHHHhhcCCCCceEEEee--cCHHHHhcHHHHHHh-C
Q 007936 287 LDIDFGITEGVDFIAIS---------FVK-----SAEVINHLKSYIAARSRDSDIAVIAKI--ESIDSLKNLEEIILA-S 349 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS---------fV~-----saedV~~lr~~l~~~~~~~~i~IiAKI--Et~~av~NldeIl~~-s 349 (584)
+..+..-+.|+|-|.+= |-. +.++|+++++.. .+++++|. -. ++..+.+.+. +
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-------~iPvl~k~~i~~---ide~qil~aaGA 101 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-------SINVLAKVRIGH---FVEAQILEELKV 101 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-------CSEEEEEEETTC---HHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-------CCCEEEeccCCc---HHHHHHHHHcCC
Confidence 33456678899976554 333 788888887654 48899873 33 3333333344 8
Q ss_pred CEEEEeCCcccccCCCCChHHHHHHHHHHHHH--cCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCC
Q 007936 350 DGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQ--LNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGES 427 (584)
Q Consensus 350 DGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~--~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ET 427 (584)
|+| |....+.+.+ ++..+++ .|.++++- ..+.. +...++..|+|.|-..++-
T Consensus 102 D~I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~-----------v~~~~---Ea~~a~~~Gad~I~v~g~~ 155 (297)
T 4adt_A 102 DML-----DESEVLTMAD-------EYNHINKHKFKTPFVCG-----------CTNLG---EALRRISEGASMIRTKGEA 155 (297)
T ss_dssp SEE-----EEETTSCCSC-------SSCCCCGGGCSSCEEEE-----------ESSHH---HHHHHHHHTCSEEEECCCT
T ss_pred CEE-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEE-----------eCCHH---HHHHHHhCCCCEEEECCCc
Confidence 998 3222222222 2233344 57777653 12333 3455677899999988762
Q ss_pred CCCCChHHHHHHHHHHHHHH
Q 007936 428 AMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 428 a~G~yPveaV~~m~~I~~~a 447 (584)
-.| .-+++|++++.+..++
T Consensus 156 gTG-~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 156 GTG-NIIEAIKHIRTVNNEI 174 (297)
T ss_dssp TSC-CCHHHHHHHHHHHHHH
T ss_pred CCC-chHHHHHHHHHhhhhh
Confidence 222 3489999998875433
No 260
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=47.03 E-value=83 Score=31.46 Aligned_cols=90 Identities=18% Similarity=0.319 Sum_probs=50.5
Q ss_pred HhhhHHhHhcCCCE--EEEcC---------CCCHH-----------HHHHHHHHHHhhcCCCCceEEEee-cCH---HHH
Q 007936 286 WLDIDFGITEGVDF--IAISF---------VKSAE-----------VINHLKSYIAARSRDSDIAVIAKI-ESI---DSL 339 (584)
Q Consensus 286 ~~dI~~al~~gvD~--I~lSf---------V~sae-----------dV~~lr~~l~~~~~~~~i~IiAKI-Et~---~av 339 (584)
.+.++...+.|+|+ +.+|| ++.+. ++-++.+.++.. +.+++++.+- .++ -|+
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~--~~~~Pivlm~Y~n~v~~~g~ 114 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRAR--NPETPIGLLMYANLVYARGI 114 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--CTTSCEEEEECHHHHHHTCH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCCCEEEEecCcHHHHHhH
Confidence 44445556789998 56777 44322 222222223211 2356776652 221 245
Q ss_pred hcH-HHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE
Q 007936 340 KNL-EEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI 387 (584)
Q Consensus 340 ~Nl-deIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi 387 (584)
+++ ++..++ +||+++. ++|+|+ .....+.|+++|...+
T Consensus 115 ~~f~~~~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeEE
Confidence 554 333344 8999994 556665 4678889999998655
No 261
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=46.44 E-value=1.3e+02 Score=29.63 Aligned_cols=57 Identities=21% Similarity=0.174 Sum_probs=39.1
Q ss_pred HcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhh
Q 007936 381 QLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEK 449 (584)
Q Consensus 381 ~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~ 449 (584)
..+.|+++.- ..-|. .|+..++..|+|+++...--.....|.++++-+.+.+++...
T Consensus 176 ~~~iPviv~g---------GI~t~---eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 176 QAKVPVIVDA---------GIGSP---KDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp HCSSCBEEES---------CCCSH---HHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEe---------CCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 3488998762 22222 456778889999999875333335688888888877766554
No 262
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=46.36 E-value=12 Score=38.15 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=41.5
Q ss_pred CCccCHhh-hHHhHhcCCCEEEEcCCC------------------C--------HHHHHHHHHHHHhhcCCCCceEEE--
Q 007936 281 ISPKDWLD-IDFGITEGVDFIAISFVK------------------S--------AEVINHLKSYIAARSRDSDIAVIA-- 331 (584)
Q Consensus 281 lt~kD~~d-I~~al~~gvD~I~lSfV~------------------s--------aedV~~lr~~l~~~~~~~~i~IiA-- 331 (584)
++..|... .+.+.+.|+|+|.++.-. + .+.+.++++.+ +.++.||+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~-----~~~ipVi~~G 296 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL-----NGRLPIIGVG 296 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH-----TTSSCEEEES
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh-----CCCCCEEEEC
Confidence 34444333 456778999999987320 1 13444555544 23577776
Q ss_pred eecCHHHHhcHHHHHHh-CCEEEEeCCcc
Q 007936 332 KIESIDSLKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 332 KIEt~~av~NldeIl~~-sDGImIaRGDL 359 (584)
-|.|.+-+. +.++. +|+|++||+=|
T Consensus 297 GI~~~~da~---~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 297 GIDSVIAAR---EKIAAGASLVQIYSGFI 322 (336)
T ss_dssp SCCSHHHHH---HHHHHTCSEEEESHHHH
T ss_pred CCCCHHHHH---HHHHCCCCEEEeeHHHH
Confidence 466654432 23323 99999998744
No 263
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=46.19 E-value=1.1e+02 Score=30.46 Aligned_cols=96 Identities=9% Similarity=0.022 Sum_probs=59.4
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ ++--|.++=.++.+...+ ..+. ||+-+= |.++++.....-+. +||+|+-+
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~-~~~g---ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYD-VTHK---LIFQVGSLNLNDVMELVKFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTT-TCSC---EEEECCCSCHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HhCC---eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4557788999999987 355566666666666532 2222 888873 46777666666555 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.--.+.+.+...-+ ..|.+.+.|+++-
T Consensus 100 P~y~~~~s~~~l~~~f~---~va~a~~lPiilY 129 (288)
T 2nuw_A 100 PYYFPRLPEKFLAKYYE---EIARISSHSLYIY 129 (288)
T ss_dssp CCSSCSCCHHHHHHHHH---HHHHHCCSCEEEE
T ss_pred CcCCCCCCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 55422012233333333 4455668999874
No 264
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=45.95 E-value=36 Score=34.32 Aligned_cols=98 Identities=12% Similarity=0.073 Sum_probs=59.8
Q ss_pred hhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++. +--|.++=.++.+...+ ..+.++.||+-+ -|.++++.....-+. +||+|+-+
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIE-AAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHH-HHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHH-HhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 34567889999998753 33344444444444432 224568888877 467777777766666 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- ...+.+. +..-..|.+.+.|+++-
T Consensus 108 P~y~~-~~~~~l~---~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 108 EAYFP-LKDAQIE---SYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CCSSC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCCC-CCHHHHH---HHHHHHHHHCCCCEEEE
Confidence 54422 1223333 34444455568999974
No 265
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=45.78 E-value=79 Score=32.17 Aligned_cols=124 Identities=12% Similarity=0.108 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|+..|.++++- .|.......+...-..|++.+...++. .| .++.+...++..+...++
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y-- 154 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKY-- 154 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTE--
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcE--
Confidence 4667889999999875 233333344555666799988765431 12 345554444432211100
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
+...+.. .+..+..-....+ |+.++++ .++||+.+-+|.++.-+++ ..|.+.|+++.+...
T Consensus 155 ------~~~~~~~--n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 155 ------FVANQFG--NPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp ------EECCTTT--CHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ------EECCCCC--ChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 1111111 1111111134445 8888875 6999999999999877664 469999999998654
No 266
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=45.77 E-value=20 Score=36.77 Aligned_cols=85 Identities=13% Similarity=0.302 Sum_probs=59.0
Q ss_pred CceEEEeecCH--------HHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhh
Q 007936 326 DIAVIAKIESI--------DSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESM 396 (584)
Q Consensus 326 ~i~IiAKIEt~--------~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSM 396 (584)
.++|+++.|+. .-.+.++.++.. ..+|++.|||+- -+.+++.|++.|.|++. |
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T------ 110 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S------ 110 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E------
Confidence 57777776652 122345555543 579999999983 23588999999999886 3
Q ss_pred hcCCCCChhhHHHHHHHHHc---------------ccceEeecCCCCCCC
Q 007936 397 IEYPTPTRAEVADVSEAVRQ---------------RADALMLSGESAMGQ 431 (584)
Q Consensus 397 i~~p~PTrAEv~Dv~nav~~---------------G~D~imLs~ETa~G~ 431 (584)
+.+|-.=+..+.+++.. +--++++.|++-.||
T Consensus 111 ---~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 111 ---KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ---CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ---CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 34455555667777665 235899999999999
No 267
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=45.59 E-value=1.5e+02 Score=29.58 Aligned_cols=119 Identities=15% Similarity=0.179 Sum_probs=70.1
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++++- .|....-..+...-..|++.+...+ .| .++.+...++..+ +
T Consensus 68 alA~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~----- 124 (318)
T 2rkb_A 68 AAAYAARKLGIPATIV-----------LPESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-D----- 124 (318)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-T-----
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-c-----
Confidence 4667899999998875 2222222344455567998776432 23 4555444433321 0
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhcc-----CCCCcEEEEcCch
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSRC-----RPDCPIFAFTSTT 522 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr~-----RP~~PIiavT~~~ 522 (584)
+.+...+.. .+ .....-...+.++.++++ .+.||+.+-+|.++.-++++ .|...|+++.+..
T Consensus 125 ----~~~~~~~~~--n~-~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 125 ----GWENVPPFD--HP-LIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp ----TEEECCSSC--SH-HHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred ----CCEEeCCCC--Ch-hhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 111111111 11 122333455677777774 69999999999998776653 2889999998853
No 268
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=45.30 E-value=35 Score=35.46 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=47.8
Q ss_pred CHhhhHHhHhcCCCEEEEcC------------CCCHHHHHHHHHHHH-h-hcCCC-CceEEEeecCHHHHhcHHHHHHh-
Q 007936 285 DWLDIDFGITEGVDFIAISF------------VKSAEVINHLKSYIA-A-RSRDS-DIAVIAKIESIDSLKNLEEIILA- 348 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSf------------V~saedV~~lr~~l~-~-~~~~~-~i~IiAKIEt~~av~NldeIl~~- 348 (584)
+.++.+.+.+.|+|+|.++. +-+.+.+.++++... + .+.+. ++.||+- -|+.+-++|+++
T Consensus 221 t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kal 296 (393)
T 2qr6_A 221 DYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAI 296 (393)
T ss_dssp SHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHH
Confidence 35678888999999999976 444555655555510 0 11122 3788872 345555555554
Q ss_pred ---CCEEEEeCCcccccC
Q 007936 349 ---SDGAMVARGDLGAQI 363 (584)
Q Consensus 349 ---sDGImIaRGDLg~ei 363 (584)
+|++++||.=|...-
T Consensus 297 alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 297 ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHTCSEEEECGGGGGSTT
T ss_pred HcCCCEEEECHHHHcCCC
Confidence 899999998665543
No 269
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=45.06 E-value=60 Score=31.59 Aligned_cols=101 Identities=12% Similarity=0.169 Sum_probs=62.9
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCCCh
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQV 368 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V 368 (584)
+..++.|++.|=++| +++.-++.++.+-+ ... +..|=| -|..-.+..+..+++ +|-|+ .|+
T Consensus 32 ~al~~gGi~~iEvt~-~t~~a~~~I~~l~~--~~p-~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~----------- 93 (217)
T 3lab_A 32 KALVAGGVHLLEVTL-RTEAGLAAISAIKK--AVP-EAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG----------- 93 (217)
T ss_dssp HHHHHTTCCEEEEET-TSTTHHHHHHHHHH--HCT-TSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS-----------
T ss_pred HHHHHcCCCEEEEeC-CCccHHHHHHHHHH--HCC-CCeEee--ccccCHHHHHHHHHcCCCEEE-eCC-----------
Confidence 344677899888887 45555555555432 222 233333 355555556666655 55554 333
Q ss_pred HHHHHHHHHHHHHcCC------CeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 369 PSAQQKIVQLCRQLNK------PVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 369 ~~~Qk~II~~c~~~gK------PvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.-..+++.|+++|. |++= --+-.+++..|...|+|.+-+.
T Consensus 94 --~~~evi~~~~~~~v~~~~~~~~~P--------------G~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 94 --LTPELIEKAKQVKLDGQWQGVFLP--------------GVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp --CCHHHHHHHHHHHHHCSCCCEEEE--------------EECSHHHHHHHHHTTCCEEEET
T ss_pred --CcHHHHHHHHHcCCCccCCCeEeC--------------CCCCHHHHHHHHHcCCCEEEEC
Confidence 24578899999999 8762 2223456788999999999774
No 270
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=45.04 E-value=32 Score=35.94 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=40.7
Q ss_pred HhhhHHhHhcCCCEEEEcCC---------CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEE
Q 007936 286 WLDIDFGITEGVDFIAISFV---------KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGA 352 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV---------~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGI 352 (584)
.++.+.+.+.|+|+|.++.- -+.+-+.++++.+ +.++.||+- -|+.+-.+++++ +|++
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av-----~~~ipVia~----GGI~~g~Dv~kaLalGA~aV 298 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAV-----KGKIEVYMD----GGVRTGTDVLKALALGARCI 298 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHH-----TTSSEEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHh-----CCCCeEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 57788899999999999642 1224444454444 235777773 344555555554 8999
Q ss_pred EEeCC
Q 007936 353 MVARG 357 (584)
Q Consensus 353 mIaRG 357 (584)
+|||.
T Consensus 299 ~iGr~ 303 (352)
T 3sgz_A 299 FLGRP 303 (352)
T ss_dssp EESHH
T ss_pred EECHH
Confidence 99874
No 271
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=44.97 E-value=31 Score=30.06 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=33.4
Q ss_pred HHHHHHHHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEEcCc
Q 007936 478 CNSAAKMANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAFTST 521 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiavT~~ 521 (584)
+...++.|.+.++++||+-++ -|+++..+.+.- .|||+.+-+.
T Consensus 109 ~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv~~~ 160 (162)
T 1mjh_A 109 HEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEEeCC
Confidence 444567888899999999876 377888888875 5999998553
No 272
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=44.96 E-value=38 Score=34.94 Aligned_cols=57 Identities=14% Similarity=0.171 Sum_probs=37.5
Q ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCCCC-------H-HHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 114 GPATCGFEQLEALAVGGMNVARINMCHGT-------R-EWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 114 GPa~~~~e~l~~li~~Gm~v~RiN~sHg~-------~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
|....+.+.++.|.+.|+|++||-++... . +...+.++.+=+...+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 43344689999999999999999997532 1 223334444433444555 778889874
No 273
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=44.92 E-value=26 Score=30.12 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=32.4
Q ss_pred HHHHHHHHhhcCCcEEEEccCC--------chHHHHHhccCCCCcEEEEcCc
Q 007936 478 CNSAAKMANNLEVDALFVYTKT--------GHMASLLSRCRPDCPIFAFTST 521 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~s--------G~tA~~lSr~RP~~PIiavT~~ 521 (584)
+...++.|.+.++++||+-++. |+++..+.+.-| |||+.+-+.
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~ 148 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLR 148 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCC
Confidence 3445678888999999988762 677888877665 999988654
No 274
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=44.82 E-value=2.5e+02 Score=28.03 Aligned_cols=116 Identities=16% Similarity=0.009 Sum_probs=65.8
Q ss_pred CHhhhHHhHhcCCCEEE-EcCCCCHHHHHHHHHHHHhhc-CCCCceEEEee--cCHHHHhcHHHHHHh-CCEEEEeCCcc
Q 007936 285 DWLDIDFGITEGVDFIA-ISFVKSAEVINHLKSYIAARS-RDSDIAVIAKI--ESIDSLKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~-lSfV~saedV~~lr~~l~~~~-~~~~i~IiAKI--Et~~av~NldeIl~~-sDGImIaRGDL 359 (584)
+.+....+.+.|.-+++ .....+++++.+..+.++... ....+.++..- ..+.-.+.++.+++. +|+|.++-|+
T Consensus 28 ~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~- 106 (328)
T 2gjl_A 28 RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND- 106 (328)
T ss_dssp SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-
T ss_pred cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-
Confidence 45566666777764444 445566887765544443211 11123344320 022222345555555 7999987432
Q ss_pred cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCC
Q 007936 360 GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGES 427 (584)
Q Consensus 360 g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ET 427 (584)
| ..+++.+++.|.|++... .|. .+...+...|+|++.+.+=+
T Consensus 107 ----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i~v~g~~ 148 (328)
T 2gjl_A 107 ----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAVSIDGFE 148 (328)
T ss_dssp ----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEEEEECTT
T ss_pred ----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEEEEECCC
Confidence 2 356777888899988531 222 23456788999999996533
No 275
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=44.51 E-value=56 Score=33.15 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=61.5
Q ss_pred HhhhHHhHhcCCCEEEEcC------CCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-C-CEEEE
Q 007936 286 WLDIDFGITEGVDFIAISF------VKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-S-DGAMV 354 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSf------V~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-s-DGImI 354 (584)
.+.++|-++.|+|+|++.= --|.++=.++.+... +..+.++.||+-+ -|.++++.....-+. . ||+|+
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~-~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv 109 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQ-KVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLA 109 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHH-HHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH-HHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEE
Confidence 3456788899999988643 234445455544443 2334568999988 367777777777765 4 99999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
.+-.+.- ...+.+ .+..-..|.+.+.|+++-
T Consensus 110 ~~P~y~~-~s~~~l---~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 110 IVPYYNK-PSQEGM---YQHFKAIADASDLPIIIY 140 (311)
T ss_dssp ECCCSSC-CCHHHH---HHHHHHHHHSCSSCEEEE
T ss_pred cCCCCCC-CCHHHH---HHHHHHHHHhCCCCEEEE
Confidence 7654422 122233 334444445568999975
No 276
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=44.11 E-value=72 Score=34.02 Aligned_cols=124 Identities=10% Similarity=0.092 Sum_probs=74.2
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|++.|.++++- .|..+....+...-..|++.+....+. .| .++++...++..+.+.
T Consensus 188 ~AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~--- 249 (430)
T 4aec_A 188 IGLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPD--- 249 (430)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTT---
T ss_pred HHHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCC---
Confidence 34566799999998875 244444455566667899988775331 11 3444444433322111
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc--CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL--EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l--~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
.+..++.. .+..+.......+.|+.+++ ..++||+..-+|.+..-+++ ..|.+.||++.+..
T Consensus 250 ------~~~i~~~~--np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~ 317 (430)
T 4aec_A 250 ------AYMLQQFD--NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTE 317 (430)
T ss_dssp ------EEECCTTT--CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred ------cEEecCCC--CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 11112211 11111223344567777776 47899999999999877665 47999999997754
No 277
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=43.98 E-value=72 Score=30.29 Aligned_cols=54 Identities=20% Similarity=0.243 Sum_probs=41.4
Q ss_pred EEEeccc-chhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcC-------ceeCCCceeeec
Q 007936 209 TITVNYD-GFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDP-------GLLLPRANLTFW 265 (584)
Q Consensus 209 ~i~v~~~-~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~-------G~l~s~Kgvnf~ 265 (584)
.+.+..+ .+.++++.||.|-+|+ +.|.|.++.++.+.+.+ .. |.++....||..
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f~vdv-~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMVYFDI-DQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEEEEEE-CTTTTTSSGGGCCTTCEEEEE
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEEEEEh-HHhhhhCchhhcCCCCEEEEC
Confidence 4555443 4788999999999977 99999999999999888 32 455666677744
No 278
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=43.94 E-value=1.3e+02 Score=30.06 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=58.4
Q ss_pred HhhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEe
Q 007936 286 WLDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVA 355 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIa 355 (584)
.+.++|-++.|+|+|++ ++.-|.++=.++.+...+ ..+. ||+-+= |.++++.....-+. +||+|+-
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~-~~~g---viaGvg~~~t~~ai~la~~A~~~Gadavlv~ 98 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYD-VTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVGIASY 98 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHT-TCSC---EEEECCCSCHHHHHHHHHHGGGSCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH-HcCC---EEEecCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 34557888999999887 345566666666665532 2222 888873 46666655555544 7999987
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+-.+.-..+.+.+...-+. .|.+.+.|+++-
T Consensus 99 ~P~y~~~~s~~~l~~~f~~---va~a~~lPiilY 129 (293)
T 1w3i_A 99 APYYYPRMSEKHLVKYFKT---LCEVSPHPVYLY 129 (293)
T ss_dssp CCCSCSSCCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHH---HHhhCCCCEEEE
Confidence 6544220122333333333 455568999874
No 279
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=43.84 E-value=37 Score=34.92 Aligned_cols=63 Identities=11% Similarity=0.118 Sum_probs=42.6
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....+|.|....+++ ..+++.+.|.+.+.|++.|++.++-.++++.+|++ .|..+.|++|..
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~G~d~~l~vDan 199 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREH---LGDSFPLMVDAN 199 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHH---HCTTSCEEEECT
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 3445566553222454 45667789999999999998887777777777764 455566677753
No 280
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=43.73 E-value=57 Score=34.01 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=23.7
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
..|||...-+- --.|+..++..|||++++..
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 57888764322 24789999999999999963
No 281
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=43.63 E-value=31 Score=34.56 Aligned_cols=146 Identities=10% Similarity=0.084 Sum_probs=82.5
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--------C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--------S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--------s 349 (584)
|..|..|.+.+ +.+.+.|++.|+++ +..+..+++.|+ +..++|.+=|=.+.|-...+.-+.. +
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~----gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 125 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE----GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGA 125 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT----TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc----CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 34566666543 56788999999985 566788888883 3457887767555554333222211 4
Q ss_pred CEEEEeCCcccccCCC---CChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeec
Q 007936 350 DGAMVARGDLGAQIPL---EQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLS 424 (584)
Q Consensus 350 DGImIaRGDLg~ei~~---e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs 424 (584)
|.|=+ -+.++. .+...+.+.|-..+... |+|+=+ |||. ..-|..|+..... +...|+|.|=-|
T Consensus 126 dEIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKV---IlEt----~~Lt~eei~~A~~ia~eaGADfVKTS 193 (260)
T 3r12_A 126 DEIDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKV---IIET----CYLDTEEKIAACVISKLAGAHFVKTS 193 (260)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEE---ECCG----GGCCHHHHHHHHHHHHHTTCSEEECC
T ss_pred CEEEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEE---EEeC----CCCCHHHHHHHHHHHHHhCcCEEEcC
Confidence 54422 122222 24444554444443333 444322 3333 2336778777666 667899998766
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 007936 425 GESAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 425 ~ETa~G~yPveaV~~m~~I~ 444 (584)
.==..|---++.|+.|++.+
T Consensus 194 TGf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 194 TGFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHh
Confidence 11112234578899998875
No 282
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=43.63 E-value=34 Score=34.63 Aligned_cols=64 Identities=14% Similarity=0.084 Sum_probs=48.2
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH--HhcHHHHHHh-CCEEEEeC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS--LKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a--v~NldeIl~~-sDGImIaR 356 (584)
.+.++.+++.|+|+|.+-.. ++++++++++.++.. +.++ +||=--| .+|+.++.+. +|+|-+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~--~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSR--APTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHH--CTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhcc--CCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 57778889999999999884 789999999988531 2234 3443344 3688999988 99999986
No 283
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=43.61 E-value=1.7e+02 Score=29.88 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=67.9
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEcCC-------------CCH------------HHHHHHHHHHHhhcCCCC
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAISFV-------------KSA------------EVINHLKSYIAARSRDSD 326 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lSfV-------------~sa------------edV~~lr~~l~~~~~~~~ 326 (584)
.||..|++.+ +.+.+.|+|+|=+-.- +.. .-+.++.+.+++. . +
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~-v--~ 209 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV-W--D 209 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-C--C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh-c--C
Confidence 4677777666 4567889999877533 221 1233333334322 2 4
Q ss_pred ceEEEeecCHH------HHhcHHHHHHh-----CCEEEEeCCccccc-CCCCChHHHHHHHHHHH-HHcCCCeEEehhhh
Q 007936 327 IAVIAKIESID------SLKNLEEIILA-----SDGAMVARGDLGAQ-IPLEQVPSAQQKIVQLC-RQLNKPVIVASQLL 393 (584)
Q Consensus 327 i~IiAKIEt~~------av~NldeIl~~-----sDGImIaRGDLg~e-i~~e~V~~~Qk~II~~c-~~~gKPvivATqmL 393 (584)
..|..||---+ .+++..++++. +|.|-|--|.+.-. ++.. +..+-..++.. +..+.|||....
T Consensus 210 ~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~Gg-- 285 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGL-- 285 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESS--
T ss_pred CceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCC--
Confidence 67888884211 12333333333 79888864443221 1111 11222333333 345899987642
Q ss_pred HhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 394 ESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 394 eSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.-|. .+...++..| +|+|++.
T Consensus 286 -------I~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 286 -------ITSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp -------CCCH---HHHHHHHHTTSCSEEEEC
T ss_pred -------CCCH---HHHHHHHHCCCeeEEEec
Confidence 2222 3445678888 9999996
No 284
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=43.52 E-value=24 Score=37.63 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=51.9
Q ss_pred CCCCccCHhhhH-HhHhcCCCEEEEcCCCC---------------------H---HHHHHHHHHHHhhcCCCCceEEEe-
Q 007936 279 PTISPKDWLDID-FGITEGVDFIAISFVKS---------------------A---EVINHLKSYIAARSRDSDIAVIAK- 332 (584)
Q Consensus 279 p~lt~kD~~dI~-~al~~gvD~I~lSfV~s---------------------a---edV~~lr~~l~~~~~~~~i~IiAK- 332 (584)
|.+++.|..++. .+.+.|+|+|.++.--. + +-|.++++.+ +.++.||+-
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v-----~~~iPIIg~G 352 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT-----NKQIPIIASG 352 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHT-----TTCSCEEECS
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHh-----CCCCCEEEEC
Confidence 345655556554 45689999999996321 1 2333333333 345777763
Q ss_pred -ecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCC
Q 007936 333 -IESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNK 384 (584)
Q Consensus 333 -IEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gK 384 (584)
|.|.+-+ ++-|..=+|+|+|+|+=+.- |..-+..+.+.+-+...+.|.
T Consensus 353 GI~s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 353 GIFSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp SCCSHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 4443322 22222238999999985521 222334444455545555553
No 285
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=43.32 E-value=64 Score=32.99 Aligned_cols=68 Identities=25% Similarity=0.346 Sum_probs=48.7
Q ss_pred CCceEEEecC--CCCCC-----------HHHHHHHHHhcCCEEEEeCCC---CC-----HHHHHHHHHHHHHHHHHhCCc
Q 007936 105 RRTKLVCTIG--PATCG-----------FEQLEALAVGGMNVARINMCH---GT-----REWHRRVIERVRRLNEEKGFA 163 (584)
Q Consensus 105 r~tKIi~TiG--Pa~~~-----------~e~l~~li~~Gm~v~RiN~sH---g~-----~e~~~~~i~~ir~~~~e~~~~ 163 (584)
.+|+|++-|. |-|.+ .+..++|+++|+++.=||.-. |. .|++.+++.-|+.+.++.+
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-- 85 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-- 85 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC--
Confidence 6789998776 53332 345789999999999999943 32 3889999999888887754
Q ss_pred eEEEeecCCCe
Q 007936 164 VAIMMDTEGSE 174 (584)
Q Consensus 164 i~I~lDl~Gpk 174 (584)
+.|.+|+.=|+
T Consensus 86 vpiSIDT~~~~ 96 (314)
T 2vef_A 86 VLISIDTWKSQ 96 (314)
T ss_dssp CEEEEECSCHH
T ss_pred ceEEEeCCCHH
Confidence 56777987554
No 286
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=43.20 E-value=47 Score=33.99 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHhcCCEEEEeCCCCCH---------HHHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 117 TCGFEQLEALAVGGMNVARINMCHGTR---------EWHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 117 ~~~~e~l~~li~~Gm~v~RiN~sHg~~---------e~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
....+.++.|.+.|+|++||-++.... +...+.++.+=+...+. -+.+++|+-..
T Consensus 61 ~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~--Gi~vild~H~~ 124 (380)
T 1edg_A 61 KTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDN--KMYVILNTHHD 124 (380)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTT--TCEEEEECCSC
T ss_pred cccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEeCCCc
Confidence 356889999999999999998865321 22223333333333444 47789998753
No 287
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=42.95 E-value=1.8e+02 Score=27.37 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=63.6
Q ss_pred CHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEe-----------ecCHHHHhcHHHHHHh-CCE
Q 007936 285 DWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAK-----------IESIDSLKNLEEIILA-SDG 351 (584)
Q Consensus 285 D~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAK-----------IEt~~av~NldeIl~~-sDG 351 (584)
+...+ +.+.+.|+++|.+ ++++.++.+++.. +++++.- |+. -.+.+++.++. +|.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-------~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~ 104 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-------DLPIIGIIKKDYPPQEPFITA--TMTEVDQLAALNIAV 104 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-------CSCEEEECBCCCTTSCCCBSC--SHHHHHHHHTTTCSE
T ss_pred hHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-------CCCEEeeEcCCCCccccccCC--hHHHHHHHHHcCCCE
Confidence 44444 4556889999876 4788888877654 2444321 221 23345565555 898
Q ss_pred EEEeCCcccccCCC-CChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE--eecC
Q 007936 352 AMVARGDLGAQIPL-EQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL--MLSG 425 (584)
Q Consensus 352 ImIaRGDLg~ei~~-e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i--mLs~ 425 (584)
|.++-.-+.- |. +.+ .++++.+++. ++++++-. -|.. +...+...|+|.+ .+.+
T Consensus 105 V~l~~~~~~~--~~~~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~---ea~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 105 IAMDCTKRDR--HDGLDI----ASFIRQVKEKYPNQLLMADI-----------STFD---EGLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp EEEECCSSCC--TTCCCH----HHHHHHHHHHCTTCEEEEEC-----------SSHH---HHHHHHHTTCSEEECTTTT
T ss_pred EEEcccccCC--CCCccH----HHHHHHHHHhCCCCeEEEeC-----------CCHH---HHHHHHHcCCCEEeeeccc
Confidence 8776322110 10 122 4677777777 77777532 2222 3567788999999 5554
No 288
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=42.82 E-value=1.5e+02 Score=28.20 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=41.4
Q ss_pred cCHhhhHHhHhcCCCEEEEcCC-CCHHHH--HHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--CCEEEEe
Q 007936 284 KDWLDIDFGITEGVDFIAISFV-KSAEVI--NHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--SDGAMVA 355 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV-~saedV--~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--sDGImIa 355 (584)
.+.+|+..+.+.|+|+|.+-|. .|+..| .+++++.+ .....+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 10 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~--~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 10 TNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISV--ELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHH--HSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHH--hCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 3578999999999999999875 444433 44444442 122234444333232 24556666655 5888874
No 289
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=42.79 E-value=89 Score=30.25 Aligned_cols=102 Identities=18% Similarity=0.109 Sum_probs=56.3
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCC---CCCChHHHHHHHHHHHHHHhhhhhhhhhhhc
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESA---MGQFPDKALTVLRSVSLRIEKWWREEKRHEA 459 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa---~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~ 459 (584)
|.++.++|-. +--....++..-+.++..|+.+|||.|-.----. .|+| -+..+-+..+...+..+.. +
T Consensus 52 ~~~v~v~~vi--gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~~l------k 122 (220)
T 1ub3_A 52 HAPFRLVTVV--GFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQAVL------K 122 (220)
T ss_dssp TCSSEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTSEE------E
T ss_pred CCCceEEEEe--cCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCCCc------e
Confidence 4455555542 2222334555567999999999999985532111 2333 5566667777666654211 0
Q ss_pred ccCCCCCCCCCcChHHHHHHHHHHHHhhcCCcEEEEccCCch
Q 007936 460 MELPDVGSSFAESISEEICNSAAKMANNLEVDALFVYTKTGH 501 (584)
Q Consensus 460 ~~~~~~~~~~~~~~~~~ia~sav~~A~~l~a~aIvv~T~sG~ 501 (584)
+-++. ... + +.-...|+++|.+.+|+.| =|.+|.
T Consensus 123 vIlet---~~l-~--~e~i~~a~~ia~eaGADfV--KTsTGf 156 (220)
T 1ub3_A 123 VILET---GYF-S--PEEIARLAEAAIRGGADFL--KTSTGF 156 (220)
T ss_dssp EECCG---GGS-C--HHHHHHHHHHHHHHTCSEE--ECCCSS
T ss_pred EEEec---CCC-C--HHHHHHHHHHHHHhCCCEE--EeCCCC
Confidence 00110 001 2 2335568899999999954 444444
No 290
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=42.78 E-value=46 Score=34.61 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhhcCCCCceEEEe-ecCHHHHhcHHHHHHh-CCEEEEeC-CcccccCCCCChHHHHHHHHHHHHHcC
Q 007936 307 SAEVINHLKSYIAARSRDSDIAVIAK-IESIDSLKNLEEIILA-SDGAMVAR-GDLGAQIPLEQVPSAQQKIVQLCRQLN 383 (584)
Q Consensus 307 saedV~~lr~~l~~~~~~~~i~IiAK-IEt~~av~NldeIl~~-sDGImIaR-GDLg~ei~~e~V~~~Qk~II~~c~~~g 383 (584)
+.++|+.+|+.. +.+|+.| +-++ +......+. +|+|.|.- |-=..+.+...+ ..-.++.+.+. ..
T Consensus 217 ~~~~i~~lr~~~-------~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~ 284 (368)
T 2nli_A 217 SPRDIEEIAGHS-------GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KR 284 (368)
T ss_dssp CHHHHHHHHHHS-------SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TS
T ss_pred hHHHHHHHHHHc-------CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CC
Confidence 355666666644 2567777 2222 222222333 79998841 100011222222 12222222221 15
Q ss_pred CCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 384 KPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 384 KPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
+|||...-+ - .-.|+..++..|||++|+..
T Consensus 285 ipVia~GGI---------~---~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 285 VPIVFDSGV---------R---RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp SCEEECSSC---------C---SHHHHHHHHHTTCSEEEECH
T ss_pred CeEEEECCC---------C---CHHHHHHHHHcCCCEEEECH
Confidence 899876432 2 34688999999999999974
No 291
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=42.77 E-value=88 Score=31.38 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=51.6
Q ss_pred CCEEEEe-CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH-HHHHcccceEeecCC
Q 007936 349 SDGAMVA-RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS-EAVRQRADALMLSGE 426 (584)
Q Consensus 349 sDGImIa-RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~-nav~~G~D~imLs~E 426 (584)
+||+++. ---=+..+..++-..+.+..++.++....|||+-| ...+-.|..+.+ .|-..|+|++|+..=
T Consensus 42 v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 42 IDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp CCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 7999874 11111223333333333344444433257888764 244455655544 477789999999744
Q ss_pred CCCCCChHHHHHHHHHHHHHHh
Q 007936 427 SAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I~~~aE 448 (584)
--...-+.+.++..+.|+..+.
T Consensus 113 ~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 113 YYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHhCC
Confidence 3333335677888888877664
No 292
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=42.75 E-value=2.7e+02 Score=27.87 Aligned_cols=131 Identities=15% Similarity=0.215 Sum_probs=79.3
Q ss_pred cCCCEEEEcCC-------CCHHHHHHHHHHHHhhcCCCCceEEE-eecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCC
Q 007936 295 EGVDFIAISFV-------KSAEVINHLKSYIAARSRDSDIAVIA-KIESIDSLKNLEEIILASDGAMVARGDLGAQIPLE 366 (584)
Q Consensus 295 ~gvD~I~lSfV-------~saedV~~lr~~l~~~~~~~~i~IiA-KIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e 366 (584)
.|-|||=+--+ .+.....+.-+.+. .....++. -..++.--+.+++. -+|.+|.-....|.-.|+.
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~----~~Gf~Vlpy~~dd~~~akrl~~~--G~~aVmPlg~pIGsG~Gi~ 174 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLV----KDGFDVMVYTSDDPIIARQLAEI--GCIAVMPLAGLIGSGLGIC 174 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHH----TTTCEEEEEECSCHHHHHHHHHS--CCSEEEECSSSTTCCCCCS
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHH----HCCCEEEEEeCCCHHHHHHHHHh--CCCEEEeCCccCCCCCCcC
Confidence 47888888777 33333333333331 23356664 55554444333332 2788887333445555555
Q ss_pred ChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHH
Q 007936 367 QVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLR 446 (584)
Q Consensus 367 ~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~ 446 (584)
. +...+.|++ ..+.|||++- ..-|. +|++.++..|+|++++..=-+.++.|.+-.+.|..-++.
T Consensus 175 ~-~~lI~~I~e---~~~vPVI~eG---------GI~TP---sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~a 238 (265)
T 1wv2_A 175 N-PYNLRIILE---EAKVPVLVDA---------GVGTA---SDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVA 238 (265)
T ss_dssp C-HHHHHHHHH---HCSSCBEEES---------CCCSH---HHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHh---cCCCCEEEeC---------CCCCH---HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHH
Confidence 5 344455544 4689999863 23333 477999999999999986656688998887777665544
Q ss_pred H
Q 007936 447 I 447 (584)
Q Consensus 447 a 447 (584)
-
T Consensus 239 G 239 (265)
T 1wv2_A 239 G 239 (265)
T ss_dssp H
T ss_pred H
Confidence 3
No 293
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=42.70 E-value=2.2e+02 Score=26.86 Aligned_cols=98 Identities=16% Similarity=0.226 Sum_probs=52.3
Q ss_pred CceEEEeec-CH---HH-HhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcC
Q 007936 326 DIAVIAKIE-SI---DS-LKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEY 399 (584)
Q Consensus 326 ~i~IiAKIE-t~---~a-v~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~ 399 (584)
++.|..+.- ++ .+ .+.++..+++ +|+|.++ |+.. ++ -+.+++.|+++|..++++- +
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~~i--------~ 141 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVFLA--------A 141 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEEEE--------C
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEEEE--------C
Confidence 356777663 22 11 2344555555 8999994 5533 33 3578899999999888742 1
Q ss_pred CCCChhhHHHHHHHHHcccceEeecCCC--CCCC---ChHHHHHHHHHHHH
Q 007936 400 PTPTRAEVADVSEAVRQRADALMLSGES--AMGQ---FPDKALTVLRSVSL 445 (584)
Q Consensus 400 p~PTrAEv~Dv~nav~~G~D~imLs~ET--a~G~---yPveaV~~m~~I~~ 445 (584)
|. |..| ...++..++|+++....+ ..|. ++...++.++++..
T Consensus 142 ~~-t~~e---~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~ 188 (248)
T 1geq_A 142 PN-TPDE---RLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKR 188 (248)
T ss_dssp TT-CCHH---HHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHH
T ss_pred CC-CHHH---HHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHh
Confidence 11 2222 244555667743321111 1122 55666677666653
No 294
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=42.33 E-value=23 Score=39.18 Aligned_cols=50 Identities=18% Similarity=0.316 Sum_probs=41.0
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 107 TKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 107 tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
-.+=+.+|-.-.+.|-.+.|+++|+|++=|+.+||..+...++++.||+.
T Consensus 270 L~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 270 LYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp BCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 34556677554567889999999999999999999999888888888863
No 295
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=42.27 E-value=86 Score=32.34 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=59.1
Q ss_pred hhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEEeec---CHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIAKIE---SIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiAKIE---t~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++ .+.-|.++-.++.+. . .+.++.||+-+= |.++++.....-+. +||+|+-+
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~---~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-L---VKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-H---HHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-H---hCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3446788999999887 355566665555555 2 124588999884 46777766666555 89999976
Q ss_pred CcccccCCCCChHHHHHHHHHHHH-HcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCR-QLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~-~~gKPvivA 389 (584)
-.+.--...+.+...-+. .|. +.+.|+++-
T Consensus 127 P~y~~~~s~~~l~~~f~~---IA~aa~~lPiilY 157 (344)
T 2hmc_A 127 RVLSRGSVIAAQKAHFKA---ILSAAPEIPAVIY 157 (344)
T ss_dssp CCSSSTTCHHHHHHHHHH---HHHHSTTSCEEEE
T ss_pred CccCCCCCHHHHHHHHHH---HHhhCCCCcEEEE
Confidence 544220122333333333 344 457898874
No 296
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=42.16 E-value=64 Score=31.94 Aligned_cols=102 Identities=19% Similarity=0.144 Sum_probs=59.7
Q ss_pred CHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee---cC--------HHHHhcHHHHHHhCCEE
Q 007936 285 DWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI---ES--------IDSLKNLEEIILASDGA 352 (584)
Q Consensus 285 D~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI---Et--------~~av~NldeIl~~sDGI 352 (584)
|.++ ++.+-+.|++.++++-+ +.++...+.++.+ ..+ ++...+-| +. .+.++.|++.+...+.-
T Consensus 28 d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~--~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (301)
T 2xio_A 28 DLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQ--TNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGK 103 (301)
T ss_dssp CHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHT--TCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTT
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHH--HCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCC
Confidence 4443 45677899999888754 6788888877763 222 22222222 11 13355555555443212
Q ss_pred EEeCCcccccCCC-C-ChHHHHH----HHHHHHHHcCCCeEEeh
Q 007936 353 MVARGDLGAQIPL-E-QVPSAQQ----KIVQLCRQLNKPVIVAS 390 (584)
Q Consensus 353 mIaRGDLg~ei~~-e-~V~~~Qk----~II~~c~~~gKPvivAT 390 (584)
.+|=|..|++... . .-...|+ ..++.|++.|+||++.|
T Consensus 104 ~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 104 VVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred eEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 3344667776633 1 2235554 56789999999999986
No 297
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=42.13 E-value=75 Score=33.82 Aligned_cols=127 Identities=15% Similarity=0.172 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|+..|.++++- .|.......+...-..|++.+....+...+ .+..+++...++..+...
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~---- 238 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPN---- 238 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTT----
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCC----
Confidence 4667889999998875 233333334555566799987765432111 111233333333322111
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
.+..++... +..+.......+.|+.++++ .++||+.+-+|.++.-+++ ..|.+.||++.+...
T Consensus 239 -----~~~i~q~~n--~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 239 -----SHILDQYRN--ASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp -----EECCCTTTC--THHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred -----eEEeCccCC--cccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 111121111 11111222334677777763 7999999999999877665 469999999988644
No 298
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=42.09 E-value=56 Score=33.59 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=34.9
Q ss_pred HHHHHHHhcCCEEEEeCCCC------CHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMCHG------TREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.++|.+.+.|++.|+ ..++-.++++.+|++ .|..+.|++|..
T Consensus 156 ~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a---~g~d~~l~vDan 208 (382)
T 1rvk_A 156 FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREA---VGPDIRLMIDAF 208 (382)
T ss_dssp HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHH---HCTTSEEEEECC
T ss_pred HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 45677889999999999997 666666666666654 455677777764
No 299
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=42.02 E-value=1.4e+02 Score=28.95 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=60.6
Q ss_pred hHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCE-EEEeC-Cc-ccccCCCCCh
Q 007936 292 GITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDG-AMVAR-GD-LGAQIPLEQV 368 (584)
Q Consensus 292 al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDG-ImIaR-GD-Lg~ei~~e~V 368 (584)
+.+.|+|+|.++-.. .+++.++.+.++. .+ +..+.-+-.....+.+.++.+..+| +.+.. .. -|..-+..
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~--~g--~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~-- 186 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKN--NN--LELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN-- 186 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHH--TT--CEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHH--cC--CceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--
Confidence 789999999987543 3456666666642 23 2333333232334566777777664 44432 11 12211221
Q ss_pred HHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 369 PSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 369 ~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
+...+.+-+..+..+.|+++.. ..=|. .++..+...|+|++...
T Consensus 187 ~~~~~~i~~v~~~~~~pI~vgG---------GI~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 187 PRVESLIQEVKKVTNKPVAVGF---------GISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp THHHHHHHHHHHHCSSCEEEES---------CCCSH---HHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHhhcCCeEEEEC---------CcCCH---HHHHHHHHcCCCEEEEC
Confidence 2222333333334478998763 22223 34455667799999874
No 300
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=42.01 E-value=24 Score=34.34 Aligned_cols=58 Identities=14% Similarity=0.093 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHH
Q 007936 372 QQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSL 445 (584)
Q Consensus 372 Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~ 445 (584)
-...++.++++|++|.+.|- . +.+ -+..++..++..|+|+|+- .||..+.+++.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv--~-----~~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP--W-----IFD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC--T-----TCC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC--C-----CCC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36789999999999999982 0 011 1234556677889999875 689999998887774
No 301
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=41.99 E-value=80 Score=36.16 Aligned_cols=103 Identities=16% Similarity=0.180 Sum_probs=72.8
Q ss_pred CccCHhhhHHhHhcCCCEEEE-------------------cCCCCH--HHHHHHHHHHHhhcCCCCceEEEeecCHHHHh
Q 007936 282 SPKDWLDIDFGITEGVDFIAI-------------------SFVKSA--EVINHLKSYIAARSRDSDIAVIAKIESIDSLK 340 (584)
Q Consensus 282 t~kD~~dI~~al~~gvD~I~l-------------------SfV~sa--edV~~lr~~l~~~~~~~~i~IiAKIEt~~av~ 340 (584)
++.-+.-|+||.++|.++|.+ +|++-- -|+.+|.+|.+. +.+.||.--|+..++.
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~s----KGV~iilw~~t~~~~~ 445 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAAR----KGIKMMMHHETSASVR 445 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHH----TTCEEEEEEECTTBHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHh----CCCEEEEEEcCCCchh
Confidence 455688899999999999999 222221 248999998853 3489999999988544
Q ss_pred c----HHHHHHh-----CCEEEEeC-CcccccCCC----CChHHHHHHHHHHHHHcCCCeEEe
Q 007936 341 N----LEEIILA-----SDGAMVAR-GDLGAQIPL----EQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 341 N----ldeIl~~-----sDGImIaR-GDLg~ei~~----e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
| +|+.++. ..||-++= ||+ ++-+- ..+.....+|++.|.+++.-|.+.
T Consensus 446 n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 446 NYERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred hHHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 4 5556655 67888752 121 11111 347778889999999999988876
No 302
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=41.98 E-value=1.9e+02 Score=28.87 Aligned_cols=128 Identities=16% Similarity=0.207 Sum_probs=0.0
Q ss_pred CCccCHhhhHHhHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecC------HHHHh
Q 007936 281 ISPKDWLDIDFGITEGVDFIAIS--------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIES------IDSLK 340 (584)
Q Consensus 281 lt~kD~~dI~~al~~gvD~I~lS--------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt------~~av~ 340 (584)
+|.+|..--+.+-+.|+|.|.+. .|.-.+-+...+... ..-....|++=++- .++++
T Consensus 22 ~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~---r~~~~~~vvaD~pfgsy~~~~~a~~ 98 (264)
T 1m3u_A 22 ITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVR---RGAPNCLLLADLPFMAYATPEQAFE 98 (264)
T ss_dssp EECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHH---HHCTTSEEEEECCTTSSSSHHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHH---hhCCCCcEEEECCCCCcCCHHHHHH
Q ss_pred cHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE----EehhhhHhh----hcCCCCChhh--HHH
Q 007936 341 NLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI----VASQLLESM----IEYPTPTRAE--VAD 409 (584)
Q Consensus 341 NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi----vATqmLeSM----i~~p~PTrAE--v~D 409 (584)
|...+++. +++|-+-=| ..+...|+++.++|.||+ +--|-...+ +..-...+++ +.|
T Consensus 99 ~a~rl~kaGa~aVklEgg------------~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~r 166 (264)
T 1m3u_A 99 NAATVMRAGANMVKIEGG------------EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSD 166 (264)
T ss_dssp HHHHHHHTTCSEEECCCS------------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCc------------HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHH
Q ss_pred HHHHHHcccceEee
Q 007936 410 VSEAVRQRADALML 423 (584)
Q Consensus 410 v~nav~~G~D~imL 423 (584)
..-....|+|+++|
T Consensus 167 A~a~~eAGA~~ivl 180 (264)
T 1m3u_A 167 ALALEAAGAQLLVL 180 (264)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHCCCcEEEE
No 303
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=41.52 E-value=11 Score=39.52 Aligned_cols=36 Identities=25% Similarity=0.356 Sum_probs=31.7
Q ss_pred hhcCCcEEEEccCCchHHHHHhcc----CCCCcEEEEcCc
Q 007936 486 NNLEVDALFVYTKTGHMASLLSRC----RPDCPIFAFTST 521 (584)
Q Consensus 486 ~~l~a~aIvv~T~sG~tA~~lSr~----RP~~PIiavT~~ 521 (584)
.+..||.++|-|.||+||-.+|.- .|..+.+.+||=
T Consensus 243 ~~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltPI 282 (365)
T 3pfn_A 243 TTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPI 282 (365)
T ss_dssp EEECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEEE
T ss_pred EEEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEEEec
Confidence 456899999999999999999965 888999998874
No 304
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=41.30 E-value=36 Score=28.95 Aligned_cols=40 Identities=15% Similarity=0.337 Sum_probs=31.1
Q ss_pred HHHHHH-HHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAK-MANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~-~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiav 518 (584)
+...++ .|.+.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 96 ~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 96 KHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 445567 788899999999775 4678888887766 999876
No 305
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=41.29 E-value=1.4e+02 Score=29.62 Aligned_cols=123 Identities=11% Similarity=0.124 Sum_probs=71.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|+..|.++++- .|.......+...-..|++.+...++. .| .++.+...++..+-. +
T Consensus 81 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~-~--- 141 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLT-----------MPETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQ-R--- 141 (313)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCT-T---
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCC-C---
Confidence 3667889999998875 232222234455556799987776431 12 345444333332211 0
Q ss_pred hhhhhcccCCCCCCCCCcChHHH-HHHHHHHHHhhc--CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEE-ICNSAAKMANNL--EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~-ia~sav~~A~~l--~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
.+..++.. .+..+ .. ....+.|+.+++ +.+.||+.+-+|.++.-+++ ..|.+.|+++.+...
T Consensus 142 -----~~~~~~~~--n~~~~-~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 142 -----YFVPQQFE--NPANP-AIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp -----EECCCTTT--CTHHH-HHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred -----EEeCCCCC--ChhhH-HHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 01111111 11111 11 334467777777 37999999999999877665 469999999987643
No 306
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=41.25 E-value=3.2e+02 Score=28.22 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=64.7
Q ss_pred CCCccCHhhh--------HHhHhcCCCEEEEcCC-------------CC----------------HHHHHHHHHHHHhhc
Q 007936 280 TISPKDWLDI--------DFGITEGVDFIAISFV-------------KS----------------AEVINHLKSYIAARS 322 (584)
Q Consensus 280 ~lt~kD~~dI--------~~al~~gvD~I~lSfV-------------~s----------------aedV~~lr~~l~~~~ 322 (584)
.||..|++.+ +.+.+.|+|+|=+-.- +. .|-|+.+|+.+
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---- 225 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---- 225 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc----
Confidence 4688888777 4567899999987543 22 12333344333
Q ss_pred CCCCceEEEeecCHH---H------HhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHHHH-HHcCCCeE
Q 007936 323 RDSDIAVIAKIESID---S------LKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQLC-RQLNKPVI 387 (584)
Q Consensus 323 ~~~~i~IiAKIEt~~---a------v~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c-~~~gKPvi 387 (584)
+.+ .|..||=--+ + +++..++++. +|.|=+..|..+ .+ .++.. +..++|||
T Consensus 226 -g~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~--------~~~~ik~~~~iPvi 291 (361)
T 3gka_A 226 -SAA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG----DA--------IGQQLKAAFGGPFI 291 (361)
T ss_dssp -CGG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST----TC--------CHHHHHHHHCSCEE
T ss_pred -CCC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC----HH--------HHHHHHHHcCCCEE
Confidence 444 6788883211 1 2233333332 688887766522 11 12222 23478988
Q ss_pred EehhhhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 388 VASQLLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 388 vATqmLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
.... . |.. +...++..| +|+|++.
T Consensus 292 ~~Gg---------i-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 292 VNEN---------F-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp EESS---------C-CHH---HHHHHHHTTSCSEEEES
T ss_pred EeCC---------C-CHH---HHHHHHHcCCccEEEEC
Confidence 7632 2 433 345567777 9999986
No 307
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=41.02 E-value=2.6e+02 Score=27.22 Aligned_cols=131 Identities=11% Similarity=0.106 Sum_probs=72.2
Q ss_pred HhhhHHhHhcCCCEEEEcCC-CCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccC
Q 007936 286 WLDIDFGITEGVDFIAISFV-KSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQI 363 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV-~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei 363 (584)
..++..+.+.|+|+|.+--. -+ ++++++.+..+ ..| +..+.-+.+.+- ++..++. .|.|-+..-||. .+
T Consensus 118 ~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~--~lG--l~~lvev~~~~E---~~~a~~~gad~IGvn~~~l~-~~ 188 (254)
T 1vc4_A 118 PFMLEEARAFGASAALLIVALLG-ELTGAYLEEAR--RLG--LEALVEVHTERE---LEIALEAGAEVLGINNRDLA-TL 188 (254)
T ss_dssp HHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHH--HHT--CEEEEEECSHHH---HHHHHHHTCSEEEEESBCTT-TC
T ss_pred HHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHH--HCC--CeEEEEECCHHH---HHHHHHcCCCEEEEccccCc-CC
Confidence 34677899999999887422 11 44555444332 223 344444444432 2233332 688888776654 22
Q ss_pred CCCChHHHHHHHHHHHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHH
Q 007936 364 PLEQVPSAQQKIVQLCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVL 440 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m 440 (584)
+. .+ ..-+++....... ++|++-. ...-|.+ |+..... |+|+++...---.+..|.++++-|
T Consensus 189 ~~-dl-~~~~~L~~~i~~~~~~~~vIAe---------gGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 189 HI-NL-ETAPRLGRLARKRGFGGVLVAE---------SGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp CB-CT-THHHHHHHHHHHTTCCSEEEEE---------SCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CC-CH-HHHHHHHHhCccccCCCeEEEE---------cCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 22 11 1122334444333 5676643 3444444 5566667 999999875555677788877654
No 308
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=41.01 E-value=91 Score=30.95 Aligned_cols=123 Identities=9% Similarity=0.063 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++.+- .|.......+...-..|++.+...++ |. ..++.+...++..+.+.
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~---- 135 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEG---- 135 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSC----
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCC----
Confidence 4667889999998875 23333233445566679998777642 11 23444433333221111
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
.+ ..+.. .+..+.......+.++.++++ .++||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 136 -----~~-~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 136 -----KL-LDQFN--NPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp -----EE-CCTTT--CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred -----cc-cCCcC--ChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 01 11111 111111122344677777774 7999999999999876664 469999999988644
No 309
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=40.91 E-value=51 Score=34.86 Aligned_cols=56 Identities=13% Similarity=0.306 Sum_probs=39.5
Q ss_pred CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc-cc-ceEeec
Q 007936 349 SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ-RA-DALMLS 424 (584)
Q Consensus 349 sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~-G~-D~imLs 424 (584)
+|.+=||-+|+. .+ .+++.+.+.|||||+.|-| -|-+|+...++++.. |. +.++|=
T Consensus 135 vd~~KIgS~~~~------N~-----pLL~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 135 PSAFKIASYEIN------HL-----PLLKYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp CSCEEECGGGTT------CH-----HHHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCEEEECccccc------CH-----HHHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 577788877763 22 2466677789999999864 367899888888774 65 555553
No 310
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=40.73 E-value=70 Score=31.85 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=63.6
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCC-
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPL- 365 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~- 365 (584)
..++.+.+.|+|+++++=+-. +++.++++.++..+ +..+.-+--....+.+++|.+.+.|.+..-.=.|+ .|.
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g----l~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~ 183 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG----LETVFLLAPTSTDARIATVVRHATGFVYAVSVTGV-TGMR 183 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT----CEEECEECTTCCHHHHHHHHTTCCSCEEEECC--------
T ss_pred HHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC----CceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcc-cCCC
Confidence 345667788999999987654 66777777775332 22333332223345788888887654432110100 111
Q ss_pred CChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 366 EQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 366 e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
..++.-....++..+++ +.|+++.. ..=|.+.+ ..+ .|+|+++..
T Consensus 184 ~~~~~~~~~~v~~vr~~~~~Pv~vGf---------GI~t~e~a---~~~--~~ADgVIVG 229 (271)
T 1ujp_A 184 ERLPEEVKDLVRRIKARTALPVAVGF---------GVSGKATA---AQA--AVADGVVVG 229 (271)
T ss_dssp -----CCHHHHHHHHTTCCSCEEEES---------CCCSHHHH---HHH--TTSSEEEEC
T ss_pred CCCCccHHHHHHHHHhhcCCCEEEEc---------CCCCHHHH---HHh--cCCCEEEEC
Confidence 11111123445555555 78998863 33344433 333 899999975
No 311
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=40.67 E-value=38 Score=28.66 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhcCCcEEEEccC--------CchHHHHHhccCCCCcEEEE
Q 007936 477 ICNSAAKMANNLEVDALFVYTK--------TGHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 477 ia~sav~~A~~l~a~aIvv~T~--------sG~tA~~lSr~RP~~PIiav 518 (584)
.+...++.|.+.+++.||+-++ -|+++..+.+.- .|||+.+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~-~~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHA-ECSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHC-SSEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhC-CCCEEEe
Confidence 3445577888999999999886 366777777754 4999875
No 312
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=40.64 E-value=50 Score=33.78 Aligned_cols=47 Identities=11% Similarity=0.073 Sum_probs=35.0
Q ss_pred HHHHHHH-hcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAV-GGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~-~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++++ +|.+.+.|++.|++.++-.+.++.+|++ .|..+.|++|..
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 196 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKA---VGDRASVRVDVN 196 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHH---HGGGCEEEEECT
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHh---cCCCCEEEEECC
Confidence 3466777 9999999999999887777777777764 343466777753
No 313
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=40.59 E-value=60 Score=33.23 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhcCCEEEEeCCCCC----------HHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 118 CGFEQLEALAVGGMNVARINMCHGT----------REWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 118 ~~~e~l~~li~~Gm~v~RiN~sHg~----------~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
.+.+.++.|.+.|+|++||-++... .+...+.++.+=+...+. -+.+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~--Gi~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKN--GAFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTT--TCEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHC--CCEEEEECCC
Confidence 4689999999999999999886431 012223333333333343 4778899864
No 314
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=40.49 E-value=1.2e+02 Score=28.77 Aligned_cols=100 Identities=20% Similarity=0.253 Sum_probs=55.6
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee------c-CHHHHhcHHHHHHhC-CEEEEeCCc
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI------E-SIDSLKNLEEIILAS-DGAMVARGD 358 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI------E-t~~av~NldeIl~~s-DGImIaRGD 358 (584)
+.++.+.+.|++.+++.- .+.++...+.++.+. .. ++....-+ + +.+.++.|++.+... +. .+|=|.
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~--~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~-~~~iGE 97 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAEN--YQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAK-VVAVGE 97 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHH--CT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSS-EEEEEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHh--CC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCC-EEEEEE
Confidence 445677889999876653 345677777766532 12 22222222 1 224455565555431 22 223356
Q ss_pred ccccCCCC-ChHHHHH----HHHHHHHHcCCCeEEehh
Q 007936 359 LGAQIPLE-QVPSAQQ----KIVQLCRQLNKPVIVASQ 391 (584)
Q Consensus 359 Lg~ei~~e-~V~~~Qk----~II~~c~~~gKPvivATq 391 (584)
.|.+.... .-...|+ ..++.|.+.|+||++.|.
T Consensus 98 iGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 66665332 1234454 466779999999999863
No 315
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=40.35 E-value=70 Score=31.82 Aligned_cols=124 Identities=10% Similarity=0.104 Sum_probs=68.4
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|+..|.++.+- .|.......+...-..|++.+...++. .| .++++...++..+-..
T Consensus 78 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~--- 139 (308)
T 2egu_A 78 IGLAMVAAAKGYKAVLV-----------MPDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY--- 139 (308)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC---
Confidence 35677899999998875 222222234455566799987776432 12 3555554444332211
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
+...+.. .+..+.......+.|+.++++ .+.||+.+-+|.++.-+++ ..|.+.|+++.+...
T Consensus 140 -------~~~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 140 -------FMPQQFK--NEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp -------BCC----------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred -------CcCCcCC--ChhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 1111111 111111112333455665553 7999999999999876664 469999999988644
No 316
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=40.34 E-value=2.7e+02 Score=28.46 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=77.6
Q ss_pred HHHHHHHcccceEe--ecCCCCCC-CChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCc-ChHHHHHHHHHHH
Q 007936 409 DVSEAVRQRADALM--LSGESAMG-QFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAE-SISEEICNSAAKM 484 (584)
Q Consensus 409 Dv~nav~~G~D~im--Ls~ETa~G-~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ia~sav~~ 484 (584)
+|-.|+..|+|++- +.-- .| .|=.+.++.+.+++.++++|-.-. .-+.+.+........+ .-.+ +...|+++
T Consensus 133 sVe~AvrlGADaV~~l~~i~--~Gs~~e~~~l~~la~vv~ea~~~GlP~-~~ep~~y~r~gg~v~~~~dp~-~Va~aaRi 208 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRIN--LSDAGTAPTLEATAHAVNEAAAAQLPI-MLEPFMSNWVNGKVVNDLSTD-AVIQSVAI 208 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEEC--TTCTTHHHHHHHHHHHHHHHHHTTCCE-EEEEEEEEEETTEEEECCSHH-HHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEEC--CCChhHHHHHHHHHHHHHHHHHcCCcE-EEEeeccccCCCCcCCCCCHH-HHHHHHHH
Confidence 88999999999955 3211 22 455788888888888888752100 0010000000011111 2234 44556788
Q ss_pred HhhcCCc----EEEE-ccCCchHHHHHhccCCCCcEEEEcCc-----hhhhcccc--cc-cccEEEEec---C---CCCH
Q 007936 485 ANNLEVD----ALFV-YTKTGHMASLLSRCRPDCPIFAFTST-----TSVRRRLN--LR-WGLIPFRLS---F---SDDM 545 (584)
Q Consensus 485 A~~l~a~----aIvv-~T~sG~tA~~lSr~RP~~PIiavT~~-----~~~aR~l~--l~-~GV~P~~~~---~---~~d~ 545 (584)
|.+++|+ .|=+ || ...++-++-+ | +||+..--. ..+.+++. +. -|..-+.+. | ..|.
T Consensus 209 AaELGADs~~tivK~~y~--e~f~~Vv~a~-~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp 284 (307)
T 3fok_A 209 AAGLGNDSSYTWMKLPVV--EEMERVMEST-T-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDV 284 (307)
T ss_dssp HHTCSSCCSSEEEEEECC--TTHHHHGGGC-S-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCH
T ss_pred HHHhCCCcCCCEEEeCCc--HHHHHHHHhC-C-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCH
Confidence 9999999 7643 44 4556666655 3 788776432 33333332 44 477777653 2 3577
Q ss_pred HHHHHHHHHHH
Q 007936 546 ESNLNRTFSLL 556 (584)
Q Consensus 546 ~~~i~~~~~~~ 556 (584)
..+++......
T Consensus 285 ~~~v~al~~iV 295 (307)
T 3fok_A 285 AAAVDTAARLV 295 (307)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77766655443
No 317
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=40.32 E-value=46 Score=35.10 Aligned_cols=65 Identities=20% Similarity=0.236 Sum_probs=43.5
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCC---HHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGT---REWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~---~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+...-+|.... .++| ..+++.+.|.+.+.|++.||. ....++-++.++.+.+..|..+.|++|..
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 45566664322 2454 455667789999999999973 23345566666666677777788888864
No 318
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=40.26 E-value=78 Score=31.84 Aligned_cols=69 Identities=17% Similarity=0.230 Sum_probs=51.4
Q ss_pred CCceEEEecCCCCC---------C----HHHHHHHHHhcCCEEEEeC-CC--C-----CHHHHHHHHHHHHHHHHHhCCc
Q 007936 105 RRTKLVCTIGPATC---------G----FEQLEALAVGGMNVARINM-CH--G-----TREWHRRVIERVRRLNEEKGFA 163 (584)
Q Consensus 105 r~tKIi~TiGPa~~---------~----~e~l~~li~~Gm~v~RiN~-sH--g-----~~e~~~~~i~~ir~~~~e~~~~ 163 (584)
.+++|++=|.+.-. + .+..++|+++|+++.=||. |- | ..|+..+++.-++.+.++.+
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~-- 90 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE-- 90 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC--
Confidence 36789988875331 2 3356889999999999999 42 2 16889899999999887764
Q ss_pred eEEEeecCCCeE
Q 007936 164 VAIMMDTEGSEI 175 (584)
Q Consensus 164 i~I~lDl~GpkI 175 (584)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 566779987654
No 319
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=40.25 E-value=58 Score=33.29 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=35.1
Q ss_pred HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.+.|.+.+.+++.|++.++-.+.++.+|++ .|..+.|++|..
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g~~~~l~vDan 193 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VGSAVKLRLDAN 193 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 35667789999999999998877777777777764 455566777753
No 320
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=40.11 E-value=35 Score=36.61 Aligned_cols=49 Identities=20% Similarity=0.334 Sum_probs=38.8
Q ss_pred eEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 108 KLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 108 KIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
.+.+-+|+.....+.++.++++|++++=++++||..+...+.++.+|+.
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 3444567655568899999999999999999999887777777777754
No 321
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=40.09 E-value=85 Score=32.37 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=35.6
Q ss_pred HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.++|.+.+.+...|++.++-.+.++.+|++ .|..+.|++|..
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---~G~d~~l~vDan 192 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHT---AGSSITMILDAN 192 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---hCCCCEEEEECC
Confidence 45667788999999999998877777777777764 455677777764
No 322
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=39.92 E-value=69 Score=27.22 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=40.2
Q ss_pred CCCeEEEeecCCCCceEee-CCCEEEEeecccCCCCCCCEEEecccchh-cccCCCCEEEE
Q 007936 171 EGSEIHMGDLSGPPSARAE-DGEIWTFTVRAFDSPRPERTITVNYDGFA-EDVKVGDELLV 229 (584)
Q Consensus 171 ~GpkIR~G~~~~~~~i~l~-~G~~v~~t~~~~~~~~~~~~i~v~~~~~~-~~v~vGd~I~i 229 (584)
.|..+|+|-+-.+.++.-. .|..++|...+. ..+...++|.|..++ ...+.|.-|..
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~--~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDK--DNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECS--SCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcC--CCCCcEEEEEECCCCCccccCCCeEEE
Confidence 5789999976333456554 588999987632 223468999998765 56888888876
No 323
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=39.89 E-value=97 Score=30.49 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=62.7
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH----HhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHH
Q 007936 298 DFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS----LKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQ 373 (584)
Q Consensus 298 D~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a----v~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk 373 (584)
..++.|| +.+.+..+++.. .++.+..-++.... -..+..+...++++-+.. ..+-+
T Consensus 172 ~vii~SF--~~~~l~~~~~~~------p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------~~~~~ 231 (287)
T 2oog_A 172 HVMIQSF--SDESLKKIHRQN------KHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDY------------TDLTE 231 (287)
T ss_dssp SEEEEES--CHHHHHHHHHHC------TTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBG------------GGCCH
T ss_pred CEEEEeC--CHHHHHHHHHhC------CCCcEEEEecCCcccccCHHHHHHHhhhheEEcccH------------hhcCH
Confidence 4788888 677777777643 23444333432211 122344444456654321 11235
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHH
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVL 440 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m 440 (584)
..++.++++|++|.+.|- + +..++..++..|+|+|+- .||..+.+++
T Consensus 232 ~~v~~~~~~G~~v~~wTv------n-------~~~~~~~l~~~GVdgIiT-------D~P~~~~~~~ 278 (287)
T 2oog_A 232 QNTHHLKDLGFIVHPYTV------N-------EKADMLRLNKYGVDGVFT-------NFADKYKEVI 278 (287)
T ss_dssp HHHHHHHHTTCEECCBCC------C-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeC------C-------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHH
Confidence 788999999999999872 1 234566778899999974 5887766554
No 324
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=39.84 E-value=1.6e+02 Score=28.99 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=71.5
Q ss_pred hhHHhHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCH------------HHHhcHHHHHHh--
Q 007936 288 DIDFGITEGVDFIAI-----SFVKSAEVINHLKSYIAARSRDSDIAVIAKIESI------------DSLKNLEEIILA-- 348 (584)
Q Consensus 288 dI~~al~~gvD~I~l-----SfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~------------~av~NldeIl~~-- 348 (584)
.+..+.+.|+|.|=+ .-..+.+++.+....++.. . .+++||.-+-|. +-++=+...++.
T Consensus 37 ~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~-~-~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~ 114 (257)
T 2yr1_A 37 EAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNI-A-GEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGA 114 (257)
T ss_dssp HHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHH-S-SSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHh-c-cCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 344556678887533 2244556666555555321 1 146777766432 223334555543
Q ss_pred CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeec
Q 007936 349 SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLS 424 (584)
Q Consensus 349 sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs 424 (584)
+|.|=| |+-..+ ..+++++.+++.|..+|++-+-+ ..+|+..|+...++ +...|+|.+=+.
T Consensus 115 ~d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 115 IDLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYF-----DGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp CSEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCC-----CCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 555443 443333 66678888899999999875533 45788888765554 777899987665
No 325
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=39.47 E-value=66 Score=32.31 Aligned_cols=127 Identities=10% Similarity=0.017 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChh-hHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRA-EVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWW 451 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrA-Ev~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~ 451 (584)
.-+...|+.+|.|+.+- | |..+ ....+...-..|++.+...++... .++.++.+...++.++-...
T Consensus 85 ~alA~~a~~~G~~~~iv------~-----p~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~- 151 (325)
T 1j0a_A 85 FVTGLAAKKLGLDAILV------L-----RGKEELKGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKP- 151 (325)
T ss_dssp HHHHHHHHHTTCEEEEE------E-----ESCCCSCHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCE-
T ss_pred HHHHHHHHHhCCcEEEE------E-----CCCCCCCchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCce-
Confidence 45667899999998875 1 2111 122334455689998776644321 11223444433332110000
Q ss_pred hhhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 452 REEKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
.+...+.. .+ ...+.....+.|+.++++ .++||+..-+|.|+.-+++ ..|.+.|++|-+..
T Consensus 152 -------~~~p~~~~--n~-~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~ 218 (325)
T 1j0a_A 152 -------YVIPPGGA--SP-IGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGR 218 (325)
T ss_dssp -------EEECGGGC--SH-HHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSS
T ss_pred -------EEEcCCCC--CH-HHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecC
Confidence 01111110 01 011222345677777774 7999999999999876664 57999999998853
No 326
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=39.40 E-value=41 Score=29.91 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=32.7
Q ss_pred HHHHHHHHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEEcCc
Q 007936 478 CNSAAKMANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAFTST 521 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiavT~~ 521 (584)
+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+-+.
T Consensus 108 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV~~~ 159 (163)
T 1tq8_A 108 VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIVHTT 159 (163)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEEeCC
Confidence 444567888899999999886 3667777777654 999998654
No 327
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=39.33 E-value=2.3e+02 Score=28.96 Aligned_cols=121 Identities=15% Similarity=0.198 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|++.|.++.+- .|.......+...-..|++.+... |.| -++.+...++..+- .
T Consensus 121 ~a~A~aa~~~G~~~~iv-----------~P~~~~~~k~~~~~~~GA~V~~v~-----~~~-~~~~~~a~~~~~~~-~--- 179 (366)
T 3iau_A 121 QGVALAGQRLNCVAKIV-----------MPTTTPQIKIDAVRALGGDVVLYG-----KTF-DEAQTHALELSEKD-G--- 179 (366)
T ss_dssp HHHHHHHHHTTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHHH-T---
T ss_pred HHHHHHHHHhCCceEEE-----------eCCCCCHHHHHHHHHCCCeEEEEC-----cCH-HHHHHHHHHHHHhc-C---
Confidence 34566799999998875 244333345566677899876654 233 45655544443321 1
Q ss_pred hhhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhc-CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCchh
Q 007936 453 EEKRHEAMELPDVGSSFAESISEEICNSAAKMANNL-EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTTS 523 (584)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l-~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~~ 523 (584)
.+...+.. .+. ........+.++.+++ ..+.||+.+-+|.+..-+++ ..|.+.|+++-++..
T Consensus 180 ------~~~i~~~~--n~~-~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 180 ------LKYIPPFD--DPG-VIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp ------CEECCSSS--SHH-HHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred ------CEecCCCC--ChH-HHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 11111111 111 1233334456777666 46899999999998766543 469999999987643
No 328
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=39.18 E-value=1.5e+02 Score=29.16 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=50.4
Q ss_pred CCCCChhhHHHHHHHHHcccceEeecCCC---CCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHH
Q 007936 399 YPTPTRAEVADVSEAVRQRADALMLSGES---AMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISE 475 (584)
Q Consensus 399 ~p~PTrAEv~Dv~nav~~G~D~imLs~ET---a~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (584)
.+.|+...+.++..|+.+|||.|=+---- -.|+|.. ..+-+..+...+..... ++-++. ..+.+
T Consensus 90 G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~-v~~eI~~v~~a~~~~~l------KVIlEt------~~Lt~ 156 (239)
T 3ngj_A 90 GATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDD-VEKDVKAVVDASGKALT------KVIIEC------CYLTN 156 (239)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHH-HHHHHHHHHHHHTTSEE------EEECCG------GGSCH
T ss_pred CCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHH-HHHHHHHHHHHhcCCce------EEEEec------CCCCH
Confidence 44577778899999999999987542211 1255543 44555555554432100 000110 01122
Q ss_pred HHHHHHHHHHhhcCCcEEEEccCCch
Q 007936 476 EICNSAAKMANNLEVDALFVYTKTGH 501 (584)
Q Consensus 476 ~ia~sav~~A~~l~a~aIvv~T~sG~ 501 (584)
.-...|+++|.+.+|+ ||=|.||.
T Consensus 157 eei~~a~~ia~~aGAD--fVKTSTGf 180 (239)
T 3ngj_A 157 EEKVEVCKRCVAAGAE--YVKTSTGF 180 (239)
T ss_dssp HHHHHHHHHHHHHTCS--EEECCCSS
T ss_pred HHHHHHHHHHHHHCcC--EEECCCCC
Confidence 3356688999999999 56666664
No 329
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=38.99 E-value=83 Score=31.26 Aligned_cols=123 Identities=17% Similarity=0.169 Sum_probs=71.5
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++++- .|.......+...-..|++.+...++. .| .++++...++..+-
T Consensus 79 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~------ 137 (303)
T 1o58_A 79 AIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGEL---GM-KGAVEKALEISRET------ 137 (303)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHH------
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHhc------
Confidence 4667889999998875 233223344555666799987754321 12 34544433333211
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC--CcEEEEccCCchHHHHHhcc----CCC-CcEEEEcCchh
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE--VDALFVYTKTGHMASLLSRC----RPD-CPIFAFTSTTS 523 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~--a~aIvv~T~sG~tA~~lSr~----RP~-~PIiavT~~~~ 523 (584)
+.+...+.. .+..+.......+.|+.++++ .++||+.+-+|.++.-++++ .|. ..|+++.+...
T Consensus 138 ----~~~~~~~~~--n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 138 ----GAHMLNQFE--NPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp ----CCBCCCTTT--CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred ----CeEeCCCCC--CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 111111111 111111112344677777774 79999999999998776653 588 99999988654
No 330
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=38.75 E-value=43 Score=29.48 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=33.4
Q ss_pred HHHHHHHHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEEcCch
Q 007936 478 CNSAAKMANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAFTSTT 522 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiavT~~~ 522 (584)
+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+-+..
T Consensus 106 ~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv~~~~ 158 (170)
T 2dum_A 106 WDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLIIKEVD 158 (170)
T ss_dssp HHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEEccCC
Confidence 445577888999999999876 3567777777754 9999986543
No 331
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=38.64 E-value=49 Score=33.54 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=36.1
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCC--ChHHHHHHHHHHHHHHhhhhh
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQ--FPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~--yPveaV~~m~~I~~~aE~~~~ 452 (584)
+.|||....+- .-.|+..++..|||++++..---.+. =+...-+++..+..+.+.++.
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~ 315 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALF 315 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 68998864332 34688999999999999975322110 012233566666666666543
No 332
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=38.62 E-value=38 Score=35.67 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=23.5
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
..|||....+- --.|+..++..|||++++..
T Consensus 307 ~ipVia~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 307 KVEVFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp SSEEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred CCEEEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 48888764322 34688999999999999964
No 333
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=38.51 E-value=58 Score=31.53 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=64.8
Q ss_pred CEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCH----HHHhcHHHHHHh--CCEEEEeCCcccccCCCCChHHH
Q 007936 298 DFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESI----DSLKNLEEIILA--SDGAMVARGDLGAQIPLEQVPSA 371 (584)
Q Consensus 298 D~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~----~av~NldeIl~~--sDGImIaRGDLg~ei~~e~V~~~ 371 (584)
..++.|| +.+.+..+++.. .++.+ +-+... .++..+-+.+.. +|.+-.. ...+
T Consensus 134 ~v~~~SF--~~~~l~~~~~~~------p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 192 (250)
T 3ks6_A 134 RTTFSSF--LLASMDELWKAT------TRPRL-WLVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDTA 192 (250)
T ss_dssp GEEEEES--CHHHHHHHHHHC------CSCEE-EEECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGGC
T ss_pred CEEEEeC--CHHHHHHHHHHC------CCCcE-EEEecccccccchhHHHHHHHhcCCCEEecc------------hhhC
Confidence 5788888 577777777643 23443 233221 122222222222 3443322 1223
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHH
Q 007936 372 QQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSV 443 (584)
Q Consensus 372 Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I 443 (584)
-+..++.|+++|++|.+.|- - +..++..++..|+|+|+- .||..+.+++.++
T Consensus 193 ~~~~v~~~~~~G~~V~~WTv----------n---~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWAA----------H---TPSQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp CHHHHHHHHHTTCEEEEECC----------C---SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEeC----------C---CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 46889999999999999971 1 224567778899999985 5899988887765
No 334
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=38.25 E-value=3.2e+02 Score=27.42 Aligned_cols=111 Identities=15% Similarity=0.009 Sum_probs=63.4
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEe--ecCHHHHhcHHHHHHh-CCEEEEeCCcccc
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAK--IESIDSLKNLEEIILA-SDGAMVARGDLGA 361 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAK--IEt~~av~NldeIl~~-sDGImIaRGDLg~ 361 (584)
+.+....+.+.|.-+++..---+++.+.+..+.++.. .+ ..+... +-++.--+.++.+++. +|+|.++-|+
T Consensus 39 ~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-~~--~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~--- 112 (326)
T 3bo9_A 39 TPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-TD--KPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN--- 112 (326)
T ss_dssp CHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-CS--SCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC---
T ss_pred CHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-cC--CCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC---
Confidence 4555666677787655544333677766655555321 11 122222 2233333334444444 7999987552
Q ss_pred cCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 362 QIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 362 ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
| ..+++.+++.|.|++... .+. .+...+...|+|++.+++
T Consensus 113 --p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v~g 152 (326)
T 3bo9_A 113 --P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIAEG 152 (326)
T ss_dssp --C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEEC
T ss_pred --c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEEEC
Confidence 3 245677788899988631 222 334557788999999965
No 335
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=38.25 E-value=60 Score=33.61 Aligned_cols=63 Identities=21% Similarity=0.196 Sum_probs=42.2
Q ss_pred CceEEEecCCC--CCCHHH----HHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPA--TCGFEQ----LEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa--~~~~e~----l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....++.|.. ..+++. .+++.+.|.+.+.|+..|++.++-.+.++.+|++ .|..+.|++|..
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 218 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IGKDAQLAVDAN 218 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HTTTCEEEEECT
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cCCCCeEEEECC
Confidence 34555554431 124543 4677789999999999998877777777777764 455577777764
No 336
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=38.14 E-value=2.2e+02 Score=27.10 Aligned_cols=122 Identities=20% Similarity=0.199 Sum_probs=70.0
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEe-e--------cC----HHHHhcHHHHHHh-----
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAK-I--------ES----IDSLKNLEEIILA----- 348 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAK-I--------Et----~~av~NldeIl~~----- 348 (584)
+.++++.+.|+|+|=+....-.+++.++++.++ ..| +.+.+- . .. .++++.+...++.
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~--~~g--l~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG 117 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALN--GRN--IKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELG 117 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHT--TSS--CEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHH--HcC--CeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 456788899999999998877888999999994 222 343221 0 01 2345555555554
Q ss_pred CCEEEEeCCcccc--cCC-----CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHH
Q 007936 349 SDGAMVARGDLGA--QIP-----LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAV 414 (584)
Q Consensus 349 sDGImIaRGDLg~--ei~-----~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav 414 (584)
++.|.+..|.-.. ..| ++.+...-+++...|.+.|..+.+=+. ..+..+...|-.++.++...+
T Consensus 118 a~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~--~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 118 STGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL--NRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp CSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC--CTTTCSSCCCHHHHHHHHHHH
T ss_pred CCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec--CcccCcccCCHHHHHHHHHHc
Confidence 5677775552211 122 123445556677778888877665321 111122344555665555554
No 337
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=38.08 E-value=32 Score=33.95 Aligned_cols=49 Identities=27% Similarity=0.186 Sum_probs=32.7
Q ss_pred CceEEEecC-CC-CCCHHHHHHHHHhcCCEEEEeCCCCCHHH-HHHHHHHHH
Q 007936 106 RTKLVCTIG-PA-TCGFEQLEALAVGGMNVARINMCHGTREW-HRRVIERVR 154 (584)
Q Consensus 106 ~tKIi~TiG-Pa-~~~~e~l~~li~~Gm~v~RiN~sHg~~e~-~~~~i~~ir 154 (584)
+++.-.|.| |. ..+.+.++.|.++|+|++=+-.|.|...+ ..++++.+|
T Consensus 7 ~~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir 58 (240)
T 1viz_A 7 TEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVR 58 (240)
T ss_dssp GGCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHT
T ss_pred CcceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhh
Confidence 455667777 64 36789999999999999999999887533 444444444
No 338
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=37.89 E-value=2.6e+02 Score=28.42 Aligned_cols=112 Identities=13% Similarity=0.218 Sum_probs=67.5
Q ss_pred hHHhHhcCCCEEEEcC---------------CCCHHHHHHHHHHHHhhcCCCCceEEEeecCH------HHHhcHHHHHH
Q 007936 289 IDFGITEGVDFIAISF---------------VKSAEVINHLKSYIAARSRDSDIAVIAKIESI------DSLKNLEEIIL 347 (584)
Q Consensus 289 I~~al~~gvD~I~lSf---------------V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~------~av~NldeIl~ 347 (584)
++...+.|+++|-+== +...+.+..++...+. +.+..|+|+.|.. ++++......+
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A---~~~~~I~ARtda~~~~g~~~ai~Ra~ay~e 186 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV---APSLYIVARTDARGVEGLDEAIERANAYVK 186 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH---CTTSEEEEEECCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc---CCCeEEEEeeccccccCHHHHHHHHHHHHH
Confidence 4455667888775421 2223566777776643 5678999999986 44444444444
Q ss_pred h-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 348 A-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 348 ~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
+ +|+|++- .. .. -+.+-+.|++..+|+++ .|++- -..|.+|.+|..+ .|+.-+...
T Consensus 187 AGAD~i~~e-------~~-~~----~~~~~~i~~~~~~P~~~--n~~~~-g~tp~~~~~eL~~------lGv~~v~~~ 243 (305)
T 3ih1_A 187 AGADAIFPE-------AL-QS----EEEFRLFNSKVNAPLLA--NMTEF-GKTPYYSAEEFAN------MGFQMVIYP 243 (305)
T ss_dssp HTCSEEEET-------TC-CS----HHHHHHHHHHSCSCBEE--ECCTT-SSSCCCCHHHHHH------TTCSEEEEC
T ss_pred cCCCEEEEc-------CC-CC----HHHHHHHHHHcCCCEEE--eecCC-CCCCCCCHHHHHH------cCCCEEEEc
Confidence 4 8999982 21 11 24455677778899964 23321 1235567666654 488776653
No 339
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=37.85 E-value=28 Score=36.91 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=34.4
Q ss_pred EecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHH
Q 007936 111 CTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRR 155 (584)
Q Consensus 111 ~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~ 155 (584)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 4456543 799999999999999999999988777777776664
No 340
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=37.84 E-value=26 Score=34.78 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=33.3
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCC---------CH-HHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 119 GFEQLEALAVGGMNVARINMCHG---------TR-EWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 119 ~~e~l~~li~~Gm~v~RiN~sHg---------~~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
+.+.++.|.+.|+|++||-++.. .. +...+.++.+=+...+.| +.+++|+-.
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--i~vild~h~ 94 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPHN 94 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEeccc
Confidence 48899999999999999988531 11 222333333333344444 778889864
No 341
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=37.78 E-value=33 Score=29.00 Aligned_cols=40 Identities=3% Similarity=-0.095 Sum_probs=29.8
Q ss_pred HHHHHHHHhhcCCcEEEEccCCchHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAKMANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiav 518 (584)
+...++.|.+.+++.||+-++.-+++..+.+.-| |||+.+
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 98 SEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 4445778889999999888764367777777655 999864
No 342
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=37.72 E-value=1.1e+02 Score=39.13 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=75.0
Q ss_pred HhhhHHhHhcCCCE--EEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEEeecCH-HHHhcHHHHHHh-CCEEE---EeCC
Q 007936 286 WLDIDFGITEGVDF--IAISFVK-SAEVINHLKSYIAARSRDSDIAVIAKIESI-DSLKNLEEIILA-SDGAM---VARG 357 (584)
Q Consensus 286 ~~dI~~al~~gvD~--I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiAKIEt~-~av~NldeIl~~-sDGIm---IaRG 357 (584)
.+.++.+++.|++. |.+++=. +.+ ++.++++ .. .+.++..+-+. +|.+-...+.+. +|+|+ +--+
T Consensus 656 ~~~~~~~~~~gv~i~gv~~~~G~p~~e---~~~~~l~--~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ 728 (2060)
T 2uva_G 656 IPLLGRLRADGVPIEGLTIGAGVPSIE---VANEYIQ--TL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGG 728 (2060)
T ss_dssp HHHHHHHHTTTCCEEEEEEESSCCCHH---HHHHHHH--HS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCT
T ss_pred HHHHHHHHHcCCCcceEeecCCCCCHH---HHHHHHH--Hc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcc
Confidence 36678889999999 8877743 332 3445553 22 36677666543 344443445555 89888 6555
Q ss_pred cccccCCCCChHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChhhHHHHHHHH-----------HcccceEee
Q 007936 358 DLGAQIPLEQVPSAQQKIVQLCRQ-LNKPVIVASQLLESMIEYPTPTRAEVADVSEAV-----------RQRADALML 423 (584)
Q Consensus 358 DLg~ei~~e~V~~~Qk~II~~c~~-~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav-----------~~G~D~imL 423 (584)
|=|-+.+.+++....-.++...++ .+.|+|.|..+ - .-.|++.++ ..|||++++
T Consensus 729 eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI---------~---~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 729 RGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGF---------G---GSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp TSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSC---------C---SHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred cCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCC---------C---CHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 666666655433333344444444 48999988543 2 345888999 899999987
No 343
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=37.52 E-value=93 Score=29.98 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=43.2
Q ss_pred HHhhcCCcEEEEccCC---------chHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEe--cCCCCHHHHHHHH
Q 007936 484 MANNLEVDALFVYTKT---------GHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRL--SFSDDMESNLNRT 552 (584)
Q Consensus 484 ~A~~l~a~aIvv~T~s---------G~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~--~~~~d~~~~i~~~ 552 (584)
.+.+.++++||+-++. |+++..+.+.-| |||+.+-+.... ......+++ +.+......++.+
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~~------~~~~~~Ilv~~d~s~~s~~al~~a 190 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIFKHDMVV------NSLFDRVLVAYDFSKWADRALEYA 190 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEECCCTTT------TCTTSEEEEECCSSHHHHHHHHHH
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEecCcccc------CccCCEEEEEECCCHHHHHHHHHH
Confidence 7788899999887753 556777777766 999999776531 112223333 3333344456677
Q ss_pred HHHHHHc
Q 007936 553 FSLLKAR 559 (584)
Q Consensus 553 ~~~~k~~ 559 (584)
..+++..
T Consensus 191 ~~la~~~ 197 (294)
T 3loq_A 191 KFVVKKT 197 (294)
T ss_dssp HHHHHHH
T ss_pred HHHhhhc
Confidence 7666653
No 344
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=37.42 E-value=66 Score=26.30 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=45.2
Q ss_pred HHHHHHhhcCCcEEEEccC----Cch-HHHHHhccCCCCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHHHHHHHH
Q 007936 480 SAAKMANNLEVDALFVYTK----TGH-MASLLSRCRPDCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMESNLNRTF 553 (584)
Q Consensus 480 sav~~A~~l~a~aIvv~T~----sG~-tA~~lSr~RP~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~~i~~~~ 553 (584)
.|.+...+...++|++=.. +|. ..+.+-+..|.+|||.+|....... .-.+..|+.-++.+...+.+. +..++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~-l~~~i 120 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNR-LREMV 120 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CH-HHHHH
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHH-HHHHH
Confidence 3445556667887777433 333 3455666779999999998765542 223567888888876544443 33344
Q ss_pred HHH
Q 007936 554 SLL 556 (584)
Q Consensus 554 ~~~ 556 (584)
..+
T Consensus 121 ~~~ 123 (130)
T 3eod_A 121 FAC 123 (130)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 345
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=37.17 E-value=73 Score=32.64 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=65.7
Q ss_pred ccCHh-hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee-------cC--HH-HHhcHHHHHHhCCE
Q 007936 283 PKDWL-DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI-------ES--ID-SLKNLEEIILASDG 351 (584)
Q Consensus 283 ~kD~~-dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI-------Et--~~-av~NldeIl~~sDG 351 (584)
+.|.+ -|+.|.+.||+.++++-+ +.++...+.++.+.......+.+++-+ .. .+ .++.|++.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 45655 457889999999888766 678888887777431100011344443 11 11 45666677665432
Q ss_pred EEEeCCcccccCCC-C-ChHHHHH----HHHHHHHH-cCCCeEEeh
Q 007936 352 AMVARGDLGAQIPL-E-QVPSAQQ----KIVQLCRQ-LNKPVIVAS 390 (584)
Q Consensus 352 ImIaRGDLg~ei~~-e-~V~~~Qk----~II~~c~~-~gKPvivAT 390 (584)
=.+|=|+.|.+.-. . .-...|+ +-++.|++ .++||++.|
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~ 175 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 34455777777643 2 1234564 45778999 999999986
No 346
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=36.88 E-value=1.6e+02 Score=29.29 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=85.1
Q ss_pred CHhhhHHhHhcC-CCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee----cCHHHHhcHHHHHHh-----CCEEEE
Q 007936 285 DWLDIDFGITEG-VDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI----ESIDSLKNLEEIILA-----SDGAMV 354 (584)
Q Consensus 285 D~~dI~~al~~g-vD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI----Et~~av~NldeIl~~-----sDGImI 354 (584)
..+-++.+++.| +|||=+-.-...+.+.++.+.... ..++||+-- .|+. .+.+.+++.. +|.+=|
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~----~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ----HNVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADIPKI 195 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH----TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh----CCCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCEEEE
Confidence 355567889999 999999887777777777776532 236666643 2443 2334333322 576655
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccce--EeecCCCCCCC
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQ-LNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADA--LMLSGESAMGQ 431 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~-~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~--imLs~ETa~G~ 431 (584)
+. +.-..+++..+.+-.-..... .++|+|.- +|=.....+|. .+.+. |.-. -.+...+|=|+
T Consensus 196 a~----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SRi-----~~~~~-GS~vTf~~l~~~sAPGQ 260 (276)
T 3o1n_A 196 AV----MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISRL-----AGEVF-GSAATFGAVKKASAPGA 260 (276)
T ss_dssp EE----CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHHH-----CHHHH-TCCEEECBSSCCSSTTC
T ss_pred Ee----cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHHH-----HHHHh-CCceEecCCCCCCCCCC
Confidence 41 111224666665544443333 57898864 56666666664 66554 3222 23567899999
Q ss_pred ChHHHHHHHHHHHH
Q 007936 432 FPDKALTVLRSVSL 445 (584)
Q Consensus 432 yPveaV~~m~~I~~ 445 (584)
.+++-++.+-++..
T Consensus 261 l~~~~l~~~l~~l~ 274 (276)
T 3o1n_A 261 ISVADLRTVLTILH 274 (276)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 99988877665544
No 347
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=36.59 E-value=55 Score=31.71 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=43.0
Q ss_pred EEecccchhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEc-------CceeCCCceeeecc
Q 007936 210 ITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTD-------PGLLLPRANLTFWR 266 (584)
Q Consensus 210 i~v~~~~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~-------~G~l~s~Kgvnf~~ 266 (584)
+.+..+.+.+.+..||.|-+|+ +.|.|.++.++.+.+.+.. =|.++....||..|
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLER 86 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEecc
Confidence 4444455778999999999977 9999999999988887753 26677788888544
No 348
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=36.58 E-value=1.1e+02 Score=25.38 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=42.8
Q ss_pred HHHHhh-cCCcEEEEcc-----CCchH-HHHHhccCCCCcEEEEcCchhhhcc-cccccccEEEEecCCC--CHHHHHHH
Q 007936 482 AKMANN-LEVDALFVYT-----KTGHM-ASLLSRCRPDCPIFAFTSTTSVRRR-LNLRWGLIPFRLSFSD--DMESNLNR 551 (584)
Q Consensus 482 v~~A~~-l~a~aIvv~T-----~sG~t-A~~lSr~RP~~PIiavT~~~~~aR~-l~l~~GV~P~~~~~~~--d~~~~i~~ 551 (584)
.+...+ ...++|++=. .+|.. ++.+-+ .|.+|||++|........ -.+..|+.-++.+... .....++.
T Consensus 42 ~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~ 120 (140)
T 3h5i_A 42 VEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQ-ISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEM 120 (140)
T ss_dssp HHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHH-HCCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHh-CCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHH
Confidence 333333 5678777743 33433 344444 399999999987654332 2345689888886532 22334455
Q ss_pred HHHHHH
Q 007936 552 TFSLLK 557 (584)
Q Consensus 552 ~~~~~k 557 (584)
++...+
T Consensus 121 ~l~~~~ 126 (140)
T 3h5i_A 121 ALRLYE 126 (140)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 349
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=36.51 E-value=1.3e+02 Score=29.61 Aligned_cols=65 Identities=12% Similarity=0.369 Sum_probs=36.5
Q ss_pred hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEE
Q 007936 288 DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMV 354 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImI 354 (584)
-++.+...|+|+|++=.=.+..+...+.+.+..... ....++..|-..+. ..+..++.. .||||+
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~-~~~~~~VRVn~~~~-~di~~~ld~G~~gI~l 94 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKN-AGVSVLVRIPQVDR-AHVQRLLDIGAEGFMI 94 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHH-HTCEEEEECSSCCH-HHHHHHHHHTCCEEEE
T ss_pred HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhh-cCCeEEEEeCCCCH-HHHHHHHhcCCCEEEE
Confidence 456677889999998554444444444444432111 13567777755443 345555544 678876
No 350
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=36.41 E-value=74 Score=33.74 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=47.4
Q ss_pred cccccccchHhhh---cCCCCCCCCceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Q 007936 85 SIEVDSVTEAELK---ENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKG 161 (584)
Q Consensus 85 ~~~~~~~~~~~~~---~~~~~~~r~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~ 161 (584)
+.++|+.|..|+. +.|+ ...+|+.+ ||. .+++.|+..++.|+. ++|+.. .++. +.+.++.++.|
T Consensus 97 G~g~dvaS~~E~~~~~~~G~---~~~~I~~~-g~~-k~~~ei~~a~~~gv~--~~~vds--~~el----~~l~~~a~~~~ 163 (443)
T 3vab_A 97 GAGADTVSQGEIRRALAAGI---PANRIVFS-GVG-KTPREMDFALEAGIY--CFNVES--EPEL----EILSARAVAAG 163 (443)
T ss_dssp TCEEEESSHHHHHHHHHTTC---CGGGEEEE-CTT-CCHHHHHHHHHHTCS--EEEECC--HHHH----HHHHHHHHHHT
T ss_pred CCcEEEeCHHHHHHHHHcCC---ChhhEEEc-CCC-CCHHHHHHHHHCCCC--EEEECC--HHHH----HHHHHHHHhcC
Confidence 4589999988866 5565 33567775 774 458899999999987 355533 4444 34445555667
Q ss_pred CceEEEeec
Q 007936 162 FAVAIMMDT 170 (584)
Q Consensus 162 ~~i~I~lDl 170 (584)
.++.+++.+
T Consensus 164 ~~~~V~lRV 172 (443)
T 3vab_A 164 KVAPVSLRI 172 (443)
T ss_dssp CCEEEEEEE
T ss_pred CCceEEEEE
Confidence 666665544
No 351
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=36.32 E-value=25 Score=36.77 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=36.0
Q ss_pred HHHHc--CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCC-----CCCChHHHHHHHHHHHHHHhhh
Q 007936 378 LCRQL--NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESA-----MGQFPDKALTVLRSVSLRIEKW 450 (584)
Q Consensus 378 ~c~~~--gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa-----~G~yPveaV~~m~~I~~~aE~~ 450 (584)
.++.. ..|+|...-+- --.|++.|+..|||++++..--- .| +....+++..+.++.+.+
T Consensus 271 ~v~~~~~~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G--~~~v~~~l~~l~~eL~~~ 336 (365)
T 3sr7_A 271 NAQPLMDKVEILASGGIR------------HPLDIIKALVLGAKAVGLSRTMLELVEQHS--VHEVIAIVNGWKEDLRLI 336 (365)
T ss_dssp HHGGGTTTSEEEECSSCC------------SHHHHHHHHHHTCSEEEESHHHHHHHHHSC--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEECHHHHHHHHhcC--hHHHHHHHHHHHHHHHHH
Confidence 34444 56777654322 24689999999999999964211 11 222345666666666654
Q ss_pred h
Q 007936 451 W 451 (584)
Q Consensus 451 ~ 451 (584)
+
T Consensus 337 m 337 (365)
T 3sr7_A 337 M 337 (365)
T ss_dssp H
T ss_pred H
Confidence 4
No 352
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=36.31 E-value=28 Score=35.28 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=47.2
Q ss_pred CHhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH--HhcHHHHHHh-CCEEEEeC
Q 007936 285 DWLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS--LKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 285 D~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a--v~NldeIl~~-sDGImIaR 356 (584)
+.+.++.+++.|+|+|.+.. -++++++++++.++.. +.++++.| --| .+|+.++.+. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~--~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDN-LSPEEVKDISRRIKDI--NPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHH--CTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhcc--CCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 46778889999999999998 4789999999988421 12344333 222 3567777766 89999986
No 353
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=36.25 E-value=49 Score=32.66 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=28.1
Q ss_pred CceEEE--eecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCC
Q 007936 326 DIAVIA--KIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNK 384 (584)
Q Consensus 326 ~i~IiA--KIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gK 384 (584)
++.||+ -|-|.+- +.+.++. +|+|++||+=|. +.+-+..+.+.+-......|.
T Consensus 241 ~ipvia~GGI~~~~d---~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 241 DIPIIGMGGVANAQD---VLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp SSCEEECSSCCSHHH---HHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCcCCHHH---HHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCC
Confidence 466776 3444432 3333333 899999998665 333333444444333344443
No 354
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=35.98 E-value=52 Score=27.75 Aligned_cols=43 Identities=7% Similarity=0.001 Sum_probs=31.3
Q ss_pred HHHHHHHHhhcCCcEEEEccCC------chHHHHHhccCCCCcEEEEcCc
Q 007936 478 CNSAAKMANNLEVDALFVYTKT------GHMASLLSRCRPDCPIFAFTST 521 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~s------G~tA~~lSr~RP~~PIiavT~~ 521 (584)
+...++.|.+.+++.||+-++. |+++..+.+.-| |||+.+-+.
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv~~~ 139 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEEECC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEeeCC
Confidence 3445678888999999998762 456666766554 999998654
No 355
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=35.82 E-value=71 Score=29.29 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=41.5
Q ss_pred eEeeCCCEEEEeecc---cCCCCCCCEEEecccchhcc---cCCCCEEEEeCCeeEEEEEEEeCCeEEE
Q 007936 186 ARAEDGEIWTFTVRA---FDSPRPERTITVNYDGFAED---VKVGDELLVDGGMVRFEVIEKIGPDVKC 248 (584)
Q Consensus 186 i~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~~~---v~vGd~I~idDG~i~l~V~~~~~~~i~c 248 (584)
.-++.|++++|+... |-...++....++...|.+. +++|+.+.+++. ...|+++.++.+..
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~~--~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGI--PGKIVSINSGRVLV 128 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETTE--EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecCC--CeEEEEEcCCEEEE
Confidence 346789999998763 32234445566777777652 567999999643 46788888876543
No 356
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=35.74 E-value=67 Score=31.79 Aligned_cols=53 Identities=9% Similarity=0.175 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhcCCEEEEeCCC---------CC-HHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 118 CGFEQLEALAVGGMNVARINMCH---------GT-REWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 118 ~~~e~l~~li~~Gm~v~RiN~sH---------g~-~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
.+.+.|+.|.+.|+|++||-++. +. .+...+.++.+=+...+.| +.+++|+-+
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 35899999999999999997642 22 1222333444333444445 677888865
No 357
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=35.73 E-value=1.3e+02 Score=24.73 Aligned_cols=59 Identities=12% Similarity=0.187 Sum_probs=31.8
Q ss_pred ecCCCeEEEeecCCCCceEeeCCCEEEEeecccCCCCCCCEEEecccchh--cccCCCCEEEEeC-CeeEEEE
Q 007936 169 DTEGSEIHMGDLSGPPSARAEDGEIWTFTVRAFDSPRPERTITVNYDGFA--EDVKVGDELLVDG-GMVRFEV 238 (584)
Q Consensus 169 Dl~GpkIR~G~~~~~~~i~l~~G~~v~~t~~~~~~~~~~~~i~v~~~~~~--~~v~vGd~I~idD-G~i~l~V 238 (584)
.|++|-..+|.+- ++-..+.+.+... +.....++...+. +.+++|++|.++. ....+.+
T Consensus 13 ~L~~~P~~vG~v~-----e~~dd~~~iVkss------~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~v 74 (85)
T 3h43_A 13 RMRVPPLIVGTVV-----DKVGERKVVVKSS------TGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDV 74 (85)
T ss_dssp HHHSCCEEEEEEE-----EEEETTEEEEEET------TSSEEEEEBCTTSCGGGCCTTCEEEECTTTCCEEEE
T ss_pred HhcCCCceEEEEE-----EEcCCCEEEEEeC------CCCeEEEEecCccCHHHCCCCCEEEECCcccCHhhh
Confidence 4566667777662 2222233333221 1134455544443 5799999999996 4444443
No 358
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=35.72 E-value=2.5e+02 Score=27.48 Aligned_cols=135 Identities=15% Similarity=0.105 Sum_probs=76.6
Q ss_pred cCCccccCCCCCccCHhh----hHHhHhcCCCEEE-----EcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHH----
Q 007936 271 VRERNAMLPTISPKDWLD----IDFGITEGVDFIA-----ISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESID---- 337 (584)
Q Consensus 271 lp~~~~~lp~lt~kD~~d----I~~al~~gvD~I~-----lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~---- 337 (584)
.|..++++ +.++.++ ++.+...|+|.|= +..+.+.+++.++-..++. .-.+.++|.-+=|..
T Consensus 19 ~PkIcvpl---~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~--~~~~lPiI~T~Rt~~EGG~ 93 (258)
T 4h3d_A 19 RPKICVPI---IGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRS--YIHDIPLLFTFRSVVEGGE 93 (258)
T ss_dssp SCEEEEEE---CCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHH--HCTTSCEEEECCCGGGTCS
T ss_pred CCEEEEEe---CCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHH--hcCCCCEEEEEechhhCCC
Confidence 34455544 4444444 3455677888863 3344555565555554432 112466777664321
Q ss_pred -------HHhcHHHHHHh--CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHH
Q 007936 338 -------SLKNLEEIILA--SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVA 408 (584)
Q Consensus 338 -------av~NldeIl~~--sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~ 408 (584)
-++-+.+++.. +|.|=| |+. .-....+.++..+++.|..+|++-+=+ +.+|+..|+.
T Consensus 94 ~~~~~~~~~~ll~~~~~~~~~d~iDv-------El~--~~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~ 159 (258)
T 4h3d_A 94 KLISRDYYTTLNKEISNTGLVDLIDV-------ELF--MGDEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIV 159 (258)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSEEEE-------EGG--GCHHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCchhhHH-------hhh--ccHHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHH
Confidence 12223333332 444432 222 223567789999999999999886544 4588888875
Q ss_pred H-HHHHHHcccceEeec
Q 007936 409 D-VSEAVRQRADALMLS 424 (584)
Q Consensus 409 D-v~nav~~G~D~imLs 424 (584)
. +..+...|+|-+=+.
T Consensus 160 ~~~~~~~~~gaDIvKia 176 (258)
T 4h3d_A 160 SRLCRMQELGADLPKIA 176 (258)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhCCCEEEEE
Confidence 4 455677888976654
No 359
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=35.54 E-value=42 Score=32.99 Aligned_cols=49 Identities=29% Similarity=0.222 Sum_probs=35.9
Q ss_pred CceEEEecC-CC-CCCHHHHHHHHHhcCCEEEEeCCCCCH-HHHHHHHHHHH
Q 007936 106 RTKLVCTIG-PA-TCGFEQLEALAVGGMNVARINMCHGTR-EWHRRVIERVR 154 (584)
Q Consensus 106 ~tKIi~TiG-Pa-~~~~e~l~~li~~Gm~v~RiN~sHg~~-e~~~~~i~~ir 154 (584)
+.+.-.|.| |. ..+.+.++.|.++|+|+.=|-+|+|.. +...++++.+|
T Consensus 7 ~~~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir 58 (234)
T 2f6u_A 7 RKWRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVS 58 (234)
T ss_dssp GGCCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHT
T ss_pred CcceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhc
Confidence 345566777 64 367899999999999999999999864 33444555554
No 360
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=35.37 E-value=63 Score=32.52 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=45.0
Q ss_pred CCceEEEecC--CCC-------CC----HHHHHHHHHhcCCEEEEeCCC---C-----CHHHHHHHHHHHHHHHHHhCCc
Q 007936 105 RRTKLVCTIG--PAT-------CG----FEQLEALAVGGMNVARINMCH---G-----TREWHRRVIERVRRLNEEKGFA 163 (584)
Q Consensus 105 r~tKIi~TiG--Pa~-------~~----~e~l~~li~~Gm~v~RiN~sH---g-----~~e~~~~~i~~ir~~~~e~~~~ 163 (584)
.+|+|++=|. |-| .+ .+..++|++.|+++.=||.-- | ..|++.+++..++.+.++ .
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---~ 80 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---G 80 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT---T
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC---C
Confidence 4677887775 421 22 345688999999999999832 2 257888888888888765 4
Q ss_pred eEEEeecCCCeE
Q 007936 164 VAIMMDTEGSEI 175 (584)
Q Consensus 164 i~I~lDl~GpkI 175 (584)
+.|.+|+.-|++
T Consensus 81 ~piSIDT~~~~v 92 (280)
T 1eye_A 81 ITVSIDTMRADV 92 (280)
T ss_dssp CCEEEECSCHHH
T ss_pred CEEEEeCCCHHH
Confidence 566779976653
No 361
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=35.35 E-value=77 Score=30.80 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=40.3
Q ss_pred chhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcC-------ceeCCCceeeecc
Q 007936 216 GFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDP-------GLLLPRANLTFWR 266 (584)
Q Consensus 216 ~~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~-------G~l~s~Kgvnf~~ 266 (584)
.+.+.+..||.|-+|+ +.|.|.++.++.+.+.+... |.++....||..|
T Consensus 31 ~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (213)
T 1i8d_A 31 HMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVER 86 (213)
T ss_dssp GGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEE
T ss_pred HHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCc
Confidence 5678999999999977 99999999999888877643 6677778888543
No 362
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=34.93 E-value=1.7e+02 Score=28.06 Aligned_cols=73 Identities=5% Similarity=0.016 Sum_probs=48.0
Q ss_pred HHHHHHHhhcCCcEEEEccCC---------chHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEe--cCCCC---
Q 007936 479 NSAAKMANNLEVDALFVYTKT---------GHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRL--SFSDD--- 544 (584)
Q Consensus 479 ~sav~~A~~l~a~aIvv~T~s---------G~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~--~~~~d--- 544 (584)
...++.|...++++||+-++. |+++..+.+. -.|||+.+-+.... ....+++ +.+..
T Consensus 79 ~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~-~~~PVlvv~~~~~~--------~~~~Ilva~D~s~~~~~ 149 (290)
T 3mt0_A 79 QTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRF-APCPVLMTKTARPW--------TGGKILAAVDVGNNDGE 149 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHH-CSSCEEEECCCSCS--------TTCEEEEEECTTCCSHH
T ss_pred HHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhc-CCCCEEEecCCCCC--------CCCeEEEEECCCCcchh
Confidence 344566778899999987652 6777777765 45999999754321 2223333 44444
Q ss_pred ----HHHHHHHHHHHHHHcC
Q 007936 545 ----MESNLNRTFSLLKARG 560 (584)
Q Consensus 545 ----~~~~i~~~~~~~k~~g 560 (584)
.+..++.+..+++..|
T Consensus 150 ~~~~s~~al~~a~~la~~~~ 169 (290)
T 3mt0_A 150 HRSLHAGIISHAYDIAGLAK 169 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHcC
Confidence 5678888888888643
No 363
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=34.91 E-value=1e+02 Score=29.96 Aligned_cols=73 Identities=11% Similarity=0.009 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcCCcEEEEccCC---------chHHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEec--CCCC--
Q 007936 478 CNSAAKMANNLEVDALFVYTKT---------GHMASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLS--FSDD-- 544 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~s---------G~tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~--~~~d-- 544 (584)
+...++.|.+.++++||+-++. |+++..+.+.- .|||+.+-+... .....+++. .+.+
T Consensus 100 ~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~-~~PVlvv~~~~~--------~~~~~Ilva~D~s~~~~ 170 (319)
T 3olq_A 100 YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKC-PAPVWMVKDKEW--------PEYGTIVVAANLSNEES 170 (319)
T ss_dssp HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHC-SSCEEEEESSCC--------CTTCEEEEECCCSCCST
T ss_pred HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcC-CCCEEEecCccc--------ccCCeEEEEECCCCcch
Confidence 3444666777889999997753 77887777655 499999876531 123334443 3332
Q ss_pred -----HHHHHHHHHHHHHHc
Q 007936 545 -----MESNLNRTFSLLKAR 559 (584)
Q Consensus 545 -----~~~~i~~~~~~~k~~ 559 (584)
....++.+..+++..
T Consensus 171 ~~~~~s~~al~~a~~la~~~ 190 (319)
T 3olq_A 171 YHDALNLKLIELTNDLSHRI 190 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhc
Confidence 255788888888764
No 364
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=34.72 E-value=51 Score=34.16 Aligned_cols=63 Identities=16% Similarity=0.099 Sum_probs=42.5
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....+|+|....+++ ..+++.+.|.+.+.|++.|++.++-.+.++.+|+ ..|..+.|++|..
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G~~~~l~vDan 198 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVPAGSKVMIDPN 198 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSCTTCEEEEECT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhCCCCeEEEECC
Confidence 4456666654222444 4567788999999999999888766666666664 4455566777764
No 365
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=34.64 E-value=66 Score=33.09 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=42.0
Q ss_pred CCceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 105 RRTKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 105 r~tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
.+.....|+|- .++| ..+++.++|.+.+.+++.|++.++-.++++.+|+ ..|..+.+++|..
T Consensus 133 ~~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g~~~~l~vDan 198 (378)
T 2qdd_A 133 TPVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLPDGHRVTFDVN 198 (378)
T ss_dssp CCEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCCTTCEEEEECT
T ss_pred CCCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhCCCCEEEEeCC
Confidence 34566678764 2344 3566788999999999999877666666666664 3454566666653
No 366
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=34.32 E-value=85 Score=30.24 Aligned_cols=56 Identities=16% Similarity=0.171 Sum_probs=41.7
Q ss_pred hHHH-HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCCCCCCCChHHHHHHHHHH
Q 007936 368 VPSA-QQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGESAMGQFPDKALTVLRSV 443 (584)
Q Consensus 368 V~~~-Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ETa~G~yPveaV~~m~~I 443 (584)
...+ -...++.++++|++|.+.|- + +..++.. ++..|+|+|+- .||..+.+++...
T Consensus 178 ~~~~~~~~~v~~~~~~G~~v~~wTv------n-------~~~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~ 235 (248)
T 1zcc_A 178 PAQMRRPGIIEASRKAGLEIMVYYG------G-------DDMAVHREIATSDVDYINL-------DRPDLFAAVRSGM 235 (248)
T ss_dssp HHHHHSHHHHHHHHHHTCEEEEECC------C-------CCHHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHCCCEEEEECC------C-------CHHHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHh
Confidence 3345 57899999999999999981 2 1245566 78889999875 4898888776644
No 367
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=34.29 E-value=38 Score=32.79 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=54.9
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIP 364 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~ 364 (584)
..-.+.+.+.|+|++.+|= ..++++..+|+.+ +.-+.+..-|=- ++ .+..+.++. +|.++|||+=+..+=|
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~-----~~~~~vtPGI~~-~g-~tp~~a~~~Gad~iVVGR~I~~A~dP 196 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDF-----EKMTIVSPGMGS-QG-GSYGDAVCAGADYEIIGRSIYNAGNP 196 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHC-----TTCEEEECCBST-TS-BCTTHHHHHTCSEEEECHHHHTSSSH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhC-----CCCEEEcCCccc-Cc-cCHHHHHHcCCCEEEECHHhcCCCCH
Confidence 4455677889999998875 4468899998876 222334444522 22 156555555 9999999998888777
Q ss_pred CCChHHHHHHHHH
Q 007936 365 LEQVPSAQQKIVQ 377 (584)
Q Consensus 365 ~e~V~~~Qk~II~ 377 (584)
.+..-.+++.|-+
T Consensus 197 ~~aa~~i~~~i~~ 209 (222)
T 4dbe_A 197 LTALRTINKIIED 209 (222)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6555555544433
No 368
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=34.15 E-value=63 Score=31.90 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=33.2
Q ss_pred CHHHHHHHHH-hcCCEEEEeCCCC------CHHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 119 GFEQLEALAV-GGMNVARINMCHG------TREWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 119 ~~e~l~~li~-~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+.| +.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--l~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG--LYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT--CEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 4688999986 7999999987642 22223344444444455555 667888753
No 369
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=34.09 E-value=59 Score=31.48 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHH
Q 007936 372 QQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLR 441 (584)
Q Consensus 372 Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~ 441 (584)
-+..++.|+++|++|.+.|- -+..++..++..|+|+|+- .||..+.+++.
T Consensus 199 ~~~~v~~~~~~G~~v~~WTv-------------n~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 199 DVQQVSDIKAAGYKVLAFTI-------------NDESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp CHHHHHHHHHTTCEEEEECC-------------CCHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC-------------CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 36789999999999999971 1234567788899999986 58988877764
No 370
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=33.94 E-value=4.1e+02 Score=28.46 Aligned_cols=152 Identities=13% Similarity=0.061 Sum_probs=94.2
Q ss_pred CCCccCHhhhHHh-HhcCCCEEEEcC----CC-----CHHHHHHHHHHHHhhcCCCCceEEEeec--CHHHH--------
Q 007936 280 TISPKDWLDIDFG-ITEGVDFIAISF----VK-----SAEVINHLKSYIAARSRDSDIAVIAKIE--SIDSL-------- 339 (584)
Q Consensus 280 ~lt~kD~~dI~~a-l~~gvD~I~lSf----V~-----saedV~~lr~~l~~~~~~~~i~IiAKIE--t~~av-------- 339 (584)
.++..|+..|... .+.|++.|=+-+ +. ++++.+.++.+.+. ..++++.+-+= +.-|.
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~---~~~~~l~~l~R~~N~~G~~~~~ddv~ 102 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA---MPNTPLQMLLRGQNLLGYRHYADDVV 102 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH---CSSSCEEEEECGGGTTSSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh---CCCCeEEEEeccccccCcccccchhh
Confidence 4666776666544 467999988853 11 45555555554421 12345554442 22232
Q ss_pred -hcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHc
Q 007936 340 -KNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQ 416 (584)
Q Consensus 340 -~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~ 416 (584)
.+++..++. .|.|-|. ....++ .-.+..++.++++|+.|.++= +|...+.-+...+.+++. +...
T Consensus 103 ~~~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHC
Confidence 234444444 6755542 122233 345678999999999986541 344444446677777766 6678
Q ss_pred ccceEeecCCCCCCCChHHHHHHHHHHHHHH
Q 007936 417 RADALMLSGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 417 G~D~imLs~ETa~G~yPveaV~~m~~I~~~a 447 (584)
|+|.|.|. +|+=+-.|.++-+.++.+..+.
T Consensus 171 Gad~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 171 GVDSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp TCSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 99999997 7888888999999888887654
No 371
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=33.92 E-value=38 Score=30.75 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=41.6
Q ss_pred EeeCCCEEEEeecc--cCC-CCCCCEEEecccchhc---ccCCCCEEEEeCCeeEEEEEEEeCCeEEE
Q 007936 187 RAEDGEIWTFTVRA--FDS-PRPERTITVNYDGFAE---DVKVGDELLVDGGMVRFEVIEKIGPDVKC 248 (584)
Q Consensus 187 ~l~~G~~v~~t~~~--~~~-~~~~~~i~v~~~~~~~---~v~vGd~I~idDG~i~l~V~~~~~~~i~c 248 (584)
-++.|++++|+... -.+ ..++....++...|.. .+++|+.+.+.+ ....|+++.++.+..
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~v 129 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVTL 129 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEEE
Confidence 36789988888762 122 2333444566666654 488999999887 777899999887653
No 372
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=33.80 E-value=90 Score=32.95 Aligned_cols=61 Identities=23% Similarity=0.350 Sum_probs=45.7
Q ss_pred ceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEeh
Q 007936 327 IAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVAS 390 (584)
Q Consensus 327 i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivAT 390 (584)
-.+.+-||-..-.-+||+.++-+|-|+-|-|=+=.+.-.-++|. .+.+.|+++|+|||.-.
T Consensus 266 a~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPviaia 326 (383)
T 3cwc_A 266 AQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIGIA 326 (383)
T ss_dssp CEEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEEEE
T ss_pred CEEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEEEe
Confidence 45777778888888999999999999999887755555556654 56678999999998643
No 373
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=33.61 E-value=1.7e+02 Score=30.38 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=0.0
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEE-------------cCCCCHHH----------------HHHHHHHHHhhcC
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAI-------------SFVKSAEV----------------INHLKSYIAARSR 323 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~l-------------SfV~saed----------------V~~lr~~l~~~~~ 323 (584)
||..|++++ +.+.+.|+|+|=+ |..+...| |+.+|+.+
T Consensus 157 mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av----- 231 (376)
T 1icp_A 157 LTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI----- 231 (376)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHh-----
Q ss_pred CCCceEEEee---------cCHHHHhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 324 DSDIAVIAKI---------ESIDSLKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 324 ~~~i~IiAKI---------Et~~av~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+.+ .|..|| .....++...++++. .|.|=+.-|.....-+ -......+-...+..+.|||..
T Consensus 232 g~~-~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~---~~~~~~~~~~vr~~~~iPvi~~ 307 (376)
T 1icp_A 232 GSD-RVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWE---KIECTESLVPMRKAYKGTFIVA 307 (376)
T ss_dssp CGG-GEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------CCCCSHHHHHHCCSCEEEE
T ss_pred cCC-ceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCC---ccccHHHHHHHHHHcCCCEEEe
Q ss_pred hhhhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 390 SQLLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 390 TqmLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
... + ..+...++..| +|+|++.
T Consensus 308 ---------G~i-~---~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 308 ---------GGY-D---REDGNRALIEDRADLVAYG 330 (376)
T ss_dssp ---------SSC-C---HHHHHHHHHTTSCSEEEES
T ss_pred ---------CCC-C---HHHHHHHHHCCCCcEEeec
No 374
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=33.58 E-value=3.8e+02 Score=27.63 Aligned_cols=114 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEE-------------cCCCC----------------HHHHHHHHHHHHhhcC
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAI-------------SFVKS----------------AEVINHLKSYIAARSR 323 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~l-------------SfV~s----------------aedV~~lr~~l~~~~~ 323 (584)
||..|++.+ +.+.+.|+|+|=+ |.++. .+-|+.+|+.+
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~v----- 217 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVW----- 217 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhc-----
Q ss_pred CCCceEEEeecCH---------HHHhcHHHHHHh-----CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 324 DSDIAVIAKIESI---------DSLKNLEEIILA-----SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 324 ~~~i~IiAKIEt~---------~av~NldeIl~~-----sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+.+ .|..||=-- ..+++..++++. +|.|=+..|..+. ..+-...+..++|||..
T Consensus 218 g~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-----------~~~~~ik~~~~iPvi~~ 285 (362)
T 4ab4_A 218 GAQ-RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADD-----------SIGPLIKEAFGGPYIVN 285 (362)
T ss_dssp CGG-GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTT-----------CCHHHHHHHHCSCEEEE
T ss_pred CCC-ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCH-----------HHHHHHHHHCCCCEEEe
Q ss_pred hhhhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 390 SQLLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 390 TqmLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
... |.. +...++..| +|+|++.
T Consensus 286 ---------Ggi-t~e---~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 286 ---------ERF-DKA---SANAALASGKADAVAFG 308 (362)
T ss_dssp ---------SSC-CHH---HHHHHHHTTSCSEEEES
T ss_pred ---------CCC-CHH---HHHHHHHcCCccEEEEC
No 375
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=33.46 E-value=3.8e+02 Score=26.89 Aligned_cols=146 Identities=10% Similarity=0.009 Sum_probs=0.0
Q ss_pred hhHHhHhcCCCEEEEcCCCCH--------HHHHHHHHHHHhhcCCCCceEEE-----eecCHHHH-hcHHHHHHh-----
Q 007936 288 DIDFGITEGVDFIAISFVKSA--------EVINHLKSYIAARSRDSDIAVIA-----KIESIDSL-KNLEEIILA----- 348 (584)
Q Consensus 288 dI~~al~~gvD~I~lSfV~sa--------edV~~lr~~l~~~~~~~~i~IiA-----KIEt~~av-~NldeIl~~----- 348 (584)
.++.+++.|+|+|-+--.-.. +.+.++.+.+ ...+-.+.+.. .+.....- +.+.+-++.
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~--~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lG 190 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELC--HSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSG 190 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHH--HTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHH--HHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcC
Q ss_pred CCEEEEeC-CcccccCCCCChHHHHHHHHHHHHHcCCC-eEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCC
Q 007936 349 SDGAMVAR-GDLGAQIPLEQVPSAQQKIVQLCRQLNKP-VIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGE 426 (584)
Q Consensus 349 sDGImIaR-GDLg~ei~~e~V~~~Qk~II~~c~~~gKP-vivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~E 426 (584)
+|.+=+.. .| +........+.+-......+.| |+++ ...+...=...+..++..|++++..-.-
T Consensus 191 aD~iKv~~~~~-----~~g~~~~~~~vv~~~~~~~~~P~Vv~a---------GG~~~~~~~~~~~~a~~aGa~Gv~vGRa 256 (304)
T 1to3_A 191 ADLYKVEMPLY-----GKGARSDLLTASQRLNGHINMPWVILS---------SGVDEKLFPRAVRVAMEAGASGFLAGRA 256 (304)
T ss_dssp CSEEEECCGGG-----GCSCHHHHHHHHHHHHHTCCSCEEECC---------TTSCTTTHHHHHHHHHHTTCCEEEESHH
T ss_pred CCEEEeCCCcC-----CCCCHHHHHHHHHhccccCCCCeEEEe---------cCCCHHHHHHHHHHHHHcCCeEEEEehH
Q ss_pred CCCC----CChHHHH--------HHHHHHHHHHhh
Q 007936 427 SAMG----QFPDKAL--------TVLRSVSLRIEK 449 (584)
Q Consensus 427 Ta~G----~yPveaV--------~~m~~I~~~aE~ 449 (584)
+.-- ..|.+++ +.|+.++.+..+
T Consensus 257 I~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~ 291 (304)
T 1to3_A 257 VWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMG 291 (304)
T ss_dssp HHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCC
No 376
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.26 E-value=2.6e+02 Score=27.89 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=72.7
Q ss_pred CHhhhHH-hHhcCCCEEEE-----cCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHh---cHHHHHHh-CCEEEE
Q 007936 285 DWLDIDF-GITEGVDFIAI-----SFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLK---NLEEIILA-SDGAMV 354 (584)
Q Consensus 285 D~~dI~~-al~~gvD~I~l-----SfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~---NldeIl~~-sDGImI 354 (584)
|..++.. ..+.|+++|-+ -|=.+.+++.++++.. +++|+.|= .+- .+++.... +|+|++
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-------~lPVl~Kd----fi~d~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-------SLPALRKD----FLFDPYQVYEARSWGADCILI 148 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-------SSCEEEES----CCCSTHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-------CCCEEECC----ccCCHHHHHHHHHcCCCEEEE
Confidence 4555544 35678999987 3558999999998754 36777661 111 25555444 899999
Q ss_pred eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 355 ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 355 aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
.-.+| + +.--+.++..|+..|.-+++-++ +. .++..|...|+|.|-.++
T Consensus 149 i~a~L----~----~~~l~~l~~~a~~lGl~~lvevh-----------~~---eEl~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 149 IMASV----D----DDLAKELEDTAFALGMDALIEVH-----------DE---AEMERALKLSSRLLGVNN 197 (272)
T ss_dssp ETTTS----C----HHHHHHHHHHHHHTTCEEEEEEC-----------SH---HHHHHHTTSCCSEEEEEC
T ss_pred ccccc----C----HHHHHHHHHHHHHcCCeEEEEeC-----------CH---HHHHHHHhcCCCEEEECC
Confidence 86665 1 23456788999999998887542 33 345667789999886653
No 377
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=33.25 E-value=52 Score=29.10 Aligned_cols=44 Identities=14% Similarity=0.347 Sum_probs=32.2
Q ss_pred HHHHHHHHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEEcCch
Q 007936 478 CNSAAKMANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAFTSTT 522 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiavT~~~ 522 (584)
+...++.|.+.++++||+-++ -|+++..+.+.-| |||+.+-+..
T Consensus 113 ~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv~~~~ 165 (175)
T 2gm3_A 113 KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTIKRNA 165 (175)
T ss_dssp HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEEECCG
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEEcCCc
Confidence 344567788889999999876 2567777777765 9999987653
No 378
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=33.20 E-value=2.1e+02 Score=28.43 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=50.8
Q ss_pred CCEEEEeC-CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH-HHHHcccceEeecCC
Q 007936 349 SDGAMVAR-GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS-EAVRQRADALMLSGE 426 (584)
Q Consensus 349 sDGImIaR-GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~-nav~~G~D~imLs~E 426 (584)
+||+++.= --=+..+..++-..+-+..++.++ -..|||+-| ...+-.|..+.+ .|-..|+|++|+..=
T Consensus 42 v~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 42 TDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 79999841 111122333333333334444332 247888764 244555655544 467789999999743
Q ss_pred CCCCCChHHHHHHHHHHHHHHh
Q 007936 427 SAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I~~~aE 448 (584)
--...-+.+.++..+.|+..+.
T Consensus 112 ~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 112 YYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCC
Confidence 3233334667778888876664
No 379
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.19 E-value=97 Score=32.33 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=54.4
Q ss_pred hhhHHhHhcCCCEEEEcC------CCCHHHHHHHHHHHHhhcCCCCceEEEee---cCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 287 LDIDFGITEGVDFIAISF------VKSAEVINHLKSYIAARSRDSDIAVIAKI---ESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSf------V~saedV~~lr~~l~~~~~~~~i~IiAKI---Et~~av~NldeIl~~-sDGImIaR 356 (584)
+.++|-++.|+|+|++.= -=|.++=.++.+... +..+.++.||+-+ -|.++++....-.+. +||+|+-+
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~v-e~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTV-NCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHH-HHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHH-HHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345678899999998832 223344333333332 1224568999977 356666666555555 89999875
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
-.+.- .+.+.+...-+.|.+ + .|+++-
T Consensus 163 PyY~k-~sq~gl~~hf~~IA~---a--~PiilY 189 (360)
T 4dpp_A 163 PYYGK-TSIEGLIAHFQSVLH---M--GPTIIY 189 (360)
T ss_dssp CCSSC-CCHHHHHHHHHTTGG---G--SCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHH---h--CCEEEE
Confidence 44321 122334444444433 1 588764
No 380
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=33.13 E-value=1e+02 Score=32.02 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=23.7
Q ss_pred HcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 381 QLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 381 ~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
..+.|||...- .- --.|+..++..|+|++++..
T Consensus 276 ~~~~pVia~GG---------I~---~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 276 KTGKPVLIDSG---------FR---RGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp HHCSCEEECSS---------CC---SHHHHHHHHHTTCSCEEESH
T ss_pred HcCCeEEEECC---------CC---CHHHHHHHHHhCCcHhhehH
Confidence 44669887532 22 23688899999999999974
No 381
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=32.95 E-value=40 Score=29.23 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=30.1
Q ss_pred HHHHHHH-HhhcCCcEEEEccCC--------chHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAKM-ANNLEVDALFVYTKT--------GHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~~-A~~l~a~aIvv~T~s--------G~tA~~lSr~RP~~PIiav 518 (584)
+...++. |.+.++++||+-++. |+++..+.+.- .|||+.+
T Consensus 107 ~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a-~~PVlvV 155 (156)
T 3fg9_A 107 DDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKA-PISVIVV 155 (156)
T ss_dssp HHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHC-SSEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhC-CCCEEEe
Confidence 3444666 788899999998862 77888887764 4999875
No 382
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=32.90 E-value=3e+02 Score=27.34 Aligned_cols=111 Identities=7% Similarity=0.042 Sum_probs=65.5
Q ss_pred HHHHHHHHHcccceEeecCCCC-------CCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCC-CCCCCCcChHHHHH
Q 007936 407 VADVSEAVRQRADALMLSGESA-------MGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPD-VGSSFAESISEEIC 478 (584)
Q Consensus 407 v~Dv~nav~~G~D~imLs~ETa-------~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ia 478 (584)
..|+-.|+..|+|.+++..-++ .++=..|.++.+..+++.+-+.-.. . + ..... ...+.........+
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~-V--~-~~l~~~~~~e~~~~~~~~~~ 161 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR-V--R-GYISCVLGCPYDGDVDPRQV 161 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE-E--E-EEEECTTCBTTTBCCCHHHH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-E--E-EEEEEEeeCCcCCCCCHHHH
Confidence 4688889999999999854332 4556778888888887766542110 0 0 00000 00000011122345
Q ss_pred HHHHHHHhhcCCcEEEEccCCchH-----HHHHhccC---CCCcEEEEcCc
Q 007936 479 NSAAKMANNLEVDALFVYTKTGHM-----ASLLSRCR---PDCPIFAFTST 521 (584)
Q Consensus 479 ~sav~~A~~l~a~aIvv~T~sG~t-----A~~lSr~R---P~~PIiavT~~ 521 (584)
...++.+.+.+++.|.+.+..|.. ..++...| |.+||-.-++|
T Consensus 162 ~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn 212 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHD 212 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 566677778899999998888853 45555555 44567666654
No 383
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=32.90 E-value=1e+02 Score=30.33 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=42.5
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEeCCeEEEEEEcCceeCCC--ceeeeccCCcccCCccccCCCCCccCHhhhHHhHhc
Q 007936 221 VKVGDELLVDGG---MVRFEVIEKIGPDVKCRCTDPGLLLPR--ANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITE 295 (584)
Q Consensus 221 v~vGd~I~idDG---~i~l~V~~~~~~~i~c~v~~~G~l~s~--Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~ 295 (584)
+++||.|.+-|| ....+|.+++++.+.+++...-..... -.|. + ...+|. .++...-|+.+.+.
T Consensus 36 l~~Gd~v~l~dg~g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~l~-------L---~~al~K-~~r~e~ilqkatEL 104 (257)
T 1vhy_A 36 MTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKIH-------L---GQVISR-GERMEFTIQKSVEL 104 (257)
T ss_dssp CCTTCEEEEECSSSEEEEEEEEEECSSCEEEEECCCEECCCCCSSCEE-------E---EEEC-----CCHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCEEEEEEEEeeCCeEEEEEEEEecccCCCCceEE-------E---EEecCc-hHHHHHHHHHHHhh
Confidence 688999998776 356678888888888877653221111 1121 1 122343 45666678899999
Q ss_pred CCCEEE
Q 007936 296 GVDFIA 301 (584)
Q Consensus 296 gvD~I~ 301 (584)
||+-|.
T Consensus 105 Gv~~I~ 110 (257)
T 1vhy_A 105 GVNVIT 110 (257)
T ss_dssp TCCEEE
T ss_pred CcCEEE
Confidence 999644
No 384
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=32.88 E-value=1.6e+02 Score=24.14 Aligned_cols=76 Identities=8% Similarity=0.045 Sum_probs=44.3
Q ss_pred HHHHHhhcCCcEEEEcc----CCchH-HHHHhc--cCCCCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHH---HH
Q 007936 481 AAKMANNLEVDALFVYT----KTGHM-ASLLSR--CRPDCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMES---NL 549 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T----~sG~t-A~~lSr--~RP~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~---~i 549 (584)
|.+...+...++|++=. .+|.. .+.+.+ ..|.+|||++|....... .-.+..|+.-++.... +.++ .+
T Consensus 43 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~-~~~~l~~~i 121 (142)
T 3cg4_A 43 CIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPF-DNEDLIEKT 121 (142)
T ss_dssp HHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSC-CHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCC-CHHHHHHHH
Confidence 34444555677777643 24432 355555 678999999998754332 2335678888877643 3333 44
Q ss_pred HHHHHHHH
Q 007936 550 NRTFSLLK 557 (584)
Q Consensus 550 ~~~~~~~k 557 (584)
+.++...+
T Consensus 122 ~~~~~~~~ 129 (142)
T 3cg4_A 122 TFFMGFVR 129 (142)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 44444443
No 385
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=32.68 E-value=1.1e+02 Score=31.89 Aligned_cols=122 Identities=11% Similarity=0.178 Sum_probs=70.6
Q ss_pred HHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhh
Q 007936 373 QKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWR 452 (584)
Q Consensus 373 k~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 452 (584)
.-+...|+..|.++++- .|..+....+...-..|++.+...+ .| -++++...+++.+- .+
T Consensus 125 ~a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~~~~~~-g~-- 184 (398)
T 4d9i_A 125 RGVAWAAQQLGQNAVIY-----------MPKGSAQERVDAILNLGAECIVTDM-----NY-DDTVRLTMQHAQQH-GW-- 184 (398)
T ss_dssp HHHHHHHHHHTCEEEEE-----------ECTTCCHHHHHHHHTTTCEEEECSS-----CH-HHHHHHHHHHHHHH-TC--
T ss_pred HHHHHHHHHcCCCEEEE-----------EeCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHHc-CC--
Confidence 35667899999998876 2333333445556678999876653 23 46666555543321 11
Q ss_pred hhhhhhcccCCCC-CCCCC---cChHHHHHHHHHHHHhhcC-----CcEEEEccCCchHHHHHhcc------CCCCcEEE
Q 007936 453 EEKRHEAMELPDV-GSSFA---ESISEEICNSAAKMANNLE-----VDALFVYTKTGHMASLLSRC------RPDCPIFA 517 (584)
Q Consensus 453 ~~~~~~~~~~~~~-~~~~~---~~~~~~ia~sav~~A~~l~-----a~aIvv~T~sG~tA~~lSr~------RP~~PIia 517 (584)
+...+. ..... ..........+.++.++++ .++||+.+-+|.++.-++++ .|.+.|++
T Consensus 185 -------~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vig 257 (398)
T 4d9i_A 185 -------EVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSII 257 (398)
T ss_dssp -------EECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred -------EEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 111110 00011 1122223344456665553 68999999999998776654 37788999
Q ss_pred EcCc
Q 007936 518 FTST 521 (584)
Q Consensus 518 vT~~ 521 (584)
|-+.
T Consensus 258 Vep~ 261 (398)
T 4d9i_A 258 VEPD 261 (398)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9764
No 386
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=32.46 E-value=86 Score=30.81 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=43.9
Q ss_pred cCCCCEEEEeCCe---eEEEEEEEeCCeEEEEEEcCceeCC--CceeeeccCCcccCCccccCCCCCccCHhhhHHhHhc
Q 007936 221 VKVGDELLVDGGM---VRFEVIEKIGPDVKCRCTDPGLLLP--RANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITE 295 (584)
Q Consensus 221 v~vGd~I~idDG~---i~l~V~~~~~~~i~c~v~~~G~l~s--~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~ 295 (584)
+++||.|.+-||. ...+|.+++.+.+.+++...-.... ...+. + -..+|. .++-..-|+.+.++
T Consensus 34 ~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~-------L---~~al~K-~~r~e~ilqkatEL 102 (251)
T 4e8b_A 34 MGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIH-------L---GQVMSR-GEKMEFTIQKSIEL 102 (251)
T ss_dssp CCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEE-------E---EEECCS-SSHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceEE-------E---EEEeec-hhHHHHHHHHHHhh
Confidence 6789999987653 5677888888888887764322111 11222 1 112322 33444566889999
Q ss_pred CCCEEEE
Q 007936 296 GVDFIAI 302 (584)
Q Consensus 296 gvD~I~l 302 (584)
||+-|..
T Consensus 103 Gv~~I~p 109 (251)
T 4e8b_A 103 GVSLITP 109 (251)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9997653
No 387
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=32.28 E-value=2e+02 Score=23.25 Aligned_cols=76 Identities=9% Similarity=-0.045 Sum_probs=42.4
Q ss_pred HHHHHhhcCCcEEEEccC----CchHH-HHHhcc--CCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHHHHHHH
Q 007936 481 AAKMANNLEVDALFVYTK----TGHMA-SLLSRC--RPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESNLNRTF 553 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T~----sG~tA-~~lSr~--RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~i~~~~ 553 (584)
|.+...+...++|++=.. +|... +.+.+. .|.+|||++|........-.+..|+.-++.+. .+.++......
T Consensus 39 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP-~~~~~l~~~i~ 117 (133)
T 3nhm_A 39 GLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKP-VKPPVLIAQLH 117 (133)
T ss_dssp HHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESS-CCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEecc-CCHHHHHHHHH
Confidence 344455567887777432 34332 344443 46899999998755544556778888887764 34455444333
Q ss_pred HHHH
Q 007936 554 SLLK 557 (584)
Q Consensus 554 ~~~k 557 (584)
..+.
T Consensus 118 ~~l~ 121 (133)
T 3nhm_A 118 ALLA 121 (133)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 3333
No 388
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=32.21 E-value=1.1e+02 Score=31.92 Aligned_cols=57 Identities=9% Similarity=0.045 Sum_probs=32.9
Q ss_pred CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCC--CChHHHHHHHHHHHHHHhhhh
Q 007936 383 NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMG--QFPDKALTVLRSVSLRIEKWW 451 (584)
Q Consensus 383 gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G--~yPveaV~~m~~I~~~aE~~~ 451 (584)
..|+|.... .-+ -.|+..++..|||++|+..---.+ .-|....+++..+..+.+.++
T Consensus 267 ~ipvia~GG---------I~~---~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m 325 (368)
T 3vkj_A 267 DSFLVGSGG---------IRS---GLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAM 325 (368)
T ss_dssp TCEEEEESS---------CCS---HHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECC---------CCC---HHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 378886533 222 368899999999999997421100 012333345555555555543
No 389
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=32.20 E-value=3.4e+02 Score=27.21 Aligned_cols=110 Identities=19% Similarity=0.084 Sum_probs=61.5
Q ss_pred CHhhhHHhHhcCC-CEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee--cCHHHHhcHHHHHHh-CCEEEEeCCccc
Q 007936 285 DWLDIDFGITEGV-DFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI--ESIDSLKNLEEIILA-SDGAMVARGDLG 360 (584)
Q Consensus 285 D~~dI~~al~~gv-D~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI--Et~~av~NldeIl~~-sDGImIaRGDLg 360 (584)
+.+....+.+.|. .+|...++ +++.+.+..+.++.. .+ ..+...+ -++.--+.++...+. .|+|.++-|.
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~-~~--~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~-- 98 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSL-TD--KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN-- 98 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHH-CC--SCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC--
T ss_pred cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHh-cC--CCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC--
Confidence 4566666777786 66666665 566655544444321 11 1222332 122212223333333 7999987542
Q ss_pred ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 361 AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 361 ~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
| ..+++.+++.|.|+++-. .+. .++..+...|+|++.+++
T Consensus 99 ---p--------~~~i~~l~~~g~~v~~~v-----------~~~---~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 99 ---P--------SKYMERFHEAGIIVIPVV-----------PSV---ALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp ---G--------GGTHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEEC
T ss_pred ---h--------HHHHHHHHHcCCeEEEEe-----------CCH---HHHHHHHHcCCCEEEEEC
Confidence 3 235667777899998642 222 234456778999999965
No 390
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=32.15 E-value=66 Score=31.70 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=57.6
Q ss_pred CHh-hhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee--------cCHHHHhcHHHHHHhCCEEEEe
Q 007936 285 DWL-DIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI--------ESIDSLKNLEEIILASDGAMVA 355 (584)
Q Consensus 285 D~~-dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI--------Et~~av~NldeIl~~sDGImIa 355 (584)
|.+ -++.+.+.|++.+++ -.+.++...+.++.+. ...|++-+ +..+-++.|++.+... +|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~-----~~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~----va 83 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAG-----RPHVWTALGFHPEVVSERAADLPWFDRYLPET----RF 83 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTT-----CTTEEECBCCCGGGTTTTGGGTHHHHHHGGGC----SE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHh-----CCCeEEEEeeCcccccccHHHHHHHHHHhhhc----cE
Confidence 544 457788999998776 3577888877776631 11233322 2223344455555332 34
Q ss_pred CCcccccCCCC--ChHHHHH----HHHHHHHHcCCCeE-Eeh
Q 007936 356 RGDLGAQIPLE--QVPSAQQ----KIVQLCRQLNKPVI-VAS 390 (584)
Q Consensus 356 RGDLg~ei~~e--~V~~~Qk----~II~~c~~~gKPvi-vAT 390 (584)
=|.-|.+.-.. .-...|+ +.++.|++.++||+ +.|
T Consensus 84 IGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~ 125 (254)
T 3gg7_A 84 VGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHS 125 (254)
T ss_dssp EEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 46666666432 2345665 56778999999999 986
No 391
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=32.14 E-value=1.8e+02 Score=30.30 Aligned_cols=63 Identities=16% Similarity=0.110 Sum_probs=41.8
Q ss_pred CceEEEec-CCCCCCHHHH-----HHHHHhcCCEEEEeCCCC------CHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTI-GPATCGFEQL-----EALAVGGMNVARINMCHG------TREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~Ti-GPa~~~~e~l-----~~li~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+...-+|+ |.-..++|.+ +++++.|.+.+.+..... +.++-.+.++.+|+ ..|..+.|++|..
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~---a~g~~~~l~vDaN 199 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRE---LLGPDAVIGFDAN 199 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHH---HHCTTCCEEEECT
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHH---HhCCCCeEEEECC
Confidence 55677887 3433456655 666788999999999653 55655555555554 4565677777764
No 392
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=32.05 E-value=74 Score=31.73 Aligned_cols=52 Identities=15% Similarity=0.077 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 120 FEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
.+..++|++.|+++.=+|+-....|+..++..-|+.+.+..+ +.|.+|+.=|
T Consensus 37 ~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~--~pisIDT~~~ 88 (271)
T 2yci_X 37 QEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD--LPCCLDSTNP 88 (271)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC--CCEEEECSCH
T ss_pred HHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC--CeEEEeCCCH
Confidence 345788999999999999977777888888888888877754 5567788643
No 393
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=31.89 E-value=3.4e+02 Score=27.27 Aligned_cols=128 Identities=13% Similarity=0.171 Sum_probs=0.0
Q ss_pred CCccCHhhhHHhHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecC-------HHHH
Q 007936 281 ISPKDWLDIDFGITEGVDFIAIS--------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIES-------IDSL 339 (584)
Q Consensus 281 lt~kD~~dI~~al~~gvD~I~lS--------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt-------~~av 339 (584)
+|.+|..--+.+-+.|+|.|.+. .|.-.+-+...+... ..-....|++=++- .+++
T Consensus 39 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~---r~~~~~~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 39 LTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVV---RGAPHALVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp EECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHH---HHCTTSEEEEECCTTSSTTCHHHHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHH---hcCCCCeEEEECCCCcccCCHHHHH
Q ss_pred hcHHHHHH-h-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeE-------EehhhhHhhhcCCCCChhh--HH
Q 007936 340 KNLEEIIL-A-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVI-------VASQLLESMIEYPTPTRAE--VA 408 (584)
Q Consensus 340 ~NldeIl~-~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvi-------vATqmLeSMi~~p~PTrAE--v~ 408 (584)
+|.-.+++ . ++||-+-=| ..+...|+++.++|.||+ -..+.+.-..-..+..+++ +.
T Consensus 116 ~na~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~ 183 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIA 183 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHH
Q ss_pred HHHHHHHcccceEee
Q 007936 409 DVSEAVRQRADALML 423 (584)
Q Consensus 409 Dv~nav~~G~D~imL 423 (584)
|..-....|+|+++|
T Consensus 184 rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 184 DAIAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCcEEEE
No 394
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=31.81 E-value=43 Score=28.18 Aligned_cols=37 Identities=11% Similarity=0.192 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCcEEEEccCC--------chHHHHHhccCCCCcEEEE
Q 007936 479 NSAAKMANNLEVDALFVYTKT--------GHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 479 ~sav~~A~~l~a~aIvv~T~s--------G~tA~~lSr~RP~~PIiav 518 (584)
...++.|. ++++||+-++. |+++..+.+.-| |||+.+
T Consensus 93 ~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 93 EMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred HHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 33455565 99999998763 778888877665 999875
No 395
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=31.72 E-value=72 Score=30.40 Aligned_cols=65 Identities=12% Similarity=0.159 Sum_probs=39.9
Q ss_pred hhHHhHhcCCCEEEEc-----CCCCHHHHHHHHHHHHhhcCCCCceEEEe--ecCHHHHhcHHHHHHh-CCEEEEeCCcc
Q 007936 288 DIDFGITEGVDFIAIS-----FVKSAEVINHLKSYIAARSRDSDIAVIAK--IESIDSLKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 288 dI~~al~~gvD~I~lS-----fV~saedV~~lr~~l~~~~~~~~i~IiAK--IEt~~av~NldeIl~~-sDGImIaRGDL 359 (584)
.++...+.|+|+|.++ +......+..++++.+ . .++++++. |-+. +.+++.++. +|++++++..|
T Consensus 36 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~--~--~~iPvi~~Ggi~~~---~~~~~~~~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 36 AARAYDEAGADELVFLDISATHEERAILLDVVARVAE--R--VFIPLTVGGGVRSL---EDARKLLLSGADKVSVNSAAV 108 (252)
T ss_dssp HHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHT--T--CCSCEEEESSCCSH---HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHH--h--CCCCEEEECCcCCH---HHHHHHHHcCCCEEEEChHHH
Confidence 3455678899998775 3334455555665542 2 24666653 4333 345666655 89999997776
No 396
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=31.59 E-value=1.2e+02 Score=24.53 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=42.0
Q ss_pred HHHHHhhcCCcEEEEcc----CCchH-HHHHhcc--CCCCcEEEEcCchhhhcccccccccEEEEecCCCCHHHH
Q 007936 481 AAKMANNLEVDALFVYT----KTGHM-ASLLSRC--RPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSDDMESN 548 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T----~sG~t-A~~lSr~--RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~d~~~~ 548 (584)
|.+...+...++|++=. .+|.. .+.+-+. .|.+|||++|........-.+..|+.-++.+.. +.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~-~~~~L 112 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPI-DIASL 112 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSC-CHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCC-CHHHH
Confidence 44445556788777643 34433 3445555 689999999998766655557788887777543 44443
No 397
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=31.55 E-value=32 Score=34.99 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=0.0
Q ss_pred eecCHHHHhcHHHHHHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHH-cCCCeEEehhhhHhhhcCCCCChhhH--
Q 007936 332 KIESIDSLKNLEEIILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQ-LNKPVIVASQLLESMIEYPTPTRAEV-- 407 (584)
Q Consensus 332 KIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~-~gKPvivATqmLeSMi~~p~PTrAEv-- 407 (584)
|.-..++.+.++.+.+. .|+|||| +.+..........+++.+++ ...||++- |.
T Consensus 49 K~~~~~~~~~~~~~~~sGtDai~VG------S~~vt~~~~~~~~~v~~ik~~~~lPvil~----------------fPP~ 106 (286)
T 3vk5_A 49 KVPVTEAVEKAAELTRLGFAAVLLA------STDYESFESHMEPYVAAVKAATPLPVVLH----------------FPPR 106 (286)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEE------CSCCSSHHHHHHHHHHHHHHHCSSCEEEE----------------CCCB
T ss_pred CCCcHHHHHHHHHHHhcCCCEEEEc------cCCCCcchHHHHHHHHHHHHhCCCCEEEE----------------CCCC
Q ss_pred -HHHHHHHHcccceEee
Q 007936 408 -ADVSEAVRQRADALML 423 (584)
Q Consensus 408 -~Dv~nav~~G~D~imL 423 (584)
+++ +.+..|+|++++
T Consensus 107 ~g~~-~~i~~~aDa~l~ 122 (286)
T 3vk5_A 107 PGAG-FPVVRGADALLL 122 (286)
T ss_dssp TTTB-SCCCTTCSEEEE
T ss_pred CCCc-cccccCCCEEEE
No 398
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=31.48 E-value=1.7e+02 Score=29.64 Aligned_cols=67 Identities=18% Similarity=0.286 Sum_probs=47.0
Q ss_pred CceEEEecC--CCCCC-----------HHHHHHHHHhcCCEEEEeCCC--------CCHHHHHHHHHHHHHHHHHhCCce
Q 007936 106 RTKLVCTIG--PATCG-----------FEQLEALAVGGMNVARINMCH--------GTREWHRRVIERVRRLNEEKGFAV 164 (584)
Q Consensus 106 ~tKIi~TiG--Pa~~~-----------~e~l~~li~~Gm~v~RiN~sH--------g~~e~~~~~i~~ir~~~~e~~~~i 164 (584)
+++|++=+. |-|.+ .+..++|++.|+++.=||..- ...|+..+++..|+.+.++.+ +
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~--v 116 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK--L 116 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--S
T ss_pred CCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--c
Confidence 567777765 42221 346789999999999999843 126788888888888877665 4
Q ss_pred EEEeecCCCe
Q 007936 165 AIMMDTEGSE 174 (584)
Q Consensus 165 ~I~lDl~Gpk 174 (584)
.|.+|+.-|+
T Consensus 117 piSIDT~~~~ 126 (297)
T 1tx2_A 117 PISIDTYKAE 126 (297)
T ss_dssp CEEEECSCHH
T ss_pred eEEEeCCCHH
Confidence 5667886554
No 399
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=31.34 E-value=62 Score=32.41 Aligned_cols=63 Identities=24% Similarity=0.276 Sum_probs=40.2
Q ss_pred cCHhhhHHhHhcCCCEEEEc------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEEE
Q 007936 284 KDWLDIDFGITEGVDFIAIS------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGAM 353 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lS------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGIm 353 (584)
.|.+++++|++.|++.|.+. |--+.+.-.++...+ ..+..+|+ |+ |+.+-+++... +||++
T Consensus 161 h~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~i-----p~~~~~Vs--ES--GI~t~~dv~~l~~~G~~a~L 231 (258)
T 4a29_A 161 NDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMI-----PSNVVKVA--KL--GISERNEIEELRKLGVNAFL 231 (258)
T ss_dssp SSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTS-----CTTSEEEE--EE--SSCCHHHHHHHHHTTCCEEE
T ss_pred chHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhC-----CCCCEEEE--cC--CCCCHHHHHHHHHCCCCEEE
Confidence 57788899999999999875 444444444443333 34455665 22 66666665544 79999
Q ss_pred Ee
Q 007936 354 VA 355 (584)
Q Consensus 354 Ia 355 (584)
||
T Consensus 232 VG 233 (258)
T 4a29_A 232 IS 233 (258)
T ss_dssp EC
T ss_pred EC
Confidence 97
No 400
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.32 E-value=2e+02 Score=29.01 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=51.3
Q ss_pred CCEEEEeCCcc--cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH-HHHHcccceEeecC
Q 007936 349 SDGAMVARGDL--GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS-EAVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDL--g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~-nav~~G~D~imLs~ 425 (584)
+||+++. |=- +..+..++-..+.+..++.++ -..|||+-| ...+-+|..+.+ .|-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGT---------GANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 7999884 211 122333343334444444432 246888764 244455655544 46778999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33333335677888888877664
No 401
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=31.30 E-value=3.8e+02 Score=27.07 Aligned_cols=104 Identities=19% Similarity=0.230 Sum_probs=57.1
Q ss_pred CCCChhhHHHHHHHHHcccceEeecCCCC---CCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCCCCcChHHH
Q 007936 400 PTPTRAEVADVSEAVRQRADALMLSGESA---MGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGSSFAESISEE 476 (584)
Q Consensus 400 p~PTrAEv~Dv~nav~~G~D~imLs~ETa---~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (584)
..|+...+.++..|+.+|||-|=+--.-. .|+| ....+-+..+...+.... . ++-++.- ..+ .+.
T Consensus 122 ~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~-~~v~~eI~~V~~a~~~~~--l----KVIlEt~----~Lt-~ee 189 (288)
T 3oa3_A 122 TYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRY-TDVFQDIRAVRLAAKDAI--L----KVILETS----QLT-ADE 189 (288)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHTTTSE--E----EEECCGG----GCC-HHH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcH-HHHHHHHHHHHHHhcCCC--c----eEEEECC----CCC-HHH
Confidence 35677778999999999999986421111 1333 334444555554433210 0 0101100 011 244
Q ss_pred HHHHHHHHHhhcCCcEEEEccCCchH--------HHHHhcc----CCCCcEEEE
Q 007936 477 ICNSAAKMANNLEVDALFVYTKTGHM--------ASLLSRC----RPDCPIFAF 518 (584)
Q Consensus 477 ia~sav~~A~~l~a~aIvv~T~sG~t--------A~~lSr~----RP~~PIiav 518 (584)
+. .|+++|.+.+|+ ||=|.||.+ .+++.+. .+.+||.|-
T Consensus 190 i~-~A~~ia~eaGAD--fVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAA 240 (288)
T 3oa3_A 190 II-AGCVLSSLAGAD--YVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKAS 240 (288)
T ss_dssp HH-HHHHHHHHTTCS--EEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEE
T ss_pred HH-HHHHHHHHcCCC--EEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 54 489999999999 566666643 2333333 466777774
No 402
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=31.29 E-value=41 Score=35.16 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=36.6
Q ss_pred EEecCCCCCCHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 110 VCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 110 i~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
.+.+|-.....+.++.++++|++++=++.+||..+...++++++|+.
T Consensus 92 ~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 92 FVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp BEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 34455434457889999999999999999999887767777777764
No 403
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=31.19 E-value=4.2e+02 Score=26.63 Aligned_cols=116 Identities=14% Similarity=0.274 Sum_probs=69.7
Q ss_pred hhhHHhHhcCCCEEEEc---------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCH------HHHhcHHHH
Q 007936 287 LDIDFGITEGVDFIAIS---------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESI------DSLKNLEEI 345 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lS---------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~------~av~NldeI 345 (584)
+.++..++.|+++|-+= .+...+.+..++...+... +.+..|+++.|.. ++++.....
T Consensus 98 ~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~-~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 98 RTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT-DPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS-STTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc-CCCcEEEEecHHhhhcCHHHHHHHHHHH
Confidence 33445567788887752 2333466677777775432 4568999999975 234444444
Q ss_pred HHh-CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeec
Q 007936 346 ILA-SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 424 (584)
Q Consensus 346 l~~-sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs 424 (584)
.++ +|+|++- . +.. .+.+-+.|++..+|++. +|++. -..|.++..|..+ .|++.++..
T Consensus 177 ~eAGAd~i~~e-------~-~~~----~~~~~~i~~~~~iP~~~--N~~~~-g~~p~~~~~eL~~------~G~~~v~~~ 235 (295)
T 1xg4_A 177 VEAGAEMLFPE-------A-ITE----LAMYRQFADAVQVPILA--NITEF-GATPLFTTDELRS------AHVAMALYP 235 (295)
T ss_dssp HHTTCSEEEET-------T-CCS----HHHHHHHHHHHCSCBEE--ECCSS-SSSCCCCHHHHHH------TTCSEEEES
T ss_pred HHcCCCEEEEe-------C-CCC----HHHHHHHHHHcCCCEEE--Eeccc-CCCCCCCHHHHHH------cCCCEEEEC
Confidence 444 8999982 2 111 23344556677899875 33321 0346677766654 599988874
No 404
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=30.92 E-value=42 Score=32.94 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=32.8
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCCC--HHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 119 GFEQLEALAVGGMNVARINMCHGT--REWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 119 ~~e~l~~li~~Gm~v~RiN~sHg~--~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
+.+.++.|.+.|+|++|+-++.|. .+...+.++.+=+..++.| +.+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 467899999999999999876431 1112233333334444544 677888864
No 405
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=30.92 E-value=79 Score=32.79 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=42.6
Q ss_pred CceEEEecCCCCC-CHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATC-GFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~-~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....+|+|.... +++ ..+++.++|.+.+.|.+.|++.++-.++++.+|++ .|..+.|++|..
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---vg~d~~l~vDan 215 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKH---LGDAVPLMVDAN 215 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHH---HCTTSCEEEECT
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---cCCCCEEEEECC
Confidence 3445566543312 454 45677889999999999998877777777777764 455566677753
No 406
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=30.84 E-value=72 Score=31.75 Aligned_cols=52 Identities=17% Similarity=0.246 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhcCCEEEEeCCC---------CCH-HHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 118 CGFEQLEALAVGGMNVARINMCH---------GTR-EWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 118 ~~~e~l~~li~~Gm~v~RiN~sH---------g~~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
.+.+.++.|.+.|+|++||-++. |.. +...+.++.+=+...+.| +.+++|+-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G--i~vildlh 90 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--LGLVLDMH 90 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 34788999999999999998652 111 223333444434445555 66777764
No 407
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=30.81 E-value=46 Score=33.35 Aligned_cols=52 Identities=19% Similarity=0.326 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCEEEEeCCC-----CC----HH-----------HHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 120 FEQLEALAVGGMNVARINMCH-----GT----RE-----------WHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN~sH-----g~----~e-----------~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
.+.++.|.+.|+|++||-++. +. .+ ...+.++.+=+...+.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G--i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG--LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 678999999999999999863 11 00 03334444444445555 6778888654
No 408
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.80 E-value=2.5e+02 Score=28.11 Aligned_cols=89 Identities=15% Similarity=0.063 Sum_probs=51.0
Q ss_pred CCEEEEeCCcc--cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGDL--GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDL--g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+|||++. |=- +..+..++-..+-+..++.++ -..|||+-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 46 v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 46 IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHV---------GCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 7999885 211 122333343333344444432 247888764 2344456555444 6667999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 33223335667778888887765
No 409
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=30.78 E-value=1.9e+02 Score=32.46 Aligned_cols=131 Identities=18% Similarity=0.183 Sum_probs=66.1
Q ss_pred CCccCHhhh--------HHhHhcCCCEEEE-------------cCCCCHHH------------HHHHHHHHHhhcCCCCc
Q 007936 281 ISPKDWLDI--------DFGITEGVDFIAI-------------SFVKSAEV------------INHLKSYIAARSRDSDI 327 (584)
Q Consensus 281 lt~kD~~dI--------~~al~~gvD~I~l-------------SfV~saed------------V~~lr~~l~~~~~~~~i 327 (584)
||..|++.+ +.+.+.|+|+|=+ |..+...| +.++.+.++ +..+.+.
T Consensus 139 ~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr-~~vg~~~ 217 (729)
T 1o94_A 139 MDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVK-HAVGSDC 217 (729)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHH-HHHTTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHH-HHhCCCc
Confidence 566666555 4566789999877 33432222 333333332 1235567
Q ss_pred eEEEeec------------CHHHHhcHHHHHHhCCEEEEeCCcc---cc-cCCCCChH-HHHHHHHHHHH-HcCCCeEEe
Q 007936 328 AVIAKIE------------SIDSLKNLEEIILASDGAMVARGDL---GA-QIPLEQVP-SAQQKIVQLCR-QLNKPVIVA 389 (584)
Q Consensus 328 ~IiAKIE------------t~~av~NldeIl~~sDGImIaRGDL---g~-ei~~e~V~-~~Qk~II~~c~-~~gKPvivA 389 (584)
.|..||- ..++++-...+-+.+|.+=+.-|.+ .. ..+....+ ..+-..++..+ ..++|||..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 8999982 1233332222222368776665542 11 11110000 11223333333 358898865
Q ss_pred hhhhHhhhcCCCCChhhHHHHHHHHHcc-cceEeec
Q 007936 390 SQLLESMIEYPTPTRAEVADVSEAVRQR-ADALMLS 424 (584)
Q Consensus 390 TqmLeSMi~~p~PTrAEv~Dv~nav~~G-~D~imLs 424 (584)
-. .-|.. +...++..| +|+|++.
T Consensus 298 G~---------i~~~~---~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 GR---------YTDPE---KMIEIVTKGYADIIGCA 321 (729)
T ss_dssp SC---------CCCHH---HHHHHHHTTSCSBEEES
T ss_pred CC---------CCCHH---HHHHHHHCCCCCEEEeC
Confidence 32 22332 335677777 9999985
No 410
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=30.70 E-value=68 Score=28.14 Aligned_cols=40 Identities=13% Similarity=0.216 Sum_probs=30.9
Q ss_pred HHHHHHHHhhcCCcEEEEccC---------CchHHHHHhccCCCCcEEEE
Q 007936 478 CNSAAKMANNLEVDALFVYTK---------TGHMASLLSRCRPDCPIFAF 518 (584)
Q Consensus 478 a~sav~~A~~l~a~aIvv~T~---------sG~tA~~lSr~RP~~PIiav 518 (584)
+...++.|.+.++++||+-++ -|+++..+.+. -.|||+.+
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~-a~~PVLvV 154 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILK-ANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHH-CSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHh-CCCCEEEe
Confidence 445577888999999999765 37788888874 45999876
No 411
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=30.56 E-value=2.2e+02 Score=23.46 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=46.6
Q ss_pred HHHHHHhhcCCcEEEEccC----CchH-HHHHhc--cCCCCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHH---H
Q 007936 480 SAAKMANNLEVDALFVYTK----TGHM-ASLLSR--CRPDCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMES---N 548 (584)
Q Consensus 480 sav~~A~~l~a~aIvv~T~----sG~t-A~~lSr--~RP~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~---~ 548 (584)
.|.+...+...++|++-.. +|.. .+.+-+ ..|.+|||++|....... .-.+..|+.-++.+...+.++ .
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~ 121 (144)
T 3kht_A 42 KALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGR 121 (144)
T ss_dssp HHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHH
T ss_pred HHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHH
Confidence 3455556667888777543 3322 344555 568999999997643322 223567899888876534444 3
Q ss_pred HHHHHHHHHH
Q 007936 549 LNRTFSLLKA 558 (584)
Q Consensus 549 i~~~~~~~k~ 558 (584)
++.+++....
T Consensus 122 i~~~l~~~~~ 131 (144)
T 3kht_A 122 IYAIFSYWLT 131 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4445544333
No 412
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=30.48 E-value=46 Score=33.09 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=49.7
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEE-EeecCHHHHh--------cHHHHHHh-CCEEEEeCCcc
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVI-AKIESIDSLK--------NLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~Ii-AKIEt~~av~--------NldeIl~~-sDGImIaRGDL 359 (584)
+.+.+.|+|++.+| +.++..+|+.+ +.+..++ .=|-- ++-+ +..+.++. +|.+.+||+=+
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~-----g~~fl~VtPGIr~-qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~ 238 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHL-----GREFKLVTPGIRP-AGSEQGDQRRIMTPAQAIASGSDYLVIGRPIT 238 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHH-----CTTSEEEEECCCC-TTSTTSSCSSSCCHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhc-----CCCcEEEeCCccc-CcCCccceeccCCHHHHHHcCCCEEEECHHHh
Confidence 34567899999877 78999999887 3444444 56632 3333 57777766 99999999877
Q ss_pred cccCCCCChHHHHH
Q 007936 360 GAQIPLEQVPSAQQ 373 (584)
Q Consensus 360 g~ei~~e~V~~~Qk 373 (584)
+.+=|.+.+..+.+
T Consensus 239 ~a~dp~~a~~~i~~ 252 (255)
T 3ldv_A 239 QAAHPEVVLEEINS 252 (255)
T ss_dssp TCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 76655444433333
No 413
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=30.34 E-value=51 Score=32.98 Aligned_cols=55 Identities=16% Similarity=0.280 Sum_probs=41.2
Q ss_pred ceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehh
Q 007936 327 IAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQ 391 (584)
Q Consensus 327 i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATq 391 (584)
.++++ ++.+.++|+++.+|++.|+.|=|. ++........++.+++.++|+++---
T Consensus 42 sP~M~-----~~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDPV 96 (273)
T 3dzv_A 42 KPIMA-----DDPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDLV 96 (273)
T ss_dssp EEECC-----CCGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred chhhc-----CCHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEchh
Confidence 45665 236678899999999999988752 34455667777889999999998643
No 414
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=30.34 E-value=20 Score=37.92 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=30.7
Q ss_pred hcCCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCc
Q 007936 487 NLEVDALFVYTKTGHMASLLSR----CRPDCPIFAFTST 521 (584)
Q Consensus 487 ~l~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~ 521 (584)
...++.++|-|.+|+||..+|. ..|..+.+.+||-
T Consensus 226 ~~~~DGliVsTPTGSTAYslSAGGpIv~P~~~~~~ltPI 264 (388)
T 3afo_A 226 RTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPI 264 (388)
T ss_dssp EEEEEEEEEECTGGGGTHHHHTTCCEECTTSCEEEEEEE
T ss_pred eecCCeEEEeCCCcHHHHHHhccCCcccCCCCceEEeee
Confidence 4689999999999999999996 5788888998874
No 415
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=30.30 E-value=2.3e+02 Score=28.66 Aligned_cols=108 Identities=17% Similarity=0.156 Sum_probs=71.2
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcc
Q 007936 294 TEGVDFIAISFVKS--------------AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDL 359 (584)
Q Consensus 294 ~~gvD~I~lSfV~s--------------aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDL 359 (584)
+.+..+|+-+..+. .+-++.++++.++. .+.+++-+-..+.++-+ .+.+|.+-||-+++
T Consensus 49 ~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~----Glp~~Tev~d~~~v~~l---~~~vd~lqIgA~~~ 121 (285)
T 3sz8_A 49 KLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF----GVPVITDVHEAEQAAPV---AEIADVLQVPAFLA 121 (285)
T ss_dssp HHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH----CCCEEEECCSGGGHHHH---HTTCSEEEECGGGT
T ss_pred hheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc----CCeEEEEeCCHHHHHHH---HHhCCEEEECcccc
Confidence 35677777764432 46777888877432 37888888777666554 44589999986554
Q ss_pred cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH-cccceEeecCCC
Q 007936 360 GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVR-QRADALMLSGES 427 (584)
Q Consensus 360 g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~-~G~D~imLs~ET 427 (584)
...+ +++++-+.||||++.|.|. -|-.|+...++.+. .|.+=++|..-+
T Consensus 122 ------~n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg 171 (285)
T 3sz8_A 122 ------RQTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERG 171 (285)
T ss_dssp ------TCHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECC
T ss_pred ------CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 2222 5666668999999986543 35567766666654 477777775433
No 416
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=30.16 E-value=99 Score=31.57 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHhcCCEEEEeCCCCC---------H-HHHHHHHHHHHHHHHHhCCceEEEeecCCC
Q 007936 118 CGFEQLEALAVGGMNVARINMCHGT---------R-EWHRRVIERVRRLNEEKGFAVAIMMDTEGS 173 (584)
Q Consensus 118 ~~~e~l~~li~~Gm~v~RiN~sHg~---------~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~Gp 173 (584)
.+.+.++.|.+.|+|++||-++... . +...+.++.+=+...+. -+.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~--Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNE--GLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTT--TCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHC--CCEEEEECCCc
Confidence 3688999999999999999886421 0 12223333333333343 47788998753
No 417
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=30.13 E-value=2e+02 Score=22.59 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=39.0
Q ss_pred HHHHHhhcCCcEEEEcc----CCchH-HHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCC
Q 007936 481 AAKMANNLEVDALFVYT----KTGHM-ASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFS 542 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T----~sG~t-A~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~ 542 (584)
+.+...+...+.|++=. .+|.. .+.+.+..|.+||+.+|...... .-.+..|+.-++.+..
T Consensus 37 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~g~~~~l~Kp~ 102 (116)
T 3a10_A 37 ALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYR-SDMSSWAADEYVVKSF 102 (116)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGG-GCGGGGGSSEEEECCS
T ss_pred HHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchH-HHHHhccccceEECCC
Confidence 33444455678777643 34442 45566667999999999876655 3345678888877644
No 418
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=30.13 E-value=34 Score=33.04 Aligned_cols=80 Identities=10% Similarity=0.065 Sum_probs=51.6
Q ss_pred hhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEE-EeecCHHHHhcHHHHHHh-CCEEEEeCCcccccCC
Q 007936 287 LDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVI-AKIESIDSLKNLEEIILA-SDGAMVARGDLGAQIP 364 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~Ii-AKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei~ 364 (584)
.-.+.+.+.|+|++.+|= ..++++..+|+.+ +. ..++ .-|-- ++ .++.+.++. +|.+++||+=+..+=|
T Consensus 119 ~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~-----~~-f~~v~pGI~~-~g-~~~~~a~~~Gad~iVvGr~I~~a~dp 189 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPA-TRPSMISRVKGDF-----PD-KLVISPGVGT-QG-AKPGIALCHGADYEIVGRSVYQSADP 189 (215)
T ss_dssp HHHHHHHHHCCSEEECCT-TSHHHHHHHHHHC-----TT-SEEEECCTTS-TT-CCTTHHHHTTCSEEEECHHHHTSSSH
T ss_pred HHHHHHHHcCCCceeeCC-CCHHHHHHHHHhC-----CC-cEEEcCCCCc-Cc-CCHHHHHHcCCCEEEeCHHHcCCCCH
Confidence 344567789999988873 4478899888876 23 3333 44422 11 146566655 8999999998887766
Q ss_pred CCChHHHHHHH
Q 007936 365 LEQVPSAQQKI 375 (584)
Q Consensus 365 ~e~V~~~Qk~I 375 (584)
.+....+++.|
T Consensus 190 ~~a~~~i~~~i 200 (215)
T 3ve9_A 190 VRKLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 65444444443
No 419
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=30.10 E-value=2.2e+02 Score=23.16 Aligned_cols=53 Identities=25% Similarity=0.400 Sum_probs=41.7
Q ss_pred HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecCCCeE
Q 007936 122 QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTEGSEI 175 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~GpkI 175 (584)
.=+.|.++|..-..|..|--+.|+.+++++.+-++-+++|+. -|-+...|.++
T Consensus 38 lekalaragarnvqitisaendeqakelleliarllqklgyk-dinvrvngtev 90 (96)
T 2jvf_A 38 LEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGYK-DINVRVNGTEV 90 (96)
T ss_dssp HHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHHHHTCS-EEEEEEETTEE
T ss_pred HHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHHHhCCC-ceEEEEcCEEE
Confidence 345688999999999999999999999999999999999864 13333445444
No 420
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=29.98 E-value=2.5e+02 Score=28.40 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=70.4
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcc
Q 007936 294 TEGVDFIAISFVKS--------------AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDL 359 (584)
Q Consensus 294 ~~gvD~I~lSfV~s--------------aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDL 359 (584)
+.|+.+|+-+..+. .+-++.++++.++ ..+.+++-+-..+.++-+++ .+|.+-||-+++
T Consensus 46 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e----~Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~ 118 (288)
T 3tml_A 46 KLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQ----LGLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLC 118 (288)
T ss_dssp HHTCCEEEECBC--------------CHHHHHHHHHHHHHH----HCCCEEEECCSGGGHHHHHH---HCSEEEECGGGT
T ss_pred HcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHh----cCCeEEEEeCCHHHHHHHHH---hCCEEEECcccc
Confidence 45888888754442 3567777777742 24788888877777766655 489999986554
Q ss_pred cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH-ccc------ceEeecCCCC
Q 007936 360 GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVR-QRA------DALMLSGESA 428 (584)
Q Consensus 360 g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~-~G~------D~imLs~ETa 428 (584)
...+ +++.+-+.||||++.|.|. -|-.|+...++.+. .|. +=++|..-++
T Consensus 119 ------~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~ 175 (288)
T 3tml_A 119 ------RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACERGV 175 (288)
T ss_dssp ------TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE
T ss_pred ------cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC
Confidence 2333 3555668999999986542 35567766666664 465 5566654333
No 421
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=29.80 E-value=1.6e+02 Score=29.91 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=53.3
Q ss_pred hHHhHhcCCCEEEEcCCCCHH---------------HHHHHHHHH-Hh-hcCCCCceEEEeecCHHHHhcHH----HHHH
Q 007936 289 IDFGITEGVDFIAISFVKSAE---------------VINHLKSYI-AA-RSRDSDIAVIAKIESIDSLKNLE----EIIL 347 (584)
Q Consensus 289 I~~al~~gvD~I~lSfV~sae---------------dV~~lr~~l-~~-~~~~~~i~IiAKIEt~~av~Nld----eIl~ 347 (584)
++.+++.|+|+|.+=-|.+-+ +...+...| +. +..+.+..|+.| .|.+-++ ++..
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 356789999999999886533 322222223 11 222434556554 3555556 7777
Q ss_pred hCCEEEEeCCcccc--cCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 348 ASDGAMVARGDLGA--QIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 348 ~sDGImIaRGDLg~--ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
..||+..---=.+- +.+ ++-......-++.++++||||+..
T Consensus 204 ~id~v~~Es~~~~~~~~~~-~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVENLFYLKTIPLE-ENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEESSSEETTEECC-HHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEeeeEEecCCCCCC-HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 89998864211000 011 111222234566778889999974
No 422
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=29.78 E-value=1.3e+02 Score=33.90 Aligned_cols=100 Identities=14% Similarity=0.233 Sum_probs=72.4
Q ss_pred CccCHhhhHHhHhcCCCEEEEcC----------CC--CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-
Q 007936 282 SPKDWLDIDFGITEGVDFIAISF----------VK--SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA- 348 (584)
Q Consensus 282 t~kD~~dI~~al~~gvD~I~lSf----------V~--saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~- 348 (584)
++..+.-|+||.++|.++|.+-- ++ ...|+.+|.+|.+. +.+.|+.--|+..--+++++.++.
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~----kgV~i~lw~~~~~~~~~~~~~~~~~ 383 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAAS----KNVGIILWAGYHAFERDMENVCRHY 383 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHH----TTCEEEEEEEHHHHHTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHh----cCCEEEEEeeCcchHHHHHHHHHHH
Confidence 55668889999999999999721 00 12468899888853 347888888886655668878776
Q ss_pred ----CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 349 ----SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 349 ----sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
.|||-++=-| -.-..+.....+|++.|.+++.-|.+.
T Consensus 384 ~~~Gv~gvK~Df~~----~~~Q~~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 384 AEMGVKGFKVDFMD----RDDQEMTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HHHTCCEEEEECCC----CCSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHcCCCEEEECCCC----CCcHHHHHHHHHHHHHHHHcCCEEEcC
Confidence 7899875221 111466677789999999999887775
No 423
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=29.73 E-value=1.2e+02 Score=31.48 Aligned_cols=66 Identities=12% Similarity=0.165 Sum_probs=42.7
Q ss_pred CceEEEe-cCCC-------CCCHH----HHHHHHHhcCCEEEEeCC----CCC----------------HHHHHHHHHHH
Q 007936 106 RTKLVCT-IGPA-------TCGFE----QLEALAVGGMNVARINMC----HGT----------------REWHRRVIERV 153 (584)
Q Consensus 106 ~tKIi~T-iGPa-------~~~~e----~l~~li~~Gm~v~RiN~s----Hg~----------------~e~~~~~i~~i 153 (584)
+....+| +|.. ..+++ ..+++.++|.+.+.|+.. ||. ....+..++.+
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v 208 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARI 208 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHH
Confidence 4666777 7411 11444 456778899999999985 675 13445555666
Q ss_pred HHHHHHhCCceEEEeecC
Q 007936 154 RRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 154 r~~~~e~~~~i~I~lDl~ 171 (584)
+.+.+..|..+.|++|..
T Consensus 209 ~avR~a~G~d~~l~vDan 226 (410)
T 2gl5_A 209 AAMREAMGDDADIIVEIH 226 (410)
T ss_dssp HHHHHHHCSSSEEEEECT
T ss_pred HHHHHhcCCCCEEEEECC
Confidence 666666777778888874
No 424
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=29.72 E-value=2.9e+02 Score=28.10 Aligned_cols=108 Identities=8% Similarity=0.084 Sum_probs=71.5
Q ss_pred hcCCCEEEEcCCCC--------------HHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcc
Q 007936 294 TEGVDFIAISFVKS--------------AEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDL 359 (584)
Q Consensus 294 ~~gvD~I~lSfV~s--------------aedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDL 359 (584)
+.+..+|+-+..+. .+-++.++++.++ ..+.+++-+-..+.++-++ +.+|.+-||-+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e----~GLpv~Tev~D~~~v~~l~---~~vd~lkIgA~~~ 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKE----YGFPVLTDIHTEEQCAAVA---PVVDVLQIPAFLC 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHH----HCCCEEEECCSHHHHHHHT---TTCSEEEECGGGT
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHh----cCCeEEEEeCCHHHHHHHH---hhCCEEEECcccc
Confidence 35677788765543 3567777777742 2478899887777776554 4589999986554
Q ss_pred cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHH-cccceEeecCCC
Q 007936 360 GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVR-QRADALMLSGES 427 (584)
Q Consensus 360 g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~-~G~D~imLs~ET 427 (584)
...+ +++.+-+.||||++.|.|. -|-.|+...++.+. .|.+=++|..-+
T Consensus 143 ------~n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 143 ------RQTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp ------TCHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEECC
T ss_pred ------CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2333 4555668899999986542 35677777777665 477777775333
No 425
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=29.64 E-value=2.5e+02 Score=24.09 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=14.8
Q ss_pred cccCCCCEEEEeC-CeeEEEE
Q 007936 219 EDVKVGDELLVDG-GMVRFEV 238 (584)
Q Consensus 219 ~~v~vGd~I~idD-G~i~l~V 238 (584)
+.+++|++|.++. ......+
T Consensus 73 ~~LkpG~rVaLn~~s~~Iv~i 93 (109)
T 2wg5_A 73 EELKPGARVALNQQTLAIVNV 93 (109)
T ss_dssp TTCCTTCEEEEETTTCCEEEE
T ss_pred HHCCCCCEEEECCcceEeEEe
Confidence 5699999999997 5444444
No 426
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=29.63 E-value=70 Score=32.00 Aligned_cols=51 Identities=16% Similarity=0.325 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHH
Q 007936 372 QQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRS 442 (584)
Q Consensus 372 Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~ 442 (584)
-+..++.|+++|++|.+.| .+ +..++..++..|+|+|+- .||..+.+++.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WT--Vn-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWT--VN-----------EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBC--CC-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEc--CC-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 4688999999999999997 11 234667788899999985 689888777653
No 427
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=29.63 E-value=2.9e+02 Score=26.15 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=24.5
Q ss_pred hhhHHhHhcCCCEEEEcCC-------CCHHHHHHHHHHHH
Q 007936 287 LDIDFGITEGVDFIAISFV-------KSAEVINHLKSYIA 319 (584)
Q Consensus 287 ~dI~~al~~gvD~I~lSfV-------~saedV~~lr~~l~ 319 (584)
+.++.+.+.|+|+|=+... .+.+++.++++.++
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~ 58 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLK 58 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHH
Confidence 4567888999999988432 13477888888885
No 428
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=29.60 E-value=51 Score=32.47 Aligned_cols=49 Identities=22% Similarity=0.338 Sum_probs=36.4
Q ss_pred HhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhh
Q 007936 339 LKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQL 392 (584)
Q Consensus 339 v~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqm 392 (584)
++.++++++.+|.+.|+.|=+ -++.....+.+++.+++.++|+++-.-+
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDpv~ 95 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDPVG 95 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcCcc
Confidence 566788888999999987644 2344455667788899999999986433
No 429
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=29.58 E-value=61 Score=34.78 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=34.5
Q ss_pred ceEEEecCCCCCCHHHHHH------HHHhcCCEEEEeCCC----C-----CHHHHHHHHHHHHHHHHHh
Q 007936 107 TKLVCTIGPATCGFEQLEA------LAVGGMNVARINMCH----G-----TREWHRRVIERVRRLNEEK 160 (584)
Q Consensus 107 tKIi~TiGPa~~~~e~l~~------li~~Gm~v~RiN~sH----g-----~~e~~~~~i~~ir~~~~e~ 160 (584)
.-+++.||.+..+++..++ .+..|+|.+=||+|- | ..+...++++.+|+..+++
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~ 248 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNL 248 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhh
Confidence 4588899987643222222 223579999999962 2 2456677888888765443
No 430
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=29.54 E-value=1.6e+02 Score=24.22 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=45.4
Q ss_pred HHHHhhcCCcEEEEcc----CCch-HHHHHhccCCCCcEEEEcCchhhhcccccccccEEEEecCCC--CHHHHHHHHHH
Q 007936 482 AKMANNLEVDALFVYT----KTGH-MASLLSRCRPDCPIFAFTSTTSVRRRLNLRWGLIPFRLSFSD--DMESNLNRTFS 554 (584)
Q Consensus 482 v~~A~~l~a~aIvv~T----~sG~-tA~~lSr~RP~~PIiavT~~~~~aR~l~l~~GV~P~~~~~~~--d~~~~i~~~~~ 554 (584)
.+.......++|++=- .+|. .++.+.+..|.+||+.+|.......+ .+..|+.-++..... .....++.++.
T Consensus 48 l~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~-~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (143)
T 2qv0_A 48 LKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVE-AFELEAFDYILKPYQESRIINMLQKLTT 126 (143)
T ss_dssp HHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHH-HHhCCcceEEeCCCCHHHHHHHHHHHHH
Confidence 3444445678777642 2343 34556666678889999987554433 367888888876442 23334555555
Q ss_pred HHHHcC
Q 007936 555 LLKARG 560 (584)
Q Consensus 555 ~~k~~g 560 (584)
...+.+
T Consensus 127 ~~~~~~ 132 (143)
T 2qv0_A 127 AWEQQN 132 (143)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 444443
No 431
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=29.48 E-value=76 Score=31.11 Aligned_cols=52 Identities=13% Similarity=0.224 Sum_probs=32.6
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCC---------C-HHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 119 GFEQLEALAVGGMNVARINMCHG---------T-REWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 119 ~~e~l~~li~~Gm~v~RiN~sHg---------~-~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
+.+.++.|.+.|+|++|+-++.. . .+...+.++.+=+..++.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 57889999999999999976521 1 0222333333333444545 667788853
No 432
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=29.12 E-value=2.3e+02 Score=28.30 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=49.3
Q ss_pred CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+|||++. |= =+..+..++-..+-+..++.++ -..|||+-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 47 v~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 47 TTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGT---------GSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCC---------CCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7999874 21 1122333343333344444332 257888764 2344556555544 6677999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 116 P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 116 PYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 43223334566777777765543
No 433
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=29.02 E-value=3.3e+02 Score=24.77 Aligned_cols=122 Identities=22% Similarity=0.163 Sum_probs=64.1
Q ss_pred HhcCCCEEEEcC----CCCHHHHHHHHHHHHhhcCCCCceEE--EeecC-HHHHhcHHHHHHh-CCEEEEeCCcccccCC
Q 007936 293 ITEGVDFIAISF----VKSAEVINHLKSYIAARSRDSDIAVI--AKIES-IDSLKNLEEIILA-SDGAMVARGDLGAQIP 364 (584)
Q Consensus 293 l~~gvD~I~lSf----V~saedV~~lr~~l~~~~~~~~i~Ii--AKIEt-~~av~NldeIl~~-sDGImIaRGDLg~ei~ 364 (584)
+..|+|+|=+.+ -...+.|+++++.. .+..++ .|+.+ ++- -.+..++. +|++.+-.+. +
T Consensus 22 ~~~~v~~iev~~~~~~~~g~~~i~~l~~~~------~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~~-----~ 88 (207)
T 3ajx_A 22 VAEYVDIIELGTPLIKAEGLSVITAVKKAH------PDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGSA-----D 88 (207)
T ss_dssp HGGGCSEEEECHHHHHHHCTHHHHHHHHHS------TTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTS-----C
T ss_pred hhccCCEEEECcHHHHhhCHHHHHHHHHhC------CCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEeccC-----C
Confidence 334788866643 12234455554432 124555 58876 332 24556666 8999874210 1
Q ss_pred CCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCC-ChhhHHHHHHHHHcccceE-eecCCCC--CCCChHHHHHHH
Q 007936 365 LEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTP-TRAEVADVSEAVRQRADAL-MLSGESA--MGQFPDKALTVL 440 (584)
Q Consensus 365 ~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~P-TrAEv~Dv~nav~~G~D~i-mLs~ETa--~G~yPveaV~~m 440 (584)
...-+.+++.|+++|++++++. . .| |..|. +..+...|+|.+ +..+.++ .|..|.+ +.+
T Consensus 89 ----~~~~~~~~~~~~~~g~~~gv~~------~---s~~~p~~~--~~~~~~~g~d~v~~~~~~~~~~~g~~~~~--~~i 151 (207)
T 3ajx_A 89 ----DSTIAGAVKAAQAHNKGVVVDL------I---GIEDKATR--AQEVRALGAKFVEMHAGLDEQAKPGFDLN--GLL 151 (207)
T ss_dssp ----HHHHHHHHHHHHHHTCEEEEEC------T---TCSSHHHH--HHHHHHTTCSEEEEECCHHHHTSTTCCTH--HHH
T ss_pred ----hHHHHHHHHHHHHcCCceEEEE------e---cCCChHHH--HHHHHHhCCCEEEEEecccccccCCCchH--HHH
Confidence 1234477888899999986642 1 22 22331 122234589998 6544443 4555554 444
Q ss_pred HHHH
Q 007936 441 RSVS 444 (584)
Q Consensus 441 ~~I~ 444 (584)
+.++
T Consensus 152 ~~~~ 155 (207)
T 3ajx_A 152 AAGE 155 (207)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4443
No 434
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=28.82 E-value=81 Score=32.58 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=35.2
Q ss_pred HHHHHHHhcCCEEEEeCCCCC--------------HHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMCHGT--------------REWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~sHg~--------------~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.++|.+.+.|...||. ....+..++.++.+.+..|..+.|++|..
T Consensus 144 ~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n 207 (392)
T 2poz_A 144 AVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLS 207 (392)
T ss_dssp HTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 456778899999999999841 23445555666666666777788888874
No 435
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=28.80 E-value=2.2e+02 Score=29.18 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+|||++. |= =+..+..++-..+-+..++.++ -..|||+-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 66 v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 66 VDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGT---------GGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp CSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 6898874 21 1122333343334444444433 257888764 2455566655555 6667999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..++
T Consensus 135 P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 135 PYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp CSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33223334666777777765543
No 436
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=28.72 E-value=97 Score=31.38 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=47.4
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee-c-CHHHHhcHHHHHHh-CCEEEEeCC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI-E-SIDSLKNLEEIILA-SDGAMVARG 357 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI-E-t~~av~NldeIl~~-sDGImIaRG 357 (584)
+++.+...+.|+|.|++.-+.+.++++++.+.+ ++++++.+ | .....-+.+|+-+. .+.|++++.
T Consensus 170 i~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-------~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~ 237 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEAITELAMYRQFADAV-------QVPILANITEFGATPLFTTDELRSAHVAMALYPLS 237 (295)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-------CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-------CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChH
Confidence 344455578899999999999999999999888 25666544 3 12334577888877 788888644
No 437
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.71 E-value=2.4e+02 Score=23.05 Aligned_cols=70 Identities=13% Similarity=0.003 Sum_probs=43.7
Q ss_pred HHHHHHhhcCCcEEEEccC----CchH-HHHHhc--cCCCCcEEEEcCchhhhcc--cccccccEEEEecCCCCHHHHHH
Q 007936 480 SAAKMANNLEVDALFVYTK----TGHM-ASLLSR--CRPDCPIFAFTSTTSVRRR--LNLRWGLIPFRLSFSDDMESNLN 550 (584)
Q Consensus 480 sav~~A~~l~a~aIvv~T~----sG~t-A~~lSr--~RP~~PIiavT~~~~~aR~--l~l~~GV~P~~~~~~~d~~~~i~ 550 (584)
.|.+...+...++|++=.. +|.. .+.+.+ ..|.+|||.+|........ ..+..|+.-++.+.. +.++...
T Consensus 41 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~-~~~~l~~ 119 (140)
T 3grc_A 41 QALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPI-DENLLIL 119 (140)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSC-CHHHHHH
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCC-CHHHHHH
Confidence 3445555667887777432 3433 344554 5689999999998654332 456779988887654 4444433
No 438
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=28.62 E-value=77 Score=31.10 Aligned_cols=147 Identities=18% Similarity=0.136 Sum_probs=84.4
Q ss_pred CCCCccCHhhh-HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHH-------Hh-C
Q 007936 279 PTISPKDWLDI-DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEII-------LA-S 349 (584)
Q Consensus 279 p~lt~kD~~dI-~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl-------~~-s 349 (584)
|..|..|.+.+ +.+.+.|++.|+++ +..+..++ .++ +..++|.+=|=-+.|-...+.-+ +. +
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~----~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GA 94 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA----PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGA 94 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC----CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc----CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 55666666554 67888999999995 55677777 662 34577777665554443332222 11 4
Q ss_pred CEEEEeCCcccccCCC---CChHHHHHHHHHHHHHc-CC--CeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEe
Q 007936 350 DGAMVARGDLGAQIPL---EQVPSAQQKIVQLCRQL-NK--PVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALM 422 (584)
Q Consensus 350 DGImIaRGDLg~ei~~---e~V~~~Qk~II~~c~~~-gK--PvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~im 422 (584)
|.|=+ -+.++. .+...+.+.|-..+... |+ .||+-|-.|+. ..|..|+..... +...|+|.|=
T Consensus 95 dEIDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVK 164 (231)
T 3ndo_A 95 TEIDM-----VIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVK 164 (231)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEE-----EeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEE
Confidence 54421 122322 24444444443333332 44 36777766632 247788877777 6678999986
Q ss_pred ecCCCC-CCCChHHHHHHHHHHH
Q 007936 423 LSGESA-MGQFPDKALTVLRSVS 444 (584)
Q Consensus 423 Ls~ETa-~G~yPveaV~~m~~I~ 444 (584)
-|.==. .|---++.|+.|++.+
T Consensus 165 TSTGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 165 TSTGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CCCSCCTTCSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHh
Confidence 552101 2233478999998875
No 439
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=28.56 E-value=1.3e+02 Score=31.13 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=34.5
Q ss_pred HHHHHHHhcCCEEEEeCC----CCC-----------HHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMC----HGT-----------REWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~s----Hg~-----------~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.++|.+.+.|+.. ||. ....+..++.++.+.+..|..+.|++|..
T Consensus 153 ~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan 217 (403)
T 2ox4_A 153 EALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENH 217 (403)
T ss_dssp HHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 456778899999999975 674 13344455556655566676778888874
No 440
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=28.46 E-value=2.2e+02 Score=28.20 Aligned_cols=89 Identities=13% Similarity=0.146 Sum_probs=49.8
Q ss_pred CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+||+++. |- =+..+..++-..+-+..++.++. ..|||+-| ...+-.|..+.+. |-..|+|++|+..
T Consensus 35 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 35 TDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 7999884 21 11223333333333333433322 47888764 2445566655554 6677999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 104 PYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33223334666777777776554
No 441
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=28.35 E-value=3.7e+02 Score=25.15 Aligned_cols=105 Identities=6% Similarity=-0.039 Sum_probs=59.1
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh----CCEEEEeCCcccc
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA----SDGAMVARGDLGA 361 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~----sDGImIaRGDLg~ 361 (584)
.++++.+++.|+|||..|. .+. ++.+.++.. + +.++.-+.| .+|+.++ +|.|-+-+
T Consensus 73 ~d~~~~A~~~GAd~v~~~~-~d~-~v~~~~~~~-----g--~~~i~G~~t------~~e~~~A~~~Gad~v~~fp----- 132 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVSPG-LLE-EVAALAQAR-----G--VPYLPGVLT------PTEVERALALGLSALKFFP----- 132 (207)
T ss_dssp HHHHHHHHHHTCSEEEESS-CCH-HHHHHHHHH-----T--CCEEEEECS------HHHHHHHHHTTCCEEEETT-----
T ss_pred HHHHHHHHHcCCCEEEcCC-CCH-HHHHHHHHh-----C--CCEEecCCC------HHHHHHHHHCCCCEEEEec-----
Confidence 4678889999999999884 344 343333333 2 334443444 5555444 79888833
Q ss_pred cCCCCChHHHHHHHHHHHHHc-CCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCC
Q 007936 362 QIPLEQVPSAQQKIVQLCRQL-NKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGES 427 (584)
Q Consensus 362 ei~~e~V~~~Qk~II~~c~~~-gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ET 427 (584)
-+.+-- -+.+-..+... +.|++-.-- . + ..++..++..|+|++...+.-
T Consensus 133 ---a~~~gG-~~~lk~l~~~~~~ipvvaiGG---------I-~---~~n~~~~l~aGa~~vavgSai 182 (207)
T 2yw3_A 133 ---AEPFQG-VRVLRAYAEVFPEVRFLPTGG---------I-K---EEHLPHYAALPNLLAVGGSWL 182 (207)
T ss_dssp ---TTTTTH-HHHHHHHHHHCTTCEEEEBSS---------C-C---GGGHHHHHTCSSBSCEEESGG
T ss_pred ---CccccC-HHHHHHHHhhCCCCcEEEeCC---------C-C---HHHHHHHHhCCCcEEEEehhh
Confidence 221100 01122233344 678764321 1 1 246678889999999886543
No 442
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=28.18 E-value=56 Score=31.21 Aligned_cols=49 Identities=10% Similarity=0.078 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCEEEEeCC-CC----------------CHHHHHHHHHHHHHHHHHhCCceEEEeec
Q 007936 120 FEQLEALAVGGMNVARINMC-HG----------------TREWHRRVIERVRRLNEEKGFAVAIMMDT 170 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN~s-Hg----------------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl 170 (584)
.+.|+.|.+.|+|+.|+=++ ++ ..+.|.+.++.+=+++++.| +-+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G--i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN--ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC--CeEEEEe
Confidence 34688999999999998431 11 11345566666666677777 5566676
No 443
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=28.04 E-value=76 Score=28.97 Aligned_cols=69 Identities=7% Similarity=0.020 Sum_probs=42.3
Q ss_pred HHHHHhhcCCcEEEEccCCchHH-HHHhccCC-CCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHHHHH
Q 007936 481 AAKMANNLEVDALFVYTKTGHMA-SLLSRCRP-DCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMESNLN 550 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T~sG~tA-~~lSr~RP-~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~~i~ 550 (584)
|.+.......++|+....+|... +.+-+. | .+|||.+|....... .-.+..|+.-++.+...+.++...
T Consensus 36 al~~l~~~~~dlvilp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~ 107 (223)
T 2hqr_A 36 GEYLMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVA 107 (223)
T ss_dssp HHHHHTTSCCSEEEECCTTHHHHHHHHHHH-CTTSEEEEEESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHH
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCCCcEEEEECCCCHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 44555566788888444456433 444444 7 899999998744322 223567898888775424444433
No 444
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=27.61 E-value=1.4e+02 Score=27.30 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEe
Q 007936 120 FEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMM 168 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~l 168 (584)
.+.++.+.++|++.+-|.+...+.++..+.++.++++.+..+ +.+++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~--v~v~v 75 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD--ALFFV 75 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT--CEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC--CeEEE
Confidence 478999999999999888777788878888888887766544 44444
No 445
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.57 E-value=2.5e+02 Score=27.85 Aligned_cols=95 Identities=12% Similarity=0.007 Sum_probs=52.9
Q ss_pred HHHHH-h-CCEEEEeCCcc--cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcc
Q 007936 343 EEIIL-A-SDGAMVARGDL--GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQR 417 (584)
Q Consensus 343 deIl~-~-sDGImIaRGDL--g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G 417 (584)
+-.++ . +||+++. |=- +..+..++-..+-+..++.++ -..|||.-| ...+-.|..+.+. |-..|
T Consensus 31 ~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~G 99 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQV---------GSVNLKEAVELGKYATELG 99 (293)
T ss_dssp HHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEC---------CCSCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEec---------CCCCHHHHHHHHHHHHhcC
Confidence 44455 3 7999884 211 122333343333344444332 247888764 2344456555444 66679
Q ss_pred cceEeecCCCCCCCChHHHHHHHHHHHHHHh
Q 007936 418 ADALMLSGESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 418 ~D~imLs~ETa~G~yPveaV~~m~~I~~~aE 448 (584)
+|++|+..=--...-+.+.++..+.|+..+.
T Consensus 100 adavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 100 YDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999997433223335667777778876654
No 446
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=27.52 E-value=72 Score=31.56 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=35.6
Q ss_pred CCCHHHHHHHH-HhcCCEEEEeCCCCC-----HHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 117 TCGFEQLEALA-VGGMNVARINMCHGT-----REWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 117 ~~~~e~l~~li-~~Gm~v~RiN~sHg~-----~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
..+.+.++.|. +.|+|++|+-+.+.. .+...+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLD--IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHT--CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 34578899998 679999999875421 1224455555555556666 567788754
No 447
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=27.49 E-value=1.4e+02 Score=30.98 Aligned_cols=50 Identities=16% Similarity=0.291 Sum_probs=34.4
Q ss_pred HHHHHHHhcCCEEEEeCC----CCC-----------HHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 122 QLEALAVGGMNVARINMC----HGT-----------REWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 122 ~l~~li~~Gm~v~RiN~s----Hg~-----------~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
..+++.++|.+.+.+... ||. ....+..++.++.+.+..|..+.|++|..
T Consensus 159 ~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan 223 (407)
T 2o56_A 159 AALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMH 223 (407)
T ss_dssp HHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 456778899999999986 474 13344455566665566677788888874
No 448
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.47 E-value=1e+02 Score=28.86 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=55.5
Q ss_pred HhhhHHhHhcCCCEEEEcCCC-CHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh-CCEEEEeCCcccccC
Q 007936 286 WLDIDFGITEGVDFIAISFVK-SAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA-SDGAMVARGDLGAQI 363 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~-saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~-sDGImIaRGDLg~ei 363 (584)
.++++.+++.|+++|-+-.=. +.+++.++-+.+. . .....++.- +..+--+++ +|||-++..|+..
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~-~--~~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~-- 83 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLIP-E--KYHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSE-- 83 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSC-G--GGGGGEEES-------SCTTHHHHTTCSEEECCSSSCSC--
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHH-H--HhCCeEEEe-------CCHHHHHHcCCCEEEECcccccc--
Confidence 577889999999999887422 2344333322221 1 123445441 334433444 7999988777622
Q ss_pred CCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecC
Q 007936 364 PLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSG 425 (584)
Q Consensus 364 ~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ 425 (584)
+ . ..++.+++.+. |..| +..|. .|+|.+.++.
T Consensus 84 ~--~-------------~~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 84 P--H-------------DYAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp C--T-------------TCCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred c--c-------------ccCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 1 1 12566665432 3333 45555 8999998864
No 449
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=27.24 E-value=2.9e+02 Score=28.81 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=42.9
Q ss_pred CceEEEecCCC-------CCCHHH----HHHHHHhcCCEEEEeCCCC---------CHHHHHHHHHHHHHHHHHhCCceE
Q 007936 106 RTKLVCTIGPA-------TCGFEQ----LEALAVGGMNVARINMCHG---------TREWHRRVIERVRRLNEEKGFAVA 165 (584)
Q Consensus 106 ~tKIi~TiGPa-------~~~~e~----l~~li~~Gm~v~RiN~sHg---------~~e~~~~~i~~ir~~~~e~~~~i~ 165 (584)
+...-+++++. ..++|. .+++++.|.+.+.++.... +.+...+-++.++.+.+..|..+.
T Consensus 124 ~v~~yas~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~ 203 (412)
T 4e4u_A 124 RLRSYTYLYPKNAKGEYDYDDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKAD 203 (412)
T ss_dssp SEEEEEECCCBCTTSCBCSSCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSE
T ss_pred eeEEEEeccCCcccccccCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCe
Confidence 44555566532 235554 5567788999999987532 233455666677777677777788
Q ss_pred EEeecC
Q 007936 166 IMMDTE 171 (584)
Q Consensus 166 I~lDl~ 171 (584)
|++|..
T Consensus 204 l~vDaN 209 (412)
T 4e4u_A 204 LLFGTH 209 (412)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 888864
No 450
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=27.17 E-value=1.2e+02 Score=32.66 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=0.0
Q ss_pred cCHhhhHHhHhcCCCEEEE------cCCCCHHHHHHHHHHHHhhcCCCCceEEE--eecCHHHHhcHHHHHHhCCEEEEe
Q 007936 284 KDWLDIDFGITEGVDFIAI------SFVKSAEVINHLKSYIAARSRDSDIAVIA--KIESIDSLKNLEEIILASDGAMVA 355 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~l------SfV~saedV~~lr~~l~~~~~~~~i~IiA--KIEt~~av~NldeIl~~sDGImIa 355 (584)
.+.+++++|++.|+|+|.+ .|--+-+...++...+ ..++.+|+ -|-|++-+..+-+. +||++||
T Consensus 165 h~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~i-----p~~~~vIaEsGI~t~edv~~~~~~---a~avLVG 236 (452)
T 1pii_A 165 SNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKL-----GHNVTVISESGINTYAQVRELSHF---ANGFLIG 236 (452)
T ss_dssp CSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHH-----CTTSEEEEESCCCCHHHHHHHTTT---CSEEEEC
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhC-----CCCCeEEEECCCCCHHHHHHHHHh---CCEEEEc
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE
Q 007936 356 RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL 421 (584)
Q Consensus 356 RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i 421 (584)
..=+-.++....-+.++ ...-|-|++. ...|+..++..|+|++
T Consensus 237 ----ealmr~~d~~~~~~~l~---~~~~KICGit----------------~~eda~~a~~~Gad~i 279 (452)
T 1pii_A 237 ----SALMAHDDLHAAVRRVL---LGENKVCGLT----------------RGQDAKAAYDAGAIYG 279 (452)
T ss_dssp ----HHHHTCSCHHHHHHHHH---HCSCEECCCC----------------SHHHHHHHHHHTCSEE
T ss_pred ----HHHcCCcCHHHHHHHHH---HHhccccCCC----------------cHHHHHHHHhcCCCEE
No 451
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=27.14 E-value=4.3e+02 Score=25.80 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=81.6
Q ss_pred CCCccCH-hhhHHhHhcC-CCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee----cCHHHHhcHHHHHHh-----
Q 007936 280 TISPKDW-LDIDFGITEG-VDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI----ESIDSLKNLEEIILA----- 348 (584)
Q Consensus 280 ~lt~kD~-~dI~~al~~g-vD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI----Et~~av~NldeIl~~----- 348 (584)
..++.++ +-++.+++.| +|||=+-.-... .+.++.+.... .+++||+-- +|+. .+++.+++..
T Consensus 96 ~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~----~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~g 169 (257)
T 2yr1_A 96 PLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEE----CSVWLVVSRHYFDGTPR-KETLLADMRQAERYG 169 (257)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHH----TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHh----CCCEEEEEecCCCCCcC-HHHHHHHHHHHHhcC
Confidence 3454444 4457789998 999998874433 56666554421 246666654 4553 3444444432
Q ss_pred CCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceE--eecCC
Q 007936 349 SDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADAL--MLSGE 426 (584)
Q Consensus 349 sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~i--mLs~E 426 (584)
+|.+=|+. +.-..+++..+.+-.-+......+|+|.- ||=.....+|. .+.+. |.-.. .+...
T Consensus 170 aDivKia~----~a~s~~D~l~ll~~~~~~~~~~~~P~I~~-----~MG~~G~~SRi-----~~~~~-GS~~Tf~~l~~~ 234 (257)
T 2yr1_A 170 ADIAKVAV----MPKSPEDVLVLLQATEEARRELAIPLITM-----AMGGLGAITRL-----AGWLF-GSAVTFAVGNQS 234 (257)
T ss_dssp CSEEEEEE----CCSSHHHHHHHHHHHHHHHHHCSSCEEEE-----ECTTTTHHHHH-----HGGGG-TBCEEECBSSSC
T ss_pred CCEEEEEe----ccCCHHHHHHHHHHHHHHhccCCCCEEEE-----ECCCCcchHHH-----HHHHh-CCceEecCCCCC
Confidence 57666551 11123466666554433323347898864 56555555554 66654 43332 35678
Q ss_pred CCCCCChHHHHHHHHHHH
Q 007936 427 SAMGQFPDKALTVLRSVS 444 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I~ 444 (584)
+|=|+.+++-++-+-++.
T Consensus 235 sAPGQl~~~el~~~l~~l 252 (257)
T 2yr1_A 235 SAPGQIPIDDVRTVLSIL 252 (257)
T ss_dssp SSTTCCBHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 899999887776554444
No 452
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.12 E-value=3.3e+02 Score=26.99 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=51.0
Q ss_pred CCEEEEeCCccc--ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGDLG--AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDLg--~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+||+++. |--| ..+..++-..+.+..++.++ -..|||+-+ ...+-.|..+.+. |-..|+|++|+..
T Consensus 37 v~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 37 AQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999885 2111 12222333333333333332 246888764 2445556555544 6667999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 106 P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 106 PYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 43333345677888888887775
No 453
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=27.12 E-value=1.1e+02 Score=30.87 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=36.5
Q ss_pred HHHcCCCeEE-ehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHH
Q 007936 379 CRQLNKPVIV-ASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSL 445 (584)
Q Consensus 379 c~~~gKPviv-ATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~ 445 (584)
+.....|+++ | ....-|. .|+..+...|+|+++...--.....|.++++.|...+.
T Consensus 203 ~~~~~iPVivvA--------~GGI~t~---~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~ 259 (297)
T 4adt_A 203 RKLKRLPVVNFA--------AGGIATP---ADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVS 259 (297)
T ss_dssp HHHTSCSSEEEE--------ESCCCSH---HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEe--------cCCCCCH---HHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHH
Confidence 4445788873 3 1233343 46677788899999987444445688888887766554
No 454
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=27.04 E-value=1.6e+02 Score=27.93 Aligned_cols=130 Identities=9% Similarity=0.055 Sum_probs=0.0
Q ss_pred cCHhhhHHhHhcCCCEEEEcCC--CCHHHHHHHHHHHHhhcCCCCceEEEeecCH---------------HHHhcHHHHH
Q 007936 284 KDWLDIDFGITEGVDFIAISFV--KSAEVINHLKSYIAARSRDSDIAVIAKIESI---------------DSLKNLEEII 346 (584)
Q Consensus 284 kD~~dI~~al~~gvD~I~lSfV--~saedV~~lr~~l~~~~~~~~i~IiAKIEt~---------------~av~NldeIl 346 (584)
.+.++++.+++.|+|.|.+.-- ++++.+.++ +.+ + -.++.-+..+ ...+-+..+.
T Consensus 83 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~-----g--~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~ 154 (241)
T 1qo2_A 83 RSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REI-----D--VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLK 154 (241)
T ss_dssp CSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTT-----T--CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHc-----C--CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHH
Q ss_pred Hh-CCEEEE-eCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHc-----c-c
Q 007936 347 LA-SDGAMV-ARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQ-----R-A 418 (584)
Q Consensus 347 ~~-sDGImI-aRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~-----G-~ 418 (584)
+. ++.|++ +++-=+...+.. .+.+-+.+...+.|||...-+- ...|+...... | +
T Consensus 155 ~~G~~~i~~t~~~~~g~~~g~~-----~~~i~~l~~~~~iPvia~GGI~------------~~~d~~~~~~~~~~~~G~a 217 (241)
T 1qo2_A 155 EYGLEEIVHTEIEKDGTLQEHD-----FSLTKKIAIEAEVKVLAAGGIS------------SENSLKTAQKVHTETNGLL 217 (241)
T ss_dssp TTTCCEEEEEETTHHHHTCCCC-----HHHHHHHHHHHTCEEEEESSCC------------SHHHHHHHHHHHHHTTTSE
T ss_pred hCCCCEEEEEeecccccCCcCC-----HHHHHHHHHhcCCcEEEECCCC------------CHHHHHHHHhcccccCCeE
Q ss_pred ceEeecCCCCCCCChHHHHH
Q 007936 419 DALMLSGESAMGQFPDKALT 438 (584)
Q Consensus 419 D~imLs~ETa~G~yPveaV~ 438 (584)
|+++...---.|.++.+.+.
T Consensus 218 dgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 218 KGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp EEEEECHHHHTTSSCHHHHH
T ss_pred eEEEeeHHHHcCCCCHHHHH
No 455
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=27.01 E-value=51 Score=30.25 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=44.8
Q ss_pred HHHHHHHHhCCceEEEeecC----CCeEEEeecCCCCceEee---CCCEEEEeec-ccCCCCCCCEEEecccc--hhccc
Q 007936 152 RVRRLNEEKGFAVAIMMDTE----GSEIHMGDLSGPPSARAE---DGEIWTFTVR-AFDSPRPERTITVNYDG--FAEDV 221 (584)
Q Consensus 152 ~ir~~~~e~~~~i~I~lDl~----GpkIR~G~~~~~~~i~l~---~G~~v~~t~~-~~~~~~~~~~i~v~~~~--~~~~v 221 (584)
.|+.+++++. -+-.+|.. ..++..| ..+.++ .|++.+++.- ..........|++..|= -+-.-
T Consensus 61 ri~~Le~~L~--~a~vid~~~~~~~~~V~~G-----s~V~l~~~~~~~~~~y~iVg~~ead~~~~~IS~~SPlG~ALlGk 133 (158)
T 1grj_A 61 RIKDIEAKLS--NAQVIDVTKMPNNGRVIFG-----ATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGK 133 (158)
T ss_dssp HHHHHHHHHH--HEEEECGGGSCCCSBCCTT-----CEEEEEETTTTEEEEEEEECTTTCBGGGTEEESSSHHHHHHTTC
T ss_pred HHHHHHHHHh--hCeecCccccCCCCEEEeC-----cEEEEEECCCCCEEEEEEECHHHhCCcCCEEcCCCHHHHHHcCC
Confidence 5666666654 34445543 2334443 345554 4655555432 11222234567776551 23347
Q ss_pred CCCCEEEEe--CCeeEEEEEEEe
Q 007936 222 KVGDELLVD--GGMVRFEVIEKI 242 (584)
Q Consensus 222 ~vGd~I~id--DG~i~l~V~~~~ 242 (584)
++||.|.+. +|...++|.++.
T Consensus 134 ~~GD~v~v~~p~G~~~~~I~~I~ 156 (158)
T 1grj_A 134 EEDDVVVIKTPGGEVEFEVIKVE 156 (158)
T ss_dssp BTTCEECC------CCEEEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEEEEEE
Confidence 899999887 788888888865
No 456
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=26.92 E-value=1.2e+02 Score=31.28 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCCEEEEeCCC--CCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 120 FEQLEALAVGGMNVARINMCH--GTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN~sH--g~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
.+..+++.+.|.+.+.|++.| ++.++-.+.++.+| +..|..+.|++|..
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR---~a~g~~~~l~vDan 201 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVR---EAAGPEMEVQIDLA 201 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHH---HHHCSSSEEEEECT
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHH---HHhCCCCeEEEECC
Confidence 456778888999999999987 35666555665555 44566677887764
No 457
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=26.73 E-value=2.7e+02 Score=26.26 Aligned_cols=100 Identities=15% Similarity=0.228 Sum_probs=56.7
Q ss_pred CHhh-hHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEee---c----CHHHHhcHHHHHHhCCEEEEeC
Q 007936 285 DWLD-IDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKI---E----SIDSLKNLEEIILASDGAMVAR 356 (584)
Q Consensus 285 D~~d-I~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKI---E----t~~av~NldeIl~~sDGImIaR 356 (584)
|.++ ++.+.+.|++.++++-+ +.++...+.++.+. .. ++....-+ + +.+.++.|++.+...-.+-|
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~--~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~i-- 93 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQ--YS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAI-- 93 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHH--ST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTSTTEEEE--
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHh--CC-CEEEEEEECCcccccCCHHHHHHHHHHhcCCCeEEE--
Confidence 4443 35677899999776543 57788777777642 12 22212211 1 12345555555542223333
Q ss_pred CcccccCCCC-ChHHHHH----HHHHHHHHcCCCeEEeh
Q 007936 357 GDLGAQIPLE-QVPSAQQ----KIVQLCRQLNKPVIVAS 390 (584)
Q Consensus 357 GDLg~ei~~e-~V~~~Qk----~II~~c~~~gKPvivAT 390 (584)
|..|++.... .-...|+ ..++.|.+.|+||++.|
T Consensus 94 GE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 94 GECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 5666665332 1124443 56889999999999986
No 458
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.71 E-value=2.5e+02 Score=28.53 Aligned_cols=89 Identities=17% Similarity=0.142 Sum_probs=49.5
Q ss_pred CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+|||++. |= =+..+..++-..+-+..++.++ -..|||+-| ...+-+|..+.+. |-..|+|++|+..
T Consensus 69 v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 69 VDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGI---------GALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 7999874 21 1122333333333333443332 247888764 2344556655554 6667999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 138 P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 138 VSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33223334566777777776554
No 459
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=26.66 E-value=2.7e+02 Score=27.76 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCEEEEeCCcc--cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecC
Q 007936 349 SDGAMVARGDL--GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDL--g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~ 425 (584)
+||+++. |=- +..+..++-..+-+..++.++ -..|||+-+ ...+-.|..+.+. |-..|+|++|+..
T Consensus 51 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 51 LDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV---------GTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp CCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 7999875 211 122223333333333343332 247888764 2445566655554 6677999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 120 P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 120 PYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222234566777777776554
No 460
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=26.65 E-value=81 Score=32.42 Aligned_cols=62 Identities=10% Similarity=-0.040 Sum_probs=39.1
Q ss_pred CceEEEecCCCCC--CHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPATC--GFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa~~--~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+...-.|+|-.+- -.+..+++.++|.+.+.|++.| +.++-.++++.+| +..|..+.|++|..
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr---~a~g~d~~l~vDan 197 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACL---PLLEPGEKAMADAN 197 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHG---GGSCTTCEEEEECT
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHH---HhcCCCCEEEEECC
Confidence 4555677763111 1234577889999999999998 4544445555554 45565566777753
No 461
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=26.61 E-value=56 Score=33.33 Aligned_cols=47 Identities=17% Similarity=0.299 Sum_probs=36.0
Q ss_pred EEecCCCCCCHHHHHHHHHhc--CCEEEEeCCCCCHHHHHHHHHHHHHH
Q 007936 110 VCTIGPATCGFEQLEALAVGG--MNVARINMCHGTREWHRRVIERVRRL 156 (584)
Q Consensus 110 i~TiGPa~~~~e~l~~li~~G--m~v~RiN~sHg~~e~~~~~i~~ir~~ 156 (584)
.+-+|......+.++.++++| ++..-+|++||+.....+.++.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 444665444567788899999 99999999999877777788777764
No 462
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=26.58 E-value=88 Score=30.64 Aligned_cols=48 Identities=15% Similarity=0.308 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCEEEEeCCCCC---HHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 121 EQLEALAVGGMNVARINMCHGT---REWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 121 e~l~~li~~Gm~v~RiN~sHg~---~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+.++.|.+.|+|++|+-++.+. ... .+.++.+=+...+.| +.+++|+-
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~-~~~ld~~v~~a~~~G--i~Vild~h 86 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNG-PSDVANVISLCKQNR--LICMLEVH 86 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCC-HHHHHHHHHHHHHTT--CEEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCC-HHHHHHHHHHHHHCC--CEEEEEec
Confidence 6788899999999999886431 011 122333333334444 66788875
No 463
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=26.44 E-value=93 Score=31.49 Aligned_cols=61 Identities=13% Similarity=0.155 Sum_probs=42.3
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH--HhcHHHHHHh-CCEEEEeC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS--LKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a--v~NldeIl~~-sDGImIaR 356 (584)
.+.+..+++.|+|+|.+.. -+.++++++++.+ +.+++|.| --| .+|+.++++. +|+|-++.
T Consensus 218 lee~~eA~~aGaD~I~ld~-~~~e~l~~~v~~~-----~~~~~I~A----SGGIt~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 218 LDELDDALKAGADIIMLDN-FNTDQMREAVKRV-----NGQARLEV----SGNVTAETLREFAETGVDFISVGA 281 (296)
T ss_dssp HHHHHHHHHTTCSEEEESS-CCHHHHHHHHHTT-----CTTCCEEE----CCCSCHHHHHHHHHTTCSEEECSH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHh-----CCCCeEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 4567888999999999987 6778888887765 22343333 233 4566666666 89988865
No 464
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.14 E-value=2.8e+02 Score=27.46 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=51.5
Q ss_pred HHHHHh-CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHccc
Q 007936 343 EEIILA-SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRA 418 (584)
Q Consensus 343 deIl~~-sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~ 418 (584)
+-.++. +||+++. |- =+..+..++-..+-+..++.++. ..|||+-| ...+-.|..+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCC
Confidence 333444 7999884 21 11222333333333333333322 47888764 2445556655554 666799
Q ss_pred ceEeecCCCCCCCChHHHHHHHHHHHHHHh
Q 007936 419 DALMLSGESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 419 D~imLs~ETa~G~yPveaV~~m~~I~~~aE 448 (584)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997433222334566777777776554
No 465
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=26.04 E-value=3.2e+02 Score=27.50 Aligned_cols=163 Identities=15% Similarity=0.090 Sum_probs=85.4
Q ss_pred ceEEEeecCHHHH-------hcHHHHHHh-----CCEEEEe---CCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehh
Q 007936 327 IAVIAKIESIDSL-------KNLEEIILA-----SDGAMVA---RGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQ 391 (584)
Q Consensus 327 i~IiAKIEt~~av-------~NldeIl~~-----sDGImIa---RGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATq 391 (584)
..|+.|.|..+.+ ..+.-++.. .++|+-+ -|..|. -+...|++.|.|+.+..
T Consensus 47 ~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~------------alA~aa~~~G~~~~iv~- 113 (342)
T 4d9b_A 47 REIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVR------------QTAAVAAKLGLHCVALL- 113 (342)
T ss_dssp SCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHH------------HHHHHHHHHTCEEEEEE-
T ss_pred CEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHH------------HHHHHHHHhCCcEEEEE-
Confidence 4799999987651 112222211 4556554 244433 35667999999988762
Q ss_pred hhHhhhcCCCCCh--h--hHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCC
Q 007936 392 LLESMIEYPTPTR--A--EVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWREEKRHEAMELPDVGS 467 (584)
Q Consensus 392 mLeSMi~~p~PTr--A--Ev~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~ 467 (584)
-.+ .|.. . ....+...-..|++.+...++ .+..++++ ..+++..+... . ..+...+.
T Consensus 114 -----p~~-~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~----~~~~~~~~---~~a~~l~~~~~--~--~~~~p~~~-- 174 (342)
T 4d9b_A 114 -----ENP-IGTTAENYLTNGNRLLLDLFNTQIEMCDAL----TDPDAQLQ---TLATRIEAQGF--R--PYVIPVGG-- 174 (342)
T ss_dssp -----ECT-TCCCCHHHHHSHHHHHHHHTTCEEEECSCC----SSHHHHHH---HHHHHHHHTTC--C--EEECCGGG--
T ss_pred -----eCC-CCCccccccccchHHHHHHCCCEEEEECch----hhHHHHHH---HHHHHHHhcCC--c--eEEeCCCC--
Confidence 111 1110 0 012344455689997776543 23333332 22222211000 0 00100110
Q ss_pred CCCcChHHHHHHHHHHHHhhc----CCcEEEEccCCchHHHHHhc----cCCCCcEEEEcCch
Q 007936 468 SFAESISEEICNSAAKMANNL----EVDALFVYTKTGHMASLLSR----CRPDCPIFAFTSTT 522 (584)
Q Consensus 468 ~~~~~~~~~ia~sav~~A~~l----~a~aIvv~T~sG~tA~~lSr----~RP~~PIiavT~~~ 522 (584)
..+. ........+.|+.+++ ..++||+.+-+|.|+.-+++ ..|.+.||+|-+..
T Consensus 175 ~n~~-~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~ 236 (342)
T 4d9b_A 175 SSAL-GAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSR 236 (342)
T ss_dssp CSHH-HHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CChH-HHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecC
Confidence 0010 1123334566677665 47999999999998877664 47999999998853
No 466
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=25.90 E-value=3.2e+02 Score=27.93 Aligned_cols=63 Identities=19% Similarity=0.115 Sum_probs=41.3
Q ss_pred CceEEEecC-CCCCCHHH----HHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIG-PATCGFEQ----LEALAVG-GMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiG-Pa~~~~e~----l~~li~~-Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+...-+|+| ....+++. .+++++. |.+.+.+.+...+.++-.+.++.+| +..|..+.+++|..
T Consensus 137 ~v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR---~~~g~~~~l~vDan 205 (372)
T 3tj4_A 137 GVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVR---ERVDSAVRIAIDGN 205 (372)
T ss_dssp CEEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHH---HHSCTTCEEEEECT
T ss_pred CeEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHH---HHcCCCCcEEeeCC
Confidence 366777743 32334543 3457778 9999999998767666655555555 45566677777764
No 467
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=25.85 E-value=1.1e+02 Score=31.80 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=43.1
Q ss_pred CceEEEecCCC-CCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 106 RTKLVCTIGPA-TCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 106 ~tKIi~TiGPa-~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+....+|+|.. ..+++ ..+++.++|.+.+.+...|++.++..+.++.+|++ .|..+.|++|..
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---vG~d~~l~vDan 228 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREA---LGDEFPLMVDAN 228 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHH---HCSSSCEEEECT
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHH---cCCCCeEEEECC
Confidence 44556666543 22454 45677889999999999988877777777777764 455566677753
No 468
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=25.78 E-value=1.1e+02 Score=32.70 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=38.9
Q ss_pred CHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 119 GFEQLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 119 ~~e~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+.+++++|.++|.++.|+-.- + ++..+-+..|++--...+.++++..|+-
T Consensus 40 Tv~QI~~L~~aG~eiVRvaVp--~-~~~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTVN--D-EEAAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECC--S-HHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecC--C-HHHHHhHHHHHHHHHhcCCCCceEeeec
Confidence 367899999999999998643 3 4455667777776566788999999985
No 469
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.77 E-value=4.1e+02 Score=24.78 Aligned_cols=90 Identities=7% Similarity=-0.006 Sum_probs=53.0
Q ss_pred HhhhHHhHhcCCCEEEEcCC-----CCHHHHHHHHHHHHhhcCCCCceEEEe--ecCHHHHhcHHHHHHh--CCEEEEeC
Q 007936 286 WLDIDFGITEGVDFIAISFV-----KSAEVINHLKSYIAARSRDSDIAVIAK--IESIDSLKNLEEIILA--SDGAMVAR 356 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV-----~saedV~~lr~~l~~~~~~~~i~IiAK--IEt~~av~NldeIl~~--sDGImIaR 356 (584)
.+.++.+.+.|+|+|=+... .+++++.++++.++. .|-.+..+.- .++.+.++..=++++. ++.|.+.+
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~--~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p 110 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAA--HKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVP 110 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHH--TTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHH--cCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecC
Confidence 34567888999999987753 378899999999954 2322221111 1333333333333333 56666654
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHcCCCeEE
Q 007936 357 GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIV 388 (584)
Q Consensus 357 GDLg~ei~~e~V~~~Qk~II~~c~~~gKPviv 388 (584)
| . ..-+++...|.++|..+.+
T Consensus 111 ~-------~----~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 111 N-------Y----ELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp C-------G----GGHHHHHHHHHHHTCEEEE
T ss_pred C-------H----HHHHHHHHHHHHcCCEEEE
Confidence 4 1 2335677778888876664
No 470
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=25.75 E-value=83 Score=33.40 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=31.6
Q ss_pred CCHHHH-HHHHHhcCCEEEEeCCCCC-------H-HHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 118 CGFEQL-EALAVGGMNVARINMCHGT-------R-EWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 118 ~~~e~l-~~li~~Gm~v~RiN~sHg~-------~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
...+.| +.|.+.|+|++||-++... + +...+.++.+=+..++.| +.+++|+-
T Consensus 66 ~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~G--i~vildlH 126 (481)
T 2osx_A 66 FTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERG--YKVMLDMH 126 (481)
T ss_dssp CCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred ccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence 457888 8999999999999875211 1 122223333333334545 66788854
No 471
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=25.51 E-value=69 Score=32.61 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=33.8
Q ss_pred CHHHHHHHH-HhcCCEEEEeCCCC------CHHHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 119 GFEQLEALA-VGGMNVARINMCHG------TREWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 119 ~~e~l~~li-~~Gm~v~RiN~sHg------~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
+.+.++.|. +.|+|++||-+..+ ++++. +.++.+=+..++.| +.+++|+-+
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G--i~VIld~H~ 112 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD--MYVIVDWHV 112 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC--CEEEEEecc
Confidence 478899997 89999999987632 22332 34444444445555 667888865
No 472
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=25.40 E-value=1.2e+02 Score=24.51 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=25.4
Q ss_pred cCCCCEEEEeCCeeEEEEEEEeCCeEEEEEEcC
Q 007936 221 VKVGDELLVDGGMVRFEVIEKIGPDVKCRCTDP 253 (584)
Q Consensus 221 v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~~~ 253 (584)
-++|..|.|+| .|.++|.++.++.+.-=+..+
T Consensus 6 Rk~GEsI~IGd-~I~ItVl~v~g~~VrLGI~AP 37 (70)
T 2jpp_A 6 RKVGESINIGD-DITITILGVSGQQVRIGINAP 37 (70)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEEEEEECC
T ss_pred ccCCCeEEECC-CEEEEEEEEeCCEEEEEEECC
Confidence 47899999987 499999999998887655544
No 473
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=25.32 E-value=79 Score=31.88 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=34.2
Q ss_pred CCHHHHHHHH-HhcCCEEEEeCCCCCH-----HHHHHHHHHHHHHHHHhCCceEEEeecCC
Q 007936 118 CGFEQLEALA-VGGMNVARINMCHGTR-----EWHRRVIERVRRLNEEKGFAVAIMMDTEG 172 (584)
Q Consensus 118 ~~~e~l~~li-~~Gm~v~RiN~sHg~~-----e~~~~~i~~ir~~~~e~~~~i~I~lDl~G 172 (584)
.+.+.++.|. +.|+|++|+-+.+... +...+.++.+=++.++.| +.+++|+-+
T Consensus 69 ~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~VilD~H~ 127 (327)
T 3pzt_A 69 VNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELG--IYVIIDWHI 127 (327)
T ss_dssp CSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHT--CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 4577899986 6899999997764321 122344555555566666 566788753
No 474
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=25.26 E-value=1.4e+02 Score=29.13 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=40.9
Q ss_pred EeeCCCEEEEeecc---cCCCCCCCEEEecccchhcc---cCCCCEEEEeCCeeEEEEEEEeCCeEEE
Q 007936 187 RAEDGEIWTFTVRA---FDSPRPERTITVNYDGFAED---VKVGDELLVDGGMVRFEVIEKIGPDVKC 248 (584)
Q Consensus 187 ~l~~G~~v~~t~~~---~~~~~~~~~i~v~~~~~~~~---v~vGd~I~idDG~i~l~V~~~~~~~i~c 248 (584)
-++.|++++|+... |-..+++....++...|... +++|+.+.+++ . ...|+++.++.+..
T Consensus 63 Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~-~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 63 EMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (231)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecC-C-CEEEEEEcCCEEEE
Confidence 46789999998763 32234445566777777653 67799999864 3 46788887776543
No 475
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=25.22 E-value=1.5e+02 Score=24.98 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=45.3
Q ss_pred HHHHHhhcCCcEEEEccC----Cch-HHHHHhccCCCCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHHHHHHHHH
Q 007936 481 AAKMANNLEVDALFVYTK----TGH-MASLLSRCRPDCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMESNLNRTFS 554 (584)
Q Consensus 481 av~~A~~l~a~aIvv~T~----sG~-tA~~lSr~RP~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~~i~~~~~ 554 (584)
|.+...+...++|++-.. +|. .++.+-+..|.+|||++|....... .-.+..|+.-++.+.. +.++. ..++.
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~-~~~~l-~~~i~ 135 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKER-SIADL-MQTLH 135 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTS-CHHHH-HHHHH
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCC-CHHHH-HHHHH
Confidence 445556667887777433 343 3455666779999999998755322 2236678888887644 44443 33443
Q ss_pred HH
Q 007936 555 LL 556 (584)
Q Consensus 555 ~~ 556 (584)
.+
T Consensus 136 ~~ 137 (150)
T 4e7p_A 136 TV 137 (150)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 476
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=25.10 E-value=1.5e+02 Score=29.88 Aligned_cols=58 Identities=14% Similarity=0.190 Sum_probs=36.9
Q ss_pred ceEEEecCCCCCCHH----HHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 107 TKLVCTIGPATCGFE----QLEALAVGGMNVARINMCHGTREWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 107 tKIi~TiGPa~~~~e----~l~~li~~Gm~v~RiN~sHg~~e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
...-+|+|-. +++ ..+++.+.|.+.+.|...| +.++-.++++.+|+ . |..+.|++|-.
T Consensus 129 v~~~~~~~~~--~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~---~-g~~~~l~vDan 190 (345)
T 2zad_A 129 IETDKTVGID--TVENRVKEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAK---V-TRGAKYIVDAN 190 (345)
T ss_dssp EEBCEEECSC--CHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHH---H-STTCEEEEECT
T ss_pred eeeeEEecCC--CHHHHHHHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHh---h-CCCCeEEEECC
Confidence 3444566532 344 3567788999999999988 44544555555554 3 55567777763
No 477
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=25.10 E-value=2.2e+02 Score=28.82 Aligned_cols=86 Identities=16% Similarity=0.350 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--------CCEEEEeCCcccccCCCCChHHHHHHHH
Q 007936 305 VKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--------SDGAMVARGDLGAQIPLEQVPSAQQKIV 376 (584)
Q Consensus 305 V~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--------sDGImIaRGDLg~ei~~e~V~~~Qk~II 376 (584)
+...+.+..++...+... +.+..|+|..|.. +.+.+||.++- +|+||+ +=+.--+.|-
T Consensus 135 ~~~~e~~~ri~Aa~~A~~-~~~~~I~ARTDa~-~~~gldeai~Ra~ay~~AGAD~if~------------~~~~~~ee~~ 200 (298)
T 3eoo_A 135 VPAGEMVDRIKAAVDART-DETFVIMARTDAA-AAEGIDAAIERAIAYVEAGADMIFP------------EAMKTLDDYR 200 (298)
T ss_dssp CCHHHHHHHHHHHHHHCS-STTSEEEEEECTH-HHHHHHHHHHHHHHHHHTTCSEEEE------------CCCCSHHHHH
T ss_pred cCHHHHHHHHHHHHHhcc-CCCeEEEEeehhh-hhcCHHHHHHHHHhhHhcCCCEEEe------------CCCCCHHHHH
Q ss_pred HHHHHcCCCeEEehhhhHhhhcC---CCCChhhHHHH
Q 007936 377 QLCRQLNKPVIVASQLLESMIEY---PTPTRAEVADV 410 (584)
Q Consensus 377 ~~c~~~gKPvivATqmLeSMi~~---p~PTrAEv~Dv 410 (584)
+.|++..+|+.+- |... |.+|.+|..+.
T Consensus 201 ~~~~~~~~Pl~~n------~~~~g~tp~~~~~eL~~l 231 (298)
T 3eoo_A 201 RFKEAVKVPILAN------LTEFGSTPLFTLDELKGA 231 (298)
T ss_dssp HHHHHHCSCBEEE------CCTTSSSCCCCHHHHHHT
T ss_pred HHHHHcCCCeEEE------eccCCCCCCCCHHHHHHc
No 478
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=25.01 E-value=1.6e+02 Score=29.94 Aligned_cols=66 Identities=15% Similarity=0.208 Sum_probs=45.2
Q ss_pred CCEEEEeCC-----cccccCCC--CChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcC-CCCChhhHHHHHHHHHc--cc
Q 007936 349 SDGAMVARG-----DLGAQIPL--EQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEY-PTPTRAEVADVSEAVRQ--RA 418 (584)
Q Consensus 349 sDGImIaRG-----DLg~ei~~--e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~-p~PTrAEv~Dv~nav~~--G~ 418 (584)
.|.|.+-+| ..|...++ ++-+...+.+.+++++.++-+++-+ .. |.-| -.|++.++.. |+
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc-------~gGpIst---peDv~~~l~~t~G~ 253 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS-------HGGPIAN---PEDARFILDSCQGC 253 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE-------ESTTCCS---HHHHHHHHHHCTTC
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe-------cCCCCCC---HHHHHHHHhcCCCc
Confidence 688888777 55655544 4557888999999999988887742 23 4433 4577888887 99
Q ss_pred ceEeec
Q 007936 419 DALMLS 424 (584)
Q Consensus 419 D~imLs 424 (584)
|++...
T Consensus 254 ~G~~gA 259 (286)
T 2p10_A 254 HGFYGA 259 (286)
T ss_dssp CEEEES
T ss_pred cEEEee
Confidence 999985
No 479
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=24.97 E-value=3.7e+02 Score=26.79 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=49.3
Q ss_pred CCEEEEeC-CcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHcccceEeecCC
Q 007936 349 SDGAMVAR-GDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRADALMLSGE 426 (584)
Q Consensus 349 sDGImIaR-GDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~D~imLs~E 426 (584)
+|||++.= --=+..+..++-..+-+..++.++ -..|||+-+ ...+-+|..+.+. |-..|+|++|+..=
T Consensus 50 v~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 50 CDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGA---------GTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp CSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 79998841 111122333333333333333332 246888764 2445566655544 66679999999743
Q ss_pred CCCCCChHHHHHHHHHHHHHHh
Q 007936 427 SAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 427 Ta~G~yPveaV~~m~~I~~~aE 448 (584)
--...-+.+.++..+.|+..+.
T Consensus 120 ~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 120 YYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 3222235667777777765553
No 480
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=24.95 E-value=59 Score=34.20 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=33.5
Q ss_pred CHHHHHHHHHhcCCEEEEeCCC-------CCHH--HHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 119 GFEQLEALAVGGMNVARINMCH-------GTRE--WHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 119 ~~e~l~~li~~Gm~v~RiN~sH-------g~~e--~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
+.+.++.|.++|+|++||-+.+ +.+- ...+.++.+=+...+.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 5789999999999999998852 2110 12334444444445544 78888873
No 481
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=24.93 E-value=1.5e+02 Score=28.55 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=41.9
Q ss_pred HHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 312 NHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 312 ~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+.+++.+. ..+..+.+.+.-+... -+|++++++-.|.|+.+-++ +.....+.+.|++.|+|++.+
T Consensus 88 ~~~~~~l~--~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 88 ESARDALT--RINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHH--HHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHH--HHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 34444442 2244555544333322 25788888889999987433 246778889999999999875
No 482
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=24.93 E-value=5e+02 Score=25.44 Aligned_cols=129 Identities=13% Similarity=0.009 Sum_probs=0.0
Q ss_pred CCccCHhhhHHhHhcCCCEEEEc--------------CCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHH---HhcHH
Q 007936 281 ISPKDWLDIDFGITEGVDFIAIS--------------FVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDS---LKNLE 343 (584)
Q Consensus 281 lt~kD~~dI~~al~~gvD~I~lS--------------fV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~a---v~Nld 343 (584)
++-+|.---+.+-+.|+|.|.++ .|.-.+-+..++... +..+ +.|++=+|+--+ ++|..
T Consensus 25 ~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~--r~~~--~pviaD~~~Gyg~~~~~~~~ 100 (255)
T 2qiw_A 25 PTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKIT--SAVS--IPVSVDVESGYGLSPADLIA 100 (255)
T ss_dssp CEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHH--HHCS--SCEEEECTTCTTCCHHHHHH
T ss_pred ecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHH--hcCC--CCEEeccCCCcCcHHHHHHH
Q ss_pred HHHHh-CCEEEEeCCc---ccccCCCCChHHHHHHHHHHHHHcCCC--eEEehhh-----------hHhhhcCCCCChhh
Q 007936 344 EIILA-SDGAMVARGD---LGAQIPLEQVPSAQQKIVQLCRQLNKP--VIVASQL-----------LESMIEYPTPTRAE 406 (584)
Q Consensus 344 eIl~~-sDGImIaRGD---Lg~ei~~e~V~~~Qk~II~~c~~~gKP--vivATqm-----------LeSMi~~p~PTrAE 406 (584)
.+++. ++||-|-=|. =..-+|.+++..-.+.+.++++..|.| |+--|.. ++..+. ||
T Consensus 101 ~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~-----ra- 174 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIK-----RI- 174 (255)
T ss_dssp HHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHH-----HH-
T ss_pred HHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHH-----HH-
Q ss_pred HHHHHHHHHcccceEee
Q 007936 407 VADVSEAVRQRADALML 423 (584)
Q Consensus 407 v~Dv~nav~~G~D~imL 423 (584)
.-+...|+|++++
T Consensus 175 ----~a~~eAGAd~i~~ 187 (255)
T 2qiw_A 175 ----KLMEQAGARSVYP 187 (255)
T ss_dssp ----HHHHHHTCSEEEE
T ss_pred ----HHHHHcCCcEEEE
No 483
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.81 E-value=2.5e+02 Score=28.16 Aligned_cols=86 Identities=17% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCEEEEeCCccc--ccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH-HHHHcccceEeecC
Q 007936 349 SDGAMVARGDLG--AQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS-EAVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDLg--~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~-nav~~G~D~imLs~ 425 (584)
+|||++. |=-| ..+..++-..+.+..++.+ -..|||+-| ...+-+|..+.+ .|-..|+|++|+..
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999884 2111 2223333333333344433 357888764 345556665555 46677999999963
Q ss_pred CCCCC-CChHHHHHHHHHHHHHHh
Q 007936 426 ESAMG-QFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G-~yPveaV~~m~~I~~~aE 448 (584)
... .-+.+.++..+.|+..+.
T Consensus 111 --P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 --PPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp --CTTCCSHHHHHHHHHHHHHHHC
T ss_pred --CCCCCCHHHHHHHHHHHHHhCC
Confidence 332 223567777888877765
No 484
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=24.79 E-value=1.1e+02 Score=30.19 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=41.4
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEeCCeEEEEEEcCceeC--CCceeeeccCCcccCCccccCCCCCccCHhhhHHhHhc
Q 007936 221 VKVGDELLVDGG---MVRFEVIEKIGPDVKCRCTDPGLLL--PRANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITE 295 (584)
Q Consensus 221 v~vGd~I~idDG---~i~l~V~~~~~~~i~c~v~~~G~l~--s~Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~ 295 (584)
+++||.|.+-|| ....++.+++++.+.+++...-... +.-.|. + ...+|.-.++-..-|+.+.++
T Consensus 33 l~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~i~-------L---~~al~K~~dr~d~iiqKatEL 102 (257)
T 3kw2_A 33 MQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRIT-------I---AIAPTKQSERMEWMLEKLVEI 102 (257)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCSSCSCEE-------E---EECCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCCCCCceE-------E---EEecCCCcchHHHHHHHHHhh
Confidence 678999999876 3466777788888877776532111 111122 1 011222113334456889999
Q ss_pred CCCEEE
Q 007936 296 GVDFIA 301 (584)
Q Consensus 296 gvD~I~ 301 (584)
||+-|.
T Consensus 103 GV~~I~ 108 (257)
T 3kw2_A 103 GVDEVV 108 (257)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 999755
No 485
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=24.78 E-value=99 Score=30.77 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=46.2
Q ss_pred HhhhHHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEE--eecCHHHHhcHHHHHHh-CCEEEEeC
Q 007936 286 WLDIDFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIA--KIESIDSLKNLEEIILA-SDGAMVAR 356 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiA--KIEt~~av~NldeIl~~-sDGImIaR 356 (584)
.+.+..+++.|+|+|.+.. -++++++++++.++.. ..+++|.| -| -.+|+.++++. +|+|-+|.
T Consensus 192 lee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~--~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAH--YPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHH--CTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhcc--CCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 4567888999999999987 4689999988888532 12344433 22 24688888877 89988864
No 486
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=24.71 E-value=72 Score=26.02 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=26.5
Q ss_pred hhcccCCCCEEEEeCCeeEEEEEEEeCCeEEEEEE
Q 007936 217 FAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCRCT 251 (584)
Q Consensus 217 ~~~~v~vGd~I~idDG~i~l~V~~~~~~~i~c~v~ 251 (584)
|.-.=++|..|.|+| .|.++|.++.++.+.-=+.
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qVrLGI~ 47 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQVRIGVN 47 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEEEEEEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEEEEEEE
Confidence 344458999999988 6999999999988765433
No 487
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=24.70 E-value=38 Score=33.82 Aligned_cols=61 Identities=26% Similarity=0.419 Sum_probs=39.0
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhcCCEEEEeCCCC--CHHHHHHHHHHHHHHHHHhCCceEEEee
Q 007936 106 RTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHG--TREWHRRVIERVRRLNEEKGFAVAIMMD 169 (584)
Q Consensus 106 ~tKIi~TiGPa~~~~e~l~~li~~Gm~v~RiN~sHg--~~e~~~~~i~~ir~~~~e~~~~i~I~lD 169 (584)
+-+=+|++-|.. +.+.|+++.+.|+..+|+|...+ ..-...++...++.+. + |.++-+.++
T Consensus 96 r~~Gva~vdp~~-~~~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~-~-gl~v~l~~~ 158 (303)
T 4d9a_A 96 KARGIAVVDPAI-DEAELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLP-A-GWHVVIYFE 158 (303)
T ss_dssp SEEEEECCCTTC-CHHHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCC-T-TCEEEEECC
T ss_pred cEEEEEEeCCCC-CHHHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHh-c-CCEEEEecc
Confidence 456667887754 57899999999999999999754 2112222333333333 3 766666543
No 488
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=24.70 E-value=1.6e+02 Score=30.08 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=53.9
Q ss_pred hcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceEEEeecCHHHHhcHHHHHHh--CCEEEEeCCcccccCCCCChHHH
Q 007936 294 TEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAVIAKIESIDSLKNLEEIILA--SDGAMVARGDLGAQIPLEQVPSA 371 (584)
Q Consensus 294 ~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~IiAKIEt~~av~NldeIl~~--sDGImIaRGDLg~ei~~e~V~~~ 371 (584)
+.|+ ||=-|+- +.+...++++. ..+.|++ =|+....+.+.++++. +|+|++.++-.|- ..-
T Consensus 214 ~~~i-~iE~P~~-~~~~~~~l~~~-------~~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG-------it~ 276 (379)
T 2rdx_A 214 DLDY-ILEQPCR-SYEECQQVRRV-------ADQPMKL-DECVTGLHMAQRIVADRGAEICCLKISNLGG-------LSK 276 (379)
T ss_dssp TSCC-EEECCSS-SHHHHHHHHTT-------CCSCEEE-CTTCCSHHHHHHHHHHTCCSEEEEETTTTTS-------HHH
T ss_pred hCCe-EEeCCcC-CHHHHHHHHhh-------CCCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEeccccCC-------HHH
Confidence 4688 8877765 44444444332 2356554 5776667778888765 8999997655532 233
Q ss_pred HHHHHHHHHHcCCCeEEeh
Q 007936 372 QQKIVQLCRQLNKPVIVAS 390 (584)
Q Consensus 372 Qk~II~~c~~~gKPvivAT 390 (584)
-.+|++.|+++|.++.+.+
T Consensus 277 ~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 277 ARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHcCCeEEEee
Confidence 4678999999999999864
No 489
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.54 E-value=1.6e+02 Score=24.35 Aligned_cols=61 Identities=11% Similarity=0.181 Sum_probs=38.5
Q ss_pred hcCCcEEEEccC----Cch-HHHHHhccCCCCcEEEEcCchhhhc-ccccccccEEEEecCCCCHHHH
Q 007936 487 NLEVDALFVYTK----TGH-MASLLSRCRPDCPIFAFTSTTSVRR-RLNLRWGLIPFRLSFSDDMESN 548 (584)
Q Consensus 487 ~l~a~aIvv~T~----sG~-tA~~lSr~RP~~PIiavT~~~~~aR-~l~l~~GV~P~~~~~~~d~~~~ 548 (584)
....++|++-.. +|. ..+.+-+..|.+|||.+|....... .-.+..|+.-++... .+.++.
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp-~~~~~l 113 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKP-VTAQDL 113 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESS-CCHHHH
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCC-CCHHHH
Confidence 456777776433 343 3455666779999999998765422 223667888888764 344443
No 490
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=24.53 E-value=1.1e+02 Score=29.82 Aligned_cols=71 Identities=15% Similarity=0.075 Sum_probs=41.8
Q ss_pred cCCCCEEEEeCC---eeEEEEEEEeCCeEEEEEEcCceeCCC--ceeeeccCCcccCCccccCCCCCccCHhhhHHhHhc
Q 007936 221 VKVGDELLVDGG---MVRFEVIEKIGPDVKCRCTDPGLLLPR--ANLTFWRDGSLVRERNAMLPTISPKDWLDIDFGITE 295 (584)
Q Consensus 221 v~vGd~I~idDG---~i~l~V~~~~~~~i~c~v~~~G~l~s~--Kgvnf~~~~~~lp~~~~~lp~lt~kD~~dI~~al~~ 295 (584)
+++||.|.+-|| ....+|.++.++.+.+++...-..... -.+. + ...+|. .++-..-|+.+.++
T Consensus 41 l~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~i~-------L---~~al~K-~~r~e~ilqkatEL 109 (234)
T 1z85_A 41 LKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKLS-------V---VVPIGR-WERTRFLIEKCVEL 109 (234)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSCEE-------E---EEECCC-HHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCceEE-------E---EEeccc-hHHHHHHHHHHHHh
Confidence 688999998765 455677788888877777643211111 1122 1 122332 23444456789999
Q ss_pred CCCEEEE
Q 007936 296 GVDFIAI 302 (584)
Q Consensus 296 gvD~I~l 302 (584)
||+-|..
T Consensus 110 GV~~I~p 116 (234)
T 1z85_A 110 GVDEIFF 116 (234)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9996543
No 491
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=24.40 E-value=89 Score=31.07 Aligned_cols=66 Identities=18% Similarity=0.105 Sum_probs=43.9
Q ss_pred HHhHhcCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCCceE-EEeecCHHH--------HhcHHHHHHh-CCEEEEeCCcc
Q 007936 290 DFGITEGVDFIAISFVKSAEVINHLKSYIAARSRDSDIAV-IAKIESIDS--------LKNLEEIILA-SDGAMVARGDL 359 (584)
Q Consensus 290 ~~al~~gvD~I~lSfV~saedV~~lr~~l~~~~~~~~i~I-iAKIEt~~a--------v~NldeIl~~-sDGImIaRGDL 359 (584)
+.+.+.|+|++.+| ++++..+|+.+ +.+..+ ..-|-- ++ +.++.+.++. +|.+++||+=+
T Consensus 151 ~~a~~~G~dGvV~s----~~e~~~ir~~~-----~~~f~~vtPGIr~-~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~ 220 (259)
T 3tfx_A 151 KMAKHSGADGVICS----PLEVKKLHENI-----GDDFLYVTPGIRP-AGNAKDDQSRVATPKMAKEWGSSAIVVGRPIT 220 (259)
T ss_dssp HHHHHTTCCEEECC----GGGHHHHHHHH-----CSSSEEEECCCCC-C-----------CHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHhCCCEEEEC----HHHHHHHHhhc-----CCccEEEcCCcCC-CCCCcCCccccCCHHHHHHcCCCEEEEChHHh
Confidence 44567899999887 78899999887 233333 344422 22 3357777777 99999999877
Q ss_pred cccCCC
Q 007936 360 GAQIPL 365 (584)
Q Consensus 360 g~ei~~ 365 (584)
..+=|.
T Consensus 221 ~a~dp~ 226 (259)
T 3tfx_A 221 LASDPK 226 (259)
T ss_dssp TSSSHH
T ss_pred CCCCHH
Confidence 665443
No 492
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=24.39 E-value=1.5e+02 Score=29.84 Aligned_cols=50 Identities=22% Similarity=0.214 Sum_probs=31.1
Q ss_pred HHHHHHHHHhcCCEEEEe-CCCCC----------H-HHHHHHHHHHHHHHHHhCCceEEEeecC
Q 007936 120 FEQLEALAVGGMNVARIN-MCHGT----------R-EWHRRVIERVRRLNEEKGFAVAIMMDTE 171 (584)
Q Consensus 120 ~e~l~~li~~Gm~v~RiN-~sHg~----------~-e~~~~~i~~ir~~~~e~~~~i~I~lDl~ 171 (584)
.+.|+.|.+.|+|++|+- |+++. + +...+.++.+=+..++.| +.+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G--i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG--IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT--CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 567899999999999996 33321 1 222334444444555655 66677764
No 493
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=24.38 E-value=3.6e+02 Score=26.59 Aligned_cols=89 Identities=13% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCEEEEeCCcc--cccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHH-HHHHcccceEeecC
Q 007936 349 SDGAMVARGDL--GAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVS-EAVRQRADALMLSG 425 (584)
Q Consensus 349 sDGImIaRGDL--g~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~-nav~~G~D~imLs~ 425 (584)
+||+++. |=- +..+..++-..+.+..++.++ -..|||+-+ ...+-.|..+.+ .|-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAGT---------GANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7999874 211 122333343333344444433 247888764 244455655544 46678999999974
Q ss_pred CCCCCCChHHHHHHHHHHHHHHh
Q 007936 426 ESAMGQFPDKALTVLRSVSLRIE 448 (584)
Q Consensus 426 ETa~G~yPveaV~~m~~I~~~aE 448 (584)
=--...-+.+.++..+.|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33222334667778888876664
No 494
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=24.26 E-value=2e+02 Score=28.55 Aligned_cols=94 Identities=9% Similarity=0.071 Sum_probs=50.8
Q ss_pred HHHHHh-CCEEEEeCCc--ccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHH-HHHccc
Q 007936 343 EEIILA-SDGAMVARGD--LGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE-AVRQRA 418 (584)
Q Consensus 343 deIl~~-sDGImIaRGD--Lg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~n-av~~G~ 418 (584)
+-.++. +||+++. |- =+..+..++-..+-+..++.++ -..|||+-| ...+-.|..+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGv---------g~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLAD-GRIPVIAGT---------GANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCccHHHHHHHHHHHHhcCC
Confidence 333444 7999874 21 1122333343333344444432 257888764 2445566655555 556799
Q ss_pred ceEeecCCCCCCCChHHHHHHHHHHHHHH
Q 007936 419 DALMLSGESAMGQFPDKALTVLRSVSLRI 447 (584)
Q Consensus 419 D~imLs~ETa~G~yPveaV~~m~~I~~~a 447 (584)
|++|+..=--...-+.+.++..+.|+..+
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999743322223455666766665444
No 495
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=24.19 E-value=57 Score=32.16 Aligned_cols=95 Identities=11% Similarity=0.199 Sum_probs=48.6
Q ss_pred HhhhHHhHhcCCCEEEEcCCCC-----H----HHHHHHHHH----HHhhcCCCCceEEEee-----cCHHHHhcHHHHHH
Q 007936 286 WLDIDFGITEGVDFIAISFVKS-----A----EVINHLKSY----IAARSRDSDIAVIAKI-----ESIDSLKNLEEIIL 347 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSfV~s-----a----edV~~lr~~----l~~~~~~~~i~IiAKI-----Et~~av~NldeIl~ 347 (584)
.++++.+.+.|++.++++-+.- . ++...+.++ .+ ..+ ..+++-+ +..+..+...+.++
T Consensus 14 ~~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~--~~~--~~v~~~~GiHP~~~~~~~~~~~~~l~ 89 (261)
T 3guw_A 14 FSELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCE--AAG--VKMHPAVGIHPRCIPPDYEFVLGYLE 89 (261)
T ss_dssp HHHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHH--TTT--CEECCBCCCCGGGCCTTTHHHHHHHT
T ss_pred hHHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHH--HCC--CCEEEEEEECcccccccHHHHHHHhC
Confidence 3578889999999988876442 2 223333321 21 111 1222211 11111222222232
Q ss_pred hCCEEEEeCCcccccCCCCChHHHHH----HHHHHHHHcCCCeEEeh
Q 007936 348 ASDGAMVARGDLGAQIPLEQVPSAQQ----KIVQLCRQLNKPVIVAS 390 (584)
Q Consensus 348 ~sDGImIaRGDLg~ei~~e~V~~~Qk----~II~~c~~~gKPvivAT 390 (584)
. + =.+|=|..|.+... ..|+ +.++.|++.|+||++.|
T Consensus 90 ~-~-~vvaIGEiGLD~~~----~~Q~~~f~~ql~lA~e~~lPv~iH~ 130 (261)
T 3guw_A 90 E-G-EWVAFGEIGLELVT----DEEIEVLKSQLELAKRMDVPCIIHT 130 (261)
T ss_dssp T-S-CCSCEEEEECSSCC----HHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred c-C-CeEEEEEecCCCCh----HHHHHHHHHHHHHHHHhCCeEEEEc
Confidence 2 2 23344555555543 4454 56788999999999985
No 496
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=24.19 E-value=3.9e+02 Score=23.98 Aligned_cols=125 Identities=14% Similarity=0.125 Sum_probs=66.0
Q ss_pred HhhhHHhHhcCCCEEEEcC--CCCHHHHHHHHHHHHhhcCCCCceEEEeecC-------------------HHHHhcHHH
Q 007936 286 WLDIDFGITEGVDFIAISF--VKSAEVINHLKSYIAARSRDSDIAVIAKIES-------------------IDSLKNLEE 344 (584)
Q Consensus 286 ~~dI~~al~~gvD~I~lSf--V~saedV~~lr~~l~~~~~~~~i~IiAKIEt-------------------~~av~Nlde 344 (584)
.+++..+++.|+|.++..- ++..+-+..+.+.+.. +. ++..++. ....+-+..
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~-----~~-~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~ 138 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGS-----QA-VVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVE 138 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTG-----GG-EEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCC-----Cc-eEEEeeecccCCcEEEEEeCCccccccCHHHHHHH
Confidence 6778889999999877653 4555666667666621 11 1111111 122233344
Q ss_pred HHHh-CC-EEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEe
Q 007936 345 IILA-SD-GAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALM 422 (584)
Q Consensus 345 Il~~-sD-GImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~im 422 (584)
+... +. -++.+.+.-|.--++. -+.|-+.+.....|+|..+- . +...|+..+...|+|+++
T Consensus 139 ~~~~~~~~vli~~~~~~g~~~g~~-----~~~i~~~~~~~~~Pvia~~g---------~---~~~~~~~~~~~~G~~~~~ 201 (237)
T 3cwo_X 139 VEKRGAGEILLTSIDRDGTKSGYD-----TEMIRFVRPLTTLPIIASGG---------A---GKMEHFLEAFLAGADAAL 201 (237)
T ss_dssp HHHHTCSEEEEEETTTTTCCSCCC-----HHHHHHHGGGCCSCEEEESC---------C---CSHHHHHHHHHHTCSEEE
T ss_pred HhhcCCCeEEEEecCCCCcccccc-----HHHHHHHHHhcCCCEEecCC---------C---CCHHHHHHHHHcCcHHHh
Confidence 4444 33 3444543333333332 22333344556899997642 2 223455666678999998
Q ss_pred ecCCCCCCCCh
Q 007936 423 LSGESAMGQFP 433 (584)
Q Consensus 423 Ls~ETa~G~yP 433 (584)
...---.|.+.
T Consensus 202 vg~a~~~~~~~ 212 (237)
T 3cwo_X 202 AASVFHFREID 212 (237)
T ss_dssp ESHHHHTTSSC
T ss_pred hhHHHHcCCCC
Confidence 76433234443
No 497
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=24.08 E-value=95 Score=30.97 Aligned_cols=47 Identities=23% Similarity=0.399 Sum_probs=36.9
Q ss_pred HHhcHHHHHHhCCEEEEeCCcccccCCCCChHHHHHHHHHHHHHcCCCeEEe
Q 007936 338 SLKNLEEIILASDGAMVARGDLGAQIPLEQVPSAQQKIVQLCRQLNKPVIVA 389 (584)
Q Consensus 338 av~NldeIl~~sDGImIaRGDLg~ei~~e~V~~~Qk~II~~c~~~gKPvivA 389 (584)
+.+-.+|+.+.+|++.|.-|-| -++........++.++++|||+++-
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl-----~~~~~~~m~~A~~~A~~~~~PvVLD 92 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCC-----ChHHHHHHHHHHHHHHHcCCCEEEc
Confidence 4467889999999999987765 3445556667788999999999975
No 498
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.01 E-value=1.7e+02 Score=23.71 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=41.9
Q ss_pred HhhcCCcEEEEccC----Cch-HHHHHhccCCCCcEEEEcCchhhhcc-cccccccEEEEecCCCCHHHHHHHHHHHHHH
Q 007936 485 ANNLEVDALFVYTK----TGH-MASLLSRCRPDCPIFAFTSTTSVRRR-LNLRWGLIPFRLSFSDDMESNLNRTFSLLKA 558 (584)
Q Consensus 485 A~~l~a~aIvv~T~----sG~-tA~~lSr~RP~~PIiavT~~~~~aR~-l~l~~GV~P~~~~~~~d~~~~i~~~~~~~k~ 558 (584)
..+...++|++-.. +|. ..+.+-+..|.+|||.+|........ -.+..|+.-++.+.. +.++ +..++..+.+
T Consensus 42 ~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~-~~~~-l~~~i~~~~~ 119 (134)
T 3f6c_A 42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKE-GMNN-IIAAIEAAKN 119 (134)
T ss_dssp HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGG-CTHH-HHHHHHHHHT
T ss_pred HHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCC-CHHH-HHHHHHHHHC
Confidence 34456787777433 343 34566677899999999987654322 235678888887653 3344 3444444443
No 499
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=23.98 E-value=1.6e+02 Score=29.75 Aligned_cols=38 Identities=8% Similarity=0.243 Sum_probs=27.2
Q ss_pred HhhcCCcEEEEccCCchHHHHHhccCCCCcEEEEcCchh
Q 007936 485 ANNLEVDALFVYTKTGHMASLLSRCRPDCPIFAFTSTTS 523 (584)
Q Consensus 485 A~~l~a~aIvv~T~sG~tA~~lSr~RP~~PIiavT~~~~ 523 (584)
-.+.+|++||+--..-..++.+++-= .+|+|.+-.-+.
T Consensus 170 ~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGaG~~ 207 (275)
T 1o66_A 170 HDDAGAAVVLMECVLAELAKKVTETV-SCPTIGIGAGAD 207 (275)
T ss_dssp HHHTTCSEEEEESCCHHHHHHHHHHC-SSCEEEESSCSC
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEECCCCC
Confidence 34569999998665556777787754 489999855443
No 500
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=23.91 E-value=1.7e+02 Score=30.94 Aligned_cols=119 Identities=10% Similarity=0.066 Sum_probs=70.2
Q ss_pred HHHHHHHHcCCCeEEehhhhHhhhcCCCCChhhHHHHHHHHHcccceEeecCCCCCCCChHHHHHHHHHHHHHHhhhhhh
Q 007936 374 KIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPDKALTVLRSVSLRIEKWWRE 453 (584)
Q Consensus 374 ~II~~c~~~gKPvivATqmLeSMi~~p~PTrAEv~Dv~nav~~G~D~imLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 453 (584)
-+...|++.|.++.+. .|..+....+...-..|++.+...+ .| -++++...+++.+-..
T Consensus 174 avA~~aa~~G~~~~Iv-----------mp~~~~~~k~~~~r~~GA~Vv~v~~-----~~-~~a~~~a~~~a~~~~~---- 232 (442)
T 3ss7_X 174 SIGIMSARIGFKVTVH-----------MSADARAWKKAKLRSHGVTVVEYEQ-----DY-GVAVEEGRKAAQSDPN---- 232 (442)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEESS-----CH-HHHHHHHHHHHHTCTT----
T ss_pred HHHHHHHHhCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECC-----CH-HHHHHHHHHHHHhCCC----
Confidence 5667899999998875 2333334456666678999776653 22 5566554444221111
Q ss_pred hhhhhcccCCCCCCCCCcChHHHHHHHHHHHHhhcC-----Cc-----EEEEccCCchHHHHHhc-----cCCCCcEEEE
Q 007936 454 EKRHEAMELPDVGSSFAESISEEICNSAAKMANNLE-----VD-----ALFVYTKTGHMASLLSR-----CRPDCPIFAF 518 (584)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~ia~sav~~A~~l~-----a~-----aIvv~T~sG~tA~~lSr-----~RP~~PIiav 518 (584)
.+..++ ..+..........+.++.+++. .+ .||+.+-+|.++.-+++ +.|.+.||++
T Consensus 233 -----~~~i~~---~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigV 304 (442)
T 3ss7_X 233 -----CFFIDD---ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFA 304 (442)
T ss_dssp -----EEECCT---TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred -----ceeCCC---CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEE
Confidence 111111 1111233334445566655542 34 89999999998876654 3799999999
Q ss_pred cCc
Q 007936 519 TST 521 (584)
Q Consensus 519 T~~ 521 (584)
-+.
T Consensus 305 ep~ 307 (442)
T 3ss7_X 305 EPT 307 (442)
T ss_dssp EET
T ss_pred EeC
Confidence 654
Done!