Query 007939
Match_columns 584
No_of_seqs 185 out of 1338
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 14:13:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 4E-199 1E-203 1600.6 35.7 527 31-580 2-529 (555)
2 1pj3_A NAD-dependent malic enz 100.0 3E-198 1E-202 1597.8 36.1 531 29-580 2-534 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 5E-198 2E-202 1600.6 34.4 531 24-578 31-564 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 7E-121 3E-125 973.7 34.7 391 106-578 44-444 (487)
5 2a9f_A Putative malic enzyme ( 100.0 3E-113 1E-117 905.0 19.7 368 106-562 19-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 3E-107 9E-112 858.8 24.9 360 106-558 23-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1E-83 3.5E-88 690.1 29.2 378 111-578 21-410 (439)
8 3h9u_A Adenosylhomocysteinase; 98.9 6.3E-09 2.2E-13 111.9 12.2 272 254-584 132-429 (436)
9 3gvp_A Adenosylhomocysteinase 98.8 2.8E-08 9.6E-13 106.8 12.2 127 289-457 182-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.3 1.3E-06 4.6E-11 92.4 9.5 227 155-447 25-295 (401)
11 3ond_A Adenosylhomocysteinase; 98.0 6.8E-05 2.3E-09 81.8 15.1 131 288-460 226-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.0 5.3E-05 1.8E-09 82.0 13.5 234 288-584 208-457 (464)
13 1l7d_A Nicotinamide nucleotide 97.1 0.0076 2.6E-07 63.0 14.7 238 155-446 18-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.7 0.00091 3.1E-08 71.4 4.1 111 324-453 191-322 (405)
15 3d4o_A Dipicolinate synthase s 96.2 0.04 1.4E-06 55.1 12.5 140 279-457 107-255 (293)
16 3k92_A NAD-GDH, NAD-specific g 96.0 0.073 2.5E-06 57.2 14.1 185 242-448 125-330 (424)
17 3p2y_A Alanine dehydrogenase/p 96.0 0.0046 1.6E-07 65.6 4.4 105 324-447 185-305 (381)
18 4fcc_A Glutamate dehydrogenase 95.7 0.37 1.3E-05 52.2 18.1 186 241-448 139-355 (450)
19 1a4i_A Methylenetetrahydrofola 95.7 0.015 5E-07 60.0 6.8 141 253-446 79-239 (301)
20 3l07_A Bifunctional protein fo 95.6 0.02 6.7E-07 58.6 7.3 130 253-428 78-224 (285)
21 3p2o_A Bifunctional protein fo 95.6 0.021 7.1E-07 58.5 7.3 130 253-428 77-223 (285)
22 3aoe_E Glutamate dehydrogenase 95.4 0.13 4.3E-06 55.3 13.0 181 243-448 123-324 (419)
23 4a5o_A Bifunctional protein fo 95.4 0.024 8.1E-07 58.1 7.0 142 253-447 79-237 (286)
24 4a26_A Putative C-1-tetrahydro 95.4 0.042 1.4E-06 56.6 8.7 130 253-428 81-230 (300)
25 3r3j_A Glutamate dehydrogenase 95.3 0.33 1.1E-05 52.6 16.0 191 243-459 145-368 (456)
26 1b0a_A Protein (fold bifunctio 95.2 0.022 7.4E-07 58.4 6.2 141 253-446 77-233 (288)
27 3aog_A Glutamate dehydrogenase 95.2 0.2 6.7E-06 54.2 13.8 183 243-448 140-345 (440)
28 3ngx_A Bifunctional protein fo 95.0 0.032 1.1E-06 56.9 6.7 128 253-428 70-213 (276)
29 3tri_A Pyrroline-5-carboxylate 94.9 0.18 6.1E-06 50.3 11.4 123 323-479 3-128 (280)
30 2yfq_A Padgh, NAD-GDH, NAD-spe 94.7 0.3 1E-05 52.3 13.3 183 243-447 116-326 (421)
31 2c2x_A Methylenetetrahydrofola 94.3 0.093 3.2E-06 53.6 8.0 158 208-446 60-234 (281)
32 1edz_A 5,10-methylenetetrahydr 93.6 0.055 1.9E-06 56.1 4.7 115 302-447 150-278 (320)
33 2bma_A Glutamate dehydrogenase 93.5 0.71 2.4E-05 50.2 13.4 181 244-448 159-373 (470)
34 1v8b_A Adenosylhomocysteinase; 93.5 0.36 1.2E-05 52.6 11.1 124 294-459 234-357 (479)
35 3don_A Shikimate dehydrogenase 93.1 0.066 2.3E-06 54.1 4.3 83 305-417 102-184 (277)
36 1c1d_A L-phenylalanine dehydro 93.0 0.25 8.6E-06 51.8 8.8 167 243-448 90-266 (355)
37 2tmg_A Protein (glutamate dehy 93.0 1.2 4.2E-05 47.6 14.1 183 244-448 115-320 (415)
38 2rir_A Dipicolinate synthase, 91.8 0.31 1.1E-05 48.7 7.4 109 312-457 149-257 (300)
39 2o4c_A Erythronate-4-phosphate 91.6 1.4 4.9E-05 46.4 12.5 223 263-539 56-292 (380)
40 3fbt_A Chorismate mutase and s 91.6 0.19 6.5E-06 50.9 5.5 99 252-367 47-155 (282)
41 3jyo_A Quinate/shikimate dehyd 91.4 0.21 7.3E-06 50.3 5.7 142 252-418 51-204 (283)
42 1pjc_A Protein (L-alanine dehy 91.4 0.38 1.3E-05 49.7 7.7 100 321-446 165-269 (361)
43 1gpj_A Glutamyl-tRNA reductase 91.4 1.3 4.3E-05 46.5 11.8 103 317-447 164-269 (404)
44 1bgv_A Glutamate dehydrogenase 91.4 3.5 0.00012 44.6 15.3 186 244-448 136-351 (449)
45 3tnl_A Shikimate dehydrogenase 91.3 0.22 7.7E-06 51.2 5.8 50 304-367 138-187 (315)
46 3ce6_A Adenosylhomocysteinase; 91.2 0.84 2.9E-05 49.8 10.5 109 312-459 266-374 (494)
47 3t4e_A Quinate/shikimate dehyd 91.2 0.22 7.5E-06 51.2 5.6 49 305-367 133-181 (312)
48 3d64_A Adenosylhomocysteinase; 91.1 0.44 1.5E-05 52.1 8.1 111 298-448 258-368 (494)
49 3mw9_A GDH 1, glutamate dehydr 91.0 1.5 5.1E-05 48.1 12.1 185 242-447 135-352 (501)
50 1v9l_A Glutamate dehydrogenase 90.9 0.72 2.5E-05 49.5 9.3 181 244-448 116-326 (421)
51 3tum_A Shikimate dehydrogenase 90.8 0.25 8.5E-06 49.7 5.5 47 306-366 111-157 (269)
52 3o8q_A Shikimate 5-dehydrogena 90.8 0.22 7.4E-06 50.3 5.0 99 252-367 50-159 (281)
53 1gtm_A Glutamate dehydrogenase 90.7 1.2 4.2E-05 47.5 10.9 112 244-371 115-250 (419)
54 1lu9_A Methylene tetrahydromet 90.2 1.1 3.9E-05 44.2 9.6 85 267-367 61-152 (287)
55 2egg_A AROE, shikimate 5-dehyd 90.0 0.24 8.3E-06 50.0 4.6 49 305-367 125-174 (297)
56 3pwz_A Shikimate dehydrogenase 89.9 0.23 7.7E-06 49.9 4.2 99 252-367 44-153 (272)
57 2ekl_A D-3-phosphoglycerate de 89.8 3.5 0.00012 41.9 13.1 163 261-465 64-251 (313)
58 2zyd_A 6-phosphogluconate dehy 89.8 0.49 1.7E-05 51.1 7.1 103 322-448 14-117 (480)
59 1pzg_A LDH, lactate dehydrogen 89.7 0.29 1E-05 50.2 5.0 126 324-470 10-157 (331)
60 3u95_A Glycoside hydrolase, fa 89.5 0.25 8.6E-06 53.5 4.5 46 424-473 140-185 (477)
61 3k5p_A D-3-phosphoglycerate de 89.4 3.3 0.00011 44.3 13.0 217 263-526 78-321 (416)
62 3dtt_A NADP oxidoreductase; st 89.4 0.49 1.7E-05 45.8 6.1 105 322-447 18-127 (245)
63 3oet_A Erythronate-4-phosphate 89.2 1.6 5.5E-05 46.2 10.2 129 297-468 96-232 (381)
64 3h8v_A Ubiquitin-like modifier 89.1 0.23 7.9E-06 50.7 3.6 38 316-367 32-69 (292)
65 2eez_A Alanine dehydrogenase; 89.0 1.3 4.4E-05 45.8 9.2 100 321-446 164-268 (369)
66 4e21_A 6-phosphogluconate dehy 88.9 1 3.5E-05 46.8 8.4 95 324-447 23-118 (358)
67 1p77_A Shikimate 5-dehydrogena 88.6 0.35 1.2E-05 47.9 4.5 49 304-367 103-151 (272)
68 3u62_A Shikimate dehydrogenase 88.3 0.44 1.5E-05 47.3 5.0 122 252-417 42-175 (253)
69 1nyt_A Shikimate 5-dehydrogena 88.2 0.53 1.8E-05 46.5 5.5 49 304-367 103-151 (271)
70 2gcg_A Glyoxylate reductase/hy 88.0 4 0.00014 41.5 12.1 146 264-445 75-247 (330)
71 1leh_A Leucine dehydrogenase; 87.9 0.82 2.8E-05 47.9 7.0 160 249-448 93-265 (364)
72 3gt0_A Pyrroline-5-carboxylate 87.6 1.4 4.9E-05 42.3 8.0 123 324-479 3-127 (247)
73 1mld_A Malate dehydrogenase; o 87.4 1.5 5.1E-05 44.6 8.4 102 325-448 2-121 (314)
74 1x0v_A GPD-C, GPDH-C, glycerol 87.3 1.5 5.3E-05 44.0 8.4 114 324-448 9-128 (354)
75 1wwk_A Phosphoglycerate dehydr 87.2 3.9 0.00013 41.4 11.4 149 261-446 62-234 (307)
76 2rcy_A Pyrroline carboxylate r 87.2 3.2 0.00011 39.7 10.2 92 324-449 5-96 (262)
77 2hk9_A Shikimate dehydrogenase 87.1 0.69 2.4E-05 45.8 5.6 82 305-417 114-195 (275)
78 3oj0_A Glutr, glutamyl-tRNA re 86.7 0.38 1.3E-05 42.5 3.1 91 324-447 22-113 (144)
79 3rui_A Ubiquitin-like modifier 86.7 0.33 1.1E-05 50.7 3.1 34 323-367 34-67 (340)
80 1txg_A Glycerol-3-phosphate de 86.4 1.2 4.1E-05 44.1 6.9 100 325-447 2-107 (335)
81 2izz_A Pyrroline-5-carboxylate 86.3 2.2 7.6E-05 42.9 9.0 101 324-449 23-123 (322)
82 2j6i_A Formate dehydrogenase; 86.3 3.9 0.00013 42.5 11.0 171 261-468 80-279 (364)
83 1sc6_A PGDH, D-3-phosphoglycer 85.6 9.6 0.00033 40.3 13.7 216 262-526 66-310 (404)
84 2p4q_A 6-phosphogluconate dehy 85.5 1.7 5.7E-05 47.2 8.0 101 324-448 11-113 (497)
85 1obb_A Maltase, alpha-glucosid 85.5 0.4 1.4E-05 52.2 3.1 129 323-470 3-174 (480)
86 2ewd_A Lactate dehydrogenase,; 85.4 0.37 1.3E-05 48.6 2.6 106 324-448 5-125 (317)
87 2iz1_A 6-phosphogluconate dehy 85.0 1.4 4.8E-05 47.2 7.1 101 324-448 6-107 (474)
88 3kkj_A Amine oxidase, flavin-c 85.0 0.5 1.7E-05 41.8 3.0 32 324-367 3-34 (336)
89 1hyh_A L-hicdh, L-2-hydroxyiso 85.0 1.4 5E-05 44.0 6.7 106 324-448 2-126 (309)
90 1t2d_A LDH-P, L-lactate dehydr 84.6 0.36 1.2E-05 49.3 2.2 129 324-474 5-155 (322)
91 2vhw_A Alanine dehydrogenase; 84.4 1.1 3.9E-05 46.5 5.9 99 320-444 165-268 (377)
92 2h78_A Hibadh, 3-hydroxyisobut 84.1 1.3 4.3E-05 43.8 5.8 32 324-367 4-35 (302)
93 4g2n_A D-isomer specific 2-hyd 83.6 5.7 0.00019 41.2 10.7 193 289-527 118-336 (345)
94 4gsl_A Ubiquitin-like modifier 83.6 0.61 2.1E-05 52.3 3.5 37 317-367 323-359 (615)
95 3i83_A 2-dehydropantoate 2-red 83.6 1.1 3.7E-05 45.1 5.1 104 324-448 3-109 (320)
96 2hjr_A Malate dehydrogenase; m 83.4 0.4 1.4E-05 49.1 1.9 129 324-474 15-160 (328)
97 3fef_A Putative glucosidase LP 83.4 2.8 9.4E-05 45.3 8.4 107 323-448 5-150 (450)
98 1yj8_A Glycerol-3-phosphate de 83.3 1.6 5.5E-05 44.7 6.4 114 324-448 22-145 (375)
99 3qsg_A NAD-binding phosphogluc 83.1 3.1 0.00011 41.7 8.3 33 324-367 25-57 (312)
100 3ba1_A HPPR, hydroxyphenylpyru 83.0 5.5 0.00019 40.9 10.3 113 298-448 123-255 (333)
101 1u8x_X Maltose-6'-phosphate gl 83.0 0.3 1E-05 52.9 0.8 130 324-470 29-194 (472)
102 3d1l_A Putative NADP oxidoredu 83.0 0.84 2.9E-05 44.1 3.9 96 324-448 11-106 (266)
103 2i6t_A Ubiquitin-conjugating e 82.8 3 0.0001 42.3 8.0 121 324-471 15-151 (303)
104 1npy_A Hypothetical shikimate 82.8 1.1 3.9E-05 44.7 4.8 48 305-367 105-152 (271)
105 2g1u_A Hypothetical protein TM 82.7 1.2 4.3E-05 39.6 4.7 32 324-367 20-51 (155)
106 2v6b_A L-LDH, L-lactate dehydr 82.4 0.83 2.9E-05 46.0 3.7 125 325-472 2-141 (304)
107 1bg6_A N-(1-D-carboxylethyl)-L 82.3 1.9 6.5E-05 43.1 6.3 100 324-445 5-110 (359)
108 4gwg_A 6-phosphogluconate dehy 82.0 3.1 0.00011 45.2 8.2 102 324-448 5-107 (484)
109 4b4u_A Bifunctional protein fo 82.0 5.1 0.00017 41.3 9.4 131 253-429 97-243 (303)
110 4dgs_A Dehydrogenase; structur 81.9 5.5 0.00019 41.3 9.7 128 298-465 129-277 (340)
111 1jw9_B Molybdopterin biosynthe 81.8 0.66 2.2E-05 45.5 2.7 34 324-368 32-65 (249)
112 3jtm_A Formate dehydrogenase, 81.8 5.6 0.00019 41.3 9.8 199 262-501 83-309 (351)
113 1ks9_A KPA reductase;, 2-dehyd 81.8 2.1 7.3E-05 41.2 6.3 100 325-448 2-101 (291)
114 1o6z_A MDH, malate dehydrogena 81.7 2.4 8.2E-05 42.7 6.8 124 325-471 2-145 (303)
115 1s6y_A 6-phospho-beta-glucosid 81.6 0.55 1.9E-05 50.5 2.2 131 324-470 8-175 (450)
116 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.4 1.6 5.4E-05 47.0 5.7 104 324-448 2-107 (478)
117 2pgd_A 6-phosphogluconate dehy 81.3 2.3 7.9E-05 45.6 6.9 101 324-448 3-105 (482)
118 1y6j_A L-lactate dehydrogenase 81.1 4.5 0.00016 41.1 8.7 115 324-460 8-136 (318)
119 3vh1_A Ubiquitin-like modifier 80.9 0.76 2.6E-05 51.4 3.1 37 317-367 324-360 (598)
120 1zud_1 Adenylyltransferase THI 80.8 0.67 2.3E-05 45.6 2.3 37 317-367 25-61 (251)
121 1b8p_A Protein (malate dehydro 80.8 1.9 6.4E-05 43.9 5.7 107 324-448 6-137 (329)
122 2zqz_A L-LDH, L-lactate dehydr 80.5 1.8 6E-05 44.4 5.4 114 324-460 10-138 (326)
123 1ez4_A Lactate dehydrogenase; 80.2 2 6.8E-05 43.8 5.7 114 324-460 6-134 (318)
124 3pef_A 6-phosphogluconate dehy 80.1 1.8 6.3E-05 42.4 5.2 32 324-367 2-33 (287)
125 2qrj_A Saccharopine dehydrogen 79.8 2.8 9.5E-05 44.7 6.8 71 323-430 214-289 (394)
126 3doj_A AT3G25530, dehydrogenas 79.7 2.4 8.3E-05 42.3 6.0 32 324-367 22-53 (310)
127 3h5n_A MCCB protein; ubiquitin 79.6 1 3.4E-05 46.8 3.2 37 317-367 115-151 (353)
128 3ggo_A Prephenate dehydrogenas 79.5 3.3 0.00011 41.9 7.0 34 324-367 34-67 (314)
129 4hy3_A Phosphoglycerate oxidor 79.3 4.8 0.00017 42.1 8.3 184 298-527 133-339 (365)
130 3b1f_A Putative prephenate deh 79.3 1.9 6.3E-05 42.2 4.9 97 324-447 7-104 (290)
131 3k96_A Glycerol-3-phosphate de 79.2 3.3 0.00011 42.8 7.0 105 324-448 30-137 (356)
132 2dpo_A L-gulonate 3-dehydrogen 78.9 2.7 9.1E-05 43.0 6.1 32 324-367 7-38 (319)
133 3ghy_A Ketopantoate reductase 78.7 1.4 4.9E-05 44.5 4.0 103 324-447 4-107 (335)
134 2cuk_A Glycerate dehydrogenase 78.7 10 0.00035 38.4 10.3 120 289-448 89-233 (311)
135 2d0i_A Dehydrogenase; structur 78.6 8.1 0.00028 39.5 9.7 90 320-445 143-236 (333)
136 2i99_A MU-crystallin homolog; 78.6 4.9 0.00017 40.5 7.9 99 324-454 136-237 (312)
137 4huj_A Uncharacterized protein 78.5 1.6 5.5E-05 41.4 4.1 93 324-448 24-117 (220)
138 3gvx_A Glycerate dehydrogenase 78.4 14 0.00049 37.2 11.3 160 319-527 118-281 (290)
139 3cky_A 2-hydroxymethyl glutara 78.4 2.1 7.3E-05 41.9 5.1 32 324-367 5-36 (301)
140 1x7d_A Ornithine cyclodeaminas 78.4 5.2 0.00018 41.4 8.2 118 306-456 117-239 (350)
141 1up7_A 6-phospho-beta-glucosid 78.4 2 6.9E-05 45.7 5.2 126 324-470 3-164 (417)
142 2yq5_A D-isomer specific 2-hyd 78.3 13 0.00043 38.6 11.0 134 289-459 94-251 (343)
143 3pdu_A 3-hydroxyisobutyrate de 78.3 2.2 7.4E-05 41.9 5.1 32 324-367 2-33 (287)
144 1mx3_A CTBP1, C-terminal bindi 78.2 19 0.00066 37.1 12.4 218 261-526 81-333 (347)
145 1xdw_A NAD+-dependent (R)-2-hy 78.1 6.4 0.00022 40.3 8.7 161 267-468 72-256 (331)
146 2d5c_A AROE, shikimate 5-dehyd 78.1 2 6.7E-05 41.9 4.7 47 305-367 102-148 (263)
147 3vrd_B FCCB subunit, flavocyto 78.0 1.5 5.2E-05 44.5 4.0 35 323-367 2-36 (401)
148 2dbq_A Glyoxylate reductase; D 77.6 7.1 0.00024 39.8 8.9 148 261-445 63-241 (334)
149 1y8q_A Ubiquitin-like 1 activa 77.1 1.3 4.3E-05 45.9 3.1 37 317-367 33-69 (346)
150 3pdi_B Nitrogenase MOFE cofact 77.1 2.8 9.6E-05 45.0 5.9 183 149-417 177-384 (458)
151 2pi1_A D-lactate dehydrogenase 77.1 9.3 0.00032 39.3 9.6 167 262-468 61-252 (334)
152 2d4a_B Malate dehydrogenase; a 77.0 1.3 4.5E-05 44.9 3.1 105 325-448 1-120 (308)
153 3hg7_A D-isomer specific 2-hyd 76.6 6 0.00021 40.7 8.0 178 299-527 103-302 (324)
154 2raf_A Putative dinucleotide-b 76.4 4.5 0.00015 38.2 6.5 32 324-367 20-51 (209)
155 2nac_A NAD-dependent formate d 76.4 5.8 0.0002 41.9 8.0 185 298-526 149-356 (393)
156 1smk_A Malate dehydrogenase, g 76.1 2 7E-05 43.7 4.3 104 324-448 9-129 (326)
157 4dll_A 2-hydroxy-3-oxopropiona 76.0 2.8 9.7E-05 42.1 5.3 32 324-367 32-63 (320)
158 1vpd_A Tartronate semialdehyde 75.8 2.3 8E-05 41.5 4.5 32 324-367 6-37 (299)
159 1dxy_A D-2-hydroxyisocaproate 75.7 12 0.00041 38.3 9.9 142 288-468 91-255 (333)
160 1hyu_A AHPF, alkyl hydroperoxi 75.5 0.81 2.8E-05 49.2 1.2 103 251-367 134-244 (521)
161 1j4a_A D-LDH, D-lactate dehydr 75.4 11 0.00037 38.5 9.5 143 288-468 93-257 (333)
162 2uyy_A N-PAC protein; long-cha 74.9 3.4 0.00012 40.9 5.5 32 324-367 31-62 (316)
163 3qha_A Putative oxidoreductase 74.9 3.5 0.00012 40.9 5.6 32 324-367 16-47 (296)
164 1a5z_A L-lactate dehydrogenase 74.9 3.2 0.00011 42.0 5.3 105 325-449 2-121 (319)
165 3evt_A Phosphoglycerate dehydr 74.9 9.9 0.00034 39.0 9.1 220 261-526 57-300 (324)
166 3vku_A L-LDH, L-lactate dehydr 74.7 4 0.00014 42.0 6.1 114 324-460 10-138 (326)
167 1guz_A Malate dehydrogenase; o 74.6 1.2 4E-05 45.0 2.0 106 325-448 2-122 (310)
168 1hdo_A Biliverdin IX beta redu 74.5 6.4 0.00022 35.3 6.8 98 323-443 3-110 (206)
169 3c24_A Putative oxidoreductase 74.5 2.4 8.2E-05 41.6 4.2 93 324-448 12-105 (286)
170 1ldn_A L-lactate dehydrogenase 74.4 1.4 4.7E-05 44.7 2.5 106 324-448 7-127 (316)
171 1oju_A MDH, malate dehydrogena 74.1 3.1 0.00011 42.1 5.0 115 325-460 2-131 (294)
172 1ur5_A Malate dehydrogenase; o 73.8 1.9 6.5E-05 43.6 3.4 106 324-448 3-123 (309)
173 3hn2_A 2-dehydropantoate 2-red 73.4 2.4 8.2E-05 42.3 4.0 104 324-448 3-107 (312)
174 4fgw_A Glycerol-3-phosphate de 73.2 8.3 0.00028 40.8 8.2 95 324-432 35-139 (391)
175 1yb4_A Tartronic semialdehyde 73.2 3.2 0.00011 40.4 4.7 21 324-344 4-24 (295)
176 2w2k_A D-mandelate dehydrogena 73.2 13 0.00045 38.2 9.5 112 320-466 160-276 (348)
177 2xxj_A L-LDH, L-lactate dehydr 73.1 2.4 8.4E-05 43.0 4.0 113 325-460 2-129 (310)
178 2cvz_A Dehydrogenase, 3-hydrox 73.0 2 7E-05 41.5 3.2 30 325-367 3-32 (289)
179 1nvt_A Shikimate 5'-dehydrogen 72.6 3.3 0.00011 41.1 4.7 49 303-367 111-159 (287)
180 2pv7_A T-protein [includes: ch 72.2 6.6 0.00023 39.0 6.8 32 324-367 22-54 (298)
181 3phh_A Shikimate dehydrogenase 72.0 2 6.9E-05 43.2 3.0 43 306-367 108-150 (269)
182 3g0o_A 3-hydroxyisobutyrate de 72.0 2 6.7E-05 42.7 2.9 32 324-367 8-39 (303)
183 3d1c_A Flavin-containing putat 71.5 2.4 8.2E-05 41.9 3.4 34 324-368 5-38 (369)
184 2g76_A 3-PGDH, D-3-phosphoglyc 70.9 18 0.00062 37.2 9.9 126 288-448 112-259 (335)
185 1tt5_B Ubiquitin-activating en 70.8 1.8 6E-05 46.5 2.4 33 324-367 41-73 (434)
186 3gvi_A Malate dehydrogenase; N 70.7 2.8 9.7E-05 43.0 3.8 106 324-448 8-128 (324)
187 2g5c_A Prephenate dehydrogenas 70.4 6.9 0.00024 37.9 6.4 99 324-448 2-100 (281)
188 1qp8_A Formate dehydrogenase; 70.2 20 0.00069 36.1 10.0 143 262-445 47-211 (303)
189 4hb9_A Similarities with proba 70.2 2.5 8.4E-05 42.1 3.2 32 324-367 2-33 (412)
190 4e5n_A Thermostable phosphite 69.2 7.2 0.00025 40.0 6.5 145 288-468 90-258 (330)
191 3fi9_A Malate dehydrogenase; s 69.1 4.4 0.00015 42.0 4.9 118 321-461 6-140 (343)
192 3kb6_A D-lactate dehydrogenase 68.9 18 0.00063 37.1 9.5 121 289-445 88-231 (334)
193 4a9w_A Monooxygenase; baeyer-v 68.9 2.2 7.7E-05 41.4 2.5 34 323-368 3-36 (357)
194 3fbs_A Oxidoreductase; structu 68.8 3 0.0001 39.6 3.3 32 324-367 3-34 (297)
195 2z2v_A Hypothetical protein PH 68.7 4.8 0.00016 41.7 5.1 121 324-476 17-137 (365)
196 1hye_A L-lactate/malate dehydr 68.2 5.1 0.00017 40.4 5.0 127 325-471 2-148 (313)
197 4egb_A DTDP-glucose 4,6-dehydr 68.1 11 0.00036 37.1 7.2 104 324-444 25-149 (346)
198 1y8q_B Anthracycline-, ubiquit 67.6 2.5 8.5E-05 47.6 2.8 33 324-367 18-50 (640)
199 3m6i_A L-arabinitol 4-dehydrog 67.5 6.8 0.00023 39.6 5.8 58 294-366 155-212 (363)
200 3d0o_A L-LDH 1, L-lactate dehy 67.0 5.7 0.00019 40.3 5.1 115 324-460 7-136 (317)
201 3f8d_A Thioredoxin reductase ( 66.7 3.5 0.00012 39.5 3.3 32 324-367 16-47 (323)
202 3gg9_A D-3-phosphoglycerate de 66.6 17 0.00059 37.6 8.7 197 288-527 98-325 (352)
203 4ej6_A Putative zinc-binding d 66.4 10 0.00036 38.6 7.0 108 295-430 159-274 (370)
204 4eez_A Alcohol dehydrogenase 1 66.2 9.9 0.00034 37.9 6.7 49 303-366 148-196 (348)
205 3pp8_A Glyoxylate/hydroxypyruv 66.0 13 0.00043 38.0 7.5 218 264-527 58-301 (315)
206 3iwa_A FAD-dependent pyridine 66.0 3.6 0.00012 43.0 3.6 36 324-369 4-39 (472)
207 1pl8_A Human sorbitol dehydrog 65.6 8.3 0.00028 38.9 6.0 49 303-366 156-204 (356)
208 3fg2_P Putative rubredoxin red 65.5 5.4 0.00019 40.8 4.7 37 324-370 2-38 (404)
209 3tl2_A Malate dehydrogenase; c 65.5 2 6.8E-05 44.0 1.4 115 324-460 9-140 (315)
210 2zbw_A Thioredoxin reductase; 65.4 3.7 0.00013 40.0 3.3 33 324-368 6-38 (335)
211 2hmt_A YUAA protein; RCK, KTN, 65.4 3.2 0.00011 35.2 2.5 32 324-367 7-38 (144)
212 3lzw_A Ferredoxin--NADP reduct 65.3 3.7 0.00013 39.6 3.2 32 324-367 8-39 (332)
213 3hyw_A Sulfide-quinone reducta 65.1 4 0.00014 42.4 3.7 34 324-367 3-36 (430)
214 3l6d_A Putative oxidoreductase 65.1 5.2 0.00018 39.9 4.4 32 324-367 10-41 (306)
215 3c85_A Putative glutathione-re 64.8 4.6 0.00016 36.6 3.6 34 323-367 39-72 (183)
216 3h8l_A NADH oxidase; membrane 64.7 4.2 0.00014 41.5 3.6 36 324-368 2-37 (409)
217 3fwz_A Inner membrane protein 64.6 5 0.00017 35.1 3.7 32 324-367 8-39 (140)
218 4ezb_A Uncharacterized conserv 64.6 6.3 0.00022 39.7 4.9 33 324-367 25-57 (317)
219 3p7m_A Malate dehydrogenase; p 64.4 2.1 7.1E-05 43.9 1.3 117 323-461 5-136 (321)
220 1np3_A Ketol-acid reductoisome 64.3 5.8 0.0002 40.4 4.6 87 324-441 17-104 (338)
221 1id1_A Putative potassium chan 64.1 4.7 0.00016 35.6 3.4 33 323-367 3-35 (153)
222 3llv_A Exopolyphosphatase-rela 64.0 4.2 0.00015 35.1 3.1 32 324-367 7-38 (141)
223 3ip1_A Alcohol dehydrogenase, 63.9 21 0.00072 36.7 8.8 72 324-418 215-292 (404)
224 3itj_A Thioredoxin reductase 1 63.9 3.1 0.00011 40.2 2.4 32 324-367 23-54 (338)
225 2gf2_A Hibadh, 3-hydroxyisobut 63.9 9.1 0.00031 37.2 5.8 31 325-367 2-32 (296)
226 3ic5_A Putative saccharopine d 63.0 4.1 0.00014 33.3 2.7 85 324-432 6-91 (118)
227 3ldh_A Lactate dehydrogenase; 62.5 2.6 9E-05 43.6 1.6 116 324-461 22-152 (330)
228 3lxd_A FAD-dependent pyridine 62.5 6.9 0.00024 40.1 4.8 36 324-369 10-45 (415)
229 2ywl_A Thioredoxin reductase r 62.4 5 0.00017 35.8 3.3 32 324-367 2-33 (180)
230 1y7t_A Malate dehydrogenase; N 62.1 3.6 0.00012 41.4 2.5 110 324-447 5-133 (327)
231 3oz2_A Digeranylgeranylglycero 61.9 4.2 0.00015 40.0 3.0 31 325-367 6-36 (397)
232 2q7v_A Thioredoxin reductase; 61.6 4.9 0.00017 39.2 3.3 32 324-367 9-40 (325)
233 3axb_A Putative oxidoreductase 61.5 6.9 0.00024 40.2 4.6 32 324-366 24-55 (448)
234 3cgv_A Geranylgeranyl reductas 61.5 3.8 0.00013 40.8 2.6 34 324-369 5-38 (397)
235 3nep_X Malate dehydrogenase; h 61.2 3.9 0.00013 41.8 2.7 115 325-460 2-131 (314)
236 3ef6_A Toluene 1,2-dioxygenase 61.1 7.9 0.00027 39.8 5.0 37 324-370 3-39 (410)
237 1pqw_A Polyketide synthase; ro 61.1 14 0.00048 33.6 6.2 50 303-367 22-72 (198)
238 1lss_A TRK system potassium up 60.9 5.9 0.0002 33.4 3.3 32 324-367 5-36 (140)
239 3pdi_A Nitrogenase MOFE cofact 60.9 6.2 0.00021 42.6 4.3 191 149-416 210-409 (483)
240 3kd9_A Coenzyme A disulfide re 60.7 6.1 0.00021 41.1 4.1 36 323-368 3-38 (449)
241 2xdo_A TETX2 protein; tetracyc 60.7 4.8 0.00016 40.9 3.2 33 324-368 27-59 (398)
242 4a7p_A UDP-glucose dehydrogena 60.7 10 0.00035 40.6 5.8 54 400-454 108-166 (446)
243 3hdj_A Probable ornithine cycl 60.6 58 0.002 33.0 11.2 103 324-458 122-228 (313)
244 3r9u_A Thioredoxin reductase; 60.5 4.8 0.00016 38.5 3.0 32 324-367 5-37 (315)
245 3alj_A 2-methyl-3-hydroxypyrid 60.3 5.2 0.00018 40.3 3.3 34 324-369 12-45 (379)
246 1ryi_A Glycine oxidase; flavop 60.1 5 0.00017 39.9 3.2 34 324-369 18-51 (382)
247 2vdc_G Glutamate synthase [NAD 60.0 5.6 0.00019 42.2 3.7 33 323-367 122-154 (456)
248 2gqw_A Ferredoxin reductase; f 59.7 6.4 0.00022 40.6 4.0 37 324-370 8-44 (408)
249 3rp8_A Flavoprotein monooxygen 59.7 5.5 0.00019 40.4 3.5 34 323-368 23-56 (407)
250 3s5w_A L-ornithine 5-monooxyge 59.7 6.3 0.00021 40.7 3.9 39 324-369 31-69 (463)
251 3dme_A Conserved exported prot 59.6 5.7 0.0002 38.8 3.4 32 324-367 5-36 (369)
252 3cty_A Thioredoxin reductase; 59.5 5.6 0.00019 38.7 3.3 32 324-367 17-48 (319)
253 3ab1_A Ferredoxin--NADP reduct 59.4 5.7 0.00019 39.4 3.4 33 324-368 15-47 (360)
254 3ado_A Lambda-crystallin; L-gu 59.4 5.2 0.00018 41.1 3.2 31 324-366 7-37 (319)
255 4e12_A Diketoreductase; oxidor 59.3 5.4 0.00019 39.2 3.2 32 324-367 5-36 (283)
256 1yvv_A Amine oxidase, flavin-c 59.1 5.3 0.00018 38.9 3.1 33 324-368 3-35 (336)
257 2nvu_B Maltose binding protein 59.1 3.6 0.00012 46.7 2.1 35 322-367 410-444 (805)
258 4a2c_A Galactitol-1-phosphate 59.0 17 0.00058 36.1 6.8 55 297-366 139-193 (346)
259 3fys_A Protein DEGV; fatty aci 58.5 6.2 0.00021 40.5 3.6 153 147-358 16-179 (315)
260 1y56_B Sarcosine oxidase; dehy 58.3 5.4 0.00018 39.8 3.0 33 324-368 6-38 (382)
261 3c96_A Flavin-containing monoo 58.3 6.1 0.00021 40.3 3.5 34 324-368 5-38 (410)
262 2vou_A 2,6-dihydroxypyridine h 57.9 6.4 0.00022 39.9 3.6 33 324-368 6-38 (397)
263 2gf3_A MSOX, monomeric sarcosi 57.8 6.1 0.00021 39.3 3.3 35 324-370 4-38 (389)
264 3pqe_A L-LDH, L-lactate dehydr 57.6 5.6 0.00019 40.9 3.1 115 324-460 6-135 (326)
265 2jae_A L-amino acid oxidase; o 57.5 5.3 0.00018 41.6 3.0 34 324-369 12-45 (489)
266 1lqt_A FPRA; NADP+ derivative, 57.5 6.5 0.00022 41.6 3.7 38 323-367 3-42 (456)
267 3ics_A Coenzyme A-disulfide re 57.1 7.2 0.00025 42.1 4.0 37 324-370 37-73 (588)
268 4eqs_A Coenzyme A disulfide re 57.1 9.1 0.00031 40.0 4.7 34 325-368 2-35 (437)
269 4g6h_A Rotenone-insensitive NA 57.1 3.6 0.00012 44.2 1.7 32 324-367 43-74 (502)
270 1tt5_A APPBP1, amyloid protein 56.7 3.7 0.00013 45.1 1.6 37 317-367 29-65 (531)
271 2gag_B Heterotetrameric sarcos 56.7 6.7 0.00023 39.2 3.4 35 324-368 22-56 (405)
272 2x3n_A Probable FAD-dependent 56.5 6.2 0.00021 39.8 3.2 33 324-368 7-39 (399)
273 3lk7_A UDP-N-acetylmuramoylala 56.5 7.2 0.00025 41.2 3.8 26 320-345 6-31 (451)
274 2x0j_A Malate dehydrogenase; o 56.5 11 0.00038 38.2 5.1 115 325-460 2-131 (294)
275 2uzz_A N-methyl-L-tryptophan o 56.3 6 0.0002 39.2 3.0 35 324-370 3-37 (372)
276 3k7m_X 6-hydroxy-L-nicotine ox 56.3 6.8 0.00023 39.8 3.5 32 324-367 2-33 (431)
277 3nix_A Flavoprotein/dehydrogen 56.1 5.4 0.00019 40.3 2.7 33 324-368 6-38 (421)
278 3fpc_A NADP-dependent alcohol 56.0 7.1 0.00024 39.3 3.5 49 303-366 151-199 (352)
279 2dq4_A L-threonine 3-dehydroge 56.0 9.6 0.00033 38.2 4.4 98 303-430 149-252 (343)
280 2q0l_A TRXR, thioredoxin reduc 55.9 6.9 0.00024 37.7 3.3 33 324-367 2-34 (311)
281 1c0p_A D-amino acid oxidase; a 55.7 8 0.00027 38.5 3.8 33 324-368 7-39 (363)
282 1f0y_A HCDH, L-3-hydroxyacyl-C 55.7 6.7 0.00023 38.7 3.2 32 324-367 16-47 (302)
283 2cul_A Glucose-inhibited divis 55.7 6.9 0.00024 36.9 3.2 32 324-367 4-35 (232)
284 1ygy_A PGDH, D-3-phosphoglycer 55.6 33 0.0011 37.2 8.9 122 289-445 90-233 (529)
285 3nrc_A Enoyl-[acyl-carrier-pro 55.5 7.6 0.00026 37.7 3.5 86 320-419 23-114 (280)
286 1zk7_A HGII, reductase, mercur 55.3 7.4 0.00025 40.6 3.6 32 324-367 5-36 (467)
287 2bc0_A NADH oxidase; flavoprot 55.2 9.5 0.00032 40.3 4.5 36 324-368 36-71 (490)
288 4ina_A Saccharopine dehydrogen 55.1 7.7 0.00026 40.5 3.7 102 324-445 2-108 (405)
289 1vdc_A NTR, NADPH dependent th 55.0 5.6 0.00019 38.7 2.5 31 324-366 9-39 (333)
290 3c4a_A Probable tryptophan hyd 54.9 8.2 0.00028 39.0 3.8 34 325-368 2-35 (381)
291 3ek2_A Enoyl-(acyl-carrier-pro 54.9 8.8 0.0003 36.4 3.8 38 320-367 11-49 (271)
292 2oln_A NIKD protein; flavoprot 54.8 7.2 0.00025 39.2 3.3 35 324-370 5-39 (397)
293 2xve_A Flavin-containing monoo 54.8 6.7 0.00023 41.3 3.2 38 324-367 3-40 (464)
294 3gg2_A Sugar dehydrogenase, UD 54.7 20 0.00068 38.2 6.9 32 324-367 3-34 (450)
295 3qy9_A DHPR, dihydrodipicolina 54.0 29 0.001 34.1 7.5 21 324-344 4-24 (243)
296 3oc4_A Oxidoreductase, pyridin 54.0 8 0.00027 40.3 3.6 36 324-369 3-38 (452)
297 1k0i_A P-hydroxybenzoate hydro 53.7 7.9 0.00027 38.9 3.4 33 324-368 3-35 (394)
298 3uox_A Otemo; baeyer-villiger 53.6 8.1 0.00028 41.9 3.7 33 324-368 10-42 (545)
299 3i6d_A Protoporphyrinogen oxid 53.4 10 0.00035 38.7 4.2 23 324-346 6-28 (470)
300 3dje_A Fructosyl amine: oxygen 53.4 8.1 0.00028 39.5 3.5 36 324-370 7-42 (438)
301 3i3l_A Alkylhalidase CMLS; fla 53.2 7.9 0.00027 42.6 3.6 34 322-367 22-55 (591)
302 3c4n_A Uncharacterized protein 53.2 9.5 0.00033 39.0 4.0 35 324-368 37-71 (405)
303 3cmm_A Ubiquitin-activating en 53.1 7.4 0.00025 46.1 3.5 37 317-367 24-60 (1015)
304 2d8a_A PH0655, probable L-thre 53.1 9.3 0.00032 38.4 3.8 48 303-366 153-200 (348)
305 3ntd_A FAD-dependent pyridine 52.7 8.6 0.00029 41.0 3.6 36 324-369 2-37 (565)
306 1e3j_A NADP(H)-dependent ketos 52.7 17 0.00057 36.5 5.6 48 303-366 153-200 (352)
307 2weu_A Tryptophan 5-halogenase 52.7 7.5 0.00026 40.9 3.2 37 324-369 3-39 (511)
308 1dxl_A Dihydrolipoamide dehydr 52.6 9.3 0.00032 39.7 3.8 32 324-367 7-38 (470)
309 4id9_A Short-chain dehydrogena 52.4 26 0.00089 34.3 6.9 95 321-444 17-126 (347)
310 3g3e_A D-amino-acid oxidase; F 52.4 12 0.0004 37.1 4.4 37 325-368 2-39 (351)
311 3h28_A Sulfide-quinone reducta 52.4 7.9 0.00027 39.9 3.2 35 324-368 3-37 (430)
312 1trb_A Thioredoxin reductase; 52.2 5.9 0.0002 38.2 2.1 32 324-367 6-37 (320)
313 3fpz_A Thiazole biosynthetic e 52.2 13 0.00044 36.8 4.6 34 324-367 66-99 (326)
314 3urh_A Dihydrolipoyl dehydroge 52.1 8.2 0.00028 40.6 3.4 33 324-368 26-58 (491)
315 1m6i_A Programmed cell death p 52.0 13 0.00044 39.5 4.9 36 324-369 12-47 (493)
316 4ap3_A Steroid monooxygenase; 51.8 7.9 0.00027 42.1 3.2 33 324-368 22-54 (549)
317 2cdu_A NADPH oxidase; flavoenz 51.7 9.8 0.00034 39.5 3.8 34 325-368 2-35 (452)
318 3abi_A Putative uncharacterize 51.7 12 0.00039 38.3 4.3 93 324-445 17-109 (365)
319 3cgb_A Pyridine nucleotide-dis 51.6 9.5 0.00033 40.2 3.8 37 324-370 37-73 (480)
320 3sx6_A Sulfide-quinone reducta 51.6 8.3 0.00028 40.0 3.2 36 324-368 5-40 (437)
321 4f3y_A DHPR, dihydrodipicolina 51.6 42 0.0014 33.5 8.3 95 323-441 7-102 (272)
322 4gcm_A TRXR, thioredoxin reduc 51.5 8.5 0.00029 37.3 3.1 31 325-367 8-38 (312)
323 2qcu_A Aerobic glycerol-3-phos 51.4 8.1 0.00028 41.0 3.2 33 324-368 4-36 (501)
324 1xdi_A RV3303C-LPDA; reductase 51.4 9.4 0.00032 40.3 3.7 36 324-368 3-38 (499)
325 2a8x_A Dihydrolipoyl dehydroge 51.3 7.5 0.00026 40.5 2.9 32 324-367 4-35 (464)
326 1nhp_A NADH peroxidase; oxidor 51.2 10 0.00035 39.3 3.9 35 325-369 2-36 (447)
327 3k30_A Histamine dehydrogenase 51.1 10 0.00034 42.2 4.0 33 324-368 392-424 (690)
328 2eq6_A Pyruvate dehydrogenase 51.1 7.9 0.00027 40.6 3.0 33 324-368 7-39 (464)
329 3ihm_A Styrene monooxygenase A 50.8 8.2 0.00028 40.0 3.1 32 324-367 23-54 (430)
330 3ka7_A Oxidoreductase; structu 50.5 9.6 0.00033 38.5 3.5 32 325-368 2-33 (425)
331 2a87_A TRXR, TR, thioredoxin r 50.3 7.6 0.00026 38.2 2.6 32 324-367 15-46 (335)
332 3hhp_A Malate dehydrogenase; M 50.3 18 0.00062 36.8 5.5 105 325-448 2-122 (312)
333 3nrn_A Uncharacterized protein 50.2 9.7 0.00033 38.8 3.5 32 325-368 2-33 (421)
334 2r9z_A Glutathione amide reduc 50.2 9.8 0.00033 39.9 3.6 32 324-367 5-36 (463)
335 2yqu_A 2-oxoglutarate dehydrog 50.2 9.2 0.00032 39.7 3.3 33 324-368 2-34 (455)
336 3lov_A Protoporphyrinogen oxid 50.2 12 0.00041 38.6 4.2 35 323-367 4-38 (475)
337 1zmd_A Dihydrolipoyl dehydroge 50.0 9.2 0.00032 40.0 3.3 33 324-368 7-39 (474)
338 2hqm_A GR, grase, glutathione 49.8 8.9 0.0003 40.4 3.2 32 324-367 12-43 (479)
339 2e4g_A Tryptophan halogenase; 49.7 8.8 0.0003 41.3 3.2 37 324-369 26-62 (550)
340 1mo9_A ORF3; nucleotide bindin 49.5 9.2 0.00032 40.9 3.3 33 324-368 44-76 (523)
341 1fl2_A Alkyl hydroperoxide red 49.4 8.7 0.0003 36.9 2.8 32 324-367 2-33 (310)
342 2nu8_A Succinyl-COA ligase [AD 49.3 37 0.0012 33.9 7.4 78 324-432 8-86 (288)
343 2gv8_A Monooxygenase; FMO, FAD 49.3 14 0.00048 38.3 4.5 34 324-367 7-40 (447)
344 2qae_A Lipoamide, dihydrolipoy 49.1 10 0.00035 39.6 3.4 33 324-368 3-35 (468)
345 1ebd_A E3BD, dihydrolipoamide 48.9 8.8 0.0003 39.9 2.9 32 324-367 4-35 (455)
346 1yqd_A Sinapyl alcohol dehydro 48.8 24 0.00082 35.8 6.1 47 305-366 173-219 (366)
347 3dfz_A SIRC, precorrin-2 dehyd 48.7 7.7 0.00026 37.9 2.3 35 321-367 29-63 (223)
348 3qj4_A Renalase; FAD/NAD(P)-bi 48.5 6.6 0.00023 38.8 1.8 35 324-367 2-36 (342)
349 3r6d_A NAD-dependent epimerase 48.4 11 0.00037 34.7 3.2 95 324-442 6-106 (221)
350 3v76_A Flavoprotein; structura 48.3 9.1 0.00031 40.1 3.0 34 324-369 28-61 (417)
351 2dph_A Formaldehyde dismutase; 48.0 26 0.00088 35.9 6.2 49 303-366 170-218 (398)
352 1ges_A Glutathione reductase; 47.9 9 0.00031 40.0 2.8 32 324-367 5-36 (450)
353 2aqj_A Tryptophan halogenase, 47.9 9.8 0.00033 40.6 3.2 36 324-368 6-41 (538)
354 1q1r_A Putidaredoxin reductase 47.7 11 0.00038 39.1 3.5 36 324-369 5-40 (431)
355 1w4x_A Phenylacetone monooxyge 47.7 10 0.00035 40.7 3.3 33 324-368 17-49 (542)
356 2bry_A NEDD9 interacting prote 47.4 11 0.00039 40.1 3.6 34 324-369 93-126 (497)
357 2o7s_A DHQ-SDH PR, bifunctiona 47.4 14 0.00049 39.9 4.4 34 322-367 363-396 (523)
358 4b63_A L-ornithine N5 monooxyg 47.3 9.7 0.00033 40.6 3.0 23 325-347 41-63 (501)
359 1v59_A Dihydrolipoamide dehydr 46.7 12 0.00042 39.0 3.6 33 324-368 6-38 (478)
360 1onf_A GR, grase, glutathione 46.6 11 0.00036 40.1 3.1 33 324-368 3-35 (500)
361 2cdc_A Glucose dehydrogenase g 46.5 30 0.001 34.9 6.4 32 324-367 182-213 (366)
362 1wly_A CAAR, 2-haloacrylate re 46.4 24 0.00083 35.0 5.6 52 301-367 127-179 (333)
363 2bi7_A UDP-galactopyranose mut 46.4 11 0.00037 38.8 3.1 34 323-368 3-36 (384)
364 3l8k_A Dihydrolipoyl dehydroge 46.4 12 0.0004 39.2 3.4 34 324-369 5-38 (466)
365 1kol_A Formaldehyde dehydrogen 46.2 25 0.00084 36.0 5.7 48 304-366 171-218 (398)
366 3i6i_A Putative leucoanthocyan 46.1 5.4 0.00018 39.6 0.7 99 324-441 11-117 (346)
367 1lvl_A Dihydrolipoamide dehydr 46.0 11 0.00038 39.4 3.2 32 324-367 6-37 (458)
368 3gwf_A Cyclohexanone monooxyge 46.0 9.4 0.00032 41.4 2.7 34 324-368 9-42 (540)
369 1e6u_A GDP-fucose synthetase; 46.0 18 0.00063 34.9 4.5 87 323-444 3-107 (321)
370 3m2p_A UDP-N-acetylglucosamine 45.7 47 0.0016 32.1 7.4 94 324-444 3-109 (311)
371 2pzm_A Putative nucleotide sug 45.6 22 0.00077 34.8 5.2 107 318-444 15-136 (330)
372 1gdh_A D-glycerate dehydrogena 45.6 18 0.0006 36.8 4.5 123 289-445 91-239 (320)
373 2ew2_A 2-dehydropantoate 2-red 45.5 12 0.00041 36.2 3.2 108 324-448 4-112 (316)
374 3lup_A DEGV family protein; PS 45.5 3.9 0.00013 41.2 -0.4 136 172-359 4-149 (285)
375 4a5l_A Thioredoxin reductase; 45.4 9.6 0.00033 36.6 2.4 31 325-367 6-36 (314)
376 3u7q_A Nitrogenase molybdenum- 45.4 5.9 0.0002 42.9 1.0 139 149-352 227-372 (492)
377 3uko_A Alcohol dehydrogenase c 45.1 24 0.0008 35.9 5.4 32 324-366 195-226 (378)
378 3o0h_A Glutathione reductase; 45.0 13 0.00044 39.1 3.5 32 324-367 27-58 (484)
379 1ojt_A Surface protein; redox- 44.9 13 0.00044 39.1 3.4 33 324-368 7-39 (482)
380 2ph5_A Homospermidine synthase 44.9 26 0.00087 38.3 5.8 97 324-445 14-115 (480)
381 1o94_A Tmadh, trimethylamine d 44.6 12 0.00043 41.9 3.5 33 324-368 390-422 (729)
382 3ihg_A RDME; flavoenzyme, anth 44.5 11 0.00038 40.0 2.9 33 324-368 6-38 (535)
383 1cjc_A Protein (adrenodoxin re 44.1 14 0.00048 39.1 3.6 34 324-367 7-40 (460)
384 1z82_A Glycerol-3-phosphate de 44.1 14 0.00046 37.1 3.3 99 324-449 15-116 (335)
385 3slg_A PBGP3 protein; structur 44.0 51 0.0017 32.6 7.5 100 322-444 23-141 (372)
386 4fk1_A Putative thioredoxin re 44.0 13 0.00045 36.1 3.1 32 324-367 7-38 (304)
387 2qa2_A CABE, polyketide oxygen 43.9 14 0.00047 39.4 3.5 32 324-367 13-44 (499)
388 1rsg_A FMS1 protein; FAD bindi 43.8 12 0.00039 39.7 2.9 22 324-345 9-30 (516)
389 1lld_A L-lactate dehydrogenase 43.6 21 0.00073 35.2 4.6 107 324-449 8-129 (319)
390 2e1m_A L-glutamate oxidase; L- 43.4 14 0.00046 38.7 3.3 32 324-367 45-76 (376)
391 3l4b_C TRKA K+ channel protien 43.2 12 0.00043 34.8 2.7 31 325-367 2-32 (218)
392 2q1w_A Putative nucleotide sug 43.2 42 0.0014 32.9 6.7 104 321-444 19-137 (333)
393 1rp0_A ARA6, thiazole biosynth 43.0 12 0.00041 36.5 2.7 35 324-369 40-74 (284)
394 3e1t_A Halogenase; flavoprotei 43.0 11 0.00039 39.9 2.7 33 324-368 8-40 (512)
395 3nyc_A D-arginine dehydrogenas 42.9 9 0.00031 37.7 1.8 33 323-368 9-41 (381)
396 3qvo_A NMRA family protein; st 42.7 30 0.001 32.3 5.3 99 324-444 24-125 (236)
397 2gqf_A Hypothetical protein HI 42.7 10 0.00035 39.3 2.2 34 324-369 5-38 (401)
398 2zb4_A Prostaglandin reductase 42.6 27 0.00092 35.0 5.3 57 298-367 137-195 (357)
399 3e48_A Putative nucleoside-dip 42.5 28 0.00094 33.2 5.1 98 325-444 2-106 (289)
400 3dk9_A Grase, GR, glutathione 42.3 13 0.00046 38.8 3.1 32 324-367 21-52 (478)
401 3lad_A Dihydrolipoamide dehydr 42.2 16 0.00055 38.1 3.7 32 324-367 4-35 (476)
402 1kyq_A Met8P, siroheme biosynt 42.0 10 0.00035 38.2 2.1 35 321-367 11-45 (274)
403 2qa1_A PGAE, polyketide oxygen 41.7 15 0.00051 39.2 3.4 32 324-367 12-43 (500)
404 3k6j_A Protein F01G10.3, confi 41.6 14 0.00049 39.8 3.2 36 485-520 232-267 (460)
405 1gte_A Dihydropyrimidine dehyd 41.4 13 0.00046 43.5 3.2 33 324-367 188-220 (1025)
406 1ps9_A 2,4-dienoyl-COA reducta 41.4 14 0.00047 40.9 3.1 33 324-368 374-406 (671)
407 2rgh_A Alpha-glycerophosphate 41.2 14 0.00049 40.2 3.2 34 324-369 33-66 (571)
408 1f8f_A Benzyl alcohol dehydrog 41.2 36 0.0012 34.4 6.0 32 324-366 192-223 (371)
409 2v3a_A Rubredoxin reductase; a 41.1 19 0.00066 36.4 3.9 34 324-367 5-38 (384)
410 2i0z_A NAD(FAD)-utilizing dehy 41.1 14 0.00047 38.5 3.0 34 324-369 27-60 (447)
411 4b7c_A Probable oxidoreductase 41.0 33 0.0011 34.0 5.6 51 301-366 131-182 (336)
412 1n2s_A DTDP-4-, DTDP-glucose o 40.9 23 0.00078 33.9 4.2 86 325-444 2-104 (299)
413 2pyx_A Tryptophan halogenase; 40.9 13 0.00046 39.5 2.9 38 324-368 8-52 (526)
414 4gde_A UDP-galactopyranose mut 40.9 25 0.00086 36.3 4.9 21 324-344 11-31 (513)
415 1s3e_A Amine oxidase [flavin-c 40.8 15 0.00053 38.6 3.3 32 324-367 5-36 (520)
416 3da1_A Glycerol-3-phosphate de 40.8 13 0.00045 40.4 2.8 32 324-367 19-50 (561)
417 2r0c_A REBC; flavin adenine di 40.7 15 0.00051 39.6 3.2 32 324-367 27-58 (549)
418 2fzw_A Alcohol dehydrogenase c 40.5 33 0.0011 34.5 5.6 32 324-366 192-223 (373)
419 1p0f_A NADP-dependent alcohol 40.4 34 0.0011 34.6 5.6 32 324-366 193-224 (373)
420 3aek_A Light-independent proto 40.4 12 0.00041 39.7 2.4 154 129-344 163-328 (437)
421 1piw_A Hypothetical zinc-type 40.3 40 0.0014 33.9 6.2 46 305-366 166-211 (360)
422 1qsg_A Enoyl-[acyl-carrier-pro 40.1 14 0.00049 35.2 2.7 35 323-367 9-44 (265)
423 2cf5_A Atccad5, CAD, cinnamyl 40.0 41 0.0014 33.9 6.2 46 306-366 167-212 (357)
424 3klj_A NAD(FAD)-dependent dehy 39.8 14 0.00049 37.9 2.8 35 324-370 10-44 (385)
425 1v0j_A UDP-galactopyranose mut 39.7 18 0.00063 37.1 3.6 33 324-367 8-40 (399)
426 2iid_A L-amino-acid oxidase; f 39.7 21 0.00071 37.2 4.0 22 324-345 34-55 (498)
427 3s2u_A UDP-N-acetylglucosamine 39.7 36 0.0012 34.4 5.7 41 400-445 84-124 (365)
428 2wpf_A Trypanothione reductase 39.7 19 0.00065 38.2 3.8 31 324-365 8-38 (495)
429 3grf_A Ornithine carbamoyltran 39.6 54 0.0018 33.9 7.0 134 259-414 96-240 (328)
430 2obn_A Hypothetical protein; s 39.6 2E+02 0.0069 29.9 11.4 128 324-477 8-141 (349)
431 2vns_A Metalloreductase steap3 39.5 17 0.00059 34.2 3.1 91 324-448 29-119 (215)
432 2b9w_A Putative aminooxidase; 39.4 17 0.00057 36.9 3.2 33 324-367 7-39 (424)
433 4h08_A Putative hydrolase; GDS 39.4 35 0.0012 30.6 5.1 46 207-269 70-115 (200)
434 1xhc_A NADH oxidase /nitrite r 39.3 17 0.00057 37.0 3.2 34 324-370 9-42 (367)
435 1fec_A Trypanothione reductase 39.2 21 0.00072 37.7 4.1 31 324-365 4-34 (490)
436 3ps9_A TRNA 5-methylaminomethy 39.2 17 0.00057 40.2 3.4 33 324-368 273-305 (676)
437 2yy7_A L-threonine dehydrogena 39.0 26 0.00087 33.6 4.3 98 324-442 3-116 (312)
438 3r1i_A Short-chain type dehydr 39.0 61 0.0021 31.4 7.1 81 321-418 30-119 (276)
439 3g17_A Similar to 2-dehydropan 38.9 17 0.00058 35.8 3.1 99 324-452 3-104 (294)
440 4dna_A Probable glutathione re 38.9 16 0.00054 38.1 3.0 32 324-367 6-37 (463)
441 2yg5_A Putrescine oxidase; oxi 38.8 19 0.00064 36.9 3.5 32 324-367 6-37 (453)
442 2vvm_A Monoamine oxidase N; FA 38.8 18 0.00063 37.6 3.5 21 324-344 40-60 (495)
443 3dhn_A NAD-dependent epimerase 38.7 34 0.0012 31.2 4.9 95 324-442 5-110 (227)
444 1zcj_A Peroxisomal bifunctiona 38.6 15 0.0005 39.2 2.7 32 324-367 38-69 (463)
445 4dgk_A Phytoene dehydrogenase; 38.5 15 0.0005 38.2 2.7 22 324-345 2-23 (501)
446 3atr_A Conserved archaeal prot 38.4 9 0.00031 39.8 1.0 33 324-368 7-39 (453)
447 2h6e_A ADH-4, D-arabinose 1-de 38.2 43 0.0015 33.4 5.9 31 307-341 155-189 (344)
448 2ivd_A PPO, PPOX, protoporphyr 38.1 14 0.00049 38.1 2.5 21 324-344 17-37 (478)
449 3pvc_A TRNA 5-methylaminomethy 38.1 15 0.0005 40.8 2.7 33 324-368 265-297 (689)
450 4b8w_A GDP-L-fucose synthase; 37.8 53 0.0018 31.0 6.3 46 398-444 51-113 (319)
451 3enk_A UDP-glucose 4-epimerase 37.7 32 0.0011 33.5 4.8 102 324-444 6-129 (341)
452 2b5w_A Glucose dehydrogenase; 37.7 24 0.00082 35.5 4.0 34 324-367 174-208 (357)
453 2j3h_A NADP-dependent oxidored 37.5 32 0.0011 34.2 4.8 50 302-366 138-188 (345)
454 3vtz_A Glucose 1-dehydrogenase 37.5 1.1E+02 0.0038 29.3 8.6 75 321-418 12-91 (269)
455 2gmh_A Electron transfer flavo 37.4 34 0.0012 37.3 5.4 36 324-367 36-73 (584)
456 3ec7_A Putative dehydrogenase; 37.3 15 0.00053 37.2 2.5 98 319-441 19-116 (357)
457 1yqg_A Pyrroline-5-carboxylate 37.2 22 0.00074 33.8 3.4 32 325-367 2-33 (263)
458 3o38_A Short chain dehydrogena 37.2 20 0.00068 34.1 3.1 35 321-367 20-56 (266)
459 4gbj_A 6-phosphogluconate dehy 37.1 11 0.00039 37.6 1.5 31 324-366 6-36 (297)
460 3two_A Mannitol dehydrogenase; 37.1 40 0.0014 33.7 5.5 45 306-366 164-208 (348)
461 1qor_A Quinone oxidoreductase; 37.1 42 0.0014 33.1 5.6 50 302-366 123-173 (327)
462 1h2b_A Alcohol dehydrogenase; 37.1 41 0.0014 33.9 5.7 45 306-366 172-219 (359)
463 5mdh_A Malate dehydrogenase; o 37.1 7.9 0.00027 39.8 0.3 120 324-461 4-143 (333)
464 3eag_A UDP-N-acetylmuramate:L- 37.0 19 0.00066 36.2 3.2 32 324-367 5-37 (326)
465 3hdq_A UDP-galactopyranose mut 36.7 22 0.00076 37.3 3.7 32 324-367 30-61 (397)
466 3oec_A Carveol dehydrogenase ( 36.7 49 0.0017 32.7 6.1 39 318-367 41-79 (317)
467 1zej_A HBD-9, 3-hydroxyacyl-CO 36.7 19 0.00066 36.3 3.1 30 324-366 13-42 (293)
468 3uve_A Carveol dehydrogenase ( 36.7 57 0.002 31.4 6.4 37 317-367 8-44 (286)
469 1pjq_A CYSG, siroheme synthase 36.6 21 0.00073 38.0 3.6 25 321-345 10-34 (457)
470 1e3i_A Alcohol dehydrogenase, 36.5 35 0.0012 34.5 5.1 32 324-366 197-228 (376)
471 1v3u_A Leukotriene B4 12- hydr 36.2 37 0.0013 33.6 5.1 53 299-366 125-178 (333)
472 4fs3_A Enoyl-[acyl-carrier-pro 36.1 24 0.00083 33.9 3.6 37 321-367 4-41 (256)
473 2x8g_A Thioredoxin glutathione 36.1 20 0.00069 38.7 3.3 31 324-366 108-138 (598)
474 2x5o_A UDP-N-acetylmuramoylala 36.1 14 0.00048 38.8 2.1 35 322-368 4-38 (439)
475 3dqp_A Oxidoreductase YLBE; al 36.0 36 0.0012 31.1 4.7 93 325-442 2-104 (219)
476 1y56_A Hypothetical protein PH 36.0 9.9 0.00034 40.4 0.9 32 324-368 109-140 (493)
477 2jhf_A Alcohol dehydrogenase E 35.9 37 0.0013 34.3 5.1 32 324-366 193-224 (374)
478 2gjc_A Thiazole biosynthetic e 35.8 23 0.0008 36.3 3.6 37 324-370 66-102 (326)
479 1dlj_A UDP-glucose dehydrogena 35.8 39 0.0013 35.1 5.4 30 325-367 2-31 (402)
480 1rjw_A ADH-HT, alcohol dehydro 35.6 40 0.0014 33.6 5.3 45 306-366 152-196 (339)
481 3ic9_A Dihydrolipoamide dehydr 35.5 17 0.00059 38.4 2.6 32 324-367 9-40 (492)
482 3mog_A Probable 3-hydroxybutyr 35.4 19 0.00064 38.9 2.9 32 324-367 6-37 (483)
483 3cmm_A Ubiquitin-activating en 35.2 22 0.00077 42.1 3.7 39 323-367 425-463 (1015)
484 1tt7_A YHFP; alcohol dehydroge 35.0 61 0.0021 31.9 6.4 31 324-366 152-183 (330)
485 2bcg_G Secretory pathway GDP d 35.0 20 0.00069 37.4 3.0 35 324-370 12-46 (453)
486 3s2e_A Zinc-containing alcohol 35.0 37 0.0013 33.8 4.9 45 306-366 154-198 (340)
487 2zcu_A Uncharacterized oxidore 34.6 21 0.00071 33.8 2.8 96 325-444 1-104 (286)
488 2q3e_A UDP-glucose 6-dehydroge 34.6 1.1E+02 0.0036 32.5 8.6 34 324-367 6-39 (467)
489 1oi7_A Succinyl-COA synthetase 34.5 36 0.0012 34.1 4.7 88 324-442 8-96 (288)
490 1cdo_A Alcohol dehydrogenase; 34.5 40 0.0014 34.0 5.1 32 324-366 194-225 (374)
491 3goh_A Alcohol dehydrogenase, 34.5 49 0.0017 32.5 5.6 38 302-343 126-163 (315)
492 3pgx_A Carveol dehydrogenase; 34.5 59 0.002 31.2 6.1 36 321-367 13-48 (280)
493 1pj5_A N,N-dimethylglycine oxi 34.4 21 0.00071 40.5 3.2 35 324-369 5-39 (830)
494 1i8t_A UDP-galactopyranose mut 34.3 18 0.00061 36.8 2.5 32 324-367 2-33 (367)
495 1uuf_A YAHK, zinc-type alcohol 34.3 48 0.0016 33.7 5.6 46 305-366 181-226 (369)
496 1vj0_A Alcohol dehydrogenase, 34.2 30 0.001 35.3 4.1 50 302-366 178-228 (380)
497 1qo8_A Flavocytochrome C3 fuma 34.1 27 0.00093 37.6 4.0 35 324-370 122-156 (566)
498 3ojo_A CAP5O; rossmann fold, c 34.0 69 0.0024 34.1 7.0 62 405-471 117-184 (431)
499 1iz0_A Quinone oxidoreductase; 33.9 57 0.002 31.8 6.0 48 303-366 110-158 (302)
500 4eye_A Probable oxidoreductase 33.8 31 0.001 34.6 4.1 49 303-366 143-192 (342)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=4.2e-199 Score=1600.65 Aligned_cols=527 Identities=42% Similarity=0.790 Sum_probs=513.1
Q ss_pred cccccccCCCCccCCCCChHhhhccCCCCCCCCcccCHHHHHHHHHHHHhccccccCCCCCccCchhHHHHHHHhhhccc
Q 007939 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (584)
Q Consensus 31 ~G~~~l~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~tle~Q~~r~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~rNe 110 (584)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++ ++|+||+||++||+|||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred eeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeeccCCCC
Q 007939 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (584)
Q Consensus 111 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (584)
+||||++.+|++|+|||+||||||++|++||++||+|||||||++|+|+++++++|||.++|+|||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHC-CCeeeE
Q 007939 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIVQ 269 (584)
Q Consensus 191 ~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~lIq 269 (584)
++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++||
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred eccCCCChHHHHHHHHhhccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHH
Q 007939 270 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (584)
Q Consensus 270 fEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (584)
||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007939 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (584)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~ 429 (584)
+|+|+|||++||||||++|||+++|++|+++|++||+++++ ..+|+|||+.+|||||||+|+++|+|||||||+
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 79999999999999999999999998999999999998643 368999999999999999999999999999999
Q ss_pred hhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhhHHHHHHhCCcc
Q 007939 430 MRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARF 509 (584)
Q Consensus 430 M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~ 509 (584)
|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|||||||||+++++|++
T Consensus 382 Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~ 460 (555)
T 1gq2_A 382 MAA-FNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKH 460 (555)
T ss_dssp HHH-HCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSS
T ss_pred HHh-cCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeE
Confidence 975 9999999999999999999999999999999999999999999996699999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcCccCCCCCCChhHhhhhhc
Q 007939 510 ITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSK 580 (584)
Q Consensus 510 Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g~A~~~~~~~~~~~~~~~~ 580 (584)
|||+|+++||++||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+.++ .++++..+.+
T Consensus 461 Itd~M~~aAA~alA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~--~~~d~~~~i~ 529 (555)
T 1gq2_A 461 IGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYP--QPEDLEAFIR 529 (555)
T ss_dssp CCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSS--CCSSHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCC--ChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998754 3566655543
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=3.3e-198 Score=1597.78 Aligned_cols=531 Identities=41% Similarity=0.765 Sum_probs=514.8
Q ss_pred cccccccccCCCCccCCCCChHhhhccCCCCCCCCcccCHHHHHHHHHHHHhccccccCCCCCccCchhHHHHHHHhhhc
Q 007939 29 HKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDR 108 (584)
Q Consensus 29 ~~~G~~~l~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~tle~Q~~r~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~r 108 (584)
..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++ ++|+||+||++||+|
T Consensus 2 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~ 71 (564)
T 1pj3_A 2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQER 71 (564)
T ss_dssp CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTT
T ss_pred CCchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhcc
Confidence 3589999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred cceeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeeccCC
Q 007939 109 NETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGD 188 (584)
Q Consensus 109 Ne~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGD 188 (584)
||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+|+|+++++|||.++|+|||||||||||||||
T Consensus 72 Ne~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD 151 (564)
T 1pj3_A 72 NEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGD 151 (564)
T ss_dssp CHHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCC
T ss_pred cceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHC-CCee
Q 007939 189 LGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAI 267 (584)
Q Consensus 189 lG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~l 267 (584)
||++||+|||||++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+++| |+++
T Consensus 152 ~G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~ 231 (564)
T 1pj3_A 152 LGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTL 231 (564)
T ss_dssp CGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred eEeccCCCChHHHHHHHHhhccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHH
Q 007939 268 VQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 268 IqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (584)
||||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 232 I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~ 308 (564)
T 1pj3_A 232 IQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV 308 (564)
T ss_dssp EEECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH
T ss_pred EeehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHH
Q 007939 348 RMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEV 426 (584)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteev 426 (584)
++|+|+|||++||||||++|||+++| ++|+++|++||++++++ ...+|+|||+.+|||||||+|+++|+|||||
T Consensus 309 -~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~ev 383 (564)
T 1pj3_A 309 -ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDV 383 (564)
T ss_dssp -HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHH
T ss_pred -HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHH
Confidence 78999999999999999999999999 78999999999987642 1368999999999999999999999999999
Q ss_pred HHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhhHHHHHHhC
Q 007939 427 LKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSG 506 (584)
Q Consensus 427 v~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~ 506 (584)
||+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+|+||||||+|+|||||||+++++
T Consensus 384 v~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~ 462 (564)
T 1pj3_A 384 IRAMAS-INERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCN 462 (564)
T ss_dssp HHHHHH-HCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTT
T ss_pred HHHHHh-cCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcC
Confidence 999975 9999999999999999999999999999999999999999999996699999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcCccCCCCCCChhHhhhhhc
Q 007939 507 ARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSK 580 (584)
Q Consensus 507 a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g~A~~~~~~~~~~~~~~~~ 580 (584)
|++|||+|+++||++||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+.++ .++++..+.+
T Consensus 463 A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~--~~~d~~~~i~ 534 (564)
T 1pj3_A 463 TRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYP--EPEDKAKYVK 534 (564)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSS--CCSSHHHHHH
T ss_pred CeECCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCC--ChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998754 3555555443
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=4.7e-198 Score=1600.57 Aligned_cols=531 Identities=43% Similarity=0.778 Sum_probs=515.4
Q ss_pred CceeecccccccccCCCCccCCCCChHhhhccCCCCCCCCcccCHHHHHHHHHHHHhccccccCCCCCccCchhHHHHHH
Q 007939 24 GPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILN 103 (584)
Q Consensus 24 ~~~~~~~~G~~~l~~p~~NKGtaFt~~ER~~l~l~GLLPp~v~tle~Q~~r~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~ 103 (584)
.++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||+
T Consensus 31 ~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~ 100 (605)
T 1o0s_A 31 ERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQLD 100 (605)
T ss_dssp CCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHHHH
T ss_pred CccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHHHH
Confidence 344566789999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred HhhhccceeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCCh--hhHHHHHhcCCCCCceEEEEecCc
Q 007939 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTDGS 181 (584)
Q Consensus 104 ~L~~rNe~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~--g~i~~~l~nwp~~~v~viVVTDG~ 181 (584)
+||+|||+||||++.+|++|+|||+||||||++|++||++||+|||+|||++|+ |+++++++|||.++|+||||||||
T Consensus 101 ~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~ 180 (605)
T 1o0s_A 101 GLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGE 180 (605)
T ss_dssp HHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSS
T ss_pred HhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred eeeccCCCCCCcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHH
Q 007939 182 RILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA 261 (584)
Q Consensus 182 rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~ 261 (584)
|||||||||++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.
T Consensus 181 ~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~ 260 (605)
T 1o0s_A 181 RILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTK 260 (605)
T ss_dssp CBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HC-CCeeeEeccCCCChHHHHHHHHhhccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHH
Q 007939 262 RW-PKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLK 340 (584)
Q Consensus 262 ~~-P~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ 340 (584)
+| |+++||||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+
T Consensus 261 ~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ 337 (605)
T 1o0s_A 261 KYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGIAE 337 (605)
T ss_dssp HHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHH
T ss_pred HhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHH
Confidence 99 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCC
Q 007939 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (584)
Q Consensus 341 li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g 420 (584)
||+++|+ ++|+|+|||++||||||++|||+++|++|+++|++||+++++ ..+|+|||+.+|||||||+|+++|
T Consensus 338 ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~~g 410 (605)
T 1o0s_A 338 MIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTVRG 410 (605)
T ss_dssp HHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSCTT
T ss_pred HHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCC
Confidence 9999999 789999999999999999999999998999999999998643 368999999999999999999999
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhhHH
Q 007939 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (584)
Q Consensus 421 ~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (584)
+|||||||+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|+ ||+++||||||+||||||||
T Consensus 411 ~ft~evv~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~-Grs~~pnQ~NN~liFPGi~l 488 (605)
T 1o0s_A 411 AFNEEVIRAMAE-INERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELN-GHTYKPGQGNNAYIFPGVAL 488 (605)
T ss_dssp CSCHHHHHHHHH-HCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEET-TEEECCEECCGGGTHHHHHH
T ss_pred CCCHHHHHHHHh-cCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeEC-CEEeccccccceeeccchhh
Confidence 999999999975 9999999999999999999999999999999999999999999994 99999999999999999999
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcCccCCCCCCChhHhhhh
Q 007939 501 GTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHM 578 (584)
Q Consensus 501 G~~~~~a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g~A~~~~~~~~~~~~~~ 578 (584)
|+++++|++|||+|+++||++||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+.++ .++++..+
T Consensus 489 Gal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~--~~~d~~~~ 564 (605)
T 1o0s_A 489 GTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYP--QPEDLEKY 564 (605)
T ss_dssp HHHHHTBSCCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSS--CCSCHHHH
T ss_pred hhhhcCCeEcCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCC--ChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998754 35555544
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=7.3e-121 Score=973.74 Aligned_cols=391 Identities=25% Similarity=0.363 Sum_probs=360.1
Q ss_pred hhccceeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeec
Q 007939 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (584)
Q Consensus 106 ~~rNe~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (584)
..+-+.. -++.+++.++ |||+||||||++|++|+ +|++++++++.+| ++||||||||||||
T Consensus 44 ~GKi~v~-~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILG 104 (487)
T 3nv9_A 44 KGKIQIM-PKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLG 104 (487)
T ss_dssp TSSEEEE-ECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGG
T ss_pred CCeEEEE-ecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeee
Confidence 5666654 7888999998 69999999999999998 6899999888877 58999999999999
Q ss_pred cCCCCC-CcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCC
Q 007939 186 LGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (584)
Q Consensus 186 LGDlG~-~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (584)
|||||+ +||||||||++|||+||||| |||||||+||+| +++| +||||++|+.+||
T Consensus 105 LGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~defve~v~~~~P 160 (487)
T 3nv9_A 105 DGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PDAVIEFVQRIQH 160 (487)
T ss_dssp GBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HHHHHHHHHHHGG
T ss_pred ccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HHHHHHHHHHhCC
Confidence 999999 79999999999999999999 999999999866 4677 5999999999999
Q ss_pred Ce-eeEeccCCCChHHHHHHHHhh--ccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHH
Q 007939 265 KA-IVQFEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (584)
Q Consensus 265 ~~-lIqfEDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (584)
++ .||||||+++|||+||+|||+ ++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+|
T Consensus 161 ~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 161 TFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEECCSHHHHHHHHH
T ss_pred CCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHH
Confidence 98 999999999999999999999 589999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCC-----hhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec
Q 007939 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-----PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 416 (584)
Q Consensus 342 i~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~-----~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S 416 (584)
|+. .|+|+ +|||||||+|||+++|++|+ ++|.+||+.+++ ....+|+|||+. +|||||+|
T Consensus 238 l~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~~--adVlIG~S 302 (487)
T 3nv9_A 238 IVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACVG--ADVLISLS 302 (487)
T ss_dssp HHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHTT--CSEEEECC
T ss_pred HHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHhc--CCEEEEec
Confidence 975 59986 89999999999999997774 466788887642 145799999999 79999999
Q ss_pred CC-CCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccc
Q 007939 417 GV-GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLF 495 (584)
Q Consensus 417 ~~-~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iF 495 (584)
++ ||+||+|||++|+ +|||||||||||+ ||+||||++ +|+|||||| |+++||||||+|+|
T Consensus 303 ~~~pg~ft~e~V~~Ma----~~PIIFaLSNPtp--Ei~pe~A~~--~G~aIvATG-----------rsd~PnQ~NN~liF 363 (487)
T 3nv9_A 303 TPGPGVVKAEWIKSMG----EKPIVFCCANPVP--EIYPYEAKE--AGAYIVATG-----------RGDFPNQVNNSVGF 363 (487)
T ss_dssp CSSCCCCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHH--TTCSEEEES-----------CTTSSSBCCGGGTH
T ss_pred ccCCCCCCHHHHHhhc----CCCEEEECCCCCc--cCCHHHHHH--hCCEEEEEC-----------CCCCcccCcceeEc
Confidence 76 7999999999994 7999999999998 999999998 699999996 66789999999999
Q ss_pred hhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcCccCCCCCCChhHh
Q 007939 496 PGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDL 575 (584)
Q Consensus 496 PGiglG~~~~~a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g~A~~~~~~~~~~~ 575 (584)
||||+|++++||++|||+|+++||++||++++++++..+.|||++++ ++||.+||.||+++|+++|+|+.+ ..+++++
T Consensus 364 PGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~-~~~~~~~ 441 (487)
T 3nv9_A 364 PGILKGALIVRARKITDNMAIAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVT-DLTWQQV 441 (487)
T ss_dssp HHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCC-CCCHHHH
T ss_pred chhhHHHHHcCCcccCHHHHHHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCC-CCCHHHH
Confidence 99999999999999999999999999999999999999999999999 479999999999999999999974 3578877
Q ss_pred hhh
Q 007939 576 KHM 578 (584)
Q Consensus 576 ~~~ 578 (584)
+..
T Consensus 442 ~~~ 444 (487)
T 3nv9_A 442 YDI 444 (487)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=3.4e-113 Score=905.00 Aligned_cols=368 Identities=30% Similarity=0.458 Sum_probs=340.6
Q ss_pred hhccceeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeec
Q 007939 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (584)
Q Consensus 106 ~~rNe~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (584)
..+-+ +++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||||
T Consensus 19 ~gk~~-~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKLE-VQPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSEE-EEESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeEE-EEEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 45544 479999999876 79999999999999998 4777766 57778899999999999999
Q ss_pred cCCCCCC-cccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCC
Q 007939 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (584)
Q Consensus 186 LGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (584)
|||+|++ |||||+||+.||++||||| |+|||||+|| +||||++|+++||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 8999999999999
Q ss_pred C-eeeEeccCCCChHHHHHHHHhhc--cCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHH
Q 007939 265 K-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (584)
Q Consensus 265 ~-~lIqfEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (584)
. .+||||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 9 59999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCC
Q 007939 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (584)
Q Consensus 342 i~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g 420 (584)
++.+ |. ++||++|++|||+++| ++|+++|++||++.+.. ....+|+|+|+. +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9985 54 7999999999999999 88999999999986542 235789999999 899999998 99
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhhHH
Q 007939 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (584)
Q Consensus 421 ~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (584)
+||+|+|++|+ ++||||||||||+ ||+||||++| |+|||||| |+++|||+||+|+|||||+
T Consensus 270 l~T~EmVk~Ma----~~pIIfalsNPt~--E~~pe~a~~~--g~~i~atG-----------rs~~p~Q~NN~~~FPgi~~ 330 (398)
T 2a9f_A 270 VLKAEWISKMA----ARPVIFAMANPIP--EIYPDEALEA--GAYIVGTG-----------RSDFPNQINNVLAFPGIFR 330 (398)
T ss_dssp CCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHTT--TCSEEEES-----------CTTSSSBCCGGGTHHHHHH
T ss_pred CCCHHHHHhhC----CCCEEEECCCCCc--cCCHHHHHHh--CCeEEEeC-----------CCCCCCcCCceeEcchHHH
Confidence 99999999995 7999999999997 9999999999 99999995 8899999999999999999
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcC
Q 007939 501 GTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEED 562 (584)
Q Consensus 501 G~~~~~a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g 562 (584)
|++++||++|||+|+++||++||++++++++..++|||++++ ++||.+||.||+++|+++.
T Consensus 331 Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 331 GALDARAKTITVEMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHcCCcCCCHHHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999 8999999999999998653
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=2.6e-107 Score=858.85 Aligned_cols=360 Identities=26% Similarity=0.401 Sum_probs=335.6
Q ss_pred hhccceeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeec
Q 007939 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (584)
Q Consensus 106 ~~rNe~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (584)
..+- .+++++.+++.++ |||+||||||++|++|+ .|+++++ +|+.++++|+|||||+||||
T Consensus 23 ~gk~-~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~vLG 83 (388)
T 1vl6_A 23 KGKI-RTALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAVLG 83 (388)
T ss_dssp TCSC-EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTBTT
T ss_pred CCeE-EEEEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccccC
Confidence 4443 4579999999988 69999999999999998 3677665 57778899999999999999
Q ss_pred cCCCCCC-cccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCC
Q 007939 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (584)
Q Consensus 186 LGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (584)
|||+|++ |||||+||+.||++||||| |+|||||+|| +||||++|+++||
T Consensus 84 lGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~p 133 (388)
T 1vl6_A 84 LGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLEP 133 (388)
T ss_dssp TBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTGG
T ss_pred CCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 8999999999999
Q ss_pred C-eeeEeccCCCChHHHHHHHHhhc--cCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHH
Q 007939 265 K-AIVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (584)
Q Consensus 265 ~-~lIqfEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (584)
. ..||||||+++|||++|+|||++ +|||||||||||+|++||+++|+|++|++++| +||||+|||+||+++|++
T Consensus 134 ~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iAkl 210 (388)
T 1vl6_A 134 SFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIVKF 210 (388)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHHHH
T ss_pred cceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHHHH
Confidence 9 49999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCcEEEEecCcccccCCCC--CChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC
Q 007939 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (584)
Q Consensus 342 i~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~--l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~ 419 (584)
++.. |. ++||++|++|||+.+|.+ |+++|++||++.+.+ ....+|.|+|+. +|+|||+|+ |
T Consensus 211 l~~~-----G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa-p 273 (388)
T 1vl6_A 211 LLDL-----GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR-G 273 (388)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC-S
T ss_pred HHhC-----CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC-C
Confidence 9875 42 799999999999999976 999999999986532 235789999999 899999999 8
Q ss_pred CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhhH
Q 007939 420 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIG 499 (584)
Q Consensus 420 g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGig 499 (584)
|+||+|+|+.|+ ++||||+|||||+ ||+||||++| |+|||||| |+++|||+||+|+|||||
T Consensus 274 ~l~t~emVk~Ma----~~pIIfalSNPt~--E~~p~~a~~~--g~~i~atG-----------r~~~p~Q~NN~~~FPgi~ 334 (388)
T 1vl6_A 274 NILKPEWIKKMS----RKPVIFALANPVP--EIDPELAREA--GAFIVATG-----------RSDHPNQVNNLLAFPGIM 334 (388)
T ss_dssp SCSCHHHHTTSC----SSCEEEECCSSSC--SSCHHHHHHT--TCSEEEES-----------CTTSSSBCCGGGTHHHHH
T ss_pred CccCHHHHHhcC----CCCEEEEcCCCCC--CCCHHHHHHh--cCeEEEeC-----------CCCCCCcCCceeEcchHh
Confidence 999999999995 6999999999996 9999999999 99999995 889999999999999999
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHH
Q 007939 500 LGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAA 558 (584)
Q Consensus 500 lG~~~~~a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A 558 (584)
+|++++||+ |||+|+++||++||+++ ++.+++|||++++ ++||.+||.||+++|
T Consensus 335 ~Gal~~~a~-i~~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 335 KGAVEKRSK-ITKNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHCSC-CCHHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHhcCCc-cCHHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999 99999999999999999 6778999999999 899999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1e-83 Score=690.14 Aligned_cols=378 Identities=28% Similarity=0.451 Sum_probs=343.5
Q ss_pred eeEeeeeccCcccccceecccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCceeeccCCCC
Q 007939 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (584)
Q Consensus 111 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (584)
..++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++++++|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 3579999999977 69999999999999999 58998876 777889999999999999999999
Q ss_pred CC-cccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCe-ee
Q 007939 191 VQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IV 268 (584)
Q Consensus 191 ~~-Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-lI 268 (584)
.+ ++|+++||+.||++||||| ++|++||+ +| +|||+++|+.++|++ .|
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~f~Gi 132 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGGCSEE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCccCcEE
Confidence 95 9999999999999999999 99999999 23 799999999999995 99
Q ss_pred EeccCCCChHHHHHHHHhhc--cCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHH
Q 007939 269 QFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (584)
Q Consensus 269 qfEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~ 346 (584)
|||||+.||||++|++|++. +||||||+||||.+.++|+++|++.+|+++++ +|+||+|||+||.+|+.+|.+
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L~~-- 207 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRILTE-- 207 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHHHH--
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHHHH--
Confidence 99999999999999999985 89999999999999999999999999999999 999999999999999999976
Q ss_pred HHHcCCChhhhcCcEEEEe----cCcccccCCCC---CChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC
Q 007939 347 ARMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (584)
Q Consensus 347 ~~~~Gls~eeA~~~i~lvD----s~GLi~~~r~~---l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~ 419 (584)
.|+++ ++||++| ++||++++ ++ |.++|.+|++..+.. ....+|.|+++. +|+|||+|+.+
T Consensus 208 ---~G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlInaT~~~ 274 (439)
T 2dvm_A 208 ---AGVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISFTRPG 274 (439)
T ss_dssp ---TTCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEECSCCC
T ss_pred ---cCCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEcCCCc
Confidence 37753 6899999 99999987 45 788888888754321 124679999987 89999999975
Q ss_pred -CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccchhh
Q 007939 420 -GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGI 498 (584)
Q Consensus 420 -g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGi 498 (584)
|.|++++++.|+ ++||||+||||++ ||++++|.+| |++++||| +++.|+|+||+|+||||
T Consensus 275 ~G~~~~e~v~~m~----~~~iVfDLynP~~--t~~~~~A~~~--G~~ivatG-----------~~ml~~Q~nn~~~FPGi 335 (439)
T 2dvm_A 275 PGVIKPQWIEKMN----EDAIVFPLANPVP--EILPEEAKKA--GARIVATG-----------RSDYPNQINNLLGFPGI 335 (439)
T ss_dssp SSSSCHHHHTTSC----TTCEEEECCSSSC--SSCHHHHHHH--TCSEECBS-----------CSSSSSBCCGGGTHHHH
T ss_pred cCCCChHHHHhcC----CCCEEEECCCCCC--cchHHHHHHc--CCeEEcCC-----------CchhHHHHHHHhcccCc
Confidence 999999999984 7999999999997 9999999998 88999985 88999999999999999
Q ss_pred HHHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcccchHHHHHHHHHHHHHcCccCCCCCCChhHhhhh
Q 007939 499 GLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHM 578 (584)
Q Consensus 499 glG~~~~~a~~Itd~m~~aAA~alA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~g~A~~~~~~~~~~~~~~ 578 (584)
|+|+++++|++|||+|+++||++||++++++ ..+.|||++++ ++||.+||.||+++|+++|+|+.+ ..++++..+
T Consensus 336 ~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~--~~~~~~~~~ 410 (439)
T 2dvm_A 336 FRGALDVRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTK--VKGEWVEEH 410 (439)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSC--CCHHHHHHH
T ss_pred hHHHHhcCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCC--CChHHHHHH
Confidence 9999999999999999999999999999876 68999999999 899999999999999999999864 467776543
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.89 E-value=6.3e-09 Score=111.87 Aligned_cols=272 Identities=15% Similarity=0.204 Sum_probs=159.3
Q ss_pred HHHHHHHHHCCCeeeEeccCCCChH---HHHHHHHh---hccCcc----------ccCcchhHHHHHHHHHHHHHHhCCC
Q 007939 254 EFMEAVHARWPKAIVQFEDFQMKWA---FETLERYR---KRFCMF----------NDDIQGTAGVALAGLLGTVRAQGLS 317 (584)
Q Consensus 254 efv~av~~~~P~~lIqfEDf~~~nA---f~lL~ryr---~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~ 317 (584)
.++..+...||+.+=++--++-..- .|+-+..+ -.+|+| .|++.||+.+++.+++. .++..
T Consensus 132 dl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~ 208 (436)
T 3h9u_A 132 DLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVM 208 (436)
T ss_dssp HHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCC
T ss_pred HHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCc
Confidence 3456667778775322222222222 22222122 238999 89999999999999964 57888
Q ss_pred CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccC
Q 007939 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREG 397 (584)
Q Consensus 318 l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~ 397 (584)
+.. .+++|+|.|..|.++|+.+..+ |. +++++|++ +.+...|.... ...
T Consensus 209 L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga-------~Viv~D~~-----------p~~a~~A~~~G-----~~~ 257 (436)
T 3h9u_A 209 IAG---KTACVCGYGDVGKGCAAALRGF-----GA-------RVVVTEVD-----------PINALQAAMEG-----YQV 257 (436)
T ss_dssp CTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT-----CEE
T ss_pred ccC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCC-----------hhhhHHHHHhC-----Cee
Confidence 888 9999999999999999988764 43 68888873 22222222111 123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccc
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 477 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~ 477 (584)
.+|.|+++. .|++|.+++..+.++++.++.|. +..||+-.|++.. |+.++++.+.. .. +.-+...-+..+
T Consensus 258 ~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK----~gAIVINvgRg~v--EID~~~L~~~~-~~-~~~ir~~vd~y~ 327 (436)
T 3h9u_A 258 LLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR----DDAIVCNIGHFDT--EIQVAWLKANA-KE-RVEVKPQVDRYT 327 (436)
T ss_dssp CCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC----TTEEEEECSSSGG--GBCHHHHHHHC-SE-EEEEETTEEEEE
T ss_pred cCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC----CCcEEEEeCCCCC--ccCHHHHHhhc-Cc-eEeecCCceEEE
Confidence 579999987 99999888878999999999994 6899999999987 99998776531 11 222211111122
Q ss_pred cCCCeeee-ccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCC---CCCCCc---cccCCCCcccchHHH
Q 007939 478 LGNGKIGH-VNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDE---EIPKGI---LYPSIDSIRDITAEV 550 (584)
Q Consensus 478 ~~~G~~~~-p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v~~~---~~~~g~---l~P~~~~ir~vs~~V 550 (584)
++||+... .+++. =+=||+-......|-|--|..-+-+.-.+.+.. ++..+. +|+ +-.++
T Consensus 328 ~~dg~~I~LLaeGr------LvNl~~~~Ghp~~vm~~sf~~q~la~~~l~~~~~~~~~~~~~~~~v~~-------lp~~~ 394 (436)
T 3h9u_A 328 MANGRHIILLAEGR------LVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPRGAKAQVYF-------LPKKL 394 (436)
T ss_dssp CTTSCEEEEEGGGS------CHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTTSSCC---CCEEE-------CCHHH
T ss_pred cCCCCEEEEecCCC------eecccCCCCChHHHhhHHHHHHHHHHHHHHhCCCcccCCCCCCceeee-------CCHHH
Confidence 23343221 11111 123455333333444443443333333333221 343332 443 34455
Q ss_pred HHHHHHHHHH-cCccCCCCCCChh--HhhhhhccCCC
Q 007939 551 GAAVLRAAVE-EDLAEGHGEVGPR--DLKHMSKVGPY 584 (584)
Q Consensus 551 A~aVa~~A~~-~g~A~~~~~~~~~--~~~~~~~~~~~ 584 (584)
=..||+.-.+ -|+- +.+++++ +-+....+|||
T Consensus 395 d~~vA~~~l~~~g~~--~~~lt~~q~~y~~~~~~g~~ 429 (436)
T 3h9u_A 395 DEKVAALHLGKLGAK--LTKLTPKQAEYINCPVDGPF 429 (436)
T ss_dssp HHHHHHHHHHHHTCC--CCCCCHHHHHHTTSCTTCCC
T ss_pred HHHHHHHHHHHcCCc--cccCCHHHHHhcCCCcCCCC
Confidence 5667665553 3432 3355665 56677788887
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.77 E-value=2.8e-08 Score=106.78 Aligned_cols=127 Identities=22% Similarity=0.262 Sum_probs=101.5
Q ss_pred cCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhc
Q 007939 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (584)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~ 358 (584)
+|+| .|++.||+-++++|+..+ ++..+.. .+++|+|+|..|.++|+.+... |.
T Consensus 182 ~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga------ 244 (435)
T 3gvp_A 182 VPAMNVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS------ 244 (435)
T ss_dssp SCEEECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CCEEEecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC------
Confidence 8999 899999999999999764 7888888 9999999999999999988754 43
Q ss_pred CcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 007939 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (584)
Q Consensus 359 ~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erP 438 (584)
+++.+|++. .+...|... + ....+|.|+++. .|++|.+++..+.++++.++.|. +..
T Consensus 245 -~Viv~D~dp-----------~ra~~A~~~----G-~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK----~ga 301 (435)
T 3gvp_A 245 -IVYVTEIDP-----------ICALQACMD----G-FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK----NSC 301 (435)
T ss_dssp -EEEEECSCH-----------HHHHHHHHT----T-CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC----TTE
T ss_pred -EEEEEeCCh-----------hhhHHHHHc----C-CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC----CCc
Confidence 588888742 111222211 0 113579999987 99999998888999999999994 578
Q ss_pred eEEecCCCCCccCCCHHHH
Q 007939 439 AIFAMSNPTMNAECTAADA 457 (584)
Q Consensus 439 IIFaLSNPt~~aE~tpeda 457 (584)
||+-.+++.. |+..+..
T Consensus 302 ilINvgrg~~--EId~~~L 318 (435)
T 3gvp_A 302 IVCNMGHSNT--EIDVASL 318 (435)
T ss_dssp EEEECSSTTT--TBTGGGG
T ss_pred EEEEecCCCc--cCCHHHH
Confidence 9999999977 8887665
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.31 E-value=1.3e-06 Score=92.38 Aligned_cols=227 Identities=16% Similarity=0.257 Sum_probs=133.6
Q ss_pred CChhhHHHHHhcCCCCCceEEEEecCceeeccCCCCC--CcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccC
Q 007939 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (584)
Q Consensus 155 ~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~D 232 (584)
-++..++++.+. ..+|+|.|+++..+|++|.+. .|..|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 466777777774 468999999999999999997 49999988 66775 1 5677552 2
Q ss_pred cccccccccCCChhhhhHhHHHHHHHHHHHCCCe-eeEeccCCCChHHHHHHHHhhc-cCccc-cCc------c----hh
Q 007939 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GT 299 (584)
Q Consensus 233 P~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-lIqfEDf~~~nAf~lL~ryr~~-~~~FN-DDi------Q----GT 299 (584)
| .+|.++. .-|+. +|.|=..+.. -.+++.++++ +.+|+ +.+ | .+
T Consensus 82 p------------------~~~~i~~---l~~~~~li~~~~~~~d--~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 82 P------------------LDDEIAL---LNPGTTLVSFIWPAQN--PELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp C------------------CHHHHTT---CCTTCEEEECCCGGGC--HHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred C------------------CHHHHHH---hcCCCcEEEEecCCCC--HHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 2 1233222 22443 4444443322 2345555554 66663 222 2 45
Q ss_pred HHHHHHHHHHHHHHhCCCC-----------CCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 300 AGVALAGLLGTVRAQGLSL-----------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 300 aaV~LAgll~Alr~~g~~l-----------~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
....+|| .+|++..+..+ .++...+|+|+|+|.+|..+++++... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5556665 44444432211 023348999999999999999877653 42 588999864
Q ss_pred ccccCCCCCC-------h-----hhhccccccCC-cCCcccCCCHHHHhcccCCcEEEeecCCC-----CCCCHHHHHHh
Q 007939 369 LITKERKNLD-------P-----AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAM 430 (584)
Q Consensus 369 Li~~~r~~l~-------~-----~k~~fA~~~~~-~~~~~~~~~L~evV~~vkptvLIG~S~~~-----g~Fteevv~~M 430 (584)
-.......+. . .+-.|++...+ +. .....+|.++++. .|++|++...| .+++++.++.|
T Consensus 206 ~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 3211000010 0 00001110000 00 0001147788876 89999985443 67999999999
Q ss_pred hhcCCCCCeEEecCCCC
Q 007939 431 RESDSVKPAIFAMSNPT 447 (584)
Q Consensus 431 ~~~~~erPIIFaLSNPt 447 (584)
. +..+|+-+|+|.
T Consensus 283 k----~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K----AGSVIVDLAAQN 295 (401)
T ss_dssp C----TTCEEEETTGGG
T ss_pred C----CCcEEEEEcCCC
Confidence 4 578999999873
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.00 E-value=6.8e-05 Score=81.80 Aligned_cols=131 Identities=21% Similarity=0.283 Sum_probs=97.2
Q ss_pred ccCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhh
Q 007939 288 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 357 (584)
Q Consensus 288 ~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA 357 (584)
.+|+| .|+.+||+..++.++. |.++..|.. .+++|+|+|..|.++|+.+... |.
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA----- 289 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA----- 289 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC-----
Confidence 38999 6889999999999886 788988888 9999999998888888777653 43
Q ss_pred cCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCC
Q 007939 358 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (584)
Q Consensus 358 ~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~er 437 (584)
+++++|++.. +...+.... .+..++.++++. .|+++-.++..+.++.+.++.|. +.
T Consensus 290 --~Viv~D~~~~-----------~a~~Aa~~g-----~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk----~g 345 (488)
T 3ond_A 290 --RVIVTEIDPI-----------CALQATMEG-----LQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK----NN 345 (488)
T ss_dssp --EEEEECSCHH-----------HHHHHHHTT-----CEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC----TT
T ss_pred --EEEEEcCCHH-----------HHHHHHHhC-----CccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC----CC
Confidence 6888887421 111111100 012346666665 89999888888999999999994 57
Q ss_pred CeEEecCCCCCccCCCHHHHhcc
Q 007939 438 PAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 438 PIIFaLSNPt~~aE~tpeda~~w 460 (584)
.||+-.+++.. |+..++.-.|
T Consensus 346 aiVvNaG~~~~--Ei~~~~l~~~ 366 (488)
T 3ond_A 346 AIVCNIGHFDN--EIDMLGLETH 366 (488)
T ss_dssp EEEEESSSTTT--TBTHHHHHTS
T ss_pred eEEEEcCCCCc--ccchHHHHHh
Confidence 89999999855 8888776555
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.97 E-value=5.3e-05 Score=82.03 Aligned_cols=234 Identities=15% Similarity=0.195 Sum_probs=139.9
Q ss_pred ccCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhh
Q 007939 288 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 357 (584)
Q Consensus 288 ~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA 357 (584)
.+|+| .|+..||+-.++.|+. |.++..+.. .+++|+|.|..|.++|+.+... |.
T Consensus 208 ~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga----- 271 (464)
T 3n58_A 208 PFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA----- 271 (464)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC-----
Confidence 37888 6778999999988885 567888888 9999999999999999888654 43
Q ss_pred cCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCC
Q 007939 358 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (584)
Q Consensus 358 ~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~er 437 (584)
+++.+|.+. .....|... + ....+|.|+++. .|+++-+++..+.++++.++.|. +.
T Consensus 272 --~Viv~d~dp-----------~~a~~A~~~----G-~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK----~G 327 (464)
T 3n58_A 272 --RVKVTEVDP-----------ICALQAAMD----G-FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK----DM 327 (464)
T ss_dssp --EEEEECSSH-----------HHHHHHHHT----T-CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC----TT
T ss_pred --EEEEEeCCc-----------chhhHHHhc----C-ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC----CC
Confidence 688887632 111111110 0 012579999987 99999988878999999999994 57
Q ss_pred CeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCC-CccccCCCeee-eccCccccccchhhHHHHHHhCCcccCHHHH
Q 007939 438 PAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPF-ENVDLGNGKIG-HVNQANNMYLFPGIGLGTLLSGARFITDGML 515 (584)
Q Consensus 438 PIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf-~pv~~~~G~~~-~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~ 515 (584)
.||.-.++... |+..+...+++ +.-+ -|. +.++++|||.. .-+++. -+=||+-......|-|.-|
T Consensus 328 AILINvGRgdv--EID~~aL~~~~--~~~i---k~~v~~~~~~~g~~i~lLaeGr------lvNL~~a~GhP~~vm~~sf 394 (464)
T 3n58_A 328 CIVGNIGHFDN--EIQVAALRNLK--WTNV---KPQVDLIEFPDGKRLILLSEGR------LLNLGNATGHPSFVMSASF 394 (464)
T ss_dssp EEEEECSSSTT--TBTCGGGTTSE--EEEE---ETTEEEEECTTSCEEEEEGGGS------BHHHHHSCCSCHHHHHHHH
T ss_pred eEEEEcCCCCc--ccCHHHHHhCc--cccc---cCCeeEEEeCCCCEEEEEeCCc------eecccCCCCChHHHHhHHH
Confidence 88888888765 66655443321 0000 011 11223344322 222221 1334554434444444445
Q ss_pred HHHHHHHhccCCC-CCCCCCccccCCCCcccchHHHHHHHHHHHHH-cCccCCCCCCChh--HhhhhhccCCC
Q 007939 516 QQAAECLASYMTD-EEIPKGILYPSIDSIRDITAEVGAAVLRAAVE-EDLAEGHGEVGPR--DLKHMSKVGPY 584 (584)
Q Consensus 516 ~aAA~alA~~v~~-~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~-~g~A~~~~~~~~~--~~~~~~~~~~~ 584 (584)
..-+-+.-.+.+. +++..+ +|+ +-.++=..||+.-.+ -|+ .+.+++++ +-+....+|||
T Consensus 395 ~~Q~la~~~l~~~~~~~~~~-v~~-------lP~~lDe~VA~l~L~~~g~--~l~~lt~~Q~~yl~~~~~gp~ 457 (464)
T 3n58_A 395 TNQVLGQIELFTRTDAYKNE-VYV-------LPKHLDEKVARLHLDKLGA--KLTVLSEEQAAYIGVTPQGPF 457 (464)
T ss_dssp HHHHHHHHHHHHSGGGCCSS-EEC-------CCHHHHHHHHHHHHGGGTC--CCCCCCHHHHHHHTCCTTSCC
T ss_pred HHHHHHHHHHHhCccccCCC-eeE-------CCHHHHHHHHHHHHHHcCC--EeccCCHHHHHHcCCCCCCCC
Confidence 4333333333332 223322 333 334555677766653 343 23456675 55667788887
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.06 E-value=0.0076 Score=62.95 Aligned_cols=238 Identities=15% Similarity=0.176 Sum_probs=120.0
Q ss_pred CChhhHHHHHhcCCCCCceEEEEecCceeeccCCCCC--CcccccchhhhhhhhhcCCCCCCceeEEeeccCC-----cc
Q 007939 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQ 227 (584)
Q Consensus 155 ~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTn-----N~ 227 (584)
-++..++++.+. +.+|+|.++++...|+.|... .|..|..++-.++ ++. .++|.+.+- ++
T Consensus 18 l~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~ 84 (384)
T 1l7d_A 18 ISPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGT 84 (384)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSC
T ss_pred CCHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCH
Confidence 356677777763 578999999999999999876 4888888876665 333 356655321 11
Q ss_pred ccc----cCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCChHHHHHHHHhhccCccccCcchhHHHH
Q 007939 228 KLL----EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVA 303 (584)
Q Consensus 228 ~Ll----~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~ 303 (584)
+.+ ..-.+++.-|.- ++ .+.++++.++--. ++.+|-.....+ ...+++|+ ....
T Consensus 85 ~~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~gi~-~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 85 DEVALIKEGAVLMCHLGAL-----TN---RPVVEALTKRKIT-AYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp CGGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHTTCE-EEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHHhhccCCEEEEEeccc-----CC---HHHHHHHHHCCCE-EEEecccccccc-------ccccchhh------HHHH
Confidence 110 011111211110 00 0112222222111 222222211000 00111221 1112
Q ss_pred HH---HHHHHHHHhCCCC-------CCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC
Q 007939 304 LA---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (584)
Q Consensus 304 LA---gll~Alr~~g~~l-------~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~ 373 (584)
+| +++.+.+..++.. .++...+++|+|+|.+|..++..+... |. +++.+|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHH
Confidence 22 5556666555411 133349999999999999998876553 42 48889975321000
Q ss_pred CCCCC-------h-------hhhccccccC-CcCCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhc
Q 007939 374 RKNLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRES 433 (584)
Q Consensus 374 r~~l~-------~-------~k~~fA~~~~-~~~~~~~~~~L~evV~~vkptvLIG~S~~-----~g~Fteevv~~M~~~ 433 (584)
...+. . .+-.|++... ++. ......+.+.++. .|++|.++.. +..++++.++.|.
T Consensus 211 ~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFR-KKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HHHTTCEECCC------------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HHHcCCeEEeecccccccccccccchhhcCHHHH-hhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 00000 0 0001111100 000 0001127777875 9999998832 3568999999994
Q ss_pred CCCCCeEEecCCC
Q 007939 434 DSVKPAIFAMSNP 446 (584)
Q Consensus 434 ~~erPIIFaLSNP 446 (584)
+..+|+-+|-+
T Consensus 286 --~g~vivdva~~ 296 (384)
T 1l7d_A 286 --PGSVIIDLAVE 296 (384)
T ss_dssp --TTCEEEETTGG
T ss_pred --CCCEEEEEecC
Confidence 57789988854
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.69 E-value=0.00091 Score=71.43 Aligned_cols=111 Identities=22% Similarity=0.309 Sum_probs=69.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCC--------------hhhhccccccC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDPG 389 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~--------------~~k~~fA~~~~ 389 (584)
.||+|+|+|.+|..+|+++... |. +++++|++.-..+....+. +.+..|++...
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC-----------------
T ss_pred CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcc
Confidence 8999999999999999988764 42 6899998753211000000 00112333211
Q ss_pred C-cCCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCC-CCCccCCC
Q 007939 390 D-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECT 453 (584)
Q Consensus 390 ~-~~~~~~~~~L~evV~~vkptvLIG~S~~-----~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~~aE~t 453 (584)
+ +. ..+..+|.|+++. .|++|++... +.+||+++|+.|. +..||+-+|- |-...|.|
T Consensus 259 ~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk----~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 259 GEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK----PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC----TTCEEEETTGGGTCSBTTC
T ss_pred hhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC----CCCEEEEEeCCCCCCcccc
Confidence 0 00 0012479999988 9999998533 4579999999994 6899999994 33344554
No 15
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.19 E-value=0.04 Score=55.12 Aligned_cols=140 Identities=13% Similarity=0.117 Sum_probs=90.4
Q ss_pred HHHHHHHhhc-cCccccC------cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcC
Q 007939 279 FETLERYRKR-FCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAG 351 (584)
Q Consensus 279 f~lL~ryr~~-~~~FNDD------iQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~G 351 (584)
..+.+..+++ +.++|-. .-.+-+|+=.++..++...+..+.. .+++|+|+|..|..+|+.+... |
T Consensus 107 id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G 178 (293)
T 3d4o_A 107 TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGRVGMSVARKFAAL-----G 178 (293)
T ss_dssp HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCHHHHHHHHHHHhC-----C
Confidence 4444555544 7777743 3345555555565666677777877 9999999999999999887653 4
Q ss_pred CChhhhcCcEEEEecCcccccCCCCCChhhhccccc-cCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 007939 352 NNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (584)
Q Consensus 352 ls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~-~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M 430 (584)
. +++.+|+.. .+...++. ...+ ....+|.|+++. .|++|-.. ..+.++++.++.|
T Consensus 179 ~-------~V~~~dr~~-----------~~~~~~~~~g~~~---~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~m 234 (293)
T 3d4o_A 179 A-------KVKVGARES-----------DLLARIAEMGMEP---FHISKAAQELRD--VDVCINTI-PALVVTANVLAEM 234 (293)
T ss_dssp C-------EEEEEESSH-----------HHHHHHHHTTSEE---EEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHS
T ss_pred C-------EEEEEECCH-----------HHHHHHHHCCCee---cChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhc
Confidence 2 688888752 01111110 0000 012468888876 99999665 4689999999998
Q ss_pred hhcCCCCCeEEecC-CCCCccCCCHHHH
Q 007939 431 RESDSVKPAIFAMS-NPTMNAECTAADA 457 (584)
Q Consensus 431 ~~~~~erPIIFaLS-NPt~~aE~tpeda 457 (584)
. +..+|+=+| +|. ++..+.+
T Consensus 235 k----~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 235 P----SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp C----TTCEEEECSSTTC---SBCHHHH
T ss_pred C----CCCEEEEecCCCC---CCCHHHH
Confidence 3 467888888 454 3455444
No 16
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.03 E-value=0.073 Score=57.23 Aligned_cols=185 Identities=16% Similarity=0.175 Sum_probs=126.3
Q ss_pred CCChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHH-H-HHHHHhhcc-----Ccc----------ccCcchhHHHH
Q 007939 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF-E-TLERYRKRF-----CMF----------NDDIQGTAGVA 303 (584)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf-~-lL~ryr~~~-----~~F----------NDDiQGTaaV~ 303 (584)
..+..|-..|...|++++.+.- |+.-|-=+|++..-.. . +.+.|+... .++ .+--.-||--+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3456677788999999998876 8777878999874222 1 556775321 122 23345688888
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhh-h
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 382 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k-~ 382 (584)
..++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88899999999998888 9999999999999999998764 42 3467999999999654 344332 1
Q ss_pred ccccccCCcCCc-ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 383 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 383 ~fA~~~~~~~~~-~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
.+......+.+. ....+-.++ -.++.||||=++. .+..|++-++.+ ...+|.--+| |+.
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~-~n~I~~~~a~~l-----~ak~V~EgAN~p~t 330 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEEL-LEKDCDILVPAAI-SNQITAKNAHNI-----QASIVVERANGPTT 330 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSC-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHHhCCCCCCCcEEecCccc-eeccccEEeecCc-ccccChhhHhhc-----CceEEEcCCCCCCC
Confidence 222111101000 011223333 3568999998886 599999988877 4678988888 653
No 17
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.96 E-value=0.0046 Score=65.59 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=65.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCC-------C---hhhhccccccCC-cC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-FM 392 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l-------~---~~k~~fA~~~~~-~~ 392 (584)
.|++|+|+|.+|..+|+.+... |. +++++|++.-..+.-..+ + .....|++...+ +.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 8999999999999999988765 32 589999864211000000 0 000112211000 00
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 393 GLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 393 ~~~~~~~L~evV~~vkptvLIG~S~~-----~g~Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
.....+|.|+++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 253 -~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk----pGsVIVDvA~d~ 305 (381)
T 3p2y_A 253 -AQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ----PGSVVVDLAGET 305 (381)
T ss_dssp -HHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC----TTCEEEETTGGG
T ss_pred -hhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC----CCcEEEEEeCCC
Confidence 0012468899987 9999997433 3579999999994 688999998543
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.73 E-value=0.37 Score=52.18 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=125.5
Q ss_pred cCCChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHH--HHHHHHh---hcc-Ccc----------ccCcchhHHHH
Q 007939 241 PRLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYR---KRF-CMF----------NDDIQGTAGVA 303 (584)
Q Consensus 241 ~R~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf--~lL~ryr---~~~-~~F----------NDDiQGTaaV~ 303 (584)
+..+..|-..|...||..+.+.. |+.-|--.|++..-.- -+.+.|+ +.. +|| .+.-..||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34577888889999999987776 8888999999754321 1344443 332 232 23334488777
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhc
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~ 383 (584)
.-++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .|+..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 88888999999999888 9999999999999999988764 43 3466789999988653 35543321
Q ss_pred cccccCCcCCcccCCCHHH-------------HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 384 FAKDPGDFMGLREGASLLE-------------VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 384 fA~~~~~~~~~~~~~~L~e-------------vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
...+... .....+.+ -+-.++.|||+=+.. .+..|++-++.+.+ +...+|.-=+| |+.
T Consensus 284 ~l~e~k~----~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a--~g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 284 RLIEIKS----SRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIA--NGVKAVAEGANMPTT 355 (450)
T ss_dssp HHHHHHT----STTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhc----ccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHh--cCceEEecCCCCCCC
Confidence 1110000 00011111 133468999998886 68999999999954 34568888788 653
No 19
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.69 E-value=0.015 Score=60.01 Aligned_cols=141 Identities=17% Similarity=0.134 Sum_probs=98.6
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCC--ChHHHHHHHHh--hccCccc----------cCcchhHHHHHHHHHHHHHH
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQM--KWAFETLERYR--KRFCMFN----------DDIQGTAGVALAGLLGTVRA 313 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~--~nAf~lL~ryr--~~~~~FN----------DDiQGTaaV~LAgll~Alr~ 313 (584)
+|+.+.+.++- |++ ++|+==.+. -+..++++.-. +.+=.|| +...+-.-+|-.|++-.++.
T Consensus 79 ~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~ 158 (301)
T 1a4i_A 79 SEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158 (301)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHH
Confidence 56666666664 543 777654444 55666665542 2222222 11234456788899999999
Q ss_pred hCCCCCCCCCceEEEeCcc-hhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcC
Q 007939 314 QGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM 392 (584)
Q Consensus 314 ~g~~l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~ 392 (584)
.+.+++. .++|++|+| ..|.-+|.++... | .++++++++
T Consensus 159 ~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------------------- 198 (301)
T 1a4i_A 159 TGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------------------- 198 (301)
T ss_dssp TTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------------------
T ss_pred cCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC-------------------------
Confidence 9999988 999999999 5799988888663 3 358888743
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 393 ~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
..+|.+.++. +|++|++.+.++.+|+++|+ +--+|+=++-|
T Consensus 199 ----t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ----TAHLDEEVNK--GDILVVATGQPEMVKGEWIK-------PGAIVIDCGIN 239 (301)
T ss_dssp ----CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCB
T ss_pred ----cccHHHHhcc--CCEEEECCCCcccCCHHHcC-------CCcEEEEccCC
Confidence 1358999988 99999999999999998875 24466666643
No 20
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.61 E-value=0.02 Score=58.65 Aligned_cols=130 Identities=18% Similarity=0.189 Sum_probs=89.3
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHH--hhccCcccc---------CcchhHHHHHHHHHHHHHHhCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFND---------DIQGTAGVALAGLLGTVRAQGL 316 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ry--r~~~~~FND---------DiQGTaaV~LAgll~Alr~~g~ 316 (584)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.- .+.+=.||. +..+-.-+|-.|++..++..+.
T Consensus 78 ~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~PcTp~gv~~lL~~~~i 157 (285)
T 3l07_A 78 SELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGI 157 (285)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 56666666664 543 6666444444555555443 222222221 1023345677889999999999
Q ss_pred CCCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcc
Q 007939 317 SLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (584)
+|+. .++|++|+|. .|..+|.++... |. .+.+++|+
T Consensus 158 ~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~---------------------------- 194 (285)
T 3l07_A 158 KTEG---AYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF---------------------------- 194 (285)
T ss_dssp CCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT----------------------------
T ss_pred CCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC----------------------------
Confidence 9999 9999999876 799999888763 32 47777652
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHH
Q 007939 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLK 428 (584)
Q Consensus 396 ~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~ 428 (584)
..+|.+.++. +|++|.+.+.++.+++++|+
T Consensus 195 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 -TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp -CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred -chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1348899988 99999999999999998774
No 21
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.56 E-value=0.021 Score=58.46 Aligned_cols=130 Identities=17% Similarity=0.215 Sum_probs=92.8
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHH--hhccCccc---------cCcchhHHHHHHHHHHHHHHhCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFN---------DDIQGTAGVALAGLLGTVRAQGL 316 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ry--r~~~~~FN---------DDiQGTaaV~LAgll~Alr~~g~ 316 (584)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.- .+.+=.|| .+-.|-.-+|-.|++..++..+.
T Consensus 77 ~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i 156 (285)
T 3p2o_A 77 NELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEI 156 (285)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 56667776665 543 7776544555556666554 22222222 22223456788899999999999
Q ss_pred CCCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcc
Q 007939 317 SLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (584)
+++. .++|++|+|. .|..+|.++... |. .+.+++|+
T Consensus 157 ~l~G---k~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~---------------------------- 193 (285)
T 3p2o_A 157 DLEG---KDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK---------------------------- 193 (285)
T ss_dssp CCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT----------------------------
T ss_pred CCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC----------------------------
Confidence 9999 9999999876 799999888763 32 47777752
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHH
Q 007939 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLK 428 (584)
Q Consensus 396 ~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~ 428 (584)
..+|.+.++. +|++|.+.+.++.++.++|+
T Consensus 194 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 223 (285)
T 3p2o_A 194 -TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK 223 (285)
T ss_dssp -CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC
T ss_pred -chhHHHHhhc--CCEEEECCCCCCcCCHHHcC
Confidence 1348899988 99999999999999998874
No 22
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.41 E-value=0.13 Score=55.27 Aligned_cols=181 Identities=18% Similarity=0.201 Sum_probs=122.4
Q ss_pred CChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChH--HHHHHHHhhc---c--Ccc----------ccCcchhHHHHH
Q 007939 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR---F--CMF----------NDDIQGTAGVAL 304 (584)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nA--f~lL~ryr~~---~--~~F----------NDDiQGTaaV~L 304 (584)
.+..|-..|...|++++.+.- |+.-|-=+|++..-. --+.+.|+.. . .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 455677788999999998877 888888899987532 2356666431 0 111 233345777777
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEE-EEecCcccccCCCCCChhhh-
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 382 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLi~~~r~~l~~~k~- 382 (584)
-++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+..+.
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~-Gld~~~l~ 266 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE-GLDVAEVL 266 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC-CCCHHHHH
Confidence 7888889999998888 9999999999999999888653 42 466 999999988754 3443321
Q ss_pred ccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 383 PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 383 ~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
.+......+.+- . .+-.| +-.++.|||+=++. .+..|++-.+.+ ...||.--+| |++
T Consensus 267 ~~~~~~g~v~~~-~-~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l-----~ak~V~EgAN~p~t 324 (419)
T 3aoe_E 267 SAYEATGSLPRL-D-LAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV-----QAQAVVEVANFGLN 324 (419)
T ss_dssp HHHHHHSSCSCC-C-BCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC-----CCSEEEECSTTCBC
T ss_pred HHHHhhCCccee-e-ccchh-hhccCceEEEeccc-ccccccchHhhC-----CceEEEECCCCcCC
Confidence 111111111000 0 00012 34578999998875 799999998887 3679999998 654
No 23
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.40 E-value=0.024 Score=58.09 Aligned_cols=142 Identities=19% Similarity=0.197 Sum_probs=94.7
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHH--hhccCccccC--------cchhHHHHHHHHHHHHHHhCCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ry--r~~~~~FNDD--------iQGTaaV~LAgll~Alr~~g~~ 317 (584)
+|+.+.+.++. |++ ++|+==.+.-+..++++.- .+.+=.||.- ..+-.-+|-.|++..++..+.+
T Consensus 79 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g~~~~~PcTp~gv~~lL~~~~i~ 158 (286)
T 4a5o_A 79 DDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGAD 158 (286)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCC
Confidence 66777776665 543 6666433444445555433 1222222211 1233456778899999999999
Q ss_pred CCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
++. .++|++|+|. .|..+|.++... |. .+.+++|+
T Consensus 159 l~G---k~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~----------------------------- 194 (286)
T 4a5o_A 159 LYG---MDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF----------------------------- 194 (286)
T ss_dssp CTT---CEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 998 9999999875 899999888763 32 47777542
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEec-CCCC
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM-SNPT 447 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaL-SNPt 447 (584)
..+|.+.++. +|++|.+.+.++.++.++|+. .-+|+=+ +||.
T Consensus 195 T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk~-------GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 TRDLADHVSR--ADLVVVAAGKPGLVKGEWIKE-------GAIVIDVGINRQ 237 (286)
T ss_dssp CSCHHHHHHT--CSEEEECCCCTTCBCGGGSCT-------TCEEEECCSCSS
T ss_pred CcCHHHHhcc--CCEEEECCCCCCCCCHHHcCC-------CeEEEEeccccc
Confidence 1358899988 999999999999999988743 3355554 3554
No 24
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.35 E-value=0.042 Score=56.58 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=93.5
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHHh--hccCccc----------cCcchhHHHHHHHHHHHHHHhC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN----------DDIQGTAGVALAGLLGTVRAQG 315 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ryr--~~~~~FN----------DDiQGTaaV~LAgll~Alr~~g 315 (584)
+|+.+.+.++. |++ ++|+==.+.-+..++++.-. +.+=.|| +...|-.-+|-.|++..++..+
T Consensus 81 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~ 160 (300)
T 4a26_A 81 EVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCG 160 (300)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcC
Confidence 67777777775 554 77775445555566655432 2222222 2244556678889999999999
Q ss_pred CCCCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCc
Q 007939 316 LSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (584)
Q Consensus 316 ~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~ 394 (584)
.+++. .++|++|+|. .|..+|.++... |. .+++++++ +
T Consensus 161 i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~---T----------------------- 199 (300)
T 4a26_A 161 IEMAG---KRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG---T----------------------- 199 (300)
T ss_dssp CCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT---S-----------------------
T ss_pred CCCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC---C-----------------------
Confidence 99999 9999999876 899999988763 32 58888762 0
Q ss_pred ccCCCHH--HHhcccCCcEEEeecCCCCCCCHHHHH
Q 007939 395 REGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVLK 428 (584)
Q Consensus 395 ~~~~~L~--evV~~vkptvLIG~S~~~g~Fteevv~ 428 (584)
.+|. +.++. .|++|.+.+.++.++.++|+
T Consensus 200 ---~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk 230 (300)
T 4a26_A 200 ---STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK 230 (300)
T ss_dssp ---CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC
T ss_pred ---CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC
Confidence 1356 88888 99999999999999998764
No 25
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.34 E-value=0.33 Score=52.61 Aligned_cols=191 Identities=16% Similarity=0.160 Sum_probs=127.1
Q ss_pred CChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHH--HHHHHHhhc---cC-cc----------ccCcchhHHHHHH
Q 007939 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYRKR---FC-MF----------NDDIQGTAGVALA 305 (584)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf--~lL~ryr~~---~~-~F----------NDDiQGTaaV~LA 305 (584)
.+..|...|-..||..+.+.. |..-|-=+|++..-.. -+.+.|+.. .+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 456778888888999886655 8888888999864321 245666532 21 11 1122347777777
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhc--
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP-- 383 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~-- 383 (584)
++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~-Gld~~~l~~~ 289 (456)
T 3r3j_A 225 FAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN-GFTKEQLNYI 289 (456)
T ss_dssp HHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHHHH
Confidence 788888888988888 9999999999999999988764 42 3345899999998653 35433221
Q ss_pred -------------cccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCCc
Q 007939 384 -------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTMN 449 (584)
Q Consensus 384 -------------fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~~ 449 (584)
|+...+... .-.... +-.++.||||=+.. ++..|++-++.+.+ +..+||.--+| |+.
T Consensus 290 ~~~k~~~~~~v~~~~~~~~~a~-~v~~~~----i~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T- 360 (456)
T 3r3j_A 290 MDIKNNQRLRLKEYLKYSKTAK-YFENQK----PWNIPCDIAFPCAT-QNEINENDADLFIQ--NKCKMIVEGANMPTH- 360 (456)
T ss_dssp HHHHHTSCCCGGGGGGTCSSCE-EECSCC----GGGSCCSEEEECSC-TTCBCHHHHHHHHH--HTCCEEECCSSSCBC-
T ss_pred HHHHHhcCcchhhhhhcCCCce-EeCCcc----ccccCccEEEeCCC-ccchhhHHHHHHHh--cCCeEEEecCCCCCC-
Confidence 111000000 001122 33568999998886 79999999999842 45789999999 754
Q ss_pred cCCCHHHHhc
Q 007939 450 AECTAADAFK 459 (584)
Q Consensus 450 aE~tpeda~~ 459 (584)
.| +++.+.
T Consensus 361 ~e--A~~iL~ 368 (456)
T 3r3j_A 361 IK--ALHKLK 368 (456)
T ss_dssp TT--HHHHHH
T ss_pred HH--HHHHHH
Confidence 23 556555
No 26
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.25 E-value=0.022 Score=58.43 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=96.5
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHHh--hccCcccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ryr--~~~~~FND--------DiQGTaaV~LAgll~Alr~~g~~ 317 (584)
+|+.+.+.++- |++ ++|+==.+.-+..++++.-. +.+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 77 ~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 77 AELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 56666666664 543 77775445555555554431 11211221 11244567888899999999999
Q ss_pred CCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
++. .++|++|+|. .|.-+|.++... | ..+++++|+
T Consensus 157 l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~----------------------------- 192 (288)
T 1b0a_A 157 TFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF----------------------------- 192 (288)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS-----------------------------
T ss_pred CCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-----------------------------
Confidence 999 9999999995 698888887653 3 358888642
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 193 t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk-------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK-------EGAIVIDVGIN 233 (288)
T ss_dssp CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC-------TTCEEEECCCE
T ss_pred chhHHHHhcc--CCEEEECCCCcCcCCHHHcC-------CCcEEEEccCC
Confidence 1358999988 99999999999999998874 23466666543
No 27
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.23 E-value=0.2 Score=54.16 Aligned_cols=183 Identities=14% Similarity=0.164 Sum_probs=121.8
Q ss_pred CChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCCh--HHHHHHHHhhc---c--Ccc----------ccCcchhHHHHH
Q 007939 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---F--CMF----------NDDIQGTAGVAL 304 (584)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~n--Af~lL~ryr~~---~--~~F----------NDDiQGTaaV~L 304 (584)
.+..|-..|...|+.++.+.- |+.-|-=+|++..- ---+.+.|+.. . .++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 455677788999999999887 88888889998742 12255666431 1 222 233345777777
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEE-EEecCcccccCCCCCChhhh-
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 382 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLi~~~r~~l~~~k~- 382 (584)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+....
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~-Gld~~~l~ 283 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEA-GIDPYDLL 283 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCC-CCCHHHHH
Confidence 7788889999998888 9999999999999999888663 42 455 999999988754 3332221
Q ss_pred ccccccCCcCCc--ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 383 PFAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 383 ~fA~~~~~~~~~--~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
.+......+.+. ....+-.|+ -.++.||||=++. ++..|++-++.+ ...+|.--+| |+.
T Consensus 284 ~~~~~~g~i~~y~~a~~i~~~ei-~~~~~DIlvPcA~-~n~i~~~na~~l-----~ak~VvEgAN~p~t 345 (440)
T 3aog_A 284 RHVQEFGGVRGYPKAEPLPAADF-WGLPVEFLVPAAL-EKQITEQNAWRI-----RARIVAEGANGPTT 345 (440)
T ss_dssp HHHHHTSSSTTCTTSEECCHHHH-TTCCCSEEEECSS-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHhcCCcccCCCceEcCchhh-hcCCCcEEEecCC-cCccchhhHHHc-----CCcEEEecCccccC
Confidence 111111111110 011233443 4578999998776 688898888877 3678888888 653
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.05 E-value=0.032 Score=56.88 Aligned_cols=128 Identities=9% Similarity=0.124 Sum_probs=90.4
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHH--hhccCccccC--------cchhHHHHHHHHHHHHHHhCCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ry--r~~~~~FNDD--------iQGTaaV~LAgll~Alr~~g~~ 317 (584)
+|+.+.++++. |++ ++|+==.+.-+..++++.- .+.+=.||.- ..+-.-+|-.|++..++..+
T Consensus 70 ~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~-- 147 (276)
T 3ngx_A 70 KDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG-- 147 (276)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--
Confidence 67777777765 654 7776544445555565543 2233333322 22344578889999999998
Q ss_pred CCCCCCceEEEeCcc-hhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
++. .++|++|+| ..|..+|.++... |. .+++++++
T Consensus 148 l~G---k~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~----------------------------- 183 (276)
T 3ngx_A 148 YHE---NTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK----------------------------- 183 (276)
T ss_dssp CCS---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred cCC---CEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 777 999999998 4899999988763 32 57887652
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHH
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLK 428 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~Fteevv~ 428 (584)
..+|.+.++. +|++|.+.+.++.+++++|+
T Consensus 184 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1358899988 99999999999999987763
No 29
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.86 E-value=0.18 Score=50.26 Aligned_cols=123 Identities=14% Similarity=0.144 Sum_probs=75.4
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
..||.|+|+|..|.++|..+.. .|... .+++++|++- +.+...++.| . .....++.|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~~----~~V~v~dr~~------~~~~~l~~~~---g-----i~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYDP----NRICVTNRSL------DKLDFFKEKC---G-----VHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCCG----GGEEEECSSS------HHHHHHHHTT---C-----CEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCCC----CeEEEEeCCH------HHHHHHHHHc---C-----CEEeCChHH
Confidence 3789999999999999988765 35432 4789888741 1122111111 0 112357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCCCccCCCHHHHhcccC--CcEEEEeCCCCCccccC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVFASGSPFENVDLG 479 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~-~~erPIIFaLSNPt~~aE~tpeda~~wT~--Grai~AsGSPf~pv~~~ 479 (584)
+++. +|++| ++..+ ...+++++.+... ..++.+|...++..+. +..-+|.. .+++-+ -|+.|....
T Consensus 60 ~~~~--aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~~-----~~l~~~l~~~~~vvr~--mPn~p~~v~ 128 (280)
T 3tri_A 60 GALN--ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVTT-----PLIEKWLGKASRIVRA--MPNTPSSVR 128 (280)
T ss_dssp HHSS--CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCCH-----HHHHHHHTCCSSEEEE--ECCGGGGGT
T ss_pred HHhc--CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCCH-----HHHHHHcCCCCeEEEE--ecCChHHhc
Confidence 9987 88877 44334 4457888888543 3566688888887763 33334443 244333 477777664
No 30
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.67 E-value=0.3 Score=52.33 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=109.6
Q ss_pred CChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChH--HHHHHHHhhcc------Ccc----------ccCcchhHHHH
Q 007939 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKRF------CMF----------NDDIQGTAGVA 303 (584)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nA--f~lL~ryr~~~------~~F----------NDDiQGTaaV~ 303 (584)
.+..|-..|...|++++.+.- |+.-|-=+|++..-. --+.+.|+... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 355677788999999999877 888888899997522 23566775321 122 22223466666
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC-----cccccCCCCCC
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-----GLITKERKNLD 378 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~-----GLi~~~r~~l~ 378 (584)
.-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|++.. .|+
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~-Gld 260 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNEN-GID 260 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSS-CCC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCC-CCC
Confidence 77788888999988888 9999999999999999888663 43 234489999 9998754 343
Q ss_pred hhhh-ccccccCCcCCcc--cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007939 379 PAAA-PFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (584)
Q Consensus 379 ~~k~-~fA~~~~~~~~~~--~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt 447 (584)
.... .+......+.+.+ ...+-.+ +-.++.||||=++. ++..|++-.+.+ ...+|.-=+| |+
T Consensus 261 ~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l-----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 261 FKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI-----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC-----CCSEEECCSSSCS
T ss_pred HHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc-----CCeEEEeCCcccc
Confidence 3221 1111100000000 0011112 23456777776654 677777777765 3556666666 54
No 31
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.34 E-value=0.093 Score=53.60 Aligned_cols=158 Identities=16% Similarity=0.230 Sum_probs=109.2
Q ss_pred cCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHC--CCe---eeEeccCCCChHHHHH
Q 007939 208 AGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW--PKA---IVQFEDFQMKWAFETL 282 (584)
Q Consensus 208 gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~--P~~---lIqfEDf~~~nAf~lL 282 (584)
-||+ +.-+.|+-.|.. +|+.+.+.++- |++ ++|+==.+.-+..+++
T Consensus 60 ~Gi~---~~~~~lp~~~s~--------------------------~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~ 110 (281)
T 2c2x_A 60 VGIT---SIRRDLPADIST--------------------------ATLNETIDELNANPDCTGYIVQLPLPKHLDENAAL 110 (281)
T ss_dssp HTCE---EEEEEECTTCCH--------------------------HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHH
T ss_pred cCCE---EEEEECCCCCCH--------------------------HHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHH
Confidence 6888 777777765542 56666666664 654 8887655666666666
Q ss_pred HHHh--hccCccccC--------cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHc-
Q 007939 283 ERYR--KRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMA- 350 (584)
Q Consensus 283 ~ryr--~~~~~FNDD--------iQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~- 350 (584)
+.-. +.+=.||.- ..+-.-+|-.|++-.++..+.+++. .++|++|+|. .|.-+|.++... .
T Consensus 111 ~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~l~g---k~vvVvG~s~iVG~p~A~lL~~~----g~ 183 (281)
T 2c2x_A 111 ERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDISIAG---AHVVVIGRGVTVGRPLGLLLTRR----SE 183 (281)
T ss_dssp HHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHTST----TT
T ss_pred hhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC---CEEEEECCCcHHHHHHHHHHhcC----CC
Confidence 6542 222222211 1244567778899999999998888 9999999996 588877776541 1
Q ss_pred CCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 007939 351 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (584)
Q Consensus 351 Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M 430 (584)
| ..+++++|+ ..+|.+.++. +|++|+..+.++.+|+++|+.
T Consensus 184 ~-------atVtv~h~~-----------------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk~- 224 (281)
T 2c2x_A 184 N-------ATVTLCHTG-----------------------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVRP- 224 (281)
T ss_dssp C-------CEEEEECTT-----------------------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSCT-
T ss_pred C-------CEEEEEECc-----------------------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcCC-
Confidence 2 357777532 1358999988 999999999999999988752
Q ss_pred hhcCCCCCeEEecCCC
Q 007939 431 RESDSVKPAIFAMSNP 446 (584)
Q Consensus 431 ~~~~~erPIIFaLSNP 446 (584)
.-+|+=++-|
T Consensus 225 ------GavVIDVgi~ 234 (281)
T 2c2x_A 225 ------GAAVIDVGVS 234 (281)
T ss_dssp ------TCEEEECCEE
T ss_pred ------CcEEEEccCC
Confidence 3477766655
No 32
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.57 E-value=0.055 Score=56.13 Aligned_cols=115 Identities=14% Similarity=0.180 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHH---------hCCCCCCCCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccc
Q 007939 302 VALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLIT 371 (584)
Q Consensus 302 V~LAgll~Alr~---------~g~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~ 371 (584)
+|-.|.+-.++. .|.+++. .++|++|+|. .|.-+|.++... | .+++++|+...-.
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l 214 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQK 214 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEE
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHH
Confidence 444555666666 5777777 9999999995 588888877553 3 2589999875544
Q ss_pred cCCC-CCChhhhccccccCCcCCcccC--CCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 372 KERK-NLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 372 ~~r~-~l~~~k~~fA~~~~~~~~~~~~--~~L~evV~~vkptvLIG~S~~~g~-Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
..|. .+... ++..... ... .+|.++++. .|++|++.+.++. +|.++|+. .-+|+=++-|-
T Consensus 215 ~~ra~~la~~----~~~~t~~---~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk~-------GavVIDVgi~r 278 (320)
T 1edz_A 215 FTRGESLKLN----KHHVEDL---GEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIKE-------GAVCINFACTK 278 (320)
T ss_dssp EESCCCSSCC----CCEEEEE---EECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSCT-------TEEEEECSSSC
T ss_pred HhHHHHHhhh----ccccccc---ccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcCC-------CeEEEEcCCCc
Confidence 4442 23210 1110000 001 469999998 9999999998887 99887642 23666666553
No 33
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.50 E-value=0.71 Score=50.25 Aligned_cols=181 Identities=14% Similarity=0.129 Sum_probs=120.1
Q ss_pred ChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChH--HHHHHHHhhc--c--Ccc----------ccCcchhHHHHHHH
Q 007939 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR--F--CMF----------NDDIQGTAGVALAG 306 (584)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nA--f~lL~ryr~~--~--~~F----------NDDiQGTaaV~LAg 306 (584)
+..|...|-..||..+.+.. |..-|-=+|++..-. --+.+.|+.. . .|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 45667778888888888654 888788899987422 1255666531 1 111 11223466666667
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEE-EEecCcccccCCCCCChhh----
Q 007939 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA---- 381 (584)
Q Consensus 307 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLi~~~r~~l~~~k---- 381 (584)
+-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+..+
T Consensus 239 ~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~l 302 (470)
T 2bma_A 239 VLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEFL 302 (470)
T ss_dssp HHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHHH
T ss_pred HHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHHH
Confidence 88888888988888 9999999999999999988664 42 455 899999888753 353331
Q ss_pred -----------hccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 382 -----------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 382 -----------~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
..|+...+ +. ...+-.+. -.++.||||=+.. ++..|++-++.+.+ +...||.--+| |++
T Consensus 303 ~~~k~~~~g~v~~~~~~~~---~a-~~v~~~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T 373 (470)
T 2bma_A 303 IDLKEEKKGRIKEYLNHSS---TA-KYFPNEKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK--NGCILVGEGANMPST 373 (470)
T ss_dssp HHHHTTTTCCGGGGGGTCS---SC-EECSSCCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhcCCcHHHHHhhcC---Cc-EEecCcCe-eecCccEEEeccc-cCcCCHHHHHHHHh--cCcEEEEeCCCCCCC
Confidence 12221100 00 00000122 2578999998885 79999999999853 56789999998 653
No 34
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=93.49 E-value=0.36 Score=52.59 Aligned_cols=124 Identities=20% Similarity=0.283 Sum_probs=86.4
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC
Q 007939 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (584)
Q Consensus 294 DDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~ 373 (584)
+.+.|+......|+ .|.++..+.. .+++|+|.|..|.++|+.+... |. +++.+|+...
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~---- 291 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI---- 291 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----
T ss_pred hchHhHHHHHhhhh---hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----
Confidence 34455555555663 2567877888 9999999999999999998764 32 6888887521
Q ss_pred CCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCC
Q 007939 374 RKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECT 453 (584)
Q Consensus 374 r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~t 453 (584)
... ..+... ....+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-.. |+.
T Consensus 292 -----~~~-~a~~~g------~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gailiNvgrg~~--EId 351 (479)
T 1v8b_A 292 -----CAI-QAVMEG------FNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK----NNAVVGNIGHFDD--EIQ 351 (479)
T ss_dssp -----HHH-HHHTTT------CEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC----TTCEEEECSSTTT--SBC
T ss_pred -----hHH-HHHHcC------CEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC----CCcEEEEeCCCCc--ccc
Confidence 000 111110 012479999987 99999997778999999999993 4678887776554 666
Q ss_pred HHHHhc
Q 007939 454 AADAFK 459 (584)
Q Consensus 454 peda~~ 459 (584)
-++..+
T Consensus 352 ~~aL~~ 357 (479)
T 1v8b_A 352 VNELFN 357 (479)
T ss_dssp HHHHHT
T ss_pred chhhhc
Confidence 666655
No 35
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.07 E-value=0.066 Score=54.06 Aligned_cols=83 Identities=11% Similarity=0.162 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcc
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~f 384 (584)
.|++.+++..+.+++. .+++|+|||.+|.+++..|.. .|. ++|+++++.. ++ -+.+
T Consensus 102 ~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~~----~~------a~~l 157 (277)
T 3don_A 102 IGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRTM----SR------FNNW 157 (277)
T ss_dssp HHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSCG----GG------GTTC
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCCH----HH------HHHH
Confidence 4577888888888888 999999999777777666554 454 4788888851 11 0112
Q ss_pred ccccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007939 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (584)
Q Consensus 385 A~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~ 417 (584)
+..... ....++.++++. +|++|-++.
T Consensus 158 a~~~~~----~~~~~~~~~~~~--aDiVInaTp 184 (277)
T 3don_A 158 SLNINK----INLSHAESHLDE--FDIIINTTP 184 (277)
T ss_dssp CSCCEE----ECHHHHHHTGGG--CSEEEECCC
T ss_pred HHhccc----ccHhhHHHHhcC--CCEEEECcc
Confidence 211000 012346666766 899996654
No 36
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.05 E-value=0.25 Score=51.78 Aligned_cols=167 Identities=19% Similarity=0.204 Sum_probs=103.9
Q ss_pred CChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCChH--HHHHHHHhhc--cC-cc---ccCcchhHHHHHHHHHHHHHHh
Q 007939 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWA--FETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQ 314 (584)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~nA--f~lL~ryr~~--~~-~F---NDDiQGTaaV~LAgll~Alr~~ 314 (584)
++..+-++++..|.+++..+.-. .|-=+|++..-. --+.++|+-- -+ .+ .|=-.-||-=+.-++-.+++..
T Consensus 90 ~s~~~~e~~~r~~~~~~~~l~g~-~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 90 IDPSTWARILRIHAENIDKLSGN-YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTS-EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cChhhHHHHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 33345567788888888887522 567789876431 1234444411 01 11 1111236666666777888888
Q ss_pred CC-CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCC
Q 007939 315 GL-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (584)
Q Consensus 315 g~-~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~ 393 (584)
|. +|+. .+++|.|.|..|..+|+.+... |. ++++.|++ +....|++...
T Consensus 169 G~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~-----------~~~~~~a~~~g---- 218 (355)
T 1c1d_A 169 GLGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD-----------TERVAHAVALG---- 218 (355)
T ss_dssp TCCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT----
T ss_pred CCCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------ccHHHHHHhcC----
Confidence 87 7877 9999999999999999877553 43 57788874 11122332110
Q ss_pred cccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 394 LREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 394 ~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
....++.|+.+ ++.|+|+=++ ..+.++++-++.| +..||.=-+| |+.
T Consensus 219 -a~~v~~~ell~-~~~DIliP~A-~~~~I~~~~~~~l-----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 219 -HTAVALEDVLS-TPCDVFAPCA-MGGVITTEVARTL-----DCSVVAGAANNVIA 266 (355)
T ss_dssp -CEECCGGGGGG-CCCSEEEECS-CSCCBCHHHHHHC-----CCSEECCSCTTCBC
T ss_pred -CEEeChHHhhc-CccceecHhH-HHhhcCHHHHhhC-----CCCEEEECCCCCCC
Confidence 01123334433 4689999554 5789999999999 2468888887 654
No 37
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=92.99 E-value=1.2 Score=47.61 Aligned_cols=183 Identities=15% Similarity=0.174 Sum_probs=118.6
Q ss_pred ChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCCh--HHHHHHHHhh---c--cCccc----------cCcchhHHHHHH
Q 007939 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRK---R--FCMFN----------DDIQGTAGVALA 305 (584)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~n--Af~lL~ryr~---~--~~~FN----------DDiQGTaaV~LA 305 (584)
+.+|-..|...|+.++.+.- |+.-|-=+|++..- ---+.+.|+. . ..++- +--.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 45667788899999998877 88878889998752 1224456643 1 12232 222346666666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEE-EEecCcccccCCCCCChhhh-c
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA-P 383 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLi~~~r~~l~~~k~-~ 383 (584)
++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +++ +.|++|-+++.. .|+.... .
T Consensus 195 ~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~-Gld~~~l~~ 259 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE-GFDVEELIR 259 (415)
T ss_dssp HHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT-CCCHHHHHH
T ss_pred HHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC-CCCHHHHHH
Confidence 778888889998888 999999999999999988765 1343 454 899999988754 3443221 1
Q ss_pred cccccCCcCCcc--cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 384 FAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 384 fA~~~~~~~~~~--~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
+......+.+.. ...+-.| +-.++.|+||=++. ++..|++-.+.+ ...+|.-=+| |++
T Consensus 260 ~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l-----~ak~V~EgAN~p~t 320 (415)
T 2tmg_A 260 YKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI-----KAKAVVEGANGPTT 320 (415)
T ss_dssp HHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC-----CCSEEECCSSSCBC
T ss_pred HHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc-----CCeEEEeCCCcccC
Confidence 111111111100 1112344 45678999997775 688899888876 3568888887 653
No 38
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.80 E-value=0.31 Score=48.71 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=70.3
Q ss_pred HHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCc
Q 007939 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (584)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~ 391 (584)
+..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- . .+...+..-++.
T Consensus 149 ~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~--~~~~~~~~g~~~---- 203 (300)
T 2rir_A 149 QHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----A--HLARITEMGLVP---- 203 (300)
T ss_dssp HTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----H--HHHHHHHTTCEE----
T ss_pred HhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----H--HHHHHHHCCCeE----
Confidence 345667777 9999999999999999887653 43 688888751 0 011000000000
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHH
Q 007939 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADA 457 (584)
Q Consensus 392 ~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda 457 (584)
....+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+|.-.. +|..+.+
T Consensus 204 ---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk----~g~~lin~a~g~~--~~~~~~a 257 (300)
T 2rir_A 204 ---FHTDELKEHVKD--IDICINTIP-SMILNQTVLSSMT----PKTLILDLASRPG--GTDFKYA 257 (300)
T ss_dssp ---EEGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC----TTCEEEECSSTTC--SBCHHHH
T ss_pred ---EchhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC----CCCEEEEEeCCCC--CcCHHHH
Confidence 012468888876 999997664 5899999988883 4678888886322 3445443
No 39
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.62 E-value=1.4 Score=46.41 Aligned_cols=223 Identities=15% Similarity=0.110 Sum_probs=129.8
Q ss_pred CCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHH
Q 007939 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLG 337 (584)
Q Consensus 263 ~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~G 337 (584)
.|+. .|+--..+..|- .+ +..+ ..+.+.|.-- +.+|=-+++.+|+..|..|..|.+ .+|.|+|.|..|-.
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D~-~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~ 130 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-DL-DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGR 130 (380)
T ss_dssp TSCCCEEEECSSCSTTB-CH-HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHH
T ss_pred CCCceEEEEcCcccchh-hH-HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHH
Confidence 4876 888888887763 22 2222 3477777543 334555899999999999988888 99999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec-
Q 007939 338 VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS- 416 (584)
Q Consensus 338 iA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S- 416 (584)
+|+.+... |+ +++.+|+..- ... .. ....+|.|+++. .|+++=.-
T Consensus 131 vA~~l~~~-----G~-------~V~~~d~~~~-----------~~~---~g------~~~~~l~ell~~--aDvV~l~~P 176 (380)
T 2o4c_A 131 LVEVLRGL-----GW-------KVLVCDPPRQ-----------ARE---PD------GEFVSLERLLAE--ADVISLHTP 176 (380)
T ss_dssp HHHHHHHT-----TC-------EEEEECHHHH-----------HHS---TT------SCCCCHHHHHHH--CSEEEECCC
T ss_pred HHHHHHHC-----CC-------EEEEEcCChh-----------hhc---cC------cccCCHHHHHHh--CCEEEEecc
Confidence 99988754 43 5888887421 000 00 013579999987 89887532
Q ss_pred --C-----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCc
Q 007939 417 --G-----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQA 489 (584)
Q Consensus 417 --~-----~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~ 489 (584)
. ..+.|+++.+..|. +..|+.=.|.-..--|-.-.+|++ +|+..-|.=-=|.+-...+.. .. +
T Consensus 177 lt~~g~~~T~~li~~~~l~~mk----~gailIN~sRG~vvd~~aL~~aL~--~g~i~~A~LDV~~~EP~~~~~-l~--~- 246 (380)
T 2o4c_A 177 LNRDGEHPTRHLLDEPRLAALR----PGTWLVNASRGAVVDNQALRRLLE--GGADLEVALDVWEGEPQADPE-LA--A- 246 (380)
T ss_dssp CCSSSSSCCTTSBCHHHHHTSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCCEEEEESCCTTTTSCCHH-HH--T-
T ss_pred CccccccchhhhcCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCCceEEeeeeccCCCCchh-hc--c-
Confidence 1 34789999999993 466777777533322222223333 565443321111100011111 12 1
Q ss_pred cccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCCC-CCCCccccC
Q 007939 490 NNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEE-IPKGILYPS 539 (584)
Q Consensus 490 NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v~~~~-~~~g~l~P~ 539 (584)
+|+.+-|=++-....+ -..|...+++.+.....-+. ..-..++|.
T Consensus 247 ~nvi~TPHiag~t~e~-----~~~~~~~~~~nl~~~l~g~~~~~~~~~~p~ 292 (380)
T 2o4c_A 247 RCLIATPHIAGYSLEG-----KLRGTAQIYQAYCAWRGIAERVSLQDVLPE 292 (380)
T ss_dssp TCSEECSSCTTCCHHH-----HHHHHHHHHHHHHHHHTCCCCCCGGGTCCC
T ss_pred CCEEEccccCcCCHHH-----HHHHHHHHHHHHHHHHcCCCccchhhcCCC
Confidence 4788888775221111 23455556666666554332 222345554
No 40
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.57 E-value=0.19 Score=50.94 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHCCCe-eeEeccCCCChHHHHHHHHhhc------c-CccccC--cchhHHHHHHHHHHHHHHhCCCCCCC
Q 007939 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGTVRAQGLSLTDF 321 (584)
Q Consensus 252 vdefv~av~~~~P~~-lIqfEDf~~~nAf~lL~ryr~~------~-~~FNDD--iQGTaaV~LAgll~Alr~~g~~l~dl 321 (584)
+.+|++.++. +++ .++..-=-...++++|++.-.. + ++.++| ..|.-.= -.|++.+|+..|.+++.
T Consensus 47 l~~~v~~l~~--~~~~G~nVTiP~K~~v~~~ld~ls~~A~~iGAVNTv~~~~g~l~G~NTD-~~G~~~~L~~~~~~~~~- 122 (282)
T 3fbt_A 47 LKESVDTFKI--IKCGGLNVTIPYKVEVMKELYEISEKARKIGAVNTLKFSREGISGFNTD-YIGFGKMLSKFRVEIKN- 122 (282)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTGGGGGCSEECHHHHHHTCCCEEEECSSCEEEECCH-HHHHHHHHHHTTCCCTT-
T ss_pred HHHHHHHHhc--CCCCEEEEcCCCHHHHHHHHHhcCHHHHHcCCcceEEeeCCEEEeeCCc-HHHHHHHHHHcCCCccC-
Confidence 5566666654 332 3333332334556555554221 1 222222 2232111 26889999988888888
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 123 --k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 123 --NICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp --SEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred --CEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999888777766655 354 579999874
No 41
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.44 E-value=0.21 Score=50.32 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHCCCe-eeEeccCCCChHHHHHHHHhhc------c-Ccccc-C--cchhHHHHHHHHHHHHHHhCCCCCC
Q 007939 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFND-D--IQGTAGVALAGLLGTVRAQGLSLTD 320 (584)
Q Consensus 252 vdefv~av~~~~P~~-lIqfEDf~~~nAf~lL~ryr~~------~-~~FND-D--iQGTaaV~LAgll~Alr~~g~~l~d 320 (584)
+++|++.++. +++ .++..-=-...++++|++.-+. + ++.++ | ..|.-.= -.|++.+++..+..++.
T Consensus 51 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~~ 127 (283)
T 3jyo_A 51 LKTLLDAALY--LGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAKL 127 (283)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHhh--CCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcCC
Confidence 5667766654 232 3433333334455555543321 1 33443 3 2332211 35788889888888888
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCC-cccCCC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG-LREGAS 399 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~-~~~~~~ 399 (584)
.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+........- .....+
T Consensus 128 ---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~--a~~la~~~~~~~~~~~i~~~~~~~ 187 (283)
T 3jyo_A 128 ---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR--AQALADVINNAVGREAVVGVDARG 187 (283)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH--HHHHHHHHHHHHTSCCEEEECSTT
T ss_pred ---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH--HHHHHHHHHhhcCCceEEEcCHHH
Confidence 999999999666666555544 454 579988874 111 11111112111000000 001246
Q ss_pred HHHHhcccCCcEEEeecCC
Q 007939 400 LLEVVRKVKPHVLLGLSGV 418 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~ 418 (584)
|.++++. +|++|-++..
T Consensus 188 l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 188 IEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp HHHHHHH--SSEEEECSST
T ss_pred HHHHHhc--CCEEEECCCC
Confidence 8888887 8999977653
No 42
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.41 E-value=0.38 Score=49.70 Aligned_cols=100 Identities=23% Similarity=0.321 Sum_probs=61.4
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
+...+++|+|||.+|.+++..+... |. +++++|+.- + .+...+..++....... ....++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~~----~--r~~~~~~~~~~~~~~~~--~~~~~~ 224 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDINV----E--RLSYLETLFGSRVELLY--SNSAEI 224 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHHGGGSEEEE--CCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHHHHHhhCceeEeee--CCHHHH
Confidence 4448999999999999888877553 42 688888741 1 12222222222100000 011346
Q ss_pred HHHhcccCCcEEEeecCCCCC-----CCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVGGV-----FNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g~-----Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
.+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 225 ~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~----~g~~ivdv~~~ 269 (361)
T 1pjc_A 225 ETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR----TGSVIVDVAVD 269 (361)
T ss_dssp HHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC----TTCEEEETTCT
T ss_pred HHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC----CCCEEEEEecC
Confidence 777765 8999998876553 5888888883 35577777753
No 43
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.40 E-value=1.3 Score=46.50 Aligned_cols=103 Identities=23% Similarity=0.355 Sum_probs=60.2
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
++.. .+++|+|+|..|..++..+... |. ++|+++|+.. .+ . ..+|+.... . .-.
T Consensus 164 ~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~~----~r--a----~~la~~~g~-~-~~~ 217 (404)
T 1gpj_A 164 SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRTY----ER--A----VELARDLGG-E-AVR 217 (404)
T ss_dssp CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSSH----HH--H----HHHHHHHTC-E-ECC
T ss_pred cccC---CEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCCH----HH--H----HHHHHHcCC-c-eec
Confidence 3455 8999999999998888877653 54 4799888731 11 0 123321100 0 001
Q ss_pred CCCHHHHhcccCCcEEEeecCCC-CCCCHHHHHH--hhhcCCCCCeEEecCCCC
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKA--MRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~-g~Fteevv~~--M~~~~~erPIIFaLSNPt 447 (584)
..++.++++. .|++|-+++.+ ..++++.++. |..+...+-+++-++.|.
T Consensus 218 ~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 218 FDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp GGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred HHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 2358888865 89999776544 3467788887 421112233555555543
No 44
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=91.35 E-value=3.5 Score=44.63 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=117.7
Q ss_pred ChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHH--HHHHHHhh---c--cCcccc----------CcchhHHHHHH
Q 007939 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYRK---R--FCMFND----------DIQGTAGVALA 305 (584)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf--~lL~ryr~---~--~~~FND----------DiQGTaaV~LA 305 (584)
+..|-..|-..||..+.+.. |+.-|-=+|++..-.. -+.+.|++ . .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34567777778888886655 8888889999876221 13445543 1 122211 22346666666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCC-Chhh---
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 381 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l-~~~k--- 381 (584)
++-.+++..|.+++. .||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 778888889988888 9999999999999999888664 32 2344799999988753 35 3221
Q ss_pred -hcccccc-CCcCCc-----ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 382 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 382 -~~fA~~~-~~~~~~-----~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
..+.+.. ..|.+. ....+-.+. -.++.|+|+=+.. ++..|++-.+.+.+ |...||.-=+| |++
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a--~g~kiV~EgAN~p~T 351 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA--NNVKYYIEVANMPTT 351 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhccCCChhhcccccCCEEeCchhh-hcCCcceeecccc-ccccchhhHHHHHh--cCCeEEEeCCCCcCC
Confidence 0111000 001000 000000112 2578999998774 79999999999953 45679998888 654
No 45
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.30 E-value=0.22 Score=51.16 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-.|++.+++..+.+++. .+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35688888888888888 999999999666666555543 454 579999885
No 46
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.24 E-value=0.84 Score=49.82 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=75.0
Q ss_pred HHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCc
Q 007939 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (584)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~ 391 (584)
|.++..+.. .+|+|+|+|..|.++|+.+... |. +++.+|+. +.+...|+..
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~--- 316 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMME--- 316 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHT---
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHc---
Confidence 345656667 9999999999999998877653 42 68888873 2222223221
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007939 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (584)
Q Consensus 392 ~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~ 459 (584)
| .+..++.|+++. .|++|=+++..+.++++.++.|. +.-+|.-.+.... |+..+..+.
T Consensus 317 -G-a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk----~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 317 -G-FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK----DHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp -T-CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC----TTCEEEECSSSGG--GBCHHHHHH
T ss_pred -C-CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC----CCcEEEEeCCCCC--ccCHHHHHH
Confidence 0 012468888876 89999888878899999999994 4567777777543 666655443
No 47
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=91.22 E-value=0.22 Score=51.17 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.|++.+++..+.++++ .+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 4578888888888888 999999999776666665544 454 579999884
No 48
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=91.09 E-value=0.44 Score=52.07 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCC
Q 007939 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 377 (584)
Q Consensus 298 GTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l 377 (584)
|+......|+ .+.+|..+.. .+++|+|.|..|.++|+.+... |. +++.+|+...
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~-------- 311 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI-------- 311 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH--------
T ss_pred hhhhhhhhhh---hhccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH--------
Confidence 3333344552 3567888888 9999999999999999988653 42 6888887521
Q ss_pred ChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 378 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 378 ~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
... ...... ....+|.|+++. .|+++......+.++++.++.|. +.-||.=.+....
T Consensus 312 -~~~-~a~~~G------~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gAilINvgrg~v 368 (494)
T 3d64_A 312 -CAL-QAAMEG------YRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR----HNAIVCNIGHFDS 368 (494)
T ss_dssp -HHH-HHHTTT------CEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC----TTEEEEECSSSSC
T ss_pred -hHH-HHHHcC------CEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC----CCcEEEEcCCCcc
Confidence 000 000110 012479999987 99999987778999999999993 4668887777544
No 49
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=91.01 E-value=1.5 Score=48.14 Aligned_cols=185 Identities=18% Similarity=0.271 Sum_probs=116.2
Q ss_pred CCChhhhhHhHHHHHHHHHHH-C--CCeeeEeccCCCChH--HHHHHHHhhcc---------CccccCc---------ch
Q 007939 242 RLEGEEYLSIVDEFMEAVHAR-W--PKAIVQFEDFQMKWA--FETLERYRKRF---------CMFNDDI---------QG 298 (584)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~-~--P~~lIqfEDf~~~nA--f~lL~ryr~~~---------~~FNDDi---------QG 298 (584)
..+..|-..|...||+.+.++ + |...|-=+|++..-. --+.+.|+... |+--.-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 346678888999999999862 4 888888899987532 12677886432 1111111 23
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 299 TAGVALAGLLG------TVRAQGL--SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 299 TaaV~LAgll~------Alr~~g~--~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
||-=+.-++-. +++..|. .|+. .||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 44444444443 3445675 3667 9999999999999999988763 43 345689999999
Q ss_pred ccCCCCCChhhh-ccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007939 371 TKERKNLDPAAA-PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (584)
Q Consensus 371 ~~~r~~l~~~k~-~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt 447 (584)
++.. +|+..+. .+........+.+....+.+.+-.++.||||=+.. .+..|++-++.+ ...||.--+| |+
T Consensus 281 yd~~-Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~-~n~I~~~na~~l-----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 281 WNPD-GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAAS-EKQLTKSNAPRV-----KAKIIAEGANGPT 352 (501)
T ss_dssp ECTT-CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSS-SCCBCTTTGGGC-----CCSEEECCSSSCB
T ss_pred ECCC-CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeeccc-cCccCHhHHHHc-----CceEEEeCCCCcC
Confidence 9754 3443321 11111100000000000111245678999998887 499999998887 3689999999 54
No 50
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=90.86 E-value=0.72 Score=49.50 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=116.0
Q ss_pred ChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHHH---HHHHHhhc-----cCccccC----------cchhHHHHH
Q 007939 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRKR-----FCMFNDD----------IQGTAGVAL 304 (584)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf~---lL~ryr~~-----~~~FNDD----------iQGTaaV~L 304 (584)
+.+|-..|...|+.++.+.- |+..|-=+|++.. +.. +.+.|+.. ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 45667788999999999887 8888888999873 222 34566431 1222221 123665666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEE-EEecCcccccCCCCCChhh-h
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLi~~~r~~l~~~k-~ 382 (584)
-++-.+++..|.+++. .+|+|.|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+... +
T Consensus 195 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~-GlD~~~l~ 258 (421)
T 1v9l_A 195 VATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKE-GLNVELIQ 258 (421)
T ss_dssp HHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTT-CCCTHHHH
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCC-CCCHHHHH
Confidence 6777888889998888 9999999999999999877553 42 455 999999988754 232221 1
Q ss_pred ccccccCC--cCCc------ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 383 PFAKDPGD--FMGL------REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 383 ~fA~~~~~--~~~~------~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
.+...... |.+. ....+-.| +-.++.|+|+=+.. ++..|++-++.+ ...||.--+| |++
T Consensus 259 ~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l-----~ak~V~EgAN~p~t 326 (421)
T 1v9l_A 259 KNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV-----KARLVVEGANGPTT 326 (421)
T ss_dssp HTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC-----CCSEEECCSSSCBC
T ss_pred HHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc-----CceEEEecCCCcCC
Confidence 11111000 0000 00001122 34578999997774 788898887776 4678888888 653
No 51
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=90.82 E-value=0.25 Score=49.70 Aligned_cols=47 Identities=26% Similarity=0.501 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
|++.+++..|.+++. .|+|++|||-|+.+|+-.|.+ .|. ++|+++++
T Consensus 111 Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 111 GFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 477888888988888 999999999998888766654 454 57999987
No 52
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=90.79 E-value=0.22 Score=50.28 Aligned_cols=99 Identities=23% Similarity=0.230 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHCCCe-eeEeccCCCChHHHHHHHHhhc------c--CccccC--cchhHHHHHHHHHHHHHHhCCCCCC
Q 007939 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F--CMFNDD--IQGTAGVALAGLLGTVRAQGLSLTD 320 (584)
Q Consensus 252 vdefv~av~~~~P~~-lIqfEDf~~~nAf~lL~ryr~~------~--~~FNDD--iQGTaaV~LAgll~Alr~~g~~l~d 320 (584)
++++++.++. +++ .++..-=-...++++|++.-+. + .+|++| ..|.-.= -.|++.+++..|.+++.
T Consensus 50 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~ 126 (281)
T 3o8q_A 50 FTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKG 126 (281)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccC
Confidence 5666666653 232 5544444445566666654322 1 234444 2332111 35788888888888888
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 127 ---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 127 ---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999776666655543 454 479999884
No 53
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.68 E-value=1.2 Score=47.49 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=78.3
Q ss_pred ChhhhhHhHHHHHHHHHHHC-CCeeeEeccCCCChHHH---HHHHHhh---cc-C---ccccC----------cchhHHH
Q 007939 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRK---RF-C---MFNDD----------IQGTAGV 302 (584)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~lIqfEDf~~~nAf~---lL~ryr~---~~-~---~FNDD----------iQGTaaV 302 (584)
+.+|-..|...|++++.+.- |+..|-=+|++.. +.. +.+.|.+ .. + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 45677788899999998877 8887888999874 222 3355533 21 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-CCCCCCceEEEeCcchhhHHHHHHHHH-HHHHHcCCChhhhcCcEEEE-ecCcccc
Q 007939 303 ALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQ-AAARMAGNNDAFARNKFFLL-DKDGLIT 371 (584)
Q Consensus 303 ~LAgll~Alr~~g~~-l~dl~~~riv~~GAGsAg~GiA~li~~-~~~~~~Gls~eeA~~~i~lv-Ds~GLi~ 371 (584)
+.-++..+++..|.+ |+. .++.|+|.|..|..+|+++.. . |+ +++.+ |+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~~~-----G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSEDF-----GM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHHhc-----CC-------EEEEEeCCCcccc
Confidence 666788888989988 888 999999999999999988765 3 43 45544 8876443
No 54
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.22 E-value=1.1 Score=44.19 Aligned_cols=85 Identities=21% Similarity=0.250 Sum_probs=56.8
Q ss_pred eeEeccCCCChHHHHHHHHhhc-c----CccccCcchhHHHHHHHHHHHHHHh-CCCCCCCCCceEEEeC-cchhhHHHH
Q 007939 267 IVQFEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGVL 339 (584)
Q Consensus 267 lIqfEDf~~~nAf~lL~ryr~~-~----~~FNDDiQGTaaV~LAgll~Alr~~-g~~l~dl~~~riv~~G-AGsAg~GiA 339 (584)
.+.++-+.-..+.+++++-+.. + .+...|..|.- ..-.|++.+++.. +.+++. .+++|.| +|.+|..++
T Consensus 61 ~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~aia 136 (287)
T 1lu9_A 61 AIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRSA 136 (287)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHHH
T ss_pred eEEEccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHHH
Confidence 4445655556888888887753 1 22234555532 2356677788776 777777 9999999 888887777
Q ss_pred HHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 340 KMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 340 ~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..+.+ .|. +++++|++
T Consensus 137 ~~L~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 137 ALLAG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HHHHH-----TTC-------EEEEEESS
T ss_pred HHHHH-----CcC-------EEEEEECC
Confidence 77654 342 48888874
No 55
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.04 E-value=0.24 Score=49.96 Aligned_cols=49 Identities=16% Similarity=0.410 Sum_probs=37.7
Q ss_pred HHHHHHHHHhC-CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 305 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 305 Agll~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.|++.+++..+ ..++. .+++|+|||.+|..+|..|.. .|. ++|+++|+.
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~ 174 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT 174 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 67888888777 67777 999999999887777766654 354 479988874
No 56
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.91 E-value=0.23 Score=49.93 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHCCCe-eeEeccCCCChHHHHHHHHhhc------c-CccccC--cchhHHHHHHHHHHH-HHHhCCCCCC
Q 007939 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGT-VRAQGLSLTD 320 (584)
Q Consensus 252 vdefv~av~~~~P~~-lIqfEDf~~~nAf~lL~ryr~~------~-~~FNDD--iQGTaaV~LAgll~A-lr~~g~~l~d 320 (584)
++++++.++. +++ .++..-=-...++++|++.-+. + ++.++| ..|.-.= ..|++.+ ++..|.+++.
T Consensus 44 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~ 120 (272)
T 3pwz_A 44 FEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRN 120 (272)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTT
T ss_pred HHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccC
Confidence 5666666654 333 5555554445666666654321 1 223333 3442222 3578888 8777878888
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 121 ---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 121 ---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999666666655544 454 479988874
No 57
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.83 E-value=3.5 Score=41.86 Aligned_cols=163 Identities=17% Similarity=0.154 Sum_probs=101.0
Q ss_pred HHCCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh----------------CCCCC
Q 007939 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ----------------GLSLT 319 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~----------------g~~l~ 319 (584)
...|+. .|+.--.+..|- . ++..+ ..+.+.|--- +.+|=-+++.+|+..|.. +..+.
T Consensus 64 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~ 141 (313)
T 2ekl_A 64 EKGKKLKIIARAGIGLDNI-D-TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELA 141 (313)
T ss_dssp HHCTTCCEEEECSSCCTTB-C-HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCT
T ss_pred hhCCCCeEEEEcCCCCCcc-C-HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCC
Confidence 346776 777777766663 2 23333 3477777543 334445899999988752 34445
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
. .+|.|+|.|..|..+|+.+... |. +++.+|+.. ... .+... + ....+
T Consensus 142 g---~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~~---~~~~~----g-~~~~~ 189 (313)
T 2ekl_A 142 G---KTIGIVGFGRIGTKVGIIANAM-----GM-------KVLAYDILD---------IRE---KAEKI----N-AKAVS 189 (313)
T ss_dssp T---CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHH---HHHHT----T-CEECC
T ss_pred C---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chh---HHHhc----C-ceecC
Confidence 5 9999999999999999988653 43 688888741 111 11110 0 01247
Q ss_pred HHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007939 400 LLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 465 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Gra 465 (584)
+.|+++. .|+++=.-- ..+.++++.++.|. +..++.-.|.-..--|..-.+|.+ +|+.
T Consensus 190 l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i 251 (313)
T 2ekl_A 190 LEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK----DNVIIVNTSRAVAVNGKALLDYIK--KGKV 251 (313)
T ss_dssp HHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC----TTEEEEESSCGGGBCHHHHHHHHH--TTCE
T ss_pred HHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC----CCCEEEECCCCcccCHHHHHHHHH--cCCC
Confidence 8999987 898874421 24778899999993 466888787743322322334443 5554
No 58
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.83 E-value=0.49 Score=51.07 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=64.3
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
+..+|.|+|+|..|..+|..|.+. |. +++++|+.- +... .+...... .+.....++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~~------~~~~----~l~~~~~~-~gi~~~~s~~ 70 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRSR------EKTE----EVIAENPG-KKLVPYYTVK 70 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSH------HHHH----HHHHHSTT-SCEEECSSHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCCH------HHHH----HHHhhCCC-CCeEEeCCHH
Confidence 348999999999999999988653 53 578887631 0111 12111000 0111235788
Q ss_pred HHhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 402 EVVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 402 evV~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
|+++.. ++|++| ++..++...+++++.+.....+.-||.-+||-.+
T Consensus 71 e~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 71 EFVESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp HHHHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHHhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 888753 478776 4544556778888887553445668888998664
No 59
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.72 E-value=0.29 Score=50.18 Aligned_cols=126 Identities=13% Similarity=0.164 Sum_probs=73.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|.++|.++... |+- +++|+|.+-=..+. ..++.+...++..+ .. .....++.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~~~~~~~~~~~l~~~~~~~~~~-~~---i~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVVKGMPEGKALDLSHVTSVVDTN-VS---VRAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHHHHHTTCC-CC---EEEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECChhHHHHHHHHHHhhhhccCCC-CE---EEEeCCHHH
Confidence 5899999999999999888763 441 39999985210000 00111111111111 00 112367988
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--
Q 007939 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~---g~----------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT-- 461 (584)
+++. .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+-.|||..- +.+-+.+.+
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNP~~~---~t~~~~~~~~~ 148 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK-YCPKTFIIVVTNPLDC---MVKVMCEASGV 148 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCC
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCchHH---HHHHHHHhcCC
Confidence 9988 89888554333 33 13677888854 7888888888999873 234444443
Q ss_pred CCcEEEEeC
Q 007939 462 GENIVFASG 470 (584)
Q Consensus 462 ~Grai~AsG 470 (584)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 222355665
No 60
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=89.46 E-value=0.25 Score=53.49 Aligned_cols=46 Identities=22% Similarity=0.254 Sum_probs=32.2
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCC
Q 007939 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPF 473 (584)
Q Consensus 424 eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf 473 (584)
.++++.|. ++|+.-+++=.|||.. -+| +-+.++++=|+|=-+-||+
T Consensus 140 ~~i~~~i~-~~~P~A~~in~tNP~~--i~t-~a~~~~~~~k~vGlC~~~~ 185 (477)
T 3u95_A 140 LEIAEKMK-KMAPKAYLMQTANPVF--EIT-QAVRRWTGANIIGFCHGVA 185 (477)
T ss_dssp HHHHHHHH-HHCTTCEEEECSSCHH--HHH-HHHHHHHCCCEEEECCGGG
T ss_pred HHHHHHHH-hhCCCeEEEEecChHH--HHH-HHHHHhCCCCeEEECCCHH
Confidence 58999995 4999999999999985 333 3345666556554444443
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.39 E-value=3.3 Score=44.25 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred CCCe-eeEeccCCCChHHHHHHHHhh-ccCccccCc---chhHHHHHHHHHHHHHHh---------C---C---CCCCCC
Q 007939 263 WPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G---L---SLTDFA 322 (584)
Q Consensus 263 ~P~~-lIqfEDf~~~nAf~lL~ryr~-~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g---~---~l~dl~ 322 (584)
.|+. .|+.-=.+..| ..+ +..++ -+++||--- ..+|=-++|.+|+..|.. | + .-.+|.
T Consensus 78 ~p~Lk~I~~~~~G~d~-IDl-~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~ 155 (416)
T 3k5p_A 78 ANRLIAVGCFSVGTNQ-VEL-KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVR 155 (416)
T ss_dssp CTTCCEEEECSSCCTT-BCH-HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCST
T ss_pred CCCcEEEEECccccCc-cCH-HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCC
Confidence 4554 55544444433 223 33333 488888643 345666788888888641 1 0 013455
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
+.++.|+|.|..|..+|+.+..+ |+ +++.+|+.. ..... -+ ....+|.|
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~yd~~~-------~~~~~---~~---------~~~~sl~e 204 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-----GM-------TVRYYDTSD-------KLQYG---NV---------KPAASLDE 204 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTTC-------CCCBT---TB---------EECSSHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCcc-------hhccc---Cc---------EecCCHHH
Confidence 59999999999999999987654 44 688899741 11100 01 12357999
Q ss_pred HhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCC-CCccc
Q 007939 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVD 477 (584)
Q Consensus 403 vV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSP-f~pv~ 477 (584)
+++. .|+++=.- ...+.|+++.+..|. +..++.=.|.=..--|---.+|++ +|+.- +.|.. |++-.
T Consensus 205 ll~~--aDvV~lhvPlt~~T~~li~~~~l~~mk----~gailIN~aRG~vvd~~aL~~aL~--~g~i~-gAalDVf~~EP 275 (416)
T 3k5p_A 205 LLKT--SDVVSLHVPSSKSTSKLITEAKLRKMK----KGAFLINNARGSDVDLEALAKVLQ--EGHLA-GAAIDVFPVEP 275 (416)
T ss_dssp HHHH--CSEEEECCCC-----CCBCHHHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEE-EEEECCCSSCC
T ss_pred HHhh--CCEEEEeCCCCHHHhhhcCHHHHhhCC----CCcEEEECCCChhhhHHHHHHHHH--cCCcc-EEEeCCCCCCC
Confidence 9988 89887432 123789999999993 577888888766533444445554 67644 22322 32211
Q ss_pred cCCCee--eeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007939 478 LGNGKI--GHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (584)
Q Consensus 478 ~~~G~~--~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v 526 (584)
...+.. ..--+..|+.+-|=+|-....+ -+.|...+++.|.+..
T Consensus 276 ~~~~~~~~~pL~~~~nvilTPHig~~T~ea-----~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 276 ASNGERFSTPLQGLENVILTPHIGGSTEEA-----QERIGTEVTRKLVEYS 321 (416)
T ss_dssp SSTTSCCCCTTTTCTTEEECCSCTTCCHHH-----HHHHHHHHHHHHHHHH
T ss_pred CCcccccchhHhcCCCEEECCCCCCCCHHH-----HHHHHHHHHHHHHHHH
Confidence 110100 0112456899999876432222 2455666677666655
No 62
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.35 E-value=0.49 Score=45.81 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=60.8
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc--ccCC-CCCCh-hhhccccccCCcCCcccC
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI--TKER-KNLDP-AAAPFAKDPGDFMGLREG 397 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi--~~~r-~~l~~-~k~~fA~~~~~~~~~~~~ 397 (584)
...||.|+|+|..|..+|..+... | .+++++|++--- .+.. ..+.. ....++..... ...
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 81 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VHL 81 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTT----CEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----eec
Confidence 339999999999999999888763 4 268888875211 0000 00000 01122221110 123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh-hhcCCCCCeEEecCCCC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM-RESDSVKPAIFAMSNPT 447 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M-~~~~~erPIIFaLSNPt 447 (584)
.++.|+++. +|++| ++. +.....++++.+ +... +..||.-+|||.
T Consensus 82 ~~~~e~~~~--aDvVi-lav-p~~~~~~~~~~i~~~~l-~g~ivi~~s~~~ 127 (245)
T 3dtt_A 82 AAFADVAAG--AELVV-NAT-EGASSIAALTAAGAENL-AGKILVDIANPL 127 (245)
T ss_dssp EEHHHHHHH--CSEEE-ECS-CGGGHHHHHHHHCHHHH-TTSEEEECCCCE
T ss_pred cCHHHHHhc--CCEEE-Ecc-CcHHHHHHHHHhhhhhc-CCCEEEECCCCC
Confidence 679999987 88877 443 333335666655 3322 567999999974
No 63
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=89.20 E-value=1.6 Score=46.18 Aligned_cols=129 Identities=17% Similarity=0.198 Sum_probs=88.8
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCC
Q 007939 297 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 376 (584)
Q Consensus 297 QGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~ 376 (584)
+.+|=-+++.+|+..|..|..|.+ .++.|+|.|..|..+|+.+... |+ +++.+|+.. .
T Consensus 96 ~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~----~--- 153 (381)
T 3oet_A 96 IAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDPPR----A--- 153 (381)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHHH----H---
T ss_pred chhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCh----H---
Confidence 345556899999999999988888 9999999999999999998764 44 588888731 0
Q ss_pred CChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC--------CCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 377 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG--------VGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 377 l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~--------~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
... .. ....+|.|+++. .|+++=.-- ..+.|+++.+..|. +..|+.=.|.-..
T Consensus 154 ----~~~---~~------~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk----~gailIN~aRG~v 214 (381)
T 3oet_A 154 ----ARG---DE------GDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK----PGAILINACRGPV 214 (381)
T ss_dssp ----HTT---CC------SCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC----TTEEEEECSCGGG
T ss_pred ----Hhc---cC------cccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC----CCcEEEECCCCcc
Confidence 000 00 123579999988 898874321 35789999999994 5778887776544
Q ss_pred ccCCCHHHHhcccCCcEEEE
Q 007939 449 NAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 449 ~aE~tpeda~~wT~Grai~A 468 (584)
--|-.-.+|++ +|+...|
T Consensus 215 vde~aL~~aL~--~g~i~gA 232 (381)
T 3oet_A 215 VDNAALLARLN--AGQPLSV 232 (381)
T ss_dssp BCHHHHHHHHH--TTCCEEE
T ss_pred cCHHHHHHHHH--hCCCeEE
Confidence 22333334444 5654443
No 64
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.05 E-value=0.23 Score=50.69 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=32.6
Q ss_pred CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 316 LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 316 ~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++|++ .||+|+|+|..|.-+|..|+.+.+ .+|.++|.+
T Consensus 32 ~kL~~---~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRT---FAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYD 69 (292)
T ss_dssp CGGGG---CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred HHHhC---CeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCC
Confidence 34555 999999999999999999988744 689999987
No 65
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.97 E-value=1.3 Score=45.76 Aligned_cols=100 Identities=21% Similarity=0.335 Sum_probs=58.4
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
+...+++|+|+|..|..+|+.+... |. +++++|++- + .+...+..+..... .. .....++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~--~~~~~~~~~g~~~~-~~-~~~~~~l 223 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----K--RLQYLDDVFGGRVI-TL-TATEANI 223 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSEE-EE-ECCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----H--HHHHHHHhcCceEE-Ee-cCCHHHH
Confidence 4459999999999998888877653 42 688888741 0 11111111111000 00 0012457
Q ss_pred HHHhcccCCcEEEeecCCCC-----CCCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVGG-----VFNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g-----~Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk----~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK----EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC----TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc----CCCEEEEEecC
Confidence 888876 899998876543 46899999993 34566666643
No 66
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.90 E-value=1 Score=46.78 Aligned_cols=95 Identities=18% Similarity=0.285 Sum_probs=61.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|.|..|..+|..|... | -+++++|+.- +....++... .....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~~----------~~~~~l~~~g-----~~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLNV----------NAVQALEREG-----IAGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH----------HHHHHHHTTT-----CBCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCCH----------HHHHHHHHCC-----CEEeCCHHHH
Confidence 7999999999999999888763 4 2578888631 1111222211 1123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
++.. +||++| ++...+ -.+++++.+.....+.-||.-+||-.
T Consensus 76 ~~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 76 CAKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred HhcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 8774 568776 333334 67888888765455677888888754
No 67
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.64 E-value=0.35 Score=47.89 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-.|++.+++..|..++. .+++|+|||.+|.++|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888888887777 999999999888777776654 34 369988884
No 68
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.25 E-value=0.44 Score=47.25 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHCCCe---------eeEeccCCCChHHHHHHHHhhcc---CccccCcchhHHHHHHHHHHHHHHhCCCCC
Q 007939 252 VDEFMEAVHARWPKA---------IVQFEDFQMKWAFETLERYRKRF---CMFNDDIQGTAGVALAGLLGTVRAQGLSLT 319 (584)
Q Consensus 252 vdefv~av~~~~P~~---------lIqfEDf~~~nAf~lL~ryr~~~---~~FNDDiQGTaaV~LAgll~Alr~~g~~l~ 319 (584)
+++|++.++.-|-.+ .+.+=|- ++.|..+ --=|++ .=+|-|-. |++.+++..
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~i--GAvNTi~~~~G~NTD~~--------G~~~~l~~~----- 105 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRI--KAVNCVFRGKGYNTDWV--------GVVKSLEGV----- 105 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHH--TCCCEEETTEEECCHHH--------HHHHHTTTC-----
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHc--CcceEeecCEEEcchHH--------HHHHHHHhc-----
Confidence 667777766334222 4455555 5555544 000111 23444433 577777543
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
++.+ +++|+|||.+|.+++..|.. .|. ++|+++|+. .++ -+.+++.-.. ....+
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~k------a~~la~~~~~----~~~~~ 159 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IER------AKALDFPVKI----FSLDQ 159 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHH------HHTCCSSCEE----EEGGG
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHH------HHHHHHHccc----CCHHH
Confidence 3456 99999999888888776655 354 579999984 111 1122221100 01245
Q ss_pred HHHHhcccCCcEEEeecC
Q 007939 400 LLEVVRKVKPHVLLGLSG 417 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~ 417 (584)
+.++++. +|++|-++.
T Consensus 160 ~~~~~~~--aDiVInatp 175 (253)
T 3u62_A 160 LDEVVKK--AKSLFNTTS 175 (253)
T ss_dssp HHHHHHT--CSEEEECSS
T ss_pred HHhhhcC--CCEEEECCC
Confidence 7888877 899996553
No 69
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.18 E-value=0.53 Score=46.52 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-.|++.+++..|.+++. .+++|+|||.+|..+|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56778888888888877 999999998777776666544 34 268888874
No 70
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.99 E-value=4 Score=41.54 Aligned_cols=146 Identities=17% Similarity=0.220 Sum_probs=90.8
Q ss_pred CCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh---------CC-----C----CCC
Q 007939 264 PKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-----S----LTD 320 (584)
Q Consensus 264 P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~-----~----l~d 320 (584)
|+. .|+.-..+..|- . ++..+ ..+.+.|--- +.+|=-+++.+|+..|.. |. + -.+
T Consensus 75 ~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~ 152 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHL-A-LDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYG 152 (330)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCC
T ss_pred CCceEEEECCcccccc-c-HHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcC
Confidence 676 788777777763 2 23333 3477777643 344555799999988732 11 0 034
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
|.+.+|.|+|.|..|..+|+.+... |. +++.+|+..- .....+ .+ . . ...++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~~------~~~~~~-~~---g-----~-~~~~l 204 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPF-----GV-------QRFLYTGRQP------RPEEAA-EF---Q-----A-EFVST 204 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG-----TC-------CEEEEESSSC------CHHHHH-TT---T-----C-EECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCCc------chhHHH-hc---C-----c-eeCCH
Confidence 5569999999999999999887543 43 5888987411 111110 00 0 0 11278
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
.|+++. .|+++=.-. ..+.+++++++.|. +..++.-.|+
T Consensus 205 ~e~l~~--aDvVi~~vp~~~~t~~~i~~~~~~~mk----~gailIn~sr 247 (330)
T 2gcg_A 205 PELAAQ--SDFIVVACSLTPATEGLCNKDFFQKMK----ETAVFINISR 247 (330)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBSHHHHHHSC----TTCEEEECSC
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 898887 898774321 23678888888883 4567766665
No 71
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.92 E-value=0.82 Score=47.92 Aligned_cols=160 Identities=14% Similarity=0.158 Sum_probs=95.3
Q ss_pred hHhHHHHHHHHHHHCCCeeeEeccCCCChHHHHHHHHhhcc-CccccC---------cchhHHHHHHHHHHHHHHh-CC-
Q 007939 249 LSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRF-CMFNDD---------IQGTAGVALAGLLGTVRAQ-GL- 316 (584)
Q Consensus 249 ~~~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ryr~~~-~~FNDD---------iQGTaaV~LAgll~Alr~~-g~- 316 (584)
++++..|.+++..+.-. .|-=+|++..- +.+...-+++ ++---- ..-||--+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~-~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~ 169 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR-YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSD 169 (364)
T ss_dssp HHHHHHHHHHHHTTTTS-EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCc-eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcccc
Confidence 45667777777777622 45667887543 3455555554 221111 1235555555666666664 75
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
+|+. .+|+|.|+|..|..+|+.+.+. |. ++++.|++ .+.+.++...| ...
T Consensus 170 ~L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~~~l~~~a~~~---ga~------ 219 (364)
T 1leh_A 170 SLEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------KAAVSAAVAEE---GAD------ 219 (364)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------HHHHHHHHHHH---CCE------
T ss_pred CCCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------HHHHHHHHHHc---CCE------
Confidence 6777 9999999999999999988664 43 47788852 11122222222 000
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN-Pt~ 448 (584)
..++.++. ..+.|++|=++ ..+.++++.++.| ...+|.--+| |+.
T Consensus 220 ~v~~~~ll-~~~~DIvip~a-~~~~I~~~~~~~l-----g~~iV~e~An~p~t 265 (364)
T 1leh_A 220 AVAPNAIY-GVTCDIFAPCA-LGAVLNDFTIPQL-----KAKVIAGSADNQLK 265 (364)
T ss_dssp ECCGGGTT-TCCCSEEEECS-CSCCBSTTHHHHC-----CCSEECCSCSCCBS
T ss_pred EEChHHHh-ccCCcEeeccc-hHHHhCHHHHHhC-----CCcEEEeCCCCCcc
Confidence 11222322 25789999654 5789999988887 2467776777 543
No 72
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.65 E-value=1.4 Score=42.33 Aligned_cols=123 Identities=16% Similarity=0.203 Sum_probs=69.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCC-ChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gl-s~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|..|..+|..+... |. .. ++++++|++ . +.+ +.+++... .....++.|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~~~----~~V~~~~r~----~--~~~----~~~~~~~g----~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIVSS----NQIICSDLN----T--ANL----KNASEKYG----LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSSCG----GGEEEECSC----H--HHH----HHHHHHHC----CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCCCC----CeEEEEeCC----H--HHH----HHHHHHhC----CEEeCChHH
Confidence 5899999999999999887653 43 21 368888873 0 111 12221100 112357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc-CCcEEEEeCCCCCccccC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-GENIVFASGSPFENVDLG 479 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT-~Grai~AsGSPf~pv~~~ 479 (584)
+++. +|++| ++. +..-.+++++.+.....+..+|...++-.+. +..-++. .+..++ ..-|+.|+...
T Consensus 60 ~~~~--aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~-----~~l~~~~~~~~~~v-~~~p~~p~~~~ 127 (247)
T 3gt0_A 60 VAKN--ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKSI-----ESTENAFNKKVKVV-RVMPNTPALVG 127 (247)
T ss_dssp HHHH--CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSCH-----HHHHHHHCSCCEEE-EEECCGGGGGT
T ss_pred HHHh--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCCH-----HHHHHHhCCCCcEE-EEeCChHHHHc
Confidence 9987 88877 443 3445677887775423456688777776653 2222332 233333 33577777663
No 73
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=87.42 E-value=1.5 Score=44.56 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=63.2
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc---CCCH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE---GASL 400 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~---~~~L 400 (584)
||+|+|| |..|..++..|+. .|+ -..++++|.+-. .. ....+.+...+.. ... ..++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~------~a~dL~~~~~~~~-l~~~~~t~d~ 62 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PG------VAADLSHIETRAT-VKGYLGPEQL 62 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HH------HHHHHTTSSSSCE-EEEEESGGGH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HH------HHHHHhccCcCce-EEEecCCCCH
Confidence 8999998 9999988876543 354 246999998641 00 0111111110000 011 1468
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~---g-----------~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.|+++. .|++|=+.+.+ | ...+++++.|.+ ++...+|+-.|||..
T Consensus 63 ~~a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 63 PDCLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPDAMICIISNPVN 121 (314)
T ss_dssp HHHHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HHHhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCCcc
Confidence 999998 89887444433 3 235667777754 778888888999986
No 74
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.34 E-value=1.5 Score=44.00 Aligned_cols=114 Identities=11% Similarity=0.119 Sum_probs=64.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhh-----ccccccCCcC-CcccC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDFM-GLREG 397 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~-----~fA~~~~~~~-~~~~~ 397 (584)
.||.|+|+|..|..+|..+..... ... ....+++++|+..-.. .+......++ .|- +...+. +....
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~-~~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 81 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAA-QLA----QFDPRVTMWVFEEDIG-GKKLTEIINTQHENVKYL-PGHKLPPNVVAV 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH-HCT----TEEEEEEEECCCCBSS-SSBHHHHHHHHSCCTTTS-TTCCCCTTEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCC-ccc----CCCCeEEEEEcChhhh-hhHHHHHHHhcCcccccC-CcccCccCeEEE
Confidence 699999999999999999987642 000 0003688888753210 0000111000 000 000000 00112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.++.|+++. +|++| ++. +....+++++.+.....+..+|..++|-..
T Consensus 82 ~~~~~~~~~--aD~Vi-lav-~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 82 PDVVQAAED--ADILI-FVV-PHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SSHHHHHTT--CSEEE-ECC-CGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred cCHHHHHcC--CCEEE-EeC-CHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 568888876 88876 443 345778999988643345678889999543
No 75
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.25 E-value=3.9 Score=41.37 Aligned_cols=149 Identities=20% Similarity=0.231 Sum_probs=94.3
Q ss_pred HHCCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh---------C------CCCCC
Q 007939 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G------LSLTD 320 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g------~~l~d 320 (584)
...|+. .|+.--.+..|- .+ +..+ ..+.+.|--- +.+|=-+++.+|+..|.. | ..-.+
T Consensus 62 ~~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 139 (307)
T 1wwk_A 62 ESAPKLKVIARAGVGLDNI-DV-EAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIE 139 (307)
T ss_dssp TTCTTCCEEEESSSCCTTB-CH-HHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCC
T ss_pred hhCCCCeEEEECCcccccc-CH-HHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcc
Confidence 346776 788777777662 32 3333 3477777543 334555789999888732 1 01134
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
|.+.+|.|+|.|..|..+|+.+... |. +++.+|+.. .. ..+.... ....+|
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-----~~~~~l 190 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILLYDPYP---------NE---ERAKEVN-----GKFVDL 190 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHTT-----CEECCH
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCC---------Ch---hhHhhcC-----ccccCH
Confidence 5559999999999999999988653 43 688888741 11 1111100 012368
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.|.-
T Consensus 191 ~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga~lin~arg 234 (307)
T 1wwk_A 191 ETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK----KTAILINTSRG 234 (307)
T ss_dssp HHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC----TTCEEEECSCG
T ss_pred HHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC----CCeEEEECCCC
Confidence 899987 898874421 24778899999993 46688877773
No 76
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.19 E-value=3.2 Score=39.72 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=58.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+... |.. ...+++++|+. .++ + . .....++.|+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~---------~--g------~~~~~~~~~~ 55 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN---------T--T------LNYMSSNEEL 55 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS---------S--S------SEECSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc---------C--c------eEEeCCHHHH
Confidence 6899999999999999988654 420 00368888874 111 0 0 0112457777
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~ 449 (584)
++. +|++| ++.. ....+++++.+.. +.+..+|+.++|..+.
T Consensus 56 ~~~--~D~vi-~~v~-~~~~~~v~~~l~~-~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 56 ARH--CDIIV-CAVK-PDIAGSVLNNIKP-YLSSKLLISICGGLNI 96 (262)
T ss_dssp HHH--CSEEE-ECSC-TTTHHHHHHHSGG-GCTTCEEEECCSSCCH
T ss_pred Hhc--CCEEE-EEeC-HHHHHHHHHHHHH-hcCCCEEEEECCCCCH
Confidence 776 78766 3332 3456788887754 3355677788887764
No 77
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.13 E-value=0.69 Score=45.76 Aligned_cols=82 Identities=26% Similarity=0.372 Sum_probs=53.6
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcc
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~f 384 (584)
.|++.+++..|..++. .+++|+|+|.+|..+|..+... |. +++++|+.- +.-+.+
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----------~~~~~l 168 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----------EKAIKL 168 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----------HHHHHH
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----------HHHHHH
Confidence 4788888888887777 9999999999998888877653 42 588888741 111122
Q ss_pred ccccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007939 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (584)
Q Consensus 385 A~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~ 417 (584)
++... . .-..++.++++. +|++|-+..
T Consensus 169 ~~~~g-~---~~~~~~~~~~~~--aDiVi~atp 195 (275)
T 2hk9_A 169 AQKFP-L---EVVNSPEEVIDK--VQVIVNTTS 195 (275)
T ss_dssp TTTSC-E---EECSCGGGTGGG--CSEEEECSS
T ss_pred HHHcC-C---eeehhHHhhhcC--CCEEEEeCC
Confidence 22110 0 011256677765 899996654
No 78
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=86.74 E-value=0.38 Score=42.47 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=50.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.+|+|+|+|..|..++..+.. .|. + ++++|+. . +..+.|++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~------~~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----I------DHVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----H------HHHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----H------HHHHHHHHHhCC-c-eEeecCHHHH
Confidence 799999999998777665543 232 3 8888873 1 111223322100 0 0123568888
Q ss_pred hcccCCcEEEeecCCCC-CCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 404 VRKVKPHVLLGLSGVGG-VFNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g-~Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
++. .|++|=+++.+. .++.++ ..+.-+|+-+++|.
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~-------l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS-------LMPGKLFIDLGNPP 113 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG-------CCTTCEEEECCSSC
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH-------cCCCCEEEEccCCc
Confidence 876 888886654332 233221 22345666666664
No 79
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.69 E-value=0.33 Score=50.67 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=30.2
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+.||+++|||..|.-+|..|+.+.+ ++|.++|.+
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV-----------g~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-----------CEEEEecCC
Confidence 3999999999999999999988644 689999997
No 80
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.43 E-value=1.2 Score=44.14 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=58.4
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec--CcccccCCCCCChhhhccccc--cCCcCCcccCC--
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKERKNLDPAAAPFAKD--PGDFMGLREGA-- 398 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs--~GLi~~~r~~l~~~k~~fA~~--~~~~~~~~~~~-- 398 (584)
||.|+|+|..|..+|..+... | .+++++|+ +.-- +...++...+. ...+....-..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 63 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI------LKSISAGREHPRLGVKLNGVEIFWPE 63 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH------HHHHHTTCCBTTTTBCCCSEEEECGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH------HHHHHHhCcCcccCccccceEEecHH
Confidence 799999999999999888653 4 36888887 3210 00000000000 00000000112
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
++.|+++. +|++| ++. +....+++++.++. ..+..+|..++|-.
T Consensus 64 ~~~~~~~~--~D~vi-~~v-~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 64 QLEKCLEN--AEVVL-LGV-STDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred hHHHHHhc--CCEEE-EcC-ChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 67788876 78776 333 23367888888865 55567888888866
No 81
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.34 E-value=2.2 Score=42.92 Aligned_cols=101 Identities=16% Similarity=0.131 Sum_probs=59.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..|... |.. ...+++++|+.- ++ +..+.+.+.. ..-..+..|+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~~----~~----~~~~~l~~~G-----~~~~~~~~e~ 81 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPDM----DL----ATVSALRKMG-----VKLTPHNKET 81 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSCT----TS----HHHHHHHHHT-----CEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCCc----cH----HHHHHHHHcC-----CEEeCChHHH
Confidence 6899999999999999888653 421 013688888641 00 0111111110 0112457777
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~ 449 (584)
++. .|++| ++.. ....+++++.+.....+..+|..+||..+.
T Consensus 82 ~~~--aDvVi-lav~-~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~ 123 (322)
T 2izz_A 82 VQH--SDVLF-LAVK-PHIIPFILDEIGADIEDRHIVVSCAAGVTI 123 (322)
T ss_dssp HHH--CSEEE-ECSC-GGGHHHHHHHHGGGCCTTCEEEECCTTCCH
T ss_pred hcc--CCEEE-EEeC-HHHHHHHHHHHHhhcCCCCEEEEeCCCCCH
Confidence 776 77766 3332 345677777775433445677788887763
No 82
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.25 E-value=3.9 Score=42.52 Aligned_cols=171 Identities=16% Similarity=0.210 Sum_probs=103.0
Q ss_pred HHCCCe-eeEeccCCCChH-HHHHHHHhhccCccccCc---chhHHHHHHHHHHHHHH--------------------hC
Q 007939 261 ARWPKA-IVQFEDFQMKWA-FETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRA--------------------QG 315 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nA-f~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g 315 (584)
...|+. .|+.-..+..|- ...+.+.+..+.+.|--- +.+|=-+++.+|+..|. .+
T Consensus 80 ~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 80 DKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp HHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred hhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 346876 888888877774 223333222466666422 34555678999888773 23
Q ss_pred CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcc
Q 007939 316 LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (584)
Q Consensus 316 ~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~ 395 (584)
..|.. .+|.|+|.|..|..+|+.+... |+ ++++.+|+... ... .+... +..
T Consensus 160 ~~l~g---~tvgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~--------~~~---~~~~~----g~~ 210 (364)
T 2j6i_A 160 YDIEG---KTIATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL--------PKD---AEEKV----GAR 210 (364)
T ss_dssp CCSTT---CEEEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC--------CHH---HHHHT----TEE
T ss_pred ccCCC---CEEEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc--------chh---HHHhc----CcE
Confidence 44555 9999999999999999987643 43 23888886421 111 11110 000
Q ss_pred cCCCHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 396 EGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 396 ~~~~L~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
...+|.|+++. .|+++=.-- ..+.++++.+..|. +.-+|.-.|+-..--|---.+|++ +|+.--|
T Consensus 211 ~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIn~arG~~vd~~aL~~aL~--~g~i~gA 279 (364)
T 2j6i_A 211 RVENIEELVAQ--ADIVTVNAPLHAGTKGLINKELLSKFK----KGAWLVNTARGAICVAEDVAAALE--SGQLRGY 279 (364)
T ss_dssp ECSSHHHHHHT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred ecCCHHHHHhc--CCEEEECCCCChHHHHHhCHHHHhhCC----CCCEEEECCCCchhCHHHHHHHHH--cCCCcEE
Confidence 12468999886 898874321 12789999999983 467888888744322333334444 5654434
No 83
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.61 E-value=9.6 Score=40.27 Aligned_cols=216 Identities=18% Similarity=0.181 Sum_probs=117.0
Q ss_pred HCCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCC
Q 007939 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDF 321 (584)
Q Consensus 262 ~~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~------~l~dl 321 (584)
..|+. .|+.-=.+..| ..+ +..+ .-+++||--- +.+|=-++|.+|+..|.. |. .-.+|
T Consensus 66 ~~~~Lk~I~~~~~G~d~-iD~-~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el 143 (404)
T 1sc6_A 66 AAEKLVAIGAFAIGTNQ-VDL-DAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEA 143 (404)
T ss_dssp HCSSCCEEEECSSCCTT-BCH-HHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCS
T ss_pred hCCCCcEEEECCcccCc-cCH-HHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCcccc
Confidence 34654 55544455444 222 2223 3488888643 445556799999888741 10 11345
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
.+.++.|+|-|..|..+|+.+... |+ +++.+|+..- ..+ .-+ ....+|.
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~~-----~~~-----~~~---------~~~~~l~ 192 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESL-----GM-------YVYFYDIENK-----LPL-----GNA---------TQVQHLS 192 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CCC-----TTC---------EECSCHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEcCCch-----hcc-----CCc---------eecCCHH
Confidence 559999999999999999988654 43 5888887421 000 000 1124799
Q ss_pred HHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE-----eCCC
Q 007939 402 EVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGSP 472 (584)
Q Consensus 402 evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A-----sGSP 472 (584)
|+++. .|+++=.- ...+.|+++.+..|. +.-++.=.|.=..--|---.+|++ +|+.--| ..-|
T Consensus 193 ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP 264 (404)
T 1sc6_A 193 DLLNM--SDVVSLHVPENPSTKNMMGAKEISLMK----PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEP 264 (404)
T ss_dssp HHHHH--CSEEEECCCSSTTTTTCBCHHHHHHSC----TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC-----
T ss_pred HHHhc--CCEEEEccCCChHHHHHhhHHHHhhcC----CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCC
Confidence 99987 88877431 123689999999993 466888777643322222234443 5554321 1112
Q ss_pred CCccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007939 473 FENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (584)
Q Consensus 473 f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v 526 (584)
.++-+. -...-=+..|+.+-|=+|-...-+ -+.|...+++.|.+..
T Consensus 265 ~~~~~~---~~~pL~~~~nvilTPHi~~~T~ea-----~~~~~~~~~~nl~~~l 310 (404)
T 1sc6_A 265 ATNSDP---FTSPLAEFDNVLLTPHIGGSTQEA-----QENIGLEVAGKLIKYS 310 (404)
T ss_dssp ----CT---TTGGGTTCTTEEEECCCSCCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred CCcccc---ccchhhcCCCEEECCCCCCCcHHH-----HHHHHHHHHHHHHHHH
Confidence 210000 000111345888888776322221 2334555566665554
No 84
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.52 E-value=1.7 Score=47.19 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=59.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (584)
.+|.|+|+|..|..+|..|... |. +++++|+.- +.-..+.. .... .+.....++.|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----------~~~~~l~~~~~~~-~gi~~~~s~~e 67 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----------SKVDHFLANEAKG-KSIIGATSIED 67 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----------HHHHHHHHTTTTT-SSEECCSSHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHcccccC-CCeEEeCCHHH
Confidence 4899999999999999988763 53 588888641 11111211 0000 01112356788
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++.. +||++| ++..++...+++++.+.....+.-||.-+||-.+
T Consensus 68 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 68 FISKLKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp HHHTSCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhcCCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 77653 477766 4433444567777777543344567777887543
No 85
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=85.51 E-value=0.4 Score=52.16 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=74.4
Q ss_pred CceEEEeCcchhhHH--HHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccc-cccCCcCCcccCCC
Q 007939 323 DQKIVVVGAGSAGLG--VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGAS 399 (584)
Q Consensus 323 ~~riv~~GAGsAg~G--iA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA-~~~~~~~~~~~~~~ 399 (584)
..||.|+|||+.|.| +|..|+.. .++ +-..++|+|.+-=..+ .+......+. +-..+ .......+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~---~~~~~~~~~l~~~~~~-~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLD---AILTIAKKYVEEVGAD-LKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHH---HHHHHHHHHHHHTTCC-CEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHH---HHHHHHHHHhccCCCC-cEEEEECC
Confidence 369999999996544 46666531 122 1257999998531111 0111111111 00001 00112367
Q ss_pred HHHHhcccCCcEEEeecCC---------------CCCCC-------------------------HHHHHHhhhcCCCCCe
Q 007939 400 LLEVVRKVKPHVLLGLSGV---------------GGVFN-------------------------EEVLKAMRESDSVKPA 439 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~---------------~g~Ft-------------------------eevv~~M~~~~~erPI 439 (584)
+.++++. .|++|=+.+. .|.|. +++++.|.+ +|+.-+
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~-~~P~A~ 147 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK-LSPKAW 147 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH-HCTTCE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH-HCCCeE
Confidence 8899988 8988744422 13333 688888964 999999
Q ss_pred EEecCCCCCccCCCHHHHhcccCCcEEEEeC
Q 007939 440 IFAMSNPTMNAECTAADAFKHAGENIVFASG 470 (584)
Q Consensus 440 IFaLSNPt~~aE~tpeda~~wT~Grai~AsG 470 (584)
|+-.|||.. +..+-+.++..-| +|.+|
T Consensus 148 ii~~TNPvd---i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 148 YLQAANPIF---EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EEECSSCHH---HHHHHHHHHSCSE-EEEEC
T ss_pred EEEeCCcHH---HHHHHHHHCCCCc-EEecC
Confidence 999999996 4455556665554 55554
No 86
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=85.38 E-value=0.37 Score=48.64 Aligned_cols=106 Identities=13% Similarity=0.210 Sum_probs=61.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|.++|..+... |+. +++++|.+-=..+.. .++... ..+....... ....++ +
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~~~i---~~t~d~-~ 68 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIAEGIPQGKALDITHS-MVMFGSTSKV---IGTDDY-A 68 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCCchHHHHHHHHHHhh-hhhcCCCcEE---EECCCH-H
Confidence 5899999999999999888663 542 499999852000000 001000 0111000000 112456 6
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. +|++|=+.+.|.. ..+++++.+.+ +++.-||+-.|||..
T Consensus 69 a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 69 DISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLD 125 (317)
T ss_dssp GGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHH
Confidence 7776 8887754433321 23567777754 677888999999975
No 87
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.00 E-value=1.4 Score=47.18 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=61.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..|... |. +++++|+.- +.+......+. . .+.....++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~------~~~~~l~~~~~--~---~gi~~~~s~~e~ 62 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT------SKTEEVFKEHQ--D---KNLVFTKTLEEF 62 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH------HHHHHHHHHTT--T---SCEEECSSHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH------HHHHHHHHhCc--C---CCeEEeCCHHHH
Confidence 6899999999999999888653 53 478887631 01111111110 0 011123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 63 v~~l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 63 VGSLEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp HHTBCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 8753 478776 4444455567788776543345567888888653
No 88
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=84.98 E-value=0.5 Score=41.76 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..|+|+|||.||+-.|..|.. .|+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 359999999999999988765 465 47888864
No 89
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.97 E-value=1.4 Score=44.04 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=59.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|..+|..|... |+. ..++++|++---.+. ..++.+. ..+... ... ....++ +
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~~~~~~~~~~~l~~~-~~~~~~--~~~--~~~~d~-~ 65 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDANEAKVKADQIDFQDA-MANLEA--HGN--IVINDW-A 65 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSSS--CCE--EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCCHHHHHHHHHHHHhh-hhhcCC--CeE--EEeCCH-H
Confidence 4899999999999998888653 541 479999985100000 0001100 011100 000 002355 6
Q ss_pred HhcccCCcEEEeecCC-------CCCC-----------CHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGV-------GGVF-----------NEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~-------~g~F-----------teevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. .|++|=+... +|-. -+++++.|.+ +++..+|+-+|||..
T Consensus 66 ~~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 66 ALAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE-SGFHGVLVVISNPVD 126 (309)
T ss_dssp GGTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH
T ss_pred HhCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCcHH
Confidence 6766 8887744332 2211 1578888854 677778888999986
No 90
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=84.63 E-value=0.36 Score=49.34 Aligned_cols=129 Identities=16% Similarity=0.209 Sum_probs=71.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|.++|.++.. .|+- +++|+|.+-=..+. ..++.+...+.... .. .....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~---i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSN-CK---VSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCC-CC---EEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCC-cE---EEECCCH-H
Confidence 589999999999999888765 3542 39999975100000 00111111111111 00 0112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--
Q 007939 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~---g~----------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT-- 461 (584)
+++. .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+-.|||.... .+-+.+.+
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNP~~~~---t~~~~~~~g~ 142 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK-NCPNAFIIVVTNPVDVM---VQLLHQHSGV 142 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSSHHHH---HHHHHHHHCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCChHHH---HHHHHHhcCC
Confidence 7877 89887554333 31 34667777754 67887877679998732 34444433
Q ss_pred CCcEEEEeCCCCC
Q 007939 462 GENIVFASGSPFE 474 (584)
Q Consensus 462 ~Grai~AsGSPf~ 474 (584)
.-.-+|++|+..+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 2334566664443
No 91
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.40 E-value=1.1 Score=46.47 Aligned_cols=99 Identities=19% Similarity=0.306 Sum_probs=60.4
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
++...+++|+|+|..|..+|+.+... |. +++.+|+.. . .+...+..+..... .. .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~--~l~~~~~~~g~~~~-~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----D--KLRQLDAEFCGRIH-TR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSSE-EE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHHHHHhcCCeeE-ec-cCCHHH
Confidence 45559999999999999998877653 42 588888741 0 11111111211100 00 001235
Q ss_pred HHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhhcCCCCCeEEecC
Q 007939 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~~-----g~Fteevv~~M~~~~~erPIIFaLS 444 (584)
+.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk----~g~~iV~va 268 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK----PGAVLVDIA 268 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC----TTCEEEEGG
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC----CCcEEEEEe
Confidence 7888876 89999876544 457899999983 345666666
No 92
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.09 E-value=1.3 Score=43.77 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988763 43 58888874
No 93
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=83.60 E-value=5.7 Score=41.24 Aligned_cols=193 Identities=15% Similarity=0.196 Sum_probs=108.7
Q ss_pred cCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhhHHHHHHHHHHHH
Q 007939 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (584)
+++.|--- +.+|=-+++-+|+..|.. |. .-.+|.+.++.|+|.|..|-.+|+.+...
T Consensus 118 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~-- 195 (345)
T 4g2n_A 118 IKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF-- 195 (345)
T ss_dssp CEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT--
T ss_pred EEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC--
Confidence 55555321 345566788888887742 10 01345559999999999999999988654
Q ss_pred HHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCC
Q 007939 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFN 423 (584)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~----~~g~Ft 423 (584)
|+ +++.+|+... +... +... ....+|.|+++. .|+++=.-- ..+.|+
T Consensus 196 ---G~-------~V~~~dr~~~--------~~~~---~~g~------~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 196 ---GL-------AIHYHNRTRL--------SHAL---EEGA------IYHDTLDSLLGA--SDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp ---TC-------EEEEECSSCC--------CHHH---HTTC------EECSSHHHHHHT--CSEEEECSCCCGGGTTCBC
T ss_pred ---CC-------EEEEECCCCc--------chhh---hcCC------eEeCCHHHHHhh--CCEEEEecCCCHHHHHHhC
Confidence 43 6888887521 1111 1110 012479999987 898874321 237899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCC-CCccccCCCeeeeccCccccccchhhHHHH
Q 007939 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLGT 502 (584)
Q Consensus 424 eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~ 502 (584)
++.++.|. +..|+.=.|+-..--|-.-.+|++ +|+.-.| |-. |++-. + ....-=+..|+.+-|=+|-..
T Consensus 247 ~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~gA-~LDVf~~EP-~--~~~pL~~~~nvilTPHia~~t 316 (345)
T 4g2n_A 247 HDRIAKIP----EGAVVINISRGDLINDDALIEALR--SKHLFAA-GLDVFANEP-A--IDPRYRSLDNIFLTPHIGSAT 316 (345)
T ss_dssp HHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE-EESCCTTTT-S--CCTTGGGCTTEEECCSCTTCB
T ss_pred HHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCceEE-EecCCCCCC-C--CCchHHhCCCEEEcCccCcCC
Confidence 99999994 567888777644432333334444 5664433 211 11100 0 000112345788888665321
Q ss_pred HHhCCcccCHHHHHHHHHHHhccCC
Q 007939 503 LLSGARFITDGMLQQAAECLASYMT 527 (584)
Q Consensus 503 ~~~~a~~Itd~m~~aAA~alA~~v~ 527 (584)
. .-...|...+++-|.....
T Consensus 317 ~-----e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 317 H-----ETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHT
T ss_pred H-----HHHHHHHHHHHHHHHHHHc
Confidence 1 1124555556666655543
No 94
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=83.58 E-value=0.61 Score=52.33 Aligned_cols=37 Identities=22% Similarity=0.413 Sum_probs=31.9
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|++ .||+++|||..|.-+|+.|+.+.+ ++|.++|.+
T Consensus 323 kL~~---arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKN---TKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 359 (615)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCC
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCC
Confidence 4455 999999999999999999988644 689999997
No 95
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.56 E-value=1.1 Score=45.06 Aligned_cols=104 Identities=19% Similarity=0.218 Sum_probs=57.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc-ccCC--cCCcccCCCH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGD--FMGLREGASL 400 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~-~~~~--~~~~~~~~~L 400 (584)
.||.|+|+|+-|..+|..|... | .+++++|+.-. + .+...-..+-. .... +....-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~--~---~i~~~Gl~~~~~~~g~~~~~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY--E---TVKAKGIRIRSATLGDYTFRPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH--H---HHHHHCEEEEETTTCCEEECCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH--H---HHHhCCcEEeecCCCcEEEeeeeeECCH
Confidence 5899999999999999887653 4 36888887531 0 01000000000 0000 0000012344
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.++.+ .+|++| ++.. -..++++++.++....+..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK-~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIK-VVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCC-CCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecC-CCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44443 378777 5543 33456888888654456678888999764
No 96
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=83.44 E-value=0.4 Score=49.09 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=71.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|.++|..+.. .|+- +++++|.+-=..+. ..++.+...++... ..+ ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSP-AKI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCC-CEE---EECCCH-H
Confidence 589999999999999877655 3541 39999985210000 00111111111111 001 112456 7
Q ss_pred HhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCcEE
Q 007939 403 VVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (584)
Q Consensus 403 vV~~vkptvLIG~S~~---~g~-----------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT--~Grai 466 (584)
+++. .|++|=+.+. +|. .-+++.+.+.+ +++.-+|+-.|||... ..+-+.+.+ .-.-+
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGK-YCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHH-HCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 7877 8888744322 232 13566777754 6777777667999873 234443333 23345
Q ss_pred EEeCCCCC
Q 007939 467 FASGSPFE 474 (584)
Q Consensus 467 ~AsGSPf~ 474 (584)
|++|++.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 67776665
No 97
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=83.39 E-value=2.8 Score=45.25 Aligned_cols=107 Identities=17% Similarity=0.219 Sum_probs=64.6
Q ss_pred CceEEEeCcchh--hHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCC
Q 007939 323 DQKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 323 ~~riv~~GAGsA--g~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
..||.|+|||+. |.|++..|+.. ..+. ..|+|+|.+- ++ +.+......+.+ .++. .....+
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~----~~~~-----geV~L~Di~~----e~le~~~~~~~~l~~--~~~~-I~~TtD 68 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID----ERMS-----GTVALYDLDF----EAAQKNEVIGNHSGN--GRWR-YEAVST 68 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC----SSCC-----EEEEEECSSH----HHHHHHHHHHTTSTT--SCEE-EEEESS
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc----cccC-----CeEEEEeCCH----HHHHHHHHHHHHHhc--cCCe-EEEECC
Confidence 379999999995 68998888752 2221 3799999751 11 000000011111 1100 113468
Q ss_pred HHHHhcccCCcEEEeecCCC---------------CC---------------------CCHHHHHHhhhcCCCCCeEEec
Q 007939 400 LLEVVRKVKPHVLLGLSGVG---------------GV---------------------FNEEVLKAMRESDSVKPAIFAM 443 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~~---------------g~---------------------Fteevv~~M~~~~~erPIIFaL 443 (584)
+.|+++. +|++|=.-.++ |. .-.++++.|. ++++.-+|+-.
T Consensus 69 ~~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~-~~~p~a~~i~~ 145 (450)
T 3fef_A 69 LKKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIR-DYAPESWVINY 145 (450)
T ss_dssp HHHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHH-HHCTTSEEEEC
T ss_pred HHHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHH-HHCCCeEEEEe
Confidence 9999998 89887333211 11 1356777775 48999999999
Q ss_pred CCCCC
Q 007939 444 SNPTM 448 (584)
Q Consensus 444 SNPt~ 448 (584)
|||..
T Consensus 146 tNPvd 150 (450)
T 3fef_A 146 TNPMS 150 (450)
T ss_dssp CSSHH
T ss_pred cCchH
Confidence 99986
No 98
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.32 E-value=1.6 Score=44.71 Aligned_cols=114 Identities=14% Similarity=0.212 Sum_probs=62.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhh-----ccccccCCc-CCcccC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDF-MGLREG 397 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~-----~fA~~~~~~-~~~~~~ 397 (584)
.||.|+|+|..|..+|..+..+... .. .-..+++++|+..-+. .+......++ .|- +...+ .+..-.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDEFVN-GERMVDIINNKHENTKYL-KGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSCC----CCHHHHHHHHCBCTTTS-TTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECChhhh-hHHHHHHHHhcCcccccC-CcccCcCCeEEE
Confidence 4899999999999999999876420 00 0003688888753210 0000111000 000 00000 000113
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh----cCCCCCeEEecCCCCC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE----SDSVKPAIFAMSNPTM 448 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~----~~~erPIIFaLSNPt~ 448 (584)
.++.|+++. .|++| ++. +....+++++.+.. ...+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav-~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIV-PCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECC-CHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcC-CHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 567888876 78766 332 33567888888753 2345668888998654
No 99
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=83.10 E-value=3.1 Score=41.74 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.++|..+... |. ++++++|+.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999998764 43 368888884
No 100
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.04 E-value=5.5 Score=40.94 Aligned_cols=113 Identities=19% Similarity=0.280 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHHHHHHh---------C----CC---CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcE
Q 007939 298 GTAGVALAGLLGTVRAQ---------G----LS---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKF 361 (584)
Q Consensus 298 GTaaV~LAgll~Alr~~---------g----~~---l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i 361 (584)
.+|=-+++-+|+..|.. | .. -.+|.+.+|.|+|.|..|..+|+.+... |+ ++
T Consensus 123 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V 190 (333)
T 3ba1_A 123 DVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAF-----DC-------PI 190 (333)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTT-----TC-------CE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EE
Confidence 34445677777776531 1 00 1244559999999999999999987653 43 58
Q ss_pred EEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCC
Q 007939 362 FLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVK 437 (584)
Q Consensus 362 ~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~er 437 (584)
+.+|+..- ... .+ ....+|.|+++. .|+++=.- ...+.++++.++.|. +.
T Consensus 191 ~~~dr~~~------~~~----g~----------~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk----~g 244 (333)
T 3ba1_A 191 SYFSRSKK------PNT----NY----------TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG----PK 244 (333)
T ss_dssp EEECSSCC------TTC----CS----------EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC----TT
T ss_pred EEECCCch------hcc----Cc----------eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC----CC
Confidence 88887421 110 01 012468899887 89877432 124788889999993 45
Q ss_pred CeEEecCCCCC
Q 007939 438 PAIFAMSNPTM 448 (584)
Q Consensus 438 PIIFaLSNPt~ 448 (584)
.+|.-.|.-..
T Consensus 245 ailIn~srG~~ 255 (333)
T 3ba1_A 245 GVLINIGRGPH 255 (333)
T ss_dssp CEEEECSCGGG
T ss_pred CEEEECCCCch
Confidence 67777776443
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=83.01 E-value=0.3 Score=52.92 Aligned_cols=130 Identities=19% Similarity=0.197 Sum_probs=75.5
Q ss_pred ceEEEeCcchh-hHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccc-cccCCcCCcccCCCHH
Q 007939 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 401 (584)
Q Consensus 324 ~riv~~GAGsA-g~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA-~~~~~~~~~~~~~~L~ 401 (584)
.||.|+|||+. +.++|..|+.. ..++.. ..++|+|.+-=..+ .+.+....+. .-..+. ......++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~~----~eV~L~Di~~e~~~---~~~~~~~~~l~~~~~~~-~I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFPI----RKLKLYDNDKERQD---RIAGACDVFIREKAPDI-EFAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSCE----EEEEEECSCHHHHH---HHHHHHHHHHHHHCTTS-EEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCCC----CEEEEEeCCHHHHH---HHHHHHHHHhccCCCCC-EEEEECCHH
Confidence 69999999996 44456555441 124421 46999998531111 1111111221 100010 011236799
Q ss_pred HHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 402 EVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~g~----------------------------------Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
++++. .|++|=+.+.++. .=+++++.|.+ +|+.-+|+-.|||.
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~-~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEK-YSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSCH
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCcH
Confidence 99998 8998855543211 13588888864 99999999999999
Q ss_pred CccCCCHHHHhcccCCcEEEEeC
Q 007939 448 MNAECTAADAFKHAGENIVFASG 470 (584)
Q Consensus 448 ~~aE~tpeda~~wT~Grai~AsG 470 (584)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 4555556655443566654
No 102
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.99 E-value=0.84 Score=44.13 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=57.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+... |. +.++++|+.. +.+. .+++... .....++.|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~------~~~~----~~~~~~g----~~~~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE------ESAR----ELAQKVE----AEYTTDLAEV 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH------HHHH----HHHHHTT----CEEESCGGGS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH------HHHH----HHHHHcC----CceeCCHHHH
Confidence 7999999999999999887653 43 2377888631 0111 1111100 0012356666
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++. +|++|= +..+.. .+++++.+.....+..||.-+||-.+
T Consensus 66 ~~~--~Dvvi~-av~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 66 NPY--AKLYIV-SLKDSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSC--CSEEEE-CCCHHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred hcC--CCEEEE-ecCHHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 664 788773 333333 37888877542335678888888555
No 103
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.84 E-value=3 Score=42.35 Aligned_cols=121 Identities=21% Similarity=0.245 Sum_probs=70.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|.|+|..++.. |+- ..++|+|.+-= ..+. .++.+ +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~~-----~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GIA-----DRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CCC-----CEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988642 442 57999998531 1111 01111 1111 11 112456 6
Q ss_pred HhcccCCcEEEeecCCC--CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccC--CcEEE
Q 007939 403 VVRKVKPHVLLGLSGVG--GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVF 467 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~--g~-----------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~--Grai~ 467 (584)
+++. .|++|=+.+.+ |- .-+++++.|.+ +++.-+|+-.|||.. ...+-+++.+. -.-+|
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rvi 147 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVI 147 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHee
Confidence 7777 89888554332 20 13567777854 788889888999986 44444445321 12355
Q ss_pred EeCC
Q 007939 468 ASGS 471 (584)
Q Consensus 468 AsGS 471 (584)
.+|.
T Consensus 148 G~gt 151 (303)
T 2i6t_A 148 GIGC 151 (303)
T ss_dssp ECTT
T ss_pred CCCC
Confidence 7753
No 104
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=82.77 E-value=1.1 Score=44.73 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.|+..+++..|.. .. .+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4566666666653 45 799999999999888877654 354 579988874
No 105
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.75 E-value=1.2 Score=39.57 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 799999999999999887755 24 268899874
No 106
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=82.36 E-value=0.83 Score=46.05 Aligned_cols=125 Identities=20% Similarity=0.251 Sum_probs=67.5
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|.++|..+.. .|+- ..++++|.+---.+.. .++.+.. +|..+. .. . ..+ .++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~-~i---~-~~~-~~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRDEDRAQAEAEDIAHAA-PVSHGT-RV---W-HGG-HSE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHTTSC-CTTSCC-EE---E-EEC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCHHHHHHHHHhhhhhh-hhcCCe-EE---E-ECC-HHH
Confidence 89999999999999976644 3542 3699999852100000 0111100 111110 00 0 123 356
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEe
Q 007939 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFAS 469 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~As 469 (584)
++. .|++|=+.+.+.. .-+++++.|.+ +++.-+|+-.|||.. .....+.+.+.-.-+|.+
T Consensus 65 ~~~--aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 65 LAD--AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp GTT--CSEEEECC------------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEEC
T ss_pred hCC--CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchH---HHHHHHHHhCChhcEEeC
Confidence 766 8888754433322 12677788865 677778777999985 233344444444456666
Q ss_pred CCC
Q 007939 470 GSP 472 (584)
Q Consensus 470 GSP 472 (584)
|.-
T Consensus 139 gt~ 141 (304)
T 2v6b_A 139 GTV 141 (304)
T ss_dssp TTH
T ss_pred CcC
Confidence 543
No 107
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.27 E-value=1.9 Score=43.07 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=53.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc--ccCCcC---Cc-ccC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK--DPGDFM---GL-REG 397 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~--~~~~~~---~~-~~~ 397 (584)
.||.|+|+|..|..+|..+... | .+++++|+..= .+...++.... ...... .. ...
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ------RIKEIQDRGAIIAEGPGLAGTAHPDLLT 66 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH------HHHHHHHHTSEEEESSSCCEEECCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH------HHHHHHhcCCeEEeccccccccccceec
Confidence 6899999999999999887542 4 25888887421 01111100000 000000 00 012
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
.++.++++. +|++| ++. +....+++++.++....+..+|+.+.|
T Consensus 67 ~~~~~~~~~--~D~vi-~~v-~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 67 SDIGLAVKD--ADVIL-IVV-PAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SCHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CCHHHHHhc--CCEEE-EeC-CchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 467777765 78766 332 233347888877543444556666644
No 108
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=81.99 E-value=3.1 Score=45.17 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=63.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.+|.|+|.|..|..+|..+... |. +++++|+.- +.-..+++....-.......++.|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~~g~~i~~~~s~~e~ 62 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----------SKVDDFLANEAKGTKVVGAQSLKEM 62 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----------HHHHHHHHTTTTTSSCEECSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHhcccCCCceeccCCHHHH
Confidence 6899999999999999888663 53 588888741 1111222110000000123678898
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++.+ +||++| ++-.++...+++++.+.....+..||.-.||-.+
T Consensus 63 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 63 VSKLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp HHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 8754 478766 4444455667888877654567778988988653
No 109
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=81.98 E-value=5.1 Score=41.30 Aligned_cols=131 Identities=15% Similarity=0.226 Sum_probs=91.3
Q ss_pred HHHHHHHHHHC--CCe---eeEeccCCCChHHHHHHHHh--hccCcccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 007939 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (584)
Q Consensus 253 defv~av~~~~--P~~---lIqfEDf~~~nAf~lL~ryr--~~~~~FND--------DiQGTaaV~LAgll~Alr~~g~~ 317 (584)
+|+++.+.++- |++ ++|+==.+.-+..++++.-. +.+=.||. ...+-.-+|-.|++--|+..+.+
T Consensus 97 ~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~PcTp~gv~~lL~~~~i~ 176 (303)
T 4b4u_A 97 EQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIE 176 (303)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccCccHHHHHHHHHHHCCC
Confidence 66777777665 553 77766556666666666542 12222211 12344567888999999999999
Q ss_pred CCCCCCceEEEeCcc-hhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc
Q 007939 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (584)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~ 396 (584)
++- .++|++|.+ -.|.-+|.||.. +|. .+.++.|+
T Consensus 177 l~G---k~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~----------------------------- 212 (303)
T 4b4u_A 177 IAG---KHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR----------------------------- 212 (303)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-----------------------------
Confidence 988 999999975 467777777654 232 35555442
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~ 429 (584)
..+|.+.+++ +|+||-..+.|+.++.++||.
T Consensus 213 T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 2468899988 999999999999999998874
No 110
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=81.90 E-value=5.5 Score=41.26 Aligned_cols=128 Identities=18% Similarity=0.229 Sum_probs=71.6
Q ss_pred hhHHHHHHHHHHHHHHh---------C----C---C-CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCc
Q 007939 298 GTAGVALAGLLGTVRAQ---------G----L---S-LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNK 360 (584)
Q Consensus 298 GTaaV~LAgll~Alr~~---------g----~---~-l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~ 360 (584)
.+|=-+++-+|+..|.. | . + -.+|.+.+|.|+|.|..|..+|+.+... |+ +
T Consensus 129 ~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~-----G~-------~ 196 (340)
T 4dgs_A 129 DVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF-----GM-------S 196 (340)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------E
T ss_pred hHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC-----CC-------E
Confidence 34555777777777631 1 0 1 1345559999999999999999987653 44 5
Q ss_pred EEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCC
Q 007939 361 FFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSV 436 (584)
Q Consensus 361 i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~e 436 (584)
++.+|+..- . . ..+ ....+|.|+++. .|+++=.- ...+.++++.++.|. +
T Consensus 197 V~~~dr~~~----~-~-----~~~----------~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk----~ 250 (340)
T 4dgs_A 197 VRYWNRSTL----S-G-----VDW----------IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG----P 250 (340)
T ss_dssp EEEECSSCC----T-T-----SCC----------EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT----T
T ss_pred EEEEcCCcc----c-c-----cCc----------eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC----C
Confidence 888887421 0 0 011 112579999987 89887432 124778999999994 4
Q ss_pred CCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007939 437 KPAIFAMSNPTMNAECTAADAFKHAGENI 465 (584)
Q Consensus 437 rPIIFaLSNPt~~aE~tpeda~~wT~Gra 465 (584)
.-++.=.|.-..--|-.-.+|++ +|+.
T Consensus 251 gailIN~aRG~vvde~aL~~aL~--~g~i 277 (340)
T 4dgs_A 251 EGIVVNVARGNVVDEDALIEALK--SGTI 277 (340)
T ss_dssp TCEEEECSCC----------------CCS
T ss_pred CCEEEECCCCcccCHHHHHHHHH--cCCc
Confidence 66888888755433444445544 4543
No 111
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=81.83 E-value=0.66 Score=45.54 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=29.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.||+|+|+|..|.-+|..|+.+ |+ ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 8999999999999999988876 44 5899999973
No 112
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=81.82 E-value=5.6 Score=41.33 Aligned_cols=199 Identities=17% Similarity=0.151 Sum_probs=112.3
Q ss_pred HCCCe-eeEeccCCCChHHHHHHHHhhccCccccC-c--chhHHHHHHHHHHHHHHh--------------------CCC
Q 007939 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDD-I--QGTAGVALAGLLGTVRAQ--------------------GLS 317 (584)
Q Consensus 262 ~~P~~-lIqfEDf~~~nAf~lL~ryr~~~~~FNDD-i--QGTaaV~LAgll~Alr~~--------------------g~~ 317 (584)
..|+. +|+.--.+..| ..+-.--+.-+.+.|-- . +.+|=-+++-+|+..|.. +..
T Consensus 83 ~~p~Lk~i~~~g~G~d~-id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 161 (351)
T 3jtm_A 83 KAKNLKLLLTAGIGSDH-IDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYD 161 (351)
T ss_dssp HCSSCCEEEESSSCCTT-BCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCC
T ss_pred hCCCCeEEEEeCeeecc-cCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCccc
Confidence 35665 56654455444 22211112335555532 2 344556788888887631 344
Q ss_pred CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccC
Q 007939 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREG 397 (584)
Q Consensus 318 l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~ 397 (584)
|.. .+|.|+|.|..|..+|+.+... |+ +++.+|+... +.. .+.... ....
T Consensus 162 l~g---ktvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~--------~~~---~~~~~g----~~~~ 211 (351)
T 3jtm_A 162 LEG---KTIGTVGAGRIGKLLLQRLKPF-----GC-------NLLYHDRLQM--------APE---LEKETG----AKFV 211 (351)
T ss_dssp STT---CEEEEECCSHHHHHHHHHHGGG-----CC-------EEEEECSSCC--------CHH---HHHHHC----CEEC
T ss_pred ccC---CEEeEEEeCHHHHHHHHHHHHC-----CC-------EEEEeCCCcc--------CHH---HHHhCC----CeEc
Confidence 555 9999999999999999988654 44 5888887521 111 111100 0112
Q ss_pred CCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCC
Q 007939 398 ASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPF 473 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf 473 (584)
.+|.|+++. .|+++=.- ...+.|+++.++.|. +..+|.=.|+-..--|---.+|++ +|+.--|.--=|
T Consensus 212 ~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~ 283 (351)
T 3jtm_A 212 EDLNEMLPK--CDVIVINMPLTEKTRGMFNKELIGKLK----KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVW 283 (351)
T ss_dssp SCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCC
T ss_pred CCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHHhcCC----CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCC
Confidence 479999988 89887331 224689999999994 577888888755433444445554 566554433223
Q ss_pred CccccCCCeeeeccCccccccchhhHHH
Q 007939 474 ENVDLGNGKIGHVNQANNMYLFPGIGLG 501 (584)
Q Consensus 474 ~pv~~~~G~~~~p~Q~NN~~iFPGiglG 501 (584)
.+-..+... .--+..|+.+-|=++-.
T Consensus 284 ~~EP~~~~~--pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 284 DPQPAPKDH--PWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp SSSSCCTTC--GGGTSTTBCCCCSCGGG
T ss_pred CCCCCCCCC--hhhcCCCEEECCcCCCC
Confidence 211111011 11234588888876543
No 113
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.81 E-value=2.1 Score=41.17 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=56.7
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHh
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVV 404 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV 404 (584)
||.|+|+|..|..+|..|... | .+++++|+.- + .+...+...... ..+.. .-..+..+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~--~~~~l~~~~~~~-~~~~~-~~~~~~~~~~ 61 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----Q--PYCSVNLVETDG-SIFNE-SLTANDPDFL 61 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----C--SEEEEEEECTTS-CEEEE-EEEESCHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----c--ceeeEEEEcCCC-ceeee-eeeecCcccc
Confidence 799999999999999888653 4 2688888742 1 111100000000 00000 0001224667
Q ss_pred cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 405 RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 405 ~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+. +|++| ++..+. ..+++++.++....+..+|..++|...
T Consensus 62 ~~--~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 62 AT--SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp HT--CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred CC--CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 65 88877 443333 358999888653455667777899653
No 114
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=81.69 E-value=2.4 Score=42.71 Aligned_cols=124 Identities=17% Similarity=0.213 Sum_probs=70.0
Q ss_pred eEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec--CcccccC-CCCCChhhhccccccCCcCCcccCCCH
Q 007939 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 325 riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs--~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
||+|.| +|..|..++..|+. .|+- ..++|+|. +-=-.++ ..+|.+... +.++. .. ...+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~-~v----~~~~- 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNT-RV----RQGG- 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCC-EE----EECC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCc-EE----EeCC-
Confidence 899999 99999988877654 2432 46999997 3100000 001222111 11110 00 0122
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCc
Q 007939 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~---g~-----------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT--~Gr 464 (584)
.++++. .|++|=+.+.+ |- .++++++.|.+ ++.+.+|+--|||.. ...+-+++.+ +-+
T Consensus 65 ~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNPv~---~~~~~~~~~~~~p~~ 138 (303)
T 1o6z_A 65 YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNPVD---LLNRHLYEAGDRSRE 138 (303)
T ss_dssp GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSSHH---HHHHHHHHHSSSCGG
T ss_pred HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCChHH---HHHHHHHHHcCCCHH
Confidence 566776 88888555544 32 35678888854 788999999999985 3444454543 112
Q ss_pred EEEEeCC
Q 007939 465 IVFASGS 471 (584)
Q Consensus 465 ai~AsGS 471 (584)
-+|++|.
T Consensus 139 rviG~gt 145 (303)
T 1o6z_A 139 QVIGFGG 145 (303)
T ss_dssp GEEECCH
T ss_pred Heeeccc
Confidence 3556653
No 115
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=81.60 E-value=0.55 Score=50.52 Aligned_cols=131 Identities=13% Similarity=0.150 Sum_probs=76.0
Q ss_pred ceEEEeCcchh-hHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhcccc-ccCCcCCcccCCCH
Q 007939 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAK-DPGDFMGLREGASL 400 (584)
Q Consensus 324 ~riv~~GAGsA-g~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~-~~~~~~~~~~~~~L 400 (584)
.||.|+|||+. |..++..|+.. ..++.. ..++|+|.+--. ++ +.+.+....+.. -..++. .....++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~~----~ev~L~Di~~~~--e~~~~~~~~~~~~~~~~~~~~~-i~~t~D~ 77 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELPV----GELWLVDIPEGK--EKLEIVGALAKRMVEKAGVPIE-IHLTLDR 77 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCCE----EEEEEECCGGGH--HHHHHHHHHHHHHHHHTTCCCE-EEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCCC----CEEEEEEcCCCh--HHHHHHHHHHHHHHhhcCCCcE-EEEeCCH
Confidence 69999999997 44444444431 144421 579999985300 11 001111112211 000100 1123678
Q ss_pred HHHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNP 446 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g~----------------------------------Fteevv~~M~~~~~erPIIFaLSNP 446 (584)
.|+++. .|++|=+.++++. .=.++++.|.+ +|+.-+|+-.|||
T Consensus 78 ~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~-~~P~a~ii~~tNP 154 (450)
T 1s6y_A 78 RRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE-LCPDAWLINFTNP 154 (450)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSS
T ss_pred HHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 999998 8998855554321 12578888854 9999999999999
Q ss_pred CCccCCCHHHHhcccCCcEEEEeC
Q 007939 447 TMNAECTAADAFKHAGENIVFASG 470 (584)
Q Consensus 447 t~~aE~tpeda~~wT~Grai~AsG 470 (584)
.. +..+-+++.+.-.-+|.+|
T Consensus 155 vd---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 155 AG---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp HH---HHHHHHHHHCCCCCEEECC
T ss_pred HH---HHHHHHHHhCCCCCEEEeC
Confidence 85 4555566767443566665
No 116
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.41 E-value=1.6 Score=46.98 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=60.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|..|..+|..|... |. +++++|+..= .+....+.+-. +.. .+.....++.|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~~l~~~~g~~~~~--~~i~~~~~~~e 61 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTYS------KSEEFMKANASAPFA--GNLKAFETMEA 61 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSHH------HHHHHHHHTTTSTTG--GGEEECSCHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHhcCCCCCC--CCeEEECCHHH
Confidence 3799999999999999887653 53 5888887411 01111110000 000 00112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++.. ++|++| ++..++...+++++.+.....+.-||.-+||-.+
T Consensus 62 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 62 FAASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp HHHHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred HHhcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 88753 488877 4444444567788776543445668888888654
No 117
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.34 E-value=2.3 Score=45.62 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=60.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~-~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|..|..+|..|... |. +++++|+..= .+. .+.+ .... .+.....++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~----~l~~~~~~g-~gi~~~~~~~e 59 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTVS------KVD----DFLANEAKG-TKVLGAHSLEE 59 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSTH------HHH----HHHHTTTTT-SSCEECSSHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCHH------HHH----HHHhccccC-CCeEEeCCHHH
Confidence 5899999999999999888653 53 5888886311 111 1111 0000 01112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++.+ ++|++| ++..++...+++++.+.....+.-||+-+||-.+
T Consensus 60 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 60 MVSKLKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp HHHHBCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred HHhhccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88632 488877 4444454567788776543344568888888654
No 118
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=81.08 E-value=4.5 Score=41.06 Aligned_cols=115 Identities=20% Similarity=0.150 Sum_probs=63.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|||+.|..+|-+++. .|+- ..++++|.+ .++ +......+.+..+-.....-..+-.++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVF----KEK--AIGEAMDINHGLPFMGQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC----hHH--HHHHHHHHHHhHHhcCCeEEEECCHHH
Confidence 589999999999988777544 3442 479999975 121 221111222211000000000122556
Q ss_pred hcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 404 VRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-------F----teevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
++. .|++|=+.+.+ |- + -+++++.|.+ ++..-+|+-.|||.. .+.+-+++.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~~~~~~k~ 136 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMK-YYNHGVILVVSNPVD---IITYMIQKW 136 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHH-HCCSCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 776 89887544433 31 1 1678888864 688888888999975 344444444
No 119
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=80.92 E-value=0.76 Score=51.39 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=31.7
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|++ .||+++|||..|.-||..|+.+ |+ ++|.++|.+
T Consensus 324 kL~~---~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 324 IIKN---TKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 4555 9999999999999999998876 44 689999986
No 120
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=80.82 E-value=0.67 Score=45.60 Aligned_cols=37 Identities=27% Similarity=0.468 Sum_probs=30.9
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|++ .||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~---~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLD---SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHT---CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhc---CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 3455 8999999999999998888765 54 689999987
No 121
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=80.79 E-value=1.9 Score=43.94 Aligned_cols=107 Identities=18% Similarity=0.214 Sum_probs=63.7
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC---------cccccCCCCCChhhhccccccCCcCC
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD---------GLITKERKNLDPAAAPFAKDPGDFMG 393 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~---------GLi~~~r~~l~~~k~~fA~~~~~~~~ 393 (584)
.||+|.|| |..|..++..|+. .|+-...-...++++|.. |... +|.+.-.+|..+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~----dl~~~~~~~~~~------ 70 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMM----EIDDCAFPLLAG------ 70 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHH----HHHTTTCTTEEE------
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHH----HHhhhcccccCc------
Confidence 69999998 9999888776654 343110112369999975 1110 111100012111
Q ss_pred cccCCCHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCC-CCCeEEecCCCCC
Q 007939 394 LREGASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDS-VKPAIFAMSNPTM 448 (584)
Q Consensus 394 ~~~~~~L~evV~~vkptvLIG~S~~~---g~-----------Fteevv~~M~~~~~-erPIIFaLSNPt~ 448 (584)
.....++.++++. .|++|=+.+.+ |- .++++++.+.+ ++ ...+|+-.|||..
T Consensus 71 i~~~~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 71 MTAHADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDA-VASRNIKVLVVGNPAN 137 (329)
T ss_dssp EEEESSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH
T ss_pred EEEecCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEccCchH
Confidence 1123678999988 88888555443 31 25678888864 65 7767777899983
No 122
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=80.46 E-value=1.8 Score=44.44 Aligned_cols=114 Identities=17% Similarity=0.203 Sum_probs=65.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|..+|-+|+. .++- ..|+|+|.+-=-.++ ..+|.+.. +|..+.. -..+..+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~-----~~~~-----~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVL-----QGIA-----QEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCC-----SEEEEECSCHHHHHHHHHHHHTTG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHc-----CCCC-----CEEEEEeCCchHhHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 699999999999998887644 2431 579999974100000 00121111 2322110 0113466
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
+++. .|++|=+.+.+.. .-+++++.|.+ ++..-+|+-.|||.. ...+-+++.
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 138 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 7777 8998855544422 12345566643 788999999999986 344455553
No 123
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=80.21 E-value=2 Score=43.84 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=64.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|..+|-+|+.. |+- ..|+|+|.+-=-.++ ..+|.+.. +|.++.. -..+..+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------v~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GIA-----EEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKK------IYSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHGGG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CCC-----CEEEEEeCCchHHHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 5999999999999888776542 442 579999973100000 00122211 2322110 0113456
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
+++. .|++|=+.+.+.. .-+++++.|.+ ++..-+|+-.|||.. ...+-+++.
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 134 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVD-SGFDGIFLVAANPVD---ILTYATWKF 134 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 6777 8988744443321 12445666643 789999999999986 344455554
No 124
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.15 E-value=1.8 Score=42.44 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999988663 42 57888874
No 125
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.82 E-value=2.8 Score=44.65 Aligned_cols=71 Identities=18% Similarity=0.357 Sum_probs=47.4
Q ss_pred CceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
.-|++|+|+ |.+|.|-++.+... |.. ..++..+|.+= + .+ . . .+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~--~-~~------------g-~---------~~- 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE--T-SR------------G-G---------PF- 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH--H-TT------------C-S---------CC-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc--c-cc------------C-C---------ch-
Confidence 368999999 99999998887764 331 11566777641 0 00 0 0 01
Q ss_pred HHhcccCCcEEEeecCC----CCCCCHHHHHHh
Q 007939 402 EVVRKVKPHVLLGLSGV----GGVFNEEVLKAM 430 (584)
Q Consensus 402 evV~~vkptvLIG~S~~----~g~Fteevv~~M 430 (584)
+.+.. .|++||+--. |-++|+|.|+.|
T Consensus 259 ~~i~~--aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 259 DEIPQ--ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp THHHH--SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred hhHhh--CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 12443 7999988654 678999999999
No 126
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=79.71 E-value=2.4 Score=42.34 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999988764 43 58888874
No 127
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=79.57 E-value=1 Score=46.77 Aligned_cols=37 Identities=27% Similarity=0.530 Sum_probs=31.5
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|++ .||+++|+|..|.-+|..|+.+.+ .+|.++|.+
T Consensus 115 ~L~~---~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D 151 (353)
T 3h5n_A 115 KLKN---AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDND 151 (353)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECC
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCC
Confidence 4556 899999999999999998888644 689999986
No 128
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.47 E-value=3.3 Score=41.87 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |.. .+++++|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECC
Confidence 6999999999999999888653 542 378888874
No 129
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=79.28 E-value=4.8 Score=42.14 Aligned_cols=184 Identities=19% Similarity=0.129 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcC
Q 007939 298 GTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 359 (584)
Q Consensus 298 GTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~ 359 (584)
.+|=-+++-+|+..|.. |. .-.+|.+.++.|+|.|..|-.+|+.+..+ |+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~f-----G~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGF-----RA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTS-----CC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhC-----CC-------
Confidence 44556778888777631 21 12355669999999999999999977543 44
Q ss_pred cEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEee----cCCCCCCCHHHHHHhhhcCC
Q 007939 360 KFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDS 435 (584)
Q Consensus 360 ~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~----S~~~g~Fteevv~~M~~~~~ 435 (584)
+++.+|+.. ... .+... + ....+|.|+++. .|+++=. ....+.++++.+..|.
T Consensus 201 ~V~~~d~~~---------~~~---~~~~~----g-~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---- 257 (365)
T 4hy3_A 201 RIRVFDPWL---------PRS---MLEEN----G-VEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---- 257 (365)
T ss_dssp EEEEECSSS---------CHH---HHHHT----T-CEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC----
T ss_pred EEEEECCCC---------CHH---HHhhc----C-eeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC----
Confidence 588888641 111 11110 0 012579999987 8998832 2235789999999994
Q ss_pred CCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCC-CCccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHH
Q 007939 436 VKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGM 514 (584)
Q Consensus 436 erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m 514 (584)
+.-|+.=.|.-..--|---.+|++ +|+.- | |-. |++-..+.+. .-=+..|+.+-|=+|-... .--..|
T Consensus 258 ~gailIN~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~~~~--pL~~~~nvilTPHia~~t~-----e~~~~~ 326 (365)
T 4hy3_A 258 RGAAFILLSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLPLDH--PVRSLKGFIRSAHRAGALD-----SAFKKM 326 (365)
T ss_dssp TTCEEEECSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCCTTC--GGGTCTTEEECCSCSSCCH-----HHHHHH
T ss_pred CCcEEEECcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCCCCC--hhhcCCCEEECCccccCHH-----HHHHHH
Confidence 567888777654422333334444 56644 3 211 1110010010 1124568888887653222 223455
Q ss_pred HHHHHHHHhccCC
Q 007939 515 LQQAAECLASYMT 527 (584)
Q Consensus 515 ~~aAA~alA~~v~ 527 (584)
...+++-|.....
T Consensus 327 ~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 327 GDMVLEDMDLMDR 339 (365)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 5666666666654
No 130
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.28 E-value=1.9 Score=42.23 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=56.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+... |.. .+++++|++.- .+. .+.+.... .....++.|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~~------~~~----~~~~~g~~---~~~~~~~~~~ 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRSDR------SRD----IALERGIV---DEATADFKVF 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSSHH------HHH----HHHHTTSC---SEEESCTTTT
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCCHH------HHH----HHHHcCCc---ccccCCHHHh
Confidence 6899999999999999988653 211 36888887410 011 11110000 0012345566
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCC
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPT 447 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~-~~erPIIFaLSNPt 447 (584)
++. +|++| ++..+... +++++.+... ..+..||.-+||-.
T Consensus 64 ~~~--aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 64 AAL--ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp GGG--CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred hcC--CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 665 78777 44433443 7888887542 34566777677643
No 131
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=79.19 E-value=3.3 Score=42.78 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=60.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhh--hccccccCCcC-CcccCCCH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA--APFAKDPGDFM-GLREGASL 400 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k--~~fA~~~~~~~-~~~~~~~L 400 (584)
.||.|+|+|+-|..+|..+... | .+++++|++--..+ .+.... ..|-.. -.+. +..-..++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~---~i~~~~~~~~~l~g-~~l~~~i~~t~d~ 93 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVD---EMQAEGVNNRYLPN-YPFPETLKAYCDL 93 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHH---HHHHHSSBTTTBTT-CCCCTTEEEESCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHH---HHHHcCCCcccCCC-CccCCCeEEECCH
Confidence 6899999999999999888653 4 25778887411100 010000 001000 0000 00113578
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.|+++. +|++| ++. |-.+.+++++.++....+..+|..++|-..
T Consensus 94 ~ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 94 KASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 888876 77766 332 334678888888654455667888888554
No 132
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=78.85 E-value=2.7 Score=42.97 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 6899999999999999988764 54 58888874
No 133
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.66 E-value=1.4 Score=44.46 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=58.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|+.|..+|..|... | .+++++|+.--+..-+ .++.... +....... ..-..++.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~-~~~~~~~~---~~~~~~~~~ 67 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTE-DGATHTLP---VRATHDAAA 67 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEE-TTEEEEEC---CEEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEec-CCCeEEEe---eeEECCHHH
Confidence 6999999999999999888663 4 2588888731110000 0110000 00000000 011245665
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt 447 (584)
++. +|++| ++. +-...+++++.++....+..+|..++|..
T Consensus 68 -~~~--~D~Vi-lav-k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 68 -LGE--QDVVI-VAV-KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp -HCC--CSEEE-ECC-CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred -cCC--CCEEE-EeC-CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 444 78876 443 33467888888865445677999999994
No 134
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=78.66 E-value=10 Score=38.45 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=78.0
Q ss_pred cCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhhHHHHHHHHHHHH
Q 007939 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (584)
+.+.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 89 i~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 166 (311)
T 2cuk_A 89 IRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF-- 166 (311)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred cEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC--
Confidence 55555432 234555788888877632 10 01245559999999999999999988653
Q ss_pred HHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007939 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 423 (584)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Ft 423 (584)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++
T Consensus 167 ---G~-------~V~~~d~~~----~~--~~------~----------~~~~l~ell~~--aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 167 ---GM-------RVVYHARTP----KP--LP------Y----------PFLSLEELLKE--ADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp ---TC-------EEEEECSSC----CS--SS------S----------CBCCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred ---CC-------EEEEECCCC----cc--cc------c----------ccCCHHHHHhh--CCEEEEeCCCChHHHhhcC
Confidence 43 588888742 11 11 1 12468899887 89888542 2247788
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 424 EEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 424 eevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++.++.|. +..++.=.|.-..
T Consensus 213 ~~~l~~mk----~ga~lin~srg~~ 233 (311)
T 2cuk_A 213 RERLFAMK----RGAILLNTARGAL 233 (311)
T ss_dssp HHHHTTSC----TTCEEEECSCGGG
T ss_pred HHHHhhCC----CCcEEEECCCCCc
Confidence 88888883 5678888887443
No 135
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=78.62 E-value=8.1 Score=39.51 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=58.4
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
+|.+.+|.|+|.|..|..+|+.+... |. +++.+|+.. .. ..+... +. ...+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~----g~-~~~~ 193 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF-----GV-------KLYYWSRHR---------KV---NVEKEL----KA-RYMD 193 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC---------CH---HHHHHH----TE-EECC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------ch---hhhhhc----Cc-eecC
Confidence 45559999999999999999987543 43 688888741 11 011110 00 1136
Q ss_pred HHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 400 LLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
|.|+++. .|+++=.-. ..+.++++.++.|. +. ++.-.|.
T Consensus 194 l~e~l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk----~g-ilin~sr 236 (333)
T 2d0i_A 194 IDELLEK--SDIVILALPLTRDTYHIINEERVKKLE----GK-YLVNIGR 236 (333)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTSBCHHHHHHTB----TC-EEEECSC
T ss_pred HHHHHhh--CCEEEEcCCCChHHHHHhCHHHHhhCC----CC-EEEECCC
Confidence 8888887 898773321 13578888899883 35 7777774
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=78.56 E-value=4.9 Score=40.45 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=57.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccC-CcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-DFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~-~~~~~~~~~~L~e 402 (584)
.+|.|+|+|..|..++..+... .|. ++++++|+. .+..+.|++... .. ....++.|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----------~~~~~~l~~~~~~~~---~~~~~~~e 192 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----------KENAEKFADTVQGEV---RVCSSVQE 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----------HHHHHHHHHHSSSCC---EECSSHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----------HHHHHHHHHHhhCCe---EEeCCHHH
Confidence 7999999999999998877653 243 478888873 111122332211 00 12367999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCH
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTA 454 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN--Pt~~aE~tp 454 (584)
+++. +|++|=+... +++++.. +...+.-+|+.+|. |.. .|+.+
T Consensus 193 ~v~~--aDiVi~atp~----~~~v~~~--~~l~~g~~vi~~g~~~p~~-~el~~ 237 (312)
T 2i99_A 193 AVAG--ADVIITVTLA----TEPILFG--EWVKPGAHINAVGASRPDW-RELDD 237 (312)
T ss_dssp HHTT--CSEEEECCCC----SSCCBCG--GGSCTTCEEEECCCCSTTC-CSBCH
T ss_pred HHhc--CCEEEEEeCC----CCcccCH--HHcCCCcEEEeCCCCCCCc-eeccH
Confidence 9987 8988844321 1333321 01234568888753 433 46554
No 137
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.54 E-value=1.6 Score=41.44 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=56.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEE-EecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~l-vDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|..|..+|..+... |. ++++ +|++ .+.+....+.+-- ....+..|
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~------~~~~~~l~~~~g~--------~~~~~~~~ 77 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG------PASLSSVTDRFGA--------SVKAVELK 77 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC------GGGGHHHHHHHTT--------TEEECCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC------HHHHHHHHHHhCC--------CcccChHH
Confidence 5899999999999999887653 43 3554 5542 1112221111110 01123456
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. +|++| ++. +....+++++.++. .+..+|+.++||.+
T Consensus 78 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~--~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 78 DALQ--ADVVI-LAV-PYDSIADIVTQVSD--WGGQIVVDASNAID 117 (220)
T ss_dssp HHTT--SSEEE-EES-CGGGHHHHHTTCSC--CTTCEEEECCCCBC
T ss_pred HHhc--CCEEE-EeC-ChHHHHHHHHHhhc--cCCCEEEEcCCCCC
Confidence 6765 78877 333 44456788887743 34569999999984
No 138
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=78.45 E-value=14 Score=37.22 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=93.7
Q ss_pred CCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCC
Q 007939 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (584)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ... .++ ...
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~-----~~~---------~~~ 165 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSSV------DQN-----VDV---------ISE 165 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSCC------CTT-----CSE---------ECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecccc------ccc-----ccc---------ccC
Confidence 445559999999999999999998765 43 6888887521 111 011 124
Q ss_pred CHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCC
Q 007939 399 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 474 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~ 474 (584)
+|.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.=--|.
T Consensus 166 ~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~ 237 (290)
T 3gvx_A 166 SPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR----KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWW 237 (290)
T ss_dssp SHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC----TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCT
T ss_pred ChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh----cCceEEEeehhcccCCcchhhhhh--hccceEEeecccc
Confidence 79999987 88877322 124778999999983 577888777644422333334443 3433222111111
Q ss_pred ccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007939 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (584)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v~ 527 (584)
+ +- . ..-=+..|+.+-|=++= .....-.+.|...+++-|.....
T Consensus 238 ~-EP--~--~pL~~~~nvilTPHiag----~~t~e~~~~~~~~~~~ni~~~~~ 281 (290)
T 3gvx_A 238 N-EP--E--ITETNLRNAILSPHVAG----GMSGEIMDIAIQLAFENVRNFFE 281 (290)
T ss_dssp T-TT--S--CCSCCCSSEEECCSCSS----CBTTBCCHHHHHHHHHHHHHHTC
T ss_pred C-Cc--c--cchhhhhhhhcCccccC----CccchHHHHHHHHHHHHHHhhhc
Confidence 0 00 0 11123457777776641 12234556777777777766654
No 139
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.42 E-value=2.1 Score=41.86 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=25.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999988764 243 57888864
No 140
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=78.39 E-value=5.2 Score=41.36 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=66.0
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccc
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA 385 (584)
+.+++.... +... .++.|+|+|..|-.++..+... .+. ++++++|+. .+ ......+.|.
T Consensus 117 s~laa~~la--~~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~--~a~~la~~~~ 175 (350)
T 1x7d_A 117 SLMAAQALA--RPNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL--ATAKLIANLK 175 (350)
T ss_dssp HHHHHHHHS--CTTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH--HHHHHHHHHT
T ss_pred HHHHHHHhc--cccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH--HHHHHHHHHH
Confidence 445555442 2345 7999999999998887766542 233 578888873 11 1111222221
Q ss_pred cccCCcCCcccCCCHHHHhcccCCcEEEeecCCC---CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHH
Q 007939 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG---GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAAD 456 (584)
Q Consensus 386 ~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~~~---g~Fteevv~~M~~~~~erPIIFaLSN--Pt~~aE~tped 456 (584)
.. .... .....++.|+++. .|++|=++..+ -.|+.++ ..+.=.|+.++. |. +.|+.++-
T Consensus 176 ~~-~g~~-~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~-------l~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 176 EY-SGLT-IRRASSVAEAVKG--VDIITTVTADKAYATIITPDM-------LEPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp TC-TTCE-EEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGG-------CCTTCEEEECSCCBTT-BEEECHHH
T ss_pred hc-cCce-EEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHH-------cCCCCEEEECCCCCCC-ceeeCHHH
Confidence 10 0000 0124679999987 89998665432 1233322 223447888875 65 56887653
No 141
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=78.37 E-value=2 Score=45.72 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=77.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHH-HcCCChhhhcCcEEEEecCcccccCCCC-CChhhhccccccCCcCCcccCCCHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAAR-MAGNNDAFARNKFFLLDKDGLITKERKN-LDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~-~~Gls~eeA~~~i~lvDs~GLi~~~r~~-l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
.||.|+|||+. .+..++..+.. ..++. -..|+|+|.+- +|-. .......+++....+ ....++.
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v---~~t~d~~ 68 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKV---LISDTFE 68 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEE---EECSSHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEE---EEeCCHH
Confidence 69999999994 66665554552 24552 25799999742 1100 011111111111111 1236788
Q ss_pred HHhcccCCcEEEeecCCCC---------------CC-------------------CHHHHHHhhhcCCCCCeEEecCCCC
Q 007939 402 EVVRKVKPHVLLGLSGVGG---------------VF-------------------NEEVLKAMRESDSVKPAIFAMSNPT 447 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~g---------------~F-------------------teevv~~M~~~~~erPIIFaLSNPt 447 (584)
++++. .|++|=..++++ .+ =.++++.|.+ +| .-+|+-.|||.
T Consensus 69 ~al~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~-~~-~A~lin~TNPv 144 (417)
T 1up7_A 69 GAVVD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRK-TS-NATIVNFTNPS 144 (417)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-TT-CCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHH-HC-CEEEEEeCChH
Confidence 99998 999986666543 21 2588899964 99 99999999998
Q ss_pred CccCCCHHHHhcccCCcEEEEeC
Q 007939 448 MNAECTAADAFKHAGENIVFASG 470 (584)
Q Consensus 448 ~~aE~tpeda~~wT~Grai~AsG 470 (584)
. +..+-+++.+.-.-+|.+|
T Consensus 145 d---i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 145 G---HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp H---HHHHHHHHTTCCSSEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 5 4555566777443566665
No 142
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=78.27 E-value=13 Score=38.61 Aligned_cols=134 Identities=14% Similarity=0.207 Sum_probs=85.1
Q ss_pred cCccccCc---chhHHHHHHHHHHHHHH----------hCC-------CCCCCCCceEEEeCcchhhHHHHHHHHHHHHH
Q 007939 289 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (584)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~----------~g~-------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~ 348 (584)
+.+.|--- +.+|=-+++-+|+..|. .|. .-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 55555422 34555678888887762 221 12345559999999999999999988754
Q ss_pred HcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007939 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (584)
Q Consensus 349 ~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~----~~g~Fte 424 (584)
|+ +++.+|+.. .+.....+ ...+|.|+++. .|+++=.-- ..+.|++
T Consensus 171 --G~-------~V~~~d~~~---------~~~~~~~~----------~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAY---------NPEFEPFL----------TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSC---------CGGGTTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCCh---------hhhhhccc----------cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 43 688888852 11000000 12479999988 899884422 2478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007939 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (584)
Q Consensus 425 evv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~ 459 (584)
+.+..|. +..++.=.|.-..--|---.+|++
T Consensus 221 ~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 221 KQLKEMK----KSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp HHHHHSC----TTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCC----CCcEEEECCCChhhhHHHHHHHHH
Confidence 9999994 577888777644433333334443
No 143
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=78.26 E-value=2.2 Score=41.94 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... | .+++++|+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999988764 4 258888874
No 144
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=78.17 E-value=19 Score=37.15 Aligned_cols=218 Identities=16% Similarity=0.135 Sum_probs=125.8
Q ss_pred HHCCCe-eeEeccCCCChHHHHHHHHhhccCccccCc---chhHHHHHHHHHHHHHHh---------CCC----------
Q 007939 261 ARWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GLS---------- 317 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nAf~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~~---------- 317 (584)
...|+. .|+.--.+..|- .+-.--+.-+.+.|--- +.+|=-+++.+|+..|.. |.-
T Consensus 81 ~~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 159 (347)
T 1mx3_A 81 EKFKALRIIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREV 159 (347)
T ss_dssp TTCSSCCEEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred hhCCCCCEEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccc
Confidence 345776 888888777763 22112233477776433 445566889999988732 210
Q ss_pred ---CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCc
Q 007939 318 ---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (584)
Q Consensus 318 ---l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~ 394 (584)
..+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.- .. .....+ . .
T Consensus 160 ~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~~----~~~~~~---g-----~ 211 (347)
T 1mx3_A 160 ASGAARIRGETLGIIGLGRVGQAVALRAKAF-----GF-------NVLFYDPYL----SD----GVERAL---G-----L 211 (347)
T ss_dssp TTTCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS----CT----THHHHH---T-----C
T ss_pred ccCccCCCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc----ch----hhHhhc---C-----C
Confidence 1355669999999999999999987653 43 588888641 10 000111 0 0
Q ss_pred ccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE--
Q 007939 395 REGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-- 468 (584)
Q Consensus 395 ~~~~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A-- 468 (584)
....+|.|+++. .|+++=.- ...+.++++.++.|. +.-++.=.|+=..--|..-.+|++ +|+.--|
T Consensus 212 ~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~l 283 (347)
T 1mx3_A 212 QRVSTLQDLLFH--SDCVTLHCGLNEHNHHLINDFTVKQMR----QGAFLVNTARGGLVDEKALAQALK--EGRIRGAAL 283 (347)
T ss_dssp EECSSHHHHHHH--CSEEEECCCCCTTCTTSBSHHHHTTSC----TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEE
T ss_pred eecCCHHHHHhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC----CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEE
Confidence 012468899887 88877432 224678899998883 466888888755433443445544 4554433
Q ss_pred ---eCCCCCccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007939 469 ---SGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (584)
Q Consensus 469 ---sGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v 526 (584)
..-|+++ . +. .-=..+|+.+-|=++- -.......|...+++-+.+..
T Consensus 284 DV~~~EP~~~---~-~~--~L~~~~nvi~tPHia~-----~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 284 DVHESEPFSF---S-QG--PLKDAPNLICTPHAAW-----YSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp SCCSSSSCCT---T-SS--TTTTCSSEEECSSCTT-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCCCC---C-Cc--hHHhCCCEEEEchHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 2222210 0 11 0124689999997763 222223455555666665554
No 145
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=78.15 E-value=6.4 Score=40.26 Aligned_cols=161 Identities=15% Similarity=0.106 Sum_probs=94.4
Q ss_pred eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh---------CC-------CCCCCCCceE
Q 007939 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-------SLTDFADQKI 326 (584)
Q Consensus 267 lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~-------~l~dl~~~ri 326 (584)
.|+.--.+..|- . ++..+ .-+.+.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.++
T Consensus 72 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 149 (331)
T 1xdw_A 72 YILTRTAGTDHI-D-KEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTV 149 (331)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEE
T ss_pred EEEEcccccccc-C-HHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEE
Confidence 555555554442 1 12222 3366666432 234555788888887721 21 1134556999
Q ss_pred EEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcc
Q 007939 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRK 406 (584)
Q Consensus 327 v~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~ 406 (584)
.|+|.|..|..+|+.+... |+ +++.+|+.. .. .+. .++ ...+|.|+++.
T Consensus 150 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~~~----~~~----------~~~~l~ell~~ 198 (331)
T 1xdw_A 150 GVVGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-GIE----DYC----------TQVSLDEVLEK 198 (331)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-SCT----TTC----------EECCHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-HHH----hcc----------ccCCHHHHHhh
Confidence 9999999999999988754 43 588888742 11 110 111 12368999987
Q ss_pred cCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 407 VKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 407 vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
.|+++=.- ...+.++++.++.|. +.-++.=.|.-..--|-.-.+|++ +|+.--|
T Consensus 199 --aDvV~~~~p~t~~t~~li~~~~l~~mk----~ga~lin~srg~~vd~~aL~~aL~--~g~i~gA 256 (331)
T 1xdw_A 199 --SDIITIHAPYIKENGAVVTRDFLKKMK----DGAILVNCARGQLVDTEAVIEAVE--SGKLGGY 256 (331)
T ss_dssp --CSEEEECCCCCTTTCCSBCHHHHHTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred --CCEEEEecCCchHHHHHhCHHHHhhCC----CCcEEEECCCcccccHHHHHHHHH--hCCceEE
Confidence 89888531 224789999999993 466888888533322222223333 5555434
No 146
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=78.12 E-value=2 Score=41.93 Aligned_cols=47 Identities=28% Similarity=0.516 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.|++.+++..+.+ |.+ +++|+|+|.+|..+|..+.. .|. +++++|+.
T Consensus 102 ~g~~~~l~~~~~~---l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~ 148 (263)
T 2d5c_A 102 PGFLEALKAGGIP---LKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT 148 (263)
T ss_dssp HHHHHHHHHTTCC---CCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred HHHHHHHHHhCCC---CCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 4788888877754 556 99999999999888877654 342 58888874
No 147
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.00 E-value=1.5 Score=44.50 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.3
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..||||+|+|.||+..|..|... |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 47999999999999999988653 221 268888875
No 148
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.61 E-value=7.1 Score=39.82 Aligned_cols=148 Identities=20% Similarity=0.208 Sum_probs=91.0
Q ss_pred HHCCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHh-----------------CC-C
Q 007939 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ-----------------GL-S 317 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~-----------------g~-~ 317 (584)
...|+. .|+.--.+..|- .+ +..+ .-+.+.|--- +.+|=-+++.+|+..|.. +. +
T Consensus 63 ~~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 140 (334)
T 2dbq_A 63 ENAPKLRIVANYAVGYDNI-DI-EEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP 140 (334)
T ss_dssp HTCTTCCEEEESSSCCTTB-CH-HHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCT
T ss_pred hhCCCceEEEECCcccccc-cH-HHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccc
Confidence 346776 777666666652 22 2333 3477777543 334445789999887732 10 0
Q ss_pred ----CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCC
Q 007939 318 ----LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (584)
Q Consensus 318 ----l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~ 393 (584)
-.+|.+.+|.|+|.|..|..+|..+... |. +++.+|+.. .. ..+....
T Consensus 141 ~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g---- 192 (334)
T 2dbq_A 141 KWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRTR---------KE---EVERELN---- 192 (334)
T ss_dssp TTTCCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHHC----
T ss_pred ccccccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCCc---------ch---hhHhhcC----
Confidence 1345559999999999999999988653 43 688888741 11 0111100
Q ss_pred cccCCCHHHHhcccCCcEEEeec-CC---CCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 394 LREGASLLEVVRKVKPHVLLGLS-GV---GGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 394 ~~~~~~L~evV~~vkptvLIG~S-~~---~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
. ...++.|+++. .|+++=.- .. .+.++++++..|. +..+|.-.|.
T Consensus 193 ~-~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk----~~ailIn~sr 241 (334)
T 2dbq_A 193 A-EFKPLEDLLRE--SDFVVLAVPLTRETYHLINEERLKLMK----KTAILINIAR 241 (334)
T ss_dssp C-EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTCEEEECSC
T ss_pred c-ccCCHHHHHhh--CCEEEECCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 0 12468898887 88876332 21 2678888888883 4567776664
No 149
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=77.14 E-value=1.3 Score=45.91 Aligned_cols=37 Identities=22% Similarity=0.406 Sum_probs=31.6
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|+. .||+++|+|..|.-||+.|+.+.+ ++|.++|.+
T Consensus 33 ~L~~---~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRA---SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHE 69 (346)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECC
Confidence 4555 899999999999999999988744 689999976
No 150
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=77.12 E-value=2.8 Score=44.96 Aligned_cols=183 Identities=15% Similarity=0.190 Sum_probs=101.1
Q ss_pred ccccccCChhhHHHHHhcCCCCCceEEEEec--------------------CceeeccCCCCCCcccccchhhhhhhh--
Q 007939 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (584)
Q Consensus 149 Glyis~~D~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~Gm~I~iGKl~LY~a-- 206 (584)
|.|++..|...+..+|+.. +++++++.| |+.+=-+-++|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777777888888864 789998854 444555555565555666666654432
Q ss_pred ---hcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCChHHHHHH
Q 007939 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLE 283 (584)
Q Consensus 207 ---~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ 283 (584)
=-|+. .+-+ |..+|+ +-.|+|+..+.+.+-. ..| +.++
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~---~~~--------~~i~ 294 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN---PVP--------DRYK 294 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS---CCC--------HHHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC---chH--------HHHH
Confidence 13554 2211 111221 2368888888887632 111 2344
Q ss_pred HHhhccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEE
Q 007939 284 RYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (584)
Q Consensus 284 ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~l 363 (584)
+.|.+ ++.++.-....|.. .|++|+|.+.-..|+++.|.+ .|+.. +.+
T Consensus 295 ~er~r------------------~~~~~~d~~~~l~G---krv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~ 342 (458)
T 3pdi_B 295 RQRAQ------------------LQDAMLDTHFMLSS---ARTAIAADPDLLLGFDALLRS-----MGAHT------VAA 342 (458)
T ss_dssp HHHHH------------------HHHHHHHHHHHHTT---CEEEEECCHHHHHHHHHHHHT-----TTCEE------EEE
T ss_pred HHHHH------------------HHHHHHHHHHhcCC---CEEEEECCcHHHHHHHHHHHH-----CCCEE------EEE
Confidence 54443 12222222233455 899999999999999998843 46632 222
Q ss_pred EecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007939 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (584)
Q Consensus 364 vDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~ 417 (584)
.-.. ..+.+... +. .++. ..+...+++.++..+||.+||-|-
T Consensus 343 ~~~~-----~~~~~~~~--~~----~~v~-~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 343 VVPA-----RAAALVDS--PL----PSVR-VGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp EESS-----CCSCCTTT--TS----SCEE-ESHHHHHHHHHHHHTCSEEEECTT
T ss_pred EECC-----CChhhhhC--cc----CcEE-eCCHHHHHHHHHhcCCCEEEEChh
Confidence 2111 11111111 00 0000 012234788899999999999663
No 151
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=77.08 E-value=9.3 Score=39.28 Aligned_cols=167 Identities=14% Similarity=0.129 Sum_probs=99.5
Q ss_pred HCCCe-eeEeccCCCChHHHHHHHH-hhccCcccc-Cc--chhHHHHHHHHHHHHHHh---------C-------CCCCC
Q 007939 262 RWPKA-IVQFEDFQMKWAFETLERY-RKRFCMFND-DI--QGTAGVALAGLLGTVRAQ---------G-------LSLTD 320 (584)
Q Consensus 262 ~~P~~-lIqfEDf~~~nAf~lL~ry-r~~~~~FND-Di--QGTaaV~LAgll~Alr~~---------g-------~~l~d 320 (584)
..|+. .|+.--.+..|- .+ +.. +.-+.+.|- +. ..+|=-+++-+|+..|.. | ..-.+
T Consensus 61 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 138 (334)
T 2pi1_A 61 KMPRLKLIHTRSVGFDHI-DL-DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARE 138 (334)
T ss_dssp TCTTCCEEEESSSCCTTB-CH-HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCC
T ss_pred hCCCCeEEEECCcccccc-CH-HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCcccee
Confidence 45554 555555554442 22 222 233666554 22 235556788888877631 1 01124
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.. .+... ... ....+|
T Consensus 139 l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~~---~~g------~~~~~l 188 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK---------REDLK---EKG------CVYTSL 188 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHHH---HTT------CEECCH
T ss_pred ccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEEEECCCc---------chhhH---hcC------ceecCH
Confidence 4459999999999999999988754 43 688888742 11110 100 012459
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 401 ~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
.|+++. .|+++=.- ...+.|+++.++.|. +.-|+.=.|.-..--|-.-.+|++ +|+.-.|
T Consensus 189 ~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA 252 (334)
T 2pi1_A 189 DELLKE--SDVISLHVPYTKETHHMINEERISLMK----DGVYLINTARGKVVDTDALYRAYQ--RGKFSGL 252 (334)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCEEEE
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 999987 89887431 234789999999993 567888787755433444445544 5665543
No 152
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=77.01 E-value=1.3 Score=44.94 Aligned_cols=105 Identities=20% Similarity=0.332 Sum_probs=59.9
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+-=-.++. .+|.+...++..+. .. ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIARTPGKPQGEALDLAHAAAELGVDI-RI---SGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSSTTHHHHHHHHHHHHHHHHTCCC-CE---EEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCChhhHHHHHHHHHHhhhhcCCCe-EE---EECCCH-HH
Confidence 689999999999999766542 55 2699999851000000 01211111111110 01 111344 67
Q ss_pred hcccCCcEEEeecCCCC---C-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKVKPHVLLGLSGVGG---V-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g---~-----------Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++. .|++|=+.+.+. - .-+++++.|.+ +++.-+|+-.|||..
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKA-YAKDAIVVITTNPVD 120 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCchH
Confidence 777 899885544443 1 13577777754 678877777899985
No 153
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=76.58 E-value=6 Score=40.69 Aligned_cols=178 Identities=13% Similarity=0.215 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHHh---------C----CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEe
Q 007939 299 TAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (584)
Q Consensus 299 TaaV~LAgll~Alr~~---------g----~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (584)
+|=-+++.+|+..|.. | ....+|.+.+|.|+|.|..|..+|+.+..+ |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3445677777766631 1 122344459999999999999999998654 43 688888
Q ss_pred cCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEE
Q 007939 366 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIF 441 (584)
Q Consensus 366 s~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIF 441 (584)
+.. +. .. .+... ....+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.
T Consensus 171 r~~---~~---~~----~~~~~-------~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk----~gailI 227 (324)
T 3hg7_A 171 RSG---RE---RA----GFDQV-------YQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK----PGAILF 227 (324)
T ss_dssp SSC---CC---CT----TCSEE-------ECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC----TTCEEE
T ss_pred CCh---HH---hh----hhhcc-------cccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC----CCcEEE
Confidence 754 11 11 11110 013569999987 88887431 124778888888883 567888
Q ss_pred ecCCCCCccCCCHHHHhcccCCcEEEEe-----CCCCCccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHH
Q 007939 442 AMSNPTMNAECTAADAFKHAGENIVFAS-----GSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQ 516 (584)
Q Consensus 442 aLSNPt~~aE~tpeda~~wT~Grai~As-----GSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~ 516 (584)
=.|.-..--|---.+|++ +|+.-.|. .-|.++- . .-=+..|+.+-|=++- .+ ....|..
T Consensus 228 N~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~-----~--pL~~~~nvilTPHia~------~t-~~~~~~~ 291 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD-----S--PLWGQPNLIITPHNSA------YS-FPDDVAQ 291 (324)
T ss_dssp ECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT-----C--TTTTCTTEEECCSCSS------CC-CHHHHHH
T ss_pred ECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC-----C--hhhcCCCEEEeCCCcc------cc-HHHHHHH
Confidence 777654433333334443 45432221 1121110 0 0113457777776642 22 1256777
Q ss_pred HHHHHHhccCC
Q 007939 517 QAAECLASYMT 527 (584)
Q Consensus 517 aAA~alA~~v~ 527 (584)
.+++-|.....
T Consensus 292 ~~~~nl~~~~~ 302 (324)
T 3hg7_A 292 IFVRNYIRFID 302 (324)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 77777766654
No 154
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=76.42 E-value=4.5 Score=38.17 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... | .+++++|+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 8999999999999999888653 4 268888763
No 155
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=76.37 E-value=5.8 Score=41.93 Aligned_cols=185 Identities=18% Similarity=0.148 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHHHHHHh---------C--------CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCc
Q 007939 298 GTAGVALAGLLGTVRAQ---------G--------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNK 360 (584)
Q Consensus 298 GTaaV~LAgll~Alr~~---------g--------~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~ 360 (584)
.+|=-+++-+|+..|.. | ....+|.+.++.|+|.|..|..+|+.+... |+ +
T Consensus 149 ~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~ 216 (393)
T 2nac_A 149 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------H 216 (393)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------E
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------E
Confidence 34555677777777632 0 011234449999999999999999987653 43 5
Q ss_pred EEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCC
Q 007939 361 FFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSV 436 (584)
Q Consensus 361 i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~e 436 (584)
++.+|+... .. ..++... .....+|.|+++. .|+++=.- ...+.|+++.++.|. +
T Consensus 217 V~~~d~~~~--------~~---~~~~~~G----~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~ 275 (393)
T 2nac_A 217 LHYTDRHRL--------PE---SVEKELN----LTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK----R 275 (393)
T ss_dssp EEEECSSCC--------CH---HHHHHHT----CEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC----T
T ss_pred EEEEcCCcc--------ch---hhHhhcC----ceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC----C
Confidence 888886411 11 1111100 0012468999987 89887432 224789999999993 4
Q ss_pred CCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCC--ccccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHH
Q 007939 437 KPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE--NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGM 514 (584)
Q Consensus 437 rPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~--pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m 514 (584)
.-+|.=.|.-..--|-.-.+|++ +|+.--|.--=|. |..- .. .-=+..|+.+-|=++-....+ ...|
T Consensus 276 gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP~~~--~~--pL~~~~nvilTPHia~~T~e~-----~~~~ 344 (393)
T 2nac_A 276 GAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQPAPK--DH--PWRTMPYNGMTPHISGTTLTA-----QARY 344 (393)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSSCCT--TC--GGGTSTTBCCCCSCTTCSHHH-----HHHH
T ss_pred CCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCCCCC--CC--hhHcCCCEEECCCCCcCcHHH-----HHHH
Confidence 66888788643322322334444 5664433211111 1100 11 111345788888775322211 2234
Q ss_pred HHHHHHHHhccC
Q 007939 515 LQQAAECLASYM 526 (584)
Q Consensus 515 ~~aAA~alA~~v 526 (584)
...+++-|.+..
T Consensus 345 ~~~~~~nl~~~~ 356 (393)
T 2nac_A 345 AAGTREILECFF 356 (393)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445555555554
No 156
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=76.06 E-value=2 Score=43.74 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=62.9
Q ss_pred ceEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccC--CcCCcccCCCH
Q 007939 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 400 (584)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~--~~~~~~~~~~L 400 (584)
.||+|+| +|..|..++..|.. .|+- ..++++|.+-- . .....+.+... .+.......++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~~-----~ev~l~Di~~~----~----~~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPLV-----SVLHLYDVVNA----P----GVTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTTE-----EEEEEEESSSH----H----HHHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEeCCCc----H----hHHHHhhcccccceEEEEeCCCCH
Confidence 5899999 79999988777643 3431 36999996421 0 00001111100 00000012368
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~---g-----------~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.++++. .|++|=+.+.+ | ..++++++.|.+ ++.+.+|+--|||..
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~SNPv~ 129 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLISNPVN 129 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCchH
Confidence 889988 89888555443 2 235677788754 677889999999986
No 157
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.03 E-value=2.8 Score=42.11 Aligned_cols=32 Identities=28% Similarity=0.515 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 6999999999999999988763 43 58888864
No 158
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=75.85 E-value=2.3 Score=41.51 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=25.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999887652 42 58888864
No 159
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=75.65 E-value=12 Score=38.32 Aligned_cols=142 Identities=18% Similarity=0.191 Sum_probs=87.0
Q ss_pred ccCccccCcc---hhHHHHHHHHHHHHHHh---------C-------CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHH
Q 007939 288 RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G-------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (584)
Q Consensus 288 ~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g-------~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~ 348 (584)
-+.+.|---. .+|=-+++.+|+..|.. | ..-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 91 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 167 (333)
T 1dxy_A 91 GIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF--- 167 (333)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC---
Confidence 3666664322 34445788888876621 1 112345559999999999999999988654
Q ss_pred HcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007939 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (584)
Q Consensus 349 ~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~----~~g~Fte 424 (584)
|+ +++.+|+..- . ... .++ ...+|.|+++. .|+++=.-- ..+.|++
T Consensus 168 --G~-------~V~~~d~~~~----~-~~~----~~~----------~~~~l~ell~~--aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 168 --GA-------KVIAYDPYPM----K-GDH----PDF----------DYVSLEDLFKQ--SDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp --TC-------EEEEECSSCC----S-SCC----TTC----------EECCHHHHHHH--CSEEEECCCCCGGGTTSBCH
T ss_pred --CC-------EEEEECCCcc----h-hhH----hcc----------ccCCHHHHHhc--CCEEEEcCCCchhHHHHhCH
Confidence 43 5888887521 1 111 111 12368899987 898874421 2367999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 425 evv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
+.++.|. +.-++.=.|.-..--|-.-.+|++ +|+.--|
T Consensus 218 ~~l~~mk----~ga~lIn~srg~~vd~~aL~~aL~--~g~i~gA 255 (333)
T 1dxy_A 218 AAFNLMK----PGAIVINTARPNLIDTQAMLSNLK--SGKLAGV 255 (333)
T ss_dssp HHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEEEE
T ss_pred HHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCccEE
Confidence 9999993 466888777754433333334444 5655444
No 160
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=75.55 E-value=0.81 Score=49.21 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHCCCeeeEeccCCCChHHHHHHHHhhc-cCcc--ccCcchhHHHHHHHHHHHHHHhCC-----CCCCCC
Q 007939 251 IVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDFA 322 (584)
Q Consensus 251 ~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ryr~~-~~~F--NDDiQGTaaV~LAgll~Alr~~g~-----~l~dl~ 322 (584)
.+..+++.+...+|++-+.--|. ..-.++-++|.-. +|++ |+..-+.+.....-++..+..... ++.+-.
T Consensus 134 ~~~~~l~~~a~~~~~v~~~~vd~--~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 134 DVVQALNLMAVLNPRIKHTAIDG--GTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEET--TTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHHhHcCceEEEEEec--hhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 35556666666778543332243 3445677888643 5643 666667777766667665433210 111111
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 2689999999999999887654 354 57777753
No 161
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=75.35 E-value=11 Score=38.54 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=88.1
Q ss_pred ccCccccCc---chhHHHHHHHHHHHHHHh---------C------CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHH
Q 007939 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (584)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g------~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (584)
-+.+.|--- +.+|=-+++.+|+..|.. | ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 168 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF---- 168 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 466666432 234555788888887731 2 111345569999999999999999988653
Q ss_pred cCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCHH
Q 007939 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEE 425 (584)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~----~~g~Ftee 425 (584)
|+ +++.+|+.. ......++.. ..+|.|+++. .|+++=.-. ..+.++++
T Consensus 169 -G~-------~V~~~d~~~---------~~~~~~~~~~---------~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 169 -GA-------KVITYDIFR---------NPELEKKGYY---------VDSLDDLYKQ--ADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp -TC-------EEEEECSSC---------CHHHHHTTCB---------CSCHHHHHHH--CSEEEECSCCCGGGTTCBSHH
T ss_pred -CC-------EEEEECCCc---------chhHHhhCee---------cCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHH
Confidence 43 688888742 1100112111 1368899987 888874421 23678899
Q ss_pred HHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 426 VLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 426 vv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
.++.|. +..++.-.|.-..--|-.-.+|.+ +|+.--|
T Consensus 221 ~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i~gA 257 (333)
T 1j4a_A 221 SIAKMK----QDVVIVNVSRGPLVDTDAVIRGLD--SGKIFGY 257 (333)
T ss_dssp HHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 999993 467888888754433433334444 4554433
No 162
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=74.93 E-value=3.4 Score=40.92 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999988764 343 58888864
No 163
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.91 E-value=3.5 Score=40.91 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999887653 43 58888874
No 164
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=74.91 E-value=3.2 Score=41.99 Aligned_cols=105 Identities=18% Similarity=0.282 Sum_probs=58.7
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|.++|..+... |.. ..++++|.+-=-.+. ..++.+. .++.... .. ...+ .++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~-~i----~~~d-~~~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVDKKRAEGDALDLIHG-TPFTRRA-NI----YAGD-YAD 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSCCC-EE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHHHHHhh-hhhcCCc-EE----EeCC-HHH
Confidence 799999999999998887653 431 379999975100000 0001100 0111110 00 0123 345
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007939 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~~ 449 (584)
++. .|++|=+...+.. .-+++++.|.+ +++.-+|+-.|||...
T Consensus 65 ~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 65 LKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK-YAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcHHH
Confidence 655 8887744333331 12688888854 5677788889999864
No 165
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=74.86 E-value=9.9 Score=38.99 Aligned_cols=220 Identities=12% Similarity=0.178 Sum_probs=121.8
Q ss_pred HHCCCe-eeEeccCCCChHHHHHHHHh-hccCccccCc---chhHHHHHHHHHHHHHHhC--------------C-CCCC
Q 007939 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQG--------------L-SLTD 320 (584)
Q Consensus 261 ~~~P~~-lIqfEDf~~~nAf~lL~ryr-~~~~~FNDDi---QGTaaV~LAgll~Alr~~g--------------~-~l~d 320 (584)
...|+. .|+.-=.+..| ..+ +..+ ..+++.|--- +.+|=-+++.+|+..|... . .-.+
T Consensus 57 ~~~~~Lk~I~~~~~G~d~-id~-~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~ 134 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDY-LPL-KALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTST 134 (324)
T ss_dssp STTCCCCEEECSSSCCTT-SCH-HHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCC
T ss_pred hhCCCceEEEECCccccc-cCH-HHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCcc
Confidence 345765 66655555544 222 3333 3477777653 3345557888888775310 0 1234
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
|.+.++.|+|.|..|-.+|+.+... |+ +++.+|+..- ..+.+.. .+ ...+|
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~---~~~~~~~---~~-----------~~~~l 185 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL-----GM-------HVIGVNTTGH---PADHFHE---TV-----------AFTAT 185 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSCC---CCTTCSE---EE-----------EGGGC
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC-----CC-------EEEEECCCcc---hhHhHhh---cc-----------ccCCH
Confidence 4459999999999999999988654 44 6888887521 0011110 01 12468
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCcc
Q 007939 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (584)
Q Consensus 401 ~evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv 476 (584)
.|+++. .|+++=.- ...+.|+++.+..|. +..++.=.|.-..--|-.-.+|++ +|+.-.|.=-=|.+-
T Consensus 186 ~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~E 257 (324)
T 3evt_A 186 ADALAT--ANFIVNALPLTPTTHHLFSTELFQQTK----QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPE 257 (324)
T ss_dssp HHHHHH--CSEEEECCCCCGGGTTCBSHHHHHTCC----SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSS
T ss_pred HHHHhh--CCEEEEcCCCchHHHHhcCHHHHhcCC----CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCC
Confidence 888887 89887331 124789999999993 567888787754433433444544 455332211011110
Q ss_pred ccCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007939 477 DLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (584)
Q Consensus 477 ~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v 526 (584)
..+.. ..-=+..|+.+-|=++- ....-.+.|...+++-|....
T Consensus 258 Pl~~~--~pL~~~~nvilTPHia~-----~t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 258 PLPTD--HPLWQRDDVLITPHISG-----QIAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp SCCTT--CGGGGCSSEEECCSCTT-----CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCC--ChhhcCCCEEEcCcccc-----ChHHHHHHHHHHHHHHHHHHH
Confidence 00000 01123457777776642 122234566666666666654
No 166
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=74.72 E-value=4 Score=42.05 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=66.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|..+|..|+.. |+- ..+.++|..-=..++- .+|.+. .+|..+.. -..+..+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~------i~~~~~~ 72 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTT-GGGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhh-hhhcCCcE------EEECcHH
Confidence 6999999999999999887763 442 4799999731100000 012221 12322110 0122345
Q ss_pred HhcccCCcEEEeecCCC---C-----CC------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 403 VVRKVKPHVLLGLSGVG---G-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~---g-----~F------teevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
+++. .|++|=+.+.+ | .| -+++++.|.+ +++.-+|+-.|||.. +..+-+++.
T Consensus 73 a~~~--aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvtNPvd---i~t~~~~k~ 138 (326)
T 3vku_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGTT--CSEEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhcC--CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEccCchH---HHHHHHHHh
Confidence 6666 78776443332 2 23 2577788854 899999999999985 444455554
No 167
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=74.58 E-value=1.2 Score=45.03 Aligned_cols=106 Identities=22% Similarity=0.280 Sum_probs=57.8
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCC-CCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~-~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|.++|..+... |+- .+++++|.+-=..+... ++.+....+... ... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~g-----~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~-~~i---~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QLA-----RELVLLDVVEGIPQGKALDMYESGPVGLFD-TKV---TGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEECSSSSHHHHHHHHHHTTHHHHTCC-CEE---EEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCChhHHHHHHHhHHhhhhcccCC-cEE---EECCCHHH-
Confidence 799999999999999876552 221 47999998521000000 011000001001 000 11234544
Q ss_pred hcccCCcEEEeecCCC---CC-------CC----HHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKVKPHVLLGLSGVG---GV-------FN----EEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-------Ft----eevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++. .|++|=+.+.+ |- .| +++.+.|.+ +++.-+|+-+|||-.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSKNPIIIVVSNPLD 122 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCSSCEEEECCSSHH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEcCchH
Confidence 666 88876443322 32 11 466677754 677888888999985
No 168
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.53 E-value=6.4 Score=35.27 Aligned_cols=98 Identities=26% Similarity=0.317 Sum_probs=52.2
Q ss_pred CceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
..+|+|.|| |-.|..+++.|.+ .| .++++++++.-- .+.+......+..- + ..+..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~~---~~~~~~~~~~~~~~--D---~~~~~~~~ 62 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSSR---LPSEGPRPAHVVVG--D---VLQAADVD 62 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGGG---SCSSSCCCSEEEES--C---TTSHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChhh---cccccCCceEEEEe--c---CCCHHHHH
Confidence 378999998 6666666665544 34 368888875210 01110011111111 0 11234578
Q ss_pred HHhcccCCcEEEeecCCCCC---------CCHHHHHHhhhcCCCCCeEEec
Q 007939 402 EVVRKVKPHVLLGLSGVGGV---------FNEEVLKAMRESDSVKPAIFAM 443 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~g~---------Fteevv~~M~~~~~erPIIFaL 443 (584)
++++. +|++|=+.+.... .+..++++|.+ ..-+.|||.=
T Consensus 63 ~~~~~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~v~~S 110 (206)
T 1hdo_A 63 KTVAG--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKA-HGVDKVVACT 110 (206)
T ss_dssp HHHTT--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHH-HTCCEEEEEC
T ss_pred HHHcC--CCEEEECccCCCCCCccchHHHHHHHHHHHHHH-hCCCeEEEEe
Confidence 88876 8999977764321 14566777643 2334466543
No 169
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=74.46 E-value=2.4 Score=41.58 Aligned_cols=93 Identities=10% Similarity=0.133 Sum_probs=55.4
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+ |..|..+|..+.. .|. +++++|+.- +.+. .+.... . ...++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~------~~~~----~~~~~g--~----~~~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP------EGRD----RLQGMG--I----PLTDGDG 63 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH------HHHH----HHHHTT--C----CCCCSSG
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH------HHHH----HHHhcC--C----CcCCHHH
Confidence 38999999 9999999988765 342 688888631 0111 111100 0 0124556
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. +|++| ++..+.. .+++++.+.....+..||.-+|+..+
T Consensus 64 ~~~~--aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 64 WIDE--ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGGT--CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred HhcC--CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCch
Confidence 6665 78877 3333333 57888877543344567777888554
No 170
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=74.38 E-value=1.4 Score=44.74 Aligned_cols=106 Identities=14% Similarity=0.238 Sum_probs=60.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|.++|..+.. .|+- ..|+++|.+--..+.. .++.+. .++... ++ .-..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~-----~~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~--~~---~i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN-----QGIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPK--PV---DIWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSS--CC---EEEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCC--Ce---EEEcCcHH
Confidence 599999999999999876643 2442 4799999852111100 011111 111110 00 00112345
Q ss_pred HhcccCCcEEEeecCCCC--------------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGG--------------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g--------------~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. .|++|=+.+.+. ...+++++.|.+ +++.-++|-.|||-.
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~~iv~tNPv~ 127 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQGLFLVATNPVD 127 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHH-HCCCCEEEEeCCchH
Confidence 6766 888874443332 123567777754 677778888899985
No 171
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=74.08 E-value=3.1 Score=42.14 Aligned_cols=115 Identities=22% Similarity=0.313 Sum_probs=67.3
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|.++|..|... |+- ..+.|+|.+-=..++. -+|.+...+|-.+. .+ ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999887553 432 3799999752111100 01222211121111 01 11234 778
Q ss_pred hcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 404 VRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----F--t----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
++. .|++|=+.+. +|- | | +++++.|.+ +++.-+|+-.|||.. ....-+++.
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvsNPvd---~~t~~~~k~ 131 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVE-NAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT-TSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcch---HHHHHHHHh
Confidence 887 8887744433 332 1 2 456667754 899999999999985 444555554
No 172
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=73.76 E-value=1.9 Score=43.56 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=59.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|.++|..+.. .|+- +++|+|.+-=-.+.. .+|.+...+..... .. ....++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~~------~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KELG------DIVLLDIVEGVPQGKALDLYEASPIEGFDV-RV---TGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEECSSSSHHHHHHHHHHTTHHHHTCCC-CE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCCC------eEEEEeCCccHHHHHHHhHHHhHhhcCCCe-EE---EECCCH-H
Confidence 589999999999999987744 3531 399999741000000 01111110010010 00 112455 6
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~---g~-----------Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. .|++|=+.+.| |- .-+++.+.+.+ +++.-+|+-.|||..
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAP-LSPNAVIIMVNNPLD 123 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGG-GCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEcCCchH
Confidence 7777 89887554433 31 12467777754 678888877899986
No 173
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=73.39 E-value=2.4 Score=42.33 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=57.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|+|+-|..+|..|... | .+++++|+.-+ ..=+ ..+.- .+....-.+....-..++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~---~~~~g~~~~~~~~~~~~~~~ 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKV---FSINGDFTLPHVKGYRAPEE 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEE---EETTCCEEESCCCEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEE---EcCCCeEEEeeceeecCHHH
Confidence 5899999999999999887653 4 35888887531 0000 01100 00000000000001234544
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++ .+|++| ++.. -...+++++.++....+..+|..+.|--.
T Consensus 67 -~~--~~D~vi-lavk-~~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 67 -IG--PMDLVL-VGLK-TFANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp -HC--CCSEEE-ECCC-GGGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred -cC--CCCEEE-EecC-CCCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 44 378776 5543 33457888888654566778888999764
No 174
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=73.23 E-value=8.3 Score=40.82 Aligned_cols=95 Identities=14% Similarity=0.255 Sum_probs=50.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc-------ccccCCC---CCChhhhccccccCCcCC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG-------LITKERK---NLDPAAAPFAKDPGDFMG 393 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G-------Li~~~r~---~l~~~k~~fA~~~~~~~~ 393 (584)
.||.|+|||+=|+.+|..+.+... ..... -+-.=++|..|..= .|...+. .|+..+.| ++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~-~~~~~-~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--------~~ 104 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK-GYPEV-FAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--------DN 104 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH-HCTTT-EEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--------SS
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-Ccccc-CCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--------CC
Confidence 599999999999999999988643 11000 00001467655430 0111111 12222111 00
Q ss_pred cccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007939 394 LREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (584)
Q Consensus 394 ~~~~~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~ 432 (584)
..-..+|.|+++. .|++|= + +|-.|-+++++.+..
T Consensus 105 i~~t~dl~~al~~--ad~ii~-a-vPs~~~r~~l~~l~~ 139 (391)
T 4fgw_A 105 LVANPDLIDSVKD--VDIIVF-N-IPHQFLPRICSQLKG 139 (391)
T ss_dssp EEEESCHHHHHTT--CSEEEE-C-SCGGGHHHHHHHHTT
T ss_pred cEEeCCHHHHHhc--CCEEEE-E-CChhhhHHHHHHhcc
Confidence 1123678888877 666542 1 244567788887754
No 175
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=73.17 E-value=3.2 Score=40.41 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.5
Q ss_pred ceEEEeCcchhhHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (584)
.||.|+|+|..|..+|..+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 489999999999999988765
No 176
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=73.16 E-value=13 Score=38.21 Aligned_cols=112 Identities=16% Similarity=0.191 Sum_probs=67.1
Q ss_pred CCCCceEEEeCcchhhHHHHHHHH-HHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAV-QAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~-~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (584)
+|.+.+|.|+|.|..|..+|+.+. .. |+ +++.+|+..- .....+ .+ . . ....
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~-----G~-------~V~~~d~~~~------~~~~~~-~~--g-~-----~~~~ 212 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGL-----GM-------KLVYYDVAPA------DAETEK-AL--G-A-----ERVD 212 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEECSSCC------CHHHHH-HH--T-C-----EECS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhc-----CC-------EEEEECCCCc------chhhHh-hc--C-c-----EEeC
Confidence 344499999999999999999886 42 43 6888887421 111111 00 0 0 0113
Q ss_pred CHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007939 399 SLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~----~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai 466 (584)
++.|+++. .|+++=.-- ..+.++++.++.|. +..||.-.|.-..--|-.-.+|++ +|+.-
T Consensus 213 ~l~ell~~--aDvVil~vp~~~~t~~li~~~~l~~mk----~gailin~srg~~vd~~aL~~aL~--~~~i~ 276 (348)
T 2w2k_A 213 SLEELARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK----PGSRIVNTARGPVISQDALIAALK--SGKLL 276 (348)
T ss_dssp SHHHHHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSEE
T ss_pred CHHHHhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC----CCCEEEECCCCchhCHHHHHHHHH--hCCce
Confidence 68888887 888774321 23788899999883 456777666643322323334444 56543
No 177
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=73.06 E-value=2.4 Score=42.96 Aligned_cols=113 Identities=19% Similarity=0.233 Sum_probs=63.4
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||+.|..+|-+|+. .++- ..|+|+|.+-=-.++ ..+|.+. .+|.++.. . ...+ .++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-----~~~~-----~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~-v----~~~~-~~a 64 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-----LGVA-----REVVLVDLDRKLAQAHAEDILHA-TPFAHPVW-V----WAGS-YGD 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHTT-GGGSCCCE-E----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHHh-HhhcCCeE-E----EECC-HHH
Confidence 89999999999888776544 2432 479999985200000 0012111 12222110 0 0122 566
Q ss_pred hcccCCcEEEeecC---CCCC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 404 VRKVKPHVLLGLSG---VGGV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 404 V~~vkptvLIG~S~---~~g~-------F----teevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
++. .|++|=+.+ .+|- + -+++++.|.+ ++..-+|+-.|||.. .+.+-+++.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 129 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE-AAPEAVLLVATNPVD---VMTQVAYAL 129 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHH
Confidence 777 888874433 3332 1 2456666643 788899999999985 334445453
No 178
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=72.98 E-value=2 Score=41.55 Aligned_cols=30 Identities=13% Similarity=0.296 Sum_probs=23.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999887743 32 47888864
No 179
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.62 E-value=3.3 Score=41.05 Aligned_cols=49 Identities=20% Similarity=0.214 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
...|++.+++..+.+++. .+++|+|||.+|..+|..+ . +.| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L----~-~~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFEL----A-KDN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHH----T-SSS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHH----H-HCC--------CEEEEECC
Confidence 678899999988888877 9999999985555555444 3 233 58888874
No 180
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=72.19 E-value=6.6 Score=39.00 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.4
Q ss_pred ceEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+| +|..|..+|..+.. .|. +++++|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999988754 343 58888864
No 181
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=72.00 E-value=2 Score=43.19 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|++.+++..| . .+++|+|||.+|.+++..|... | .+|+++++.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt 150 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS 150 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 4666665433 5 8999999998888887776653 4 369988874
No 182
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.97 E-value=2 Score=42.73 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988763 43 57888874
No 183
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=71.46 E-value=2.4 Score=41.93 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=27.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.. .|. .++.++|+..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999988854 353 1699999875
No 184
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=70.93 E-value=18 Score=37.18 Aligned_cols=126 Identities=14% Similarity=0.140 Sum_probs=78.8
Q ss_pred ccCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHH
Q 007939 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (584)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (584)
-+++.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 366666432 334555788888887742 10 01244459999999999999999887643
Q ss_pred cCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 007939 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 425 (584)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Ftee 425 (584)
|. +++.+|+.. ++. .+... + ....+|.|+++. .|+++=.- ...+.|+++
T Consensus 188 -G~-------~V~~~d~~~---------~~~---~~~~~----g-~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 188 -GM-------KTIGYDPII---------SPE---VSASF----G-VQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp -TC-------EEEEECSSS---------CHH---HHHHT----T-CEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHH
T ss_pred -CC-------EEEEECCCc---------chh---hhhhc----C-ceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHH
Confidence 43 588888641 111 11110 0 012479999987 89887432 123678889
Q ss_pred HHHHhhhcCCCCCeEEecCCCCC
Q 007939 426 VLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 426 vv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.++.|. +..++.=.|.-..
T Consensus 241 ~l~~mk----~gailIN~arg~v 259 (335)
T 2g76_A 241 TFAQCK----KGVRVVNCARGGI 259 (335)
T ss_dssp HHTTSC----TTEEEEECSCTTS
T ss_pred HHhhCC----CCcEEEECCCccc
Confidence 998883 4678887887443
No 185
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=70.84 E-value=1.8 Score=46.47 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=29.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 8999999999999999999876 44 689999986
No 186
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=70.70 E-value=2.8 Score=43.04 Aligned_cols=106 Identities=17% Similarity=0.287 Sum_probs=60.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|.++|..|.. .|+. .+.|+|.+-=..++- .+|.+.. .|......+ ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999998887765 3552 599999742111000 0122211 122111111 112344 7
Q ss_pred HhcccCCcEEEeecC---CCCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSG---VGGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~---~~g~-----F--t----eevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+++. .|++|=+.+ .+|- | | +++++.|.+ ++..-+|+-.|||..
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvtNPvd 128 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKK-YAPEAFVICITNPLD 128 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHH-HCCCeEEEecCCCcH
Confidence 7887 888774433 3342 1 2 456666644 788889999999975
No 187
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.43 E-value=6.9 Score=37.92 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=56.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. .+...++.... . .....++.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-----------~~~~~~~~~g~-~-~~~~~~~~~~ 58 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-----------ESISKAVDLGI-I-DEGTTSIAKV 58 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-----------HHHHHHHHTTS-C-SEEESCGGGG
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-----------HHHHHHHHCCC-c-ccccCCHHHH
Confidence 479999999999999988764 3431 3688888741 11111111000 0 0012356677
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++. ++|++| ++. +...++++++.+.....+..||.-+||-..
T Consensus 59 ~~~-~aDvVi-lav-p~~~~~~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 59 EDF-SPDFVM-LSS-PVRTFREIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp GGT-CCSEEE-ECS-CHHHHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred hcC-CCCEEE-EcC-CHHHHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence 761 378877 443 333556777766433345567777777543
No 188
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=70.21 E-value=20 Score=36.13 Aligned_cols=143 Identities=18% Similarity=0.224 Sum_probs=86.9
Q ss_pred HCCCe-eeEeccCCCChHHHHHHHHhhccCcccc-Ccc--hhHHHHHHHHHHHHHHh---------C----C-CCCCCCC
Q 007939 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFND-DIQ--GTAGVALAGLLGTVRAQ---------G----L-SLTDFAD 323 (584)
Q Consensus 262 ~~P~~-lIqfEDf~~~nAf~lL~ryr~~~~~FND-DiQ--GTaaV~LAgll~Alr~~---------g----~-~l~dl~~ 323 (584)
..|+. .|+.--.+..|- .+ +..+..+++.|- +.. .+|=-+++.+|+..|.. | . +..+|.+
T Consensus 47 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g 124 (303)
T 1qp8_A 47 KMPRLKFIQVVTAGLDHL-PW-ESIPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQG 124 (303)
T ss_dssp HCTTCCCEEBSSSCCTTS-CC-TTSCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTT
T ss_pred hCCCCcEEEECCcCcccc-cH-HHHhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 35665 555443333331 11 112334666653 333 33445788888887642 1 1 2235666
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.++.|+|.|..|..+|+.+... |+ +++.+|+..- +. .. . ...+|.|+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~dr~~~-----~~------~~-~---------~~~~l~el 171 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-----GA-------QVRGFSRTPK-----EG------PW-R---------FTNSLEEA 171 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CS------SS-C---------CBSCSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCcc-----cc------Cc-c---------cCCCHHHH
Confidence 9999999999999999987653 43 5888887532 00 00 0 12468888
Q ss_pred hcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 404 VRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 404 V~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
++. .|+++=.- ...+.++++.++.|. +..++.=.|.
T Consensus 172 l~~--aDvV~l~~P~~~~t~~~i~~~~l~~mk----~gailin~sr 211 (303)
T 1qp8_A 172 LRE--ARAAVCALPLNKHTRGLVKYQHLALMA----EDAVFVNVGR 211 (303)
T ss_dssp HTT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTCEEEECSC
T ss_pred Hhh--CCEEEEeCcCchHHHHHhCHHHHhhCC----CCCEEEECCC
Confidence 887 88877442 234678888888883 4678887776
No 189
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=70.17 E-value=2.5 Score=42.11 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-||+|+|||.||+-.|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 589999999999999887755 465 46777754
No 190
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=69.17 E-value=7.2 Score=39.98 Aligned_cols=145 Identities=16% Similarity=0.128 Sum_probs=87.1
Q ss_pred ccCccccC-c--chhHHHHHHHHHHHHHHh---------CC--------CCCCCCCceEEEeCcchhhHHHHHHHHHHHH
Q 007939 288 RFCMFNDD-I--QGTAGVALAGLLGTVRAQ---------GL--------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 288 ~~~~FNDD-i--QGTaaV~LAgll~Alr~~---------g~--------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (584)
-+.+.|-- . +.+|=-+++-+|+..|.. |. .-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-- 167 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGW-- 167 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTS--
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 35555532 1 334556788888777631 10 01245559999999999999999887543
Q ss_pred HHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007939 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 423 (584)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Ft 423 (584)
|+ +++.+|+... ... .+... + ....+|.|+++. .|+++=.- ...+.++
T Consensus 168 ---G~-------~V~~~d~~~~--------~~~---~~~~~----g-~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 168 ---GA-------TLQYHEAKAL--------DTQ---TEQRL----G-LRQVACSELFAS--SDFILLALPLNADTLHLVN 219 (330)
T ss_dssp ---CC-------EEEEECSSCC--------CHH---HHHHH----T-EEECCHHHHHHH--CSEEEECCCCSTTTTTCBC
T ss_pred ---CC-------EEEEECCCCC--------cHh---HHHhc----C-ceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhC
Confidence 44 5888887521 110 11100 0 012469999987 88887442 1247899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007939 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (584)
Q Consensus 424 eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~A 468 (584)
++.++.|. +..+|.=.|+-..--|---.+|++ +|+.-.|
T Consensus 220 ~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA 258 (330)
T 4e5n_A 220 AELLALVR----PGALLVNPCRGSVVDEAAVLAALE--RGQLGGY 258 (330)
T ss_dssp HHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCccEE
Confidence 99999993 577888888754433333344444 5655433
No 191
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=69.11 E-value=4.4 Score=42.04 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=66.0
Q ss_pred CCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCC
Q 007939 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (584)
+...||.|+|| |..|..+|-.++. .|+. ..+.++|.+-=..++ ..+|.+. .|.. ... ....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i---~~t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNL---TFTS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTT--CCC---EEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCC--Cce---EEcC
Confidence 45589999998 9999888854433 4653 369999973100000 0023222 2311 111 1235
Q ss_pred CHHHHhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007939 399 SLLEVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 461 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~---~g~-----------Fteevv~~M~~~~~erPI-IFaLSNPt~~aE~tpeda~~wT 461 (584)
++.++++. .|++|=+.+. +|- .-+++++.+.+ ++..-+ |+-.|||.. ....-+++.+
T Consensus 69 d~~~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~-~~p~a~~vlvvsNPvd---~~t~i~~k~s 140 (343)
T 3fi9_A 69 DIKEALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKS-YCPDCKHVIIIFNPAD---ITGLVTLIYS 140 (343)
T ss_dssp CHHHHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHH-HCTTCCEEEECSSSHH---HHHHHHHHHH
T ss_pred CHHHHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCchH---HHHHHHHHHc
Confidence 78899988 8988744333 332 12355566643 777775 888999973 3334444443
No 192
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=68.93 E-value=18 Score=37.05 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=74.9
Q ss_pred cCccccCcc---hhHHHHHHHHHHHHHHh---------CC-------CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHH
Q 007939 289 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (584)
Q Consensus 289 ~~~FNDDiQ---GTaaV~LAgll~Alr~~---------g~-------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (584)
+.+.|---- .+|=-+++.+|+..|.. |. .-.+|.+.++.|+|.|..|.-+|+.+...
T Consensus 88 I~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f---- 163 (334)
T 3kb6_A 88 ILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF---- 163 (334)
T ss_dssp CEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc----
Confidence 555554322 34445677777765531 10 11344559999999999999999888765
Q ss_pred cCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEee----cCCCCCCCHH
Q 007939 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEE 425 (584)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~----S~~~g~Ftee 425 (584)
|+ +++.+|+.. + +......+ ...+|.|+++. .|+++=. ....+.|+++
T Consensus 164 -g~-------~v~~~d~~~-----~---~~~~~~~~----------~~~~l~ell~~--sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 164 -GM-------KVLCYDVVK-----R---EDLKEKGC----------VYTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp -TC-------EEEEECSSC-----C---HHHHHTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred -Cc-------eeeecCCcc-----c---hhhhhcCc----------eecCHHHHHhh--CCEEEEcCCCChhhccCcCHH
Confidence 33 577788631 1 11111111 23579999988 8887732 1224899999
Q ss_pred HHHHhhhcCCCCCeEEecCC
Q 007939 426 VLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 426 vv~~M~~~~~erPIIFaLSN 445 (584)
.++.|. +..++.=.|.
T Consensus 216 ~l~~mk----~~a~lIN~aR 231 (334)
T 3kb6_A 216 RISLMK----DGVYLINTAR 231 (334)
T ss_dssp HHHHSC----TTEEEEECSC
T ss_pred HHhhcC----CCeEEEecCc
Confidence 999993 4666665554
No 193
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=68.90 E-value=2.2 Score=41.40 Aligned_cols=34 Identities=26% Similarity=0.553 Sum_probs=27.7
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3689999999999999988754 354 599999864
No 194
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.82 E-value=3 Score=39.58 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 689999999999999988765 353 69999974
No 195
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=68.74 E-value=4.8 Score=41.74 Aligned_cols=121 Identities=19% Similarity=0.182 Sum_probs=65.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||+|+|+|.+|-.+|+.|.+. .++.++|+. .+ .+......+....-+ ..+..+|.++
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~--~a~~la~~~~~~~~d---~~~~~~l~~l 74 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NE--NLEKVKEFATPLKVD---ASNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HH--HHHHHTTTSEEEECC---TTCHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HH--HHHHHHhhCCeEEEe---cCCHHHHHHH
Confidence 7999999999998888877542 258888873 11 111111111100000 0123568888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCcc
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv 476 (584)
+++ +|++|-+. |..+..+++++-.+ ..=.++-+|.-.+.++.--++|.+ .|.. +..|+=|+|-
T Consensus 75 l~~--~DvVIn~~--P~~~~~~v~~a~l~---~G~~~vD~s~~~~~~~~l~~~Ak~--aG~~-~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL--PGFLGFKSIKAAIK---SKVDMVDVSFMPENPLELRDEAEK--AQVT-IVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC--CHHHHHHHHHHHHH---TTCCEEECCCCSSCGGGGHHHHHH--TTCE-EECSCBTTTB
T ss_pred HhC--CCEEEECC--ChhhhHHHHHHHHH---hCCeEEEccCCcHHHHHHHHHHHH--cCCE-EEECCCCcch
Confidence 886 89999763 43456677665433 233456677632322222344433 4433 3455556554
No 196
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=68.24 E-value=5.1 Score=40.45 Aligned_cols=127 Identities=20% Similarity=0.317 Sum_probs=70.9
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec--Cc-ccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs--~G-Li~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
||+|.|| |..|..++..|+. .|+- ..++|+|. +- .+.....+|.+.. ++......+. ....++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~--~~~d~l 68 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFM-----KDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIY--VESDEN 68 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTC-----CEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEE--EEETTC
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCC-----CEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEE--eCCcch
Confidence 8999999 9999888777653 3432 46999996 21 0000000122211 2221100000 001136
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCc
Q 007939 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~---g~-----------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT--~Gr 464 (584)
.++++. .|++|=+.+.+ |- .+++++++|.+ ++ +.+|+-.|||.. ...+-+++.+ +-+
T Consensus 69 ~~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~-~~~vlv~SNPv~---~~t~~~~k~~~~p~~ 141 (313)
T 1hye_A 69 LRIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-IC-DTKIFVITNPVD---VMTYKALVDSKFERN 141 (313)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HC-CCEEEECSSSHH---HHHHHHHHHHCCCTT
T ss_pred HHHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEecCcHH---HHHHHHHHhhCcChh
Confidence 788887 88888665544 32 35678888854 77 889999999985 3344444532 112
Q ss_pred EEEEeCC
Q 007939 465 IVFASGS 471 (584)
Q Consensus 465 ai~AsGS 471 (584)
-+|++|+
T Consensus 142 rviG~gt 148 (313)
T 1hye_A 142 QVFGLGT 148 (313)
T ss_dssp SEEECTT
T ss_pred cEEEeCc
Confidence 3556654
No 197
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=68.10 E-value=11 Score=37.13 Aligned_cols=104 Identities=16% Similarity=0.230 Sum_probs=58.2
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCCh----hhhccccccCCcCCcccCC
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP----AAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~----~k~~fA~~~~~~~~~~~~~ 398 (584)
.||+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+.. ....+..- + ..+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~--D---l~d~~ 88 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKG--E---IQNGE 88 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEEC--C---TTCHH
T ss_pred CeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEc--C---CCCHH
Confidence 79999998 77777777776653 421 25777777531110 011111 01111111 0 12335
Q ss_pred CHHHHhcccCCcEEEeecCCCCCC----------------CHHHHHHhhhcCCCCCeEEecC
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGGVF----------------NEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g~F----------------teevv~~M~~~~~erPIIFaLS 444 (584)
++.++++..++|++|=+.+....- |..+++++.+ ..-+-+||.=|
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS 149 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCc
Confidence 688899888999999777643221 3567888754 43345787543
No 198
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=67.64 E-value=2.5 Score=47.64 Aligned_cols=33 Identities=39% Similarity=0.571 Sum_probs=29.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 18 s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 8999999999999999999876 44 689999987
No 199
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=67.49 E-value=6.8 Score=39.56 Aligned_cols=58 Identities=24% Similarity=0.322 Sum_probs=35.6
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 294 DDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++.++.....++..+.+++..+.+.. ++|+|+|||..|...+++.. ..|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRLG----DPVLICGAGPIGLITMLCAK-----AAGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCTT----CCEEEECCSHHHHHHHHHHH-----HTTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 33344444455566677777666554 49999999876655443332 2454 46888876
No 200
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=67.05 E-value=5.7 Score=40.27 Aligned_cols=115 Identities=15% Similarity=0.229 Sum_probs=66.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|..+|-.|+. .|+- ..++|+|.+-=..++. .+|.+. .+|....... ..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v-----~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRV-----KAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEE-----EECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEE-----EeCCHH
Confidence 699999999999998877653 2442 4799999751000000 122222 2333111000 113466
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
+++. .|++|=+.+.+.. .=+++++.|.+ ++..-+|+-.|||.. ...+-+++.
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~t~~~~k~ 136 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA-SKFDGIFLVATNPVD---ILAYATWKF 136 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 7777 8988755444422 11356666644 788999999999985 344445453
No 201
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.71 E-value=3.5 Score=39.52 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 689999999999999888765 353 59999997
No 202
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=66.60 E-value=17 Score=37.63 Aligned_cols=197 Identities=15% Similarity=0.105 Sum_probs=111.2
Q ss_pred ccCcccc-C-cchhHHHHHHHHHHHHHHh---------C---C-------------CCCCCCCceEEEeCcchhhHHHHH
Q 007939 288 RFCMFND-D-IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVLK 340 (584)
Q Consensus 288 ~~~~FND-D-iQGTaaV~LAgll~Alr~~---------g---~-------------~l~dl~~~riv~~GAGsAg~GiA~ 340 (584)
-+++.|. + -..+|=-+++-+|+..|.. | . .-.+|.+.+|.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 3555552 1 2345556778888777641 1 0 123455599999999999999999
Q ss_pred HHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----
Q 007939 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---- 416 (584)
Q Consensus 341 li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S---- 416 (584)
.+... |+ +++.+|+.. . . ..+... +.....+|.|+++. .|+++=.-
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~--~-------~---~~~~~~----g~~~~~~l~ell~~--aDiV~l~~Plt~ 227 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN--S-------K---ERARAD----GFAVAESKDALFEQ--SDVLSVHLRLND 227 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH--H-------H---HHHHHT----TCEECSSHHHHHHH--CSEEEECCCCST
T ss_pred HHHhC-----CC-------EEEEECCCC--C-------H---HHHHhc----CceEeCCHHHHHhh--CCEEEEeccCcH
Confidence 88654 43 688888742 0 0 111110 00112479999988 89887432
Q ss_pred CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccccCCCeeeeccCccccccch
Q 007939 417 GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFP 496 (584)
Q Consensus 417 ~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFP 496 (584)
...+.|+++.++.|. +..|+.=.|+-..--|---.+|++ +|+.-.|.=-=|++-..+ ....-=+..|+.+-|
T Consensus 228 ~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~--~~~pL~~~~nvilTP 299 (352)
T 3gg9_A 228 ETRSIITVADLTRMK----PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL--QGHTLLRMENCICTP 299 (352)
T ss_dssp TTTTCBCHHHHTTSC----TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC--SCCGGGGCTTEEECC
T ss_pred HHHHhhCHHHHhhCC----CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC--CCChhhcCCCEEECC
Confidence 234789999999994 577888888755444555556655 444321110011111010 000112345888888
Q ss_pred hhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007939 497 GIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (584)
Q Consensus 497 GiglG~~~~~a~~Itd~m~~aAA~alA~~v~ 527 (584)
=+|- ....--+.|...+++-|.....
T Consensus 300 Hia~-----~t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 300 HIGY-----VERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp SCTT-----CBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHc
Confidence 7742 1111224566666777766653
No 203
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=66.36 E-value=10 Score=38.63 Aligned_cols=108 Identities=19% Similarity=0.307 Sum_probs=58.6
Q ss_pred CcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC
Q 007939 295 DIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER 374 (584)
Q Consensus 295 DiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r 374 (584)
+.++.....++..+.+++..+.+.. ++++|+|||..|.-.+.+.. ..|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIKAG----STVAILGGGVIGLLTVQLAR-----LAGA------TTVILSTRQ------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC-------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC-------
Confidence 3445444456666777777776554 49999999866654443332 2454 368877752
Q ss_pred CCCChhhhccccccC-C-cCCcccCCCHHHHhcc---c---CCcEEEeecCCCCCCCHHHHHHh
Q 007939 375 KNLDPAAAPFAKDPG-D-FMGLREGASLLEVVRK---V---KPHVLLGLSGVGGVFNEEVLKAM 430 (584)
Q Consensus 375 ~~l~~~k~~fA~~~~-~-~~~~~~~~~L~evV~~---v---kptvLIG~S~~~g~Fteevv~~M 430 (584)
+.+..+++... + .- .....++.+.++. . +.|++|=+++. +..-++.++.+
T Consensus 217 ----~~~~~~a~~lGa~~vi-~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~-~~~~~~~~~~l 274 (370)
T 4ej6_A 217 ----ATKRRLAEEVGATATV-DPSAGDVVEAIAGPVGLVPGGVDVVIECAGV-AETVKQSTRLA 274 (370)
T ss_dssp ----HHHHHHHHHHTCSEEE-CTTSSCHHHHHHSTTSSSTTCEEEEEECSCC-HHHHHHHHHHE
T ss_pred ----HHHHHHHHHcCCCEEE-CCCCcCHHHHHHhhhhccCCCCCEEEECCCC-HHHHHHHHHHh
Confidence 33444444210 0 00 0112456666654 1 57888877653 22234555555
No 204
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=66.23 E-value=9.9 Score=37.86 Aligned_cols=49 Identities=24% Similarity=0.297 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.....+.+++..+.+..| +++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 148 ~~~ta~~~l~~~~~~~g~----~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 148 AGVTTYKAIKVSGVKPGD----WQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHHTCCTTC----EEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred ceeeEEeeecccCCCCCC----EEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 334456778887776555 999999998885444333322 23 47888886
No 205
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=66.03 E-value=13 Score=38.03 Aligned_cols=218 Identities=13% Similarity=0.087 Sum_probs=122.8
Q ss_pred CCe-eeEeccCCCChHHHHHHH----HhhccCcccc--C--cchhHHHHHHHHHHHHHHh---------C----CCCCCC
Q 007939 264 PKA-IVQFEDFQMKWAFETLER----YRKRFCMFND--D--IQGTAGVALAGLLGTVRAQ---------G----LSLTDF 321 (584)
Q Consensus 264 P~~-lIqfEDf~~~nAf~lL~r----yr~~~~~FND--D--iQGTaaV~LAgll~Alr~~---------g----~~l~dl 321 (584)
|+. .|+.-=.+..|-..-++. .+..+++.|- - -+..|=-+++.+|+..|.. | .+..+|
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l 137 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTR 137 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCS
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCc
Confidence 766 676666665553231221 2234555542 2 1456667788888888741 1 122344
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
.+.++.|+|.|..|..+|+.+... |+ +++.+|+..- .... +.... ...+|.
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~~----~~~~~-------~~~~l~ 188 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRCWSRSRK------SWPG----VESYV-------GREELR 188 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESSCC------CCTT----CEEEE-------SHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEcCCch------hhhh----hhhhc-------ccCCHH
Confidence 559999999999999999988654 44 5888887421 1110 10000 114688
Q ss_pred HHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEeCCCCCccc
Q 007939 402 EVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 477 (584)
Q Consensus 402 evV~~vkptvLIG~S----~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT~Grai~AsGSPf~pv~ 477 (584)
|+++. .|+++=.- ...+.|+++.+..|. +..|+.=.|+-..--|---.+|++ +|+.-.|.=-=|++-.
T Consensus 189 ell~~--aDiV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP 260 (315)
T 3pp8_A 189 AFLNQ--TRVLINLLPNTAQTVGIINSELLDQLP----DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEP 260 (315)
T ss_dssp HHHHT--CSEEEECCCCCGGGTTCBSHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSS
T ss_pred HHHhh--CCEEEEecCCchhhhhhccHHHHhhCC----CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCC
Confidence 99987 89887331 124789999999983 567888777755433333344544 5665433211221111
Q ss_pred cCCCeeeeccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007939 478 LGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (584)
Q Consensus 478 ~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~alA~~v~ 527 (584)
.+... .-=+..|+.+-|=++- .+. .+.|...+++-|.....
T Consensus 261 l~~~~--pL~~~~nvilTPHia~------~t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 261 LPQES--PLWRHPRVAMTPHIAA------VTR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp CCTTC--GGGGCTTEEECSSCSS------CCC-HHHHHHHHHHHHHHHHH
T ss_pred CCCCC--hhhcCCCEEECCCCCc------ccH-HHHHHHHHHHHHHHHHc
Confidence 11011 1124468888887652 222 25677777777766653
No 206
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=65.99 E-value=3.6 Score=43.04 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=27.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..|... ..| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 6999999999999999988664 113 36889988754
No 207
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=65.57 E-value=8.3 Score=38.92 Aligned_cols=49 Identities=29% Similarity=0.434 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.+++..+.+.. ++|+|+|+|+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTLG----HKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44455666766665544 599999998766555443332 353 46888876
No 208
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=65.53 E-value=5.4 Score=40.80 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=29.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 689999999999999988755 3543 379999987533
No 209
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=65.47 E-value=2 Score=43.97 Aligned_cols=115 Identities=19% Similarity=0.278 Sum_probs=66.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc--ccccCC-CCCChhhhccccccCCcCCcccCCCH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G--Li~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .+|.+. .++......+. ...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~---~t~d- 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANII---GTSD- 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEE---EESC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEE---EcCC-
Confidence 799999999999999988765 344 2699999861 111110 122221 13322111110 1122
Q ss_pred HHHhcccCCcEEEeecCC---CCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 401 LEVVRKVKPHVLLGLSGV---GGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~---~g~-----F------teevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
.++++. .|++|=+.+. +|- | -+++++.+.+ +++.-+|+-.|||.. ....-+++.
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vlvvsNPvd---~~t~~~~k~ 140 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK-HSPNAIIVVLTNPVD---AMTYSVFKE 140 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHH
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEECCChHH---HHHHHHHHh
Confidence 456766 8887644433 332 2 2466677754 788889999999974 344445543
No 210
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.44 E-value=3.7 Score=40.01 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.. .|+ ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999887754 353 699999864
No 211
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=65.41 E-value=3.2 Score=35.23 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=25.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|..|..+++.+.. .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999999999888877754 342 57888874
No 212
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.28 E-value=3.7 Score=39.63 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|||+|||.||+..|..+.. .|. ++.++|+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 589999999999999887754 353 68999986
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.12 E-value=4 Score=42.40 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||||+|+|.||+..|..|... +-. -+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~~-----~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MPD-----LKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CTT-----CEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----CcC-----CeEEEEcCC
Confidence 5899999999999999988653 211 368888875
No 214
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=65.09 E-value=5.2 Score=39.91 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|.|..|.++|..|... |. +++++|+.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 7999999999999999988663 43 57778864
No 215
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.84 E-value=4.6 Score=36.56 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=26.5
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+.+|+|+|+|..|..+|+.|... .|. +++++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~----~g~-------~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR----YGK-------ISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH----HCS-------CEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc----cCC-------eEEEEECC
Confidence 37999999999999999887552 142 58888874
No 216
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=64.69 E-value=4.2 Score=41.50 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|.... ..| .++.++|+.-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCC
Confidence 47999999999999999887621 123 3688888765
No 217
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=64.65 E-value=5 Score=35.12 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|..|..+|+.|... |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 3899999999999999888653 43 69999984
No 218
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=64.61 E-value=6.3 Score=39.68 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999888764 41 268888875
No 219
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=64.39 E-value=2.1 Score=43.91 Aligned_cols=117 Identities=19% Similarity=0.265 Sum_probs=65.2
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHH
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
..||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++- .+|.+.. ++......+ ....+ .
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v---~~t~d-~ 68 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKV---RGTND-Y 68 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCE---EEESC-G
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEE---EEcCC-H
Confidence 3799999999999998877665 3541 599999852110000 0121111 111111111 01122 4
Q ss_pred HHhcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007939 402 EVVRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 461 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~---g~-----F--t----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT 461 (584)
++++. .|++|=+.+.+ |- | + +++++.+.+ +++.-+|+-.|||.. ...+-+++.+
T Consensus 69 ~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd---~~t~~~~k~s 136 (321)
T 3p7m_A 69 KDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKH-NCPNAFVICITNPLD---IMVNMLQKFS 136 (321)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHH
T ss_pred HHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHhc
Confidence 67777 88877444333 32 1 2 456666654 778889999999974 3344455543
No 220
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=64.33 E-value=5.8 Score=40.41 Aligned_cols=87 Identities=16% Similarity=0.214 Sum_probs=51.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.+|.|+|+|..|..+|..+.. .|. +++++|+.. ... ...++.. +... .++.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~---------~~~-~~~a~~~----G~~~-~~~~e~ 69 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSG---------SAT-VAKAEAH----GLKV-ADVKTA 69 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTT---------CHH-HHHHHHT----TCEE-ECHHHH
T ss_pred CEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECCh---------HHH-HHHHHHC----CCEE-ccHHHH
Confidence 799999999999999988765 343 477777642 110 1122211 0011 268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH-HhhhcCCCCCeEE
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLK-AMRESDSVKPAIF 441 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~-~M~~~~~erPIIF 441 (584)
++. +|++| ++..+.. .+++++ .+.....+..+|.
T Consensus 70 ~~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 70 VAA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred Hhc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 876 88877 5543333 378887 6643233344444
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.12 E-value=4.7 Score=35.61 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.6
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+.+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 47899999999999998888652 4 368899884
No 222
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=64.00 E-value=4.2 Score=35.12 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=25.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999998887653 43 58889874
No 223
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=63.92 E-value=21 Score=36.72 Aligned_cols=72 Identities=25% Similarity=0.455 Sum_probs=38.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccC-C-cCCcccCCCHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-D-FMGLREGASLL 401 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~-~-~~~~~~~~~L~ 401 (584)
++|+|+|||..|...+.+.. ..|. ++++.+|+. +.+..+++... + .- .....++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~-----------~~~~~~~~~lGa~~vi-~~~~~~~~ 271 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS-----------EVRRNLAKELGADHVI-DPTKENFV 271 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC-----------HHHHHHHHHHTCSEEE-CTTTSCHH
T ss_pred CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC-----------HHHHHHHHHcCCCEEE-cCCCCCHH
Confidence 69999999866654443332 2454 468877752 33444444210 0 00 00113455
Q ss_pred HHhcc----cCCcEEEeecCC
Q 007939 402 EVVRK----VKPHVLLGLSGV 418 (584)
Q Consensus 402 evV~~----vkptvLIG~S~~ 418 (584)
+.|+. -+.|+.|-+++.
T Consensus 272 ~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 272 EAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HHHHHHTTTCCCSEEEECSSC
T ss_pred HHHHHHhCCCCCCEEEECCCC
Confidence 55443 368888877753
No 224
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=63.91 E-value=3.1 Score=40.23 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..|... |+ ++.++|+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6899999999999999887653 54 58889984
No 225
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=63.89 E-value=9.1 Score=37.20 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.8
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 689999999999999887653 43 58888874
No 226
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.01 E-value=4.1 Score=33.35 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=49.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccc-cCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~-~~~~~~~~~~~~L~e 402 (584)
.+|+|+|+|..|..+++.+.. .|. .+++++|++.- .+...+..-.+. .-+ ..+..++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~~------~~~~~~~~~~~~~~~d---~~~~~~~~~ 65 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDLA------ALAVLNRMGVATKQVD---AKDEAGLAK 65 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCHH------HHHHHHTTTCEEEECC---TTCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCHH------HHHHHHhCCCcEEEec---CCCHHHHHH
Confidence 799999999999888887755 341 36888887410 111111000000 000 012245777
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~ 432 (584)
+++. +|++|=+. |..++..+++.+.+
T Consensus 66 ~~~~--~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 66 ALGG--FDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp HTTT--CSEEEECS--CGGGHHHHHHHHHH
T ss_pred HHcC--CCEEEECC--CchhhHHHHHHHHH
Confidence 7764 89988655 45567888887754
No 227
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=62.47 E-value=2.6 Score=43.64 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=67.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|.++|..++.. |+- ..+.++|..-=..++. .+|.+. .+|..... . ....++.+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~-i---~~t~d~~~ 86 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTAK-I---VSGKDYSV 86 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCSE-E---EEESSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCCe-E---EEcCCHHH
Confidence 6999999999999999887763 442 3799999731000000 022221 13322110 0 11234443
Q ss_pred HhcccCCcEEE---eecCCCCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007939 403 VVRKVKPHVLL---GLSGVGGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 461 (584)
Q Consensus 403 vV~~vkptvLI---G~S~~~g~-----F------teevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~wT 461 (584)
+++ .|++| |....+|- | -+++++.+.+ +++.-+|+-.|||.. ....-+++.+
T Consensus 87 -~~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k-~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 87 -SAG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVK-HSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp -CSS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred -hCC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hCCCceEEeCCCccH---HHHHHHHHHh
Confidence 666 89887 33333331 1 2456667754 789999999999974 4455565654
No 228
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=62.47 E-value=6.9 Score=40.11 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=28.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 689999999999999998865 3543 36999998643
No 229
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=62.44 E-value=5 Score=35.81 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 4799999999999998877653 4 368899876
No 230
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=62.09 E-value=3.6 Score=41.42 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=62.2
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc---cccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL---i~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
.||+|.|| |..|.-++..|+. .|.-...-...++++|...- ......++.+...+|..+- ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999888877654 34310000126999997420 0000001111001222111 12356
Q ss_pred HHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCC-CCCeEEecCCCC
Q 007939 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDS-VKPAIFAMSNPT 447 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~~g~--------------Fteevv~~M~~~~~-erPIIFaLSNPt 447 (584)
+.++++. +|++|=+.+.+.. .|.++++++.+ ++ ...+++-.|||.
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~-~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE-VAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEeCCch
Confidence 8889986 8999866665432 34567788754 54 455788899996
No 231
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=61.92 E-value=4.2 Score=39.96 Aligned_cols=31 Identities=29% Similarity=0.551 Sum_probs=24.2
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-|+|+|||.||+-.|..|.. .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999998887755 465 47788864
No 232
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.63 E-value=4.9 Score=39.21 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 689999999999999887754 353 69999987
No 233
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=61.53 E-value=6.9 Score=40.24 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..|||+|||.+|+.+|-.|.+..- .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~-----------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG-----------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-----------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----------CcEEEEcc
Confidence 789999999999999988876420 26999998
No 234
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=61.51 E-value=3.8 Score=40.81 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
-.|+|+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 679999999999999987765 354 5888888753
No 235
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=61.16 E-value=3.9 Score=41.81 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=64.4
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||..|.++|..|+.. |+- ..+.++|..-=..++. .+|.+.. .+....... ...+..++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v----~~~~~~~a 66 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DVA-----KEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRV----TGTNDYGP 66 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCS-----SEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEE----EEESSSGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCchHHHHHHHHHHhccc-cccCCCcEE----EECCCHHH
Confidence 799999999999999887763 441 4799999852111100 0122111 111110000 00134567
Q ss_pred hcccCCcEEEeecCC---CCC-------CC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 404 VRKVKPHVLLGLSGV---GGV-------FN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-------Ft----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
++. .|++|=+.+. +|- .| +++++.+. ++++..+|+-.|||.. ....-+++.
T Consensus 67 ~~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~~~p~a~vivvtNPvd---~~t~~~~k~ 131 (314)
T 3nep_X 67 TED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFV-EGSPDSTIIVVANPLD---VMTYVAYEA 131 (314)
T ss_dssp GTT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHH-TTCTTCEEEECCSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHH-HhCCCcEEEecCCchh---HHHHHHHHh
Confidence 777 8887633333 332 12 45666665 4899999999999984 333445543
No 236
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=61.12 E-value=7.9 Score=39.83 Aligned_cols=37 Identities=14% Similarity=0.373 Sum_probs=29.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999988765 3543 469999986543
No 237
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.07 E-value=14 Score=33.59 Aligned_cols=50 Identities=14% Similarity=0.282 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.++..+.+++....--.. +++++.|| |..|..+++++.. .|. +++.+|+.
T Consensus 22 ~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKM-----IGA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHH-----cCC-------EEEEEeCC
Confidence 445555566433332234 79999994 7667666665543 342 58888763
No 238
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=60.93 E-value=5.9 Score=33.44 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 589999999999998887754 24 368889874
No 239
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=60.87 E-value=6.2 Score=42.59 Aligned_cols=191 Identities=12% Similarity=0.152 Sum_probs=96.8
Q ss_pred ccccccCChhhHHHHHhcCCCCCceEE-EEecCceeeccCCCCCCcccccch-hhhhhhh-----hcCCCCCCceeEEee
Q 007939 149 GMYFSAKDKGEMMSMIYNWPAQQVDMI-VLTDGSRILGLGDLGVQGIGIPIG-KLDVYVA-----AAGINPQRILPVMLD 221 (584)
Q Consensus 149 Glyis~~D~g~i~~~l~nwp~~~v~vi-VVTDG~rILGLGDlG~~Gm~I~iG-Kl~LY~a-----~gGI~P~~~LPV~LD 221 (584)
|-|-...|-..+..+|+.. +++++ +++-|+++=-|-++|-.-.-|.++ ....|++ --|+. .+...
T Consensus 210 G~~~~~gd~~eik~lL~~~---Gi~v~~~~~gg~~~~el~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP---~i~~~-- 281 (483)
T 3pdi_A 210 GEYNIAGEFWHVLPLLDEL---GLRVLCTLAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTP---WFEGS-- 281 (483)
T ss_dssp SCCCBTTGGGGTHHHHHHH---TEEEEEEETSSBCHHHHTTGGGCSEEEEESCCTTHHHHHHHHHHHCCC---EEEEC--
T ss_pred cCCCChhHHHHHHHHHHHC---CCcEEEECCCcCCHHHHHhhhcCCEEEEEchhhHHHHHHHHHHHhCCC---EeecC--
Confidence 3343445666788888764 56765 444455555555555544444332 2222222 12454 22211
Q ss_pred ccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCChHHHHHHHHhhccCccccCcchhHH
Q 007939 222 VGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAG 301 (584)
Q Consensus 222 vGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaa 301 (584)
++|+ +-.++|+..+.+.+-.--| ..++-..+++.|.++
T Consensus 282 -------------p~Gi-----------~~T~~~L~~ia~~~g~~~i------~~~~e~~i~~er~~~------------ 319 (483)
T 3pdi_A 282 -------------FYGI-----------TDTSQALRDFARLLDDPDL------TARTEALIAREEAKV------------ 319 (483)
T ss_dssp -------------SSSH-----------HHHHHHHHHHHHHTTCHHH------HHHHHHHHHHHHHHH------------
T ss_pred -------------CCCH-----------HHHHHHHHHHHHHhCCcch------hhhHHHHHHHHHHHH------------
Confidence 1232 2368888888887731100 022335566665553
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCC--CCCh
Q 007939 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK--NLDP 379 (584)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~--~l~~ 379 (584)
..++.-....|.. .|++|+|.+.-..++++.+.+ .|+. +..+- +.... +...
T Consensus 320 ------~~al~~~~~~l~G---Krv~i~~~~~~~~~l~~~L~E-----lGme-------vv~~g-----t~~~~~~d~~~ 373 (483)
T 3pdi_A 320 ------RAALEPWRARLEG---KRVLLYTGGVKSWSVVSALQD-----LGMK-------VVATG-----TKKSTEEDKAR 373 (483)
T ss_dssp ------HHHHHHHHHHHTT---CEEEEECSSSCHHHHHHHHHH-----HTCE-------EEEEC-----BSSSCHHHHHH
T ss_pred ------HHHHHHHHHHhcC---CEEEEECCCchHHHHHHHHHH-----CCCE-------EEEEe-----cCCCCHHHHHH
Confidence 3333333344555 899999999888899987754 4662 33221 21110 0000
Q ss_pred hhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec
Q 007939 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 416 (584)
Q Consensus 380 ~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S 416 (584)
.+..+ .+...+-...+...|++.++..+||.+||-|
T Consensus 374 ~~~~l-~~~~~i~~d~d~~el~~~i~~~~pDL~ig~~ 409 (483)
T 3pdi_A 374 IRELM-GDDVKMLDEGNARVLLKTVDEYQADILIAGG 409 (483)
T ss_dssp HHHHS-CSSCCBCCSCSHHHHHHHHHHTTCSEEECCG
T ss_pred HHHhc-CCCCEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 11111 1111110001234577888889999999965
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=60.73 E-value=6.1 Score=41.06 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=27.6
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..+|||+|||.||+..|..|.... .| .++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCC
Confidence 479999999999999998886641 12 3688888764
No 241
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=60.67 E-value=4.8 Score=40.91 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 799999999999999887754 354 688898864
No 242
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=60.65 E-value=10 Score=40.63 Aligned_cols=54 Identities=24% Similarity=0.260 Sum_probs=35.1
Q ss_pred HHHHhcc----cC-CcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCH
Q 007939 400 LLEVVRK----VK-PHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTA 454 (584)
Q Consensus 400 L~evV~~----vk-ptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~tp 454 (584)
+.++++. .+ .+++|-.||.+-..|+++.+.+.+...... ++-+|||....|-++
T Consensus 108 v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d-~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 108 VFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSG-AKVVSNPEFLREGAA 166 (446)
T ss_dssp HHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSC-CEEEECCCCCCTTSH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCC-ceEEeCcccccccch
Confidence 5555443 33 467888898877778888777654322222 466889988777775
No 243
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=60.55 E-value=58 Score=32.99 Aligned_cols=103 Identities=10% Similarity=0.079 Sum_probs=63.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccc-cCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~-~~~~~~~~~~~~L~e 402 (584)
.++.|+|+|..|-.+++.+... .+. ++|+++|+. . .......|.+. .-+. ... ++.|
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~-----~---a~~la~~l~~~~g~~~---~~~-~~~e 179 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY-----A---SPEILERIGRRCGVPA---RMA-APAD 179 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT-----C---CHHHHHHHHHHHTSCE---EEC-CHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc-----H---HHHHHHHHHHhcCCeE---EEe-CHHH
Confidence 7999999999988877766542 233 689999986 1 12222222211 1000 123 8999
Q ss_pred HhcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHHHh
Q 007939 403 VVRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADAF 458 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~-g~Fteevv~~M~~~~~erPIIFaLSN--Pt~~aE~tpeda~ 458 (584)
+++. .|++|-+.... -.|..++ ..+..+|..++. |. +.|+.++-.-
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~-------l~~G~~V~~vGs~~p~-~~El~~~~~~ 228 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQA-------LRAGAFVGAIGSSLPH-TRELDDEALR 228 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGG-------CCTTCEEEECCCSSTT-CCCCCHHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHH-------cCCCcEEEECCCCCCc-hhhcCHHHHh
Confidence 9988 99999665432 2344332 345778888876 44 5799987643
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=60.48 E-value=4.8 Score=38.49 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEE-EecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~l-vDs~ 367 (584)
.+|+|+|||.||+..|..+... |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 6899999999999999887663 43 4666 8873
No 245
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=60.32 E-value=5.2 Score=40.28 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=27.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 789999999999999887755 354 5888887543
No 246
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=60.08 E-value=5 Score=39.90 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+..+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 689999999999999988865 354 5999998643
No 247
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=60.04 E-value=5.6 Score=42.20 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=27.4
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 37899999999999999988663 43 58999885
No 248
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=59.75 E-value=6.4 Score=40.56 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|||+|||.||+..|..+... |.+ .++.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6899999999999999988663 432 369999987543
No 249
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=59.74 E-value=5.5 Score=40.38 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.1
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.-+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 3789999999999999888765 354 588888764
No 250
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=59.74 E-value=6.3 Score=40.73 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=29.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..+..... ..+ . -++.++|+..-
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~~ 69 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQGD 69 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCCC
Confidence 479999999999999999887642 100 0 36899998753
No 251
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=59.58 E-value=5.7 Score=38.79 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999988765 354 68999987
No 252
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=59.54 E-value=5.6 Score=38.66 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|.||+..|..+.. .|+ ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 689999999999999887755 353 58999985
No 253
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=59.41 E-value=5.7 Score=39.41 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=26.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999887654 353 689999863
No 254
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=59.36 E-value=5.2 Score=41.12 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=26.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 6899999999999999887764 55 5888885
No 255
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=59.33 E-value=5.4 Score=39.25 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988764 53 68888874
No 256
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=59.07 E-value=5.3 Score=38.86 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 354 588888763
No 257
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=59.06 E-value=3.6 Score=46.71 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=30.0
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 348999999999999999988775 54 689999987
No 258
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=59.03 E-value=17 Score=36.12 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=31.6
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 297 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 297 QGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++...-.++..+.+.+..+.+.. +++++.|||..|...+.++ . ..|. +.++.+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~~~g----~~VlV~GaG~vG~~aiq~a-k----~~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQGCEN----KNVIIIGAGTIGLLAIQCA-V----ALGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTCCTT----SEEEEECCSHHHHHHHHHH-H----HTTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhccCCC----CEEEEECCCCcchHHHHHH-H----HcCC------cEEEEEec
Confidence 33333334444555666655543 5999999998775444333 2 2354 46777776
No 259
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=58.50 E-value=6.2 Score=40.53 Aligned_cols=153 Identities=15% Similarity=0.202 Sum_probs=79.5
Q ss_pred CCccccccCChhhHHHHHhcCCCCCceEEEEecCceeeccCCCCCCcccccchhhhhhhhhcCCCCCCceeEEeeccCCc
Q 007939 147 PRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNN 226 (584)
Q Consensus 147 prGlyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN 226 (584)
|||-.++--|-++ |.-+...++.+|||.+.=| |.-- ..--||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e~----~~~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKEM----REQHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHH----HHHHTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHHH----HHhCCeE---EEeEEEEEC--C
Confidence 5666555544443 2222335799999998644 1111 1122576 888888874 3
Q ss_pred cccccCcccccccccCCChhhhhHhHHHHHHHHHH--HCCCe-eeEeccCCCChHHHHHHHHhhc---c--CccccCcch
Q 007939 227 QKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA--RWPKA-IVQFEDFQMKWAFETLERYRKR---F--CMFNDDIQG 298 (584)
Q Consensus 227 ~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~--~~P~~-lIqfEDf~~~nAf~lL~ryr~~---~--~~FNDDiQG 298 (584)
+..+++- +--.+||.+.+++ ..|++ ....+|| .++| ++|.++ + .++..-
T Consensus 69 ~~Y~D~~---------------di~~~efy~~m~~~~~~p~TSqPs~~~~--~~~f---e~l~~~~~~Ii~I~iSS~--- 125 (315)
T 3fys_A 69 ETYREEI---------------ELDWKSFYEEVKKHNELPTTSQPPIGEL--VALY---EELGKSYDAVISIHLSSG--- 125 (315)
T ss_dssp CEEEBTT---------------TBCHHHHHHHHHTTTCCCEEECCCHHHH--HHHH---HHHTTTCSEEEEEESCTT---
T ss_pred EEEECCC---------------CCCHHHHHHHHHhCCCCcccCCCCHHHH--HHHH---HHHHhcCCcEEEEeCCCc---
Confidence 4444331 1125788888875 35764 4444444 2222 333222 1 233343
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHH--HHHHcCC-Chhhhc
Q 007939 299 TAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQA--AARMAGN-NDAFAR 358 (584)
Q Consensus 299 TaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~--~~~~~Gl-s~eeA~ 358 (584)
|.|-+++.+.....+.+ .+|-++-..+++.|..-++..+ |. ++|. |.||..
T Consensus 126 -----LSGTy~sA~~Aa~~~~~---~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI~ 179 (315)
T 3fys_A 126 -----ISGTFSSAAAADSMVDN---IDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDII 179 (315)
T ss_dssp -----TCSHHHHHHHGGGGCSS---CEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred -----HhHHHHHHHHHHHhCCC---CCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHHH
Confidence 34445555555555666 7999999988888887777664 44 6899 888653
No 260
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=58.35 E-value=5.4 Score=39.76 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 679999999999999988865 354 599999874
No 261
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=58.31 E-value=6.1 Score=40.30 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=26.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..|.. .|++ ++.++|+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCC
Confidence 689999999999999888765 3542 277888754
No 262
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=57.93 E-value=6.4 Score=39.95 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 789999999999999888765 354 577887753
No 263
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=57.76 E-value=6.1 Score=39.30 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
..|+|+|||.+|+.+|-.|.. .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988865 353 59999987543
No 264
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=57.64 E-value=5.6 Score=40.88 Aligned_cols=115 Identities=16% Similarity=0.249 Sum_probs=66.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++ .-+|.+. .+|....-. -..+..+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~-----i~~~~~~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVK-----TSYGTYE 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCE-----EEEECGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeE-----EEeCcHH
Confidence 6999999999999999887653 442 479999973100000 0013322 233311000 0111235
Q ss_pred HhcccCCcEEEeecC---CCCC-------CC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 403 VVRKVKPHVLLGLSG---VGGV-------FN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 403 vV~~vkptvLIG~S~---~~g~-------Ft----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
+++. .|++|=+.+ .+|- .+ +++++.+.+ ++..-+|+-.|||.. +..+-+++.
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvtNPvd---~~t~~~~k~ 135 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVATNPVD---ILTYATWKF 135 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcCChHH---HHHHHHHHh
Confidence 6766 888763333 3332 12 566677754 888999999999985 445555554
No 265
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=57.55 E-value=5.3 Score=41.60 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.||+..|..|.+ .|. ++.++++..-
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~-----~g~-------~v~v~E~~~~ 45 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQK-----AGY-------KVTVLEARTR 45 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeccCC
Confidence 799999999999999888765 343 5788877643
No 266
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=57.48 E-value=6.5 Score=41.59 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=28.4
Q ss_pred CceEEEeCcchhhHHHHHHHHH-HHHH-HcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~-~~~~-~~Gls~eeA~~~i~lvDs~ 367 (584)
..+|+|+|||.||+..|..+.. .... ..| .++.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4799999999999999999877 4210 003 369999986
No 267
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=57.12 E-value=7.2 Score=42.10 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=29.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|||+|||.||+..|..|... ..| .+|.++|+..-+
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEYI 73 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCS
T ss_pred CCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCCc
Confidence 7999999999999999888764 113 369999987543
No 268
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=57.12 E-value=9.1 Score=39.97 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
||||+|+|.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999877543 432 3699998754
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=57.07 E-value=3.6 Score=44.15 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=24.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||||+|+|.||+-.|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999988766532 12 369999985
No 270
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=56.69 E-value=3.7 Score=45.08 Aligned_cols=37 Identities=24% Similarity=0.463 Sum_probs=31.0
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|+. .||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 29 ~L~~---~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 29 ALES---AHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHH---CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHhc---CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 3455 8999999999999999988876 44 689999986
No 271
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=56.67 E-value=6.7 Score=39.22 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999888761 241 2699999875
No 272
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=56.50 E-value=6.2 Score=39.80 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999888765 354 588888753
No 273
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=56.47 E-value=7.2 Score=41.21 Aligned_cols=26 Identities=19% Similarity=0.497 Sum_probs=21.5
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHH
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQA 345 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~ 345 (584)
+++.+||+|+|.|.+|+++|+++.+.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~ 31 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL 31 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC
Confidence 34459999999999999998887663
No 274
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=56.45 E-value=11 Score=38.19 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=65.1
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||.|+|||..|..+|-+|... |+- ..+.|+|..-=..++- -+|.+.. +|....... ...+-.++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i----~~~~d~~~ 66 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKI----VGGADYSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEE----EEESCGGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeE----ecCCCHHH
Confidence 799999999998888777652 442 4699999742111110 1233221 222111110 01112345
Q ss_pred hcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007939 404 VRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (584)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----F--t----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpeda~~w 460 (584)
++. .|++|=+++. ||- | + +++++.++ +++...||.-.|||-. .+..-+++.
T Consensus 67 ~~~--aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~-~~~p~aivlvvsNPvd---~~t~i~~k~ 131 (294)
T 2x0j_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIV-ENAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHH-TTSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHH-hcCCceEEEEecCcch---hhHHhhHHH
Confidence 666 8888755543 342 1 1 35666665 4899999999999974 444455553
No 275
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=56.32 E-value=6 Score=39.17 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 579999999999999988765 354 59999987543
No 276
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=56.29 E-value=6.8 Score=39.77 Aligned_cols=32 Identities=34% Similarity=0.545 Sum_probs=25.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~ 33 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGG 33 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecC
Confidence 3799999999999999888663 53 57788764
No 277
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=56.12 E-value=5.4 Score=40.30 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=26.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999877654 464 588899873
No 278
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=56.02 E-value=7.1 Score=39.30 Aligned_cols=49 Identities=18% Similarity=0.310 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.|++..+.+.. ++|+|+|||..|...+.+.. ..|. ++++.+|+
T Consensus 151 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIKLG----DTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCCTT----CCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECC
Confidence 44555666766665544 59999999866654443332 3454 46888876
No 279
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=55.99 E-value=9.6 Score=38.20 Aligned_cols=98 Identities=28% Similarity=0.395 Sum_probs=50.9
Q ss_pred HHHHHHHHHH-HhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhh
Q 007939 303 ALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA 381 (584)
Q Consensus 303 ~LAgll~Alr-~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k 381 (584)
.++..+.+++ ..+. .. ++++|+|||..|..++++... .|. ++++.+|+. +.+
T Consensus 149 ~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~-----------~~~ 201 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN-----------PYR 201 (343)
T ss_dssp HHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC-----------HHH
T ss_pred HHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC-----------HHH
Confidence 4444556665 4333 55 899999998766655544332 353 368888763 122
Q ss_pred hccccccCC--cCCcccCCCHHHHhcc---cCCcEEEeecCCCCCCCHHHHHHh
Q 007939 382 APFAKDPGD--FMGLREGASLLEVVRK---VKPHVLLGLSGVGGVFNEEVLKAM 430 (584)
Q Consensus 382 ~~fA~~~~~--~~~~~~~~~L~evV~~---vkptvLIG~S~~~g~Fteevv~~M 430 (584)
..+++...+ +. ....++.+.++. -..|++|=+++.+ ...++.++.|
T Consensus 202 ~~~~~~la~~v~~--~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l 252 (343)
T 2dq4_A 202 LAFARPYADRLVN--PLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMAL 252 (343)
T ss_dssp HGGGTTTCSEEEC--TTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHE
T ss_pred HHHHHHhHHhccC--cCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHH
Confidence 222221100 00 012356666553 2578888776521 2234555555
No 280
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=55.89 E-value=6.9 Score=37.65 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|.||+..|..+.. .|. .++.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999987754 354 169999985
No 281
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=55.72 E-value=8 Score=38.46 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 689999999999999988754 353 699999864
No 282
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=55.69 E-value=6.7 Score=38.74 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.+||..+..+ |. +++++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988653 43 68888874
No 283
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=55.65 E-value=6.9 Score=36.95 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-+|+|+|+|.+|+-.|..+.. .|+ ++.++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 679999999999999887765 353 68889885
No 284
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=55.60 E-value=33 Score=37.21 Aligned_cols=122 Identities=24% Similarity=0.224 Sum_probs=74.6
Q ss_pred cCccccCc---chhHHHHHHHHHHHHHHh---------CC----C--CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHc
Q 007939 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL----S--LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA 350 (584)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~----~--l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~ 350 (584)
+.+.|--- ..+|=-++|-+|+..|.. |+ + -.+|.+.++.|+|.|..|..+|+.+...
T Consensus 90 i~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~----- 164 (529)
T 1ygy_A 90 VLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF----- 164 (529)
T ss_dssp CEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT-----
T ss_pred eEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC-----
Confidence 55555432 334555788888877631 10 0 1244459999999999999999887653
Q ss_pred CCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHH
Q 007939 351 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEV 426 (584)
Q Consensus 351 Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S----~~~g~Fteev 426 (584)
|+ +++.+|+.- +..+ +... +. ...++.|+++. .|+++=+- ...+.++++.
T Consensus 165 G~-------~V~~~d~~~---------~~~~---a~~~----g~-~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~ 218 (529)
T 1ygy_A 165 GA-------YVVAYDPYV---------SPAR---AAQL----GI-ELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEA 218 (529)
T ss_dssp TC-------EEEEECTTS---------CHHH---HHHH----TC-EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHH
T ss_pred CC-------EEEEECCCC---------ChhH---HHhc----Cc-EEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHH
Confidence 43 588888741 1111 1110 00 11368899987 88877432 2246788877
Q ss_pred HHHhhhcCCCCCeEEecCC
Q 007939 427 LKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 427 v~~M~~~~~erPIIFaLSN 445 (584)
+..|. +..+|.=.|.
T Consensus 219 ~~~~k----~g~ilin~ar 233 (529)
T 1ygy_A 219 LAKTK----PGVIIVNAAR 233 (529)
T ss_dssp HTTSC----TTEEEEECSC
T ss_pred HhCCC----CCCEEEECCC
Confidence 77773 4668877773
No 285
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=55.54 E-value=7.6 Score=37.67 Aligned_cols=86 Identities=10% Similarity=0.127 Sum_probs=41.5
Q ss_pred CCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCc-CCcccCC
Q 007939 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF-MGLREGA 398 (584)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~-~~~~~~~ 398 (584)
+|+..++||.||.+. -||...|+..+. ++|. +++++|+.-+ .+.+...+..+.+-. -+ -+..+..
T Consensus 23 ~l~~k~vlVTGasg~-~GIG~~ia~~l~-~~G~-------~V~~~~r~~~----~~~~~~l~~~~~~~~-~~~~Dl~~~~ 88 (280)
T 3nrc_A 23 FLAGKKILITGLLSN-KSIAYGIAKAMH-REGA-------ELAFTYVGQF----KDRVEKLCAEFNPAA-VLPCDVISDQ 88 (280)
T ss_dssp TTTTCEEEECCCCST-TCHHHHHHHHHH-HTTC-------EEEEEECTTC----HHHHHHHHGGGCCSE-EEECCTTCHH
T ss_pred ccCCCEEEEECCCCC-CCHHHHHHHHHH-HcCC-------EEEEeeCchH----HHHHHHHHHhcCCce-EEEeecCCHH
Confidence 344589999998431 123333444444 3453 6888888630 011111111111100 00 0011224
Q ss_pred CHHHHhccc-----CCcEEEeecCCC
Q 007939 399 SLLEVVRKV-----KPHVLLGLSGVG 419 (584)
Q Consensus 399 ~L~evV~~v-----kptvLIG~S~~~ 419 (584)
++.++++.+ ++|+||=..+..
T Consensus 89 ~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 89 EIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccC
Confidence 466666655 799999777654
No 286
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=55.34 E-value=7.4 Score=40.65 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 689999999999999977654 34 369999986
No 287
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=55.17 E-value=9.5 Score=40.28 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..+.+... . ..++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~--~-------~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG--D-------ANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG--G-------GSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC--C-------CCeEEEEECCC
Confidence 689999999999999999877530 0 14799999864
No 288
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=55.09 E-value=7.7 Score=40.55 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=51.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccccc-CCc----CCcccCC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDF----MGLREGA 398 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~-~~~----~~~~~~~ 398 (584)
.||+|+|||..|..+|+.|.+ .|- .-.+++++|++- +.+......+.... ... -+..+..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~~------~~~~~la~~l~~~~~~~~~~~~~D~~d~~ 66 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRTL------SKCQEIAQSIKAKGYGEIDITTVDADSIE 66 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESCH------HHHHHHHHHHHHTTCCCCEEEECCTTCHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECCH------HHHHHHHHHhhhhcCCceEEEEecCCCHH
Confidence 489999998555555554433 331 003688888741 11111111111100 000 0011235
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
++.++++..++|++|=+++. .+..+++++..+ ....+| -+|+
T Consensus 67 ~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~--~g~~vv-D~a~ 108 (405)
T 4ina_A 67 ELVALINEVKPQIVLNIALP--YQDLTIMEACLR--TGVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHH--HTCCEE-ESSC
T ss_pred HHHHHHHhhCCCEEEECCCc--ccChHHHHHHHH--hCCCEE-EecC
Confidence 68899998899999977642 235666666533 234444 2544
No 289
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=55.00 E-value=5.6 Score=38.72 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=25.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.+|+|+|||.||+..|..+.. .|+ ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 689999999999999988765 354 5888987
No 290
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=54.87 E-value=8.2 Score=38.98 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=25.3
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+|+|+|||.||+..|-.|... ..|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999998887653 0143 577787653
No 291
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=54.86 E-value=8.8 Score=36.39 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=23.0
Q ss_pred CCCCceEEEeCcc-hhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 320 DFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 320 dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++++.++||.||+ +.|+| ..|+..+. ++|. +++++|+.
T Consensus 11 ~~~~k~vlITGa~~~~giG--~~ia~~l~-~~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIA--YGIAKACK-REGA-------ELAFTYVG 49 (271)
T ss_dssp TTTTCEEEECCCCSTTSHH--HHHHHHHH-HTTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCCCcHH--HHHHHHHH-HcCC-------CEEEEecc
Confidence 3445999999985 23333 33444444 3453 68888875
No 292
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=54.82 E-value=7.2 Score=39.21 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
..|+|+|||.+|+.+|-.+.+ .|+ ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988765 354 59999987654
No 293
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=54.78 E-value=6.7 Score=41.35 Aligned_cols=38 Identities=24% Similarity=0.462 Sum_probs=28.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 58999999999999999887632 146531 138899886
No 294
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=54.65 E-value=20 Score=38.19 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G~-------~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----GA-------NVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----CC-------EEEEEECC
Confidence 5899999999999999888763 42 58888874
No 295
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=54.04 E-value=29 Score=34.09 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=17.0
Q ss_pred ceEEEeCcchhhHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (584)
.||+++|+|..|--+++.+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~ 24 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEE 24 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHh
Confidence 689999999988777776654
No 296
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=54.00 E-value=8 Score=40.27 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=28.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..|.+. ..| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 5899999999999999988764 113 37999998653
No 297
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=53.72 E-value=7.9 Score=38.86 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.+|+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999887653 54 578888754
No 298
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=53.60 E-value=8.1 Score=41.93 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=27.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 789999999999999988865 354 599999874
No 299
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=53.38 E-value=10 Score=38.65 Aligned_cols=23 Identities=22% Similarity=0.463 Sum_probs=20.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAA 346 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~ 346 (584)
.+|+|+|||-+|+..|..|.+..
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G 28 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEI 28 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHhc
Confidence 68999999999999999998864
No 300
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=53.36 E-value=8.1 Score=39.49 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=28.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999887765 364 269999987654
No 301
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=53.25 E-value=7.9 Score=42.61 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.6
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++.+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 34899999999999999887754 354 68899987
No 302
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=53.17 E-value=9.5 Score=38.99 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=27.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.+|+.+|-.|.+. .-|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCCC
Confidence 5799999999999999887653 0143 589999863
No 303
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=53.10 E-value=7.4 Score=46.07 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=31.9
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+|+. .||+++|+|..|.-||+.|+.+.+ ++|.++|.+
T Consensus 24 rL~~---s~VlIvG~GGlGseiak~La~aGV-----------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQT---SNVLILGLKGLGVEIAKNVVLAGV-----------KSMTVFDPE 60 (1015)
T ss_dssp HHTT---CEEEEECCSHHHHHHHHHHHHHCC-----------SEEEEECCS
T ss_pred HHhc---CEEEEECCChHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 4556 999999999999999999988744 689999986
No 304
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=53.05 E-value=9.3 Score=38.36 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.+++..+. .. ++|+|+|||..|..++++... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444556643333 55 899999998777666554432 353 36887775
No 305
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.68 E-value=8.6 Score=40.98 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=28.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..|.... .| .+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~---~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS---ET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 48999999999999998886531 12 37999998754
No 306
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=52.68 E-value=17 Score=36.55 Aligned_cols=48 Identities=25% Similarity=0.326 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.+++..+.+.. ++|+|.|||..|...+++.. ..|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~-----~~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQLG----TTVLVIGAGPIGLVSVLAAK-----AYGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHH-----HTTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH-----HcCC-------EEEEEcC
Confidence 44455666766655443 59999999866655444332 2343 3887775
No 307
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=52.68 E-value=7.5 Score=40.92 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999988877431 343 5889988643
No 308
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=52.64 E-value=9.3 Score=39.75 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5799999999999999877653 43 69999986
No 309
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=52.44 E-value=26 Score=34.32 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=53.8
Q ss_pred CCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCC
Q 007939 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (584)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~ 399 (584)
++..+|+|.|| |-.|..+++.|++ .|. +++.+|+.. ...++ .+..- + ..+..+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~~~~-----~~~~~--D---l~d~~~ 70 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SGTGG-----EEVVG--S---LEDGQA 70 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CSSCC-----SEEES--C---TTCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CCCCc-----cEEec--C---cCCHHH
Confidence 34489999998 7777667666654 353 588888752 11111 12111 0 112345
Q ss_pred HHHHhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCeEEecC
Q 007939 400 LLEVVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~~g~F--------------teevv~~M~~~~~erPIIFaLS 444 (584)
+.++++. +|++|=+.+....- |..+++++.+ ..-+.|||.=|
T Consensus 71 ~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS 126 (347)
T 4id9_A 71 LSDAIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASS 126 (347)
T ss_dssp HHHHHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 7888884 99999777643211 2457788754 44557888555
No 310
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=52.40 E-value=12 Score=37.06 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=26.7
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhh-cCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA-RNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA-~~~i~lvDs~G 368 (584)
.|+|+|||.+|+.+|-.|.+.. .+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G-----~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERY-----HSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH-----TTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhc-----ccc--CCCceEEEEECCC
Confidence 5899999999999998877642 000 0 03699999873
No 311
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=52.36 E-value=7.9 Score=39.93 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=27.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|... ..| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCC
Confidence 5899999999999999888762 123 3688888864
No 312
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=52.19 E-value=5.9 Score=38.24 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 689999999999999887754 353 57788854
No 313
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=52.18 E-value=13 Score=36.77 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.-|+|+|||.||+..|-.+... +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6799999999999999888653 3465 58889875
No 314
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=52.10 E-value=8.2 Score=40.63 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
-+++|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999888755 353 699999754
No 315
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=52.04 E-value=13 Score=39.51 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=28.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..|... ..| .+|.++|+..-
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~~ 47 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDPE 47 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCCC
Confidence 6899999999999999888653 112 47999998743
No 316
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=51.78 E-value=7.9 Score=42.06 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999988865 354 699999864
No 317
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=51.71 E-value=9.8 Score=39.50 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999887641 13 4799999864
No 318
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=51.67 E-value=12 Score=38.28 Aligned_cols=93 Identities=20% Similarity=0.288 Sum_probs=52.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
-||+++|||-.|--+|+.|.+ ..++.+.|... ..+... ++++.... .+ ..+..+|.++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~------~~~~~~-~~~~~~~~-~d-~~d~~~l~~~ 74 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN------ENLEKV-KEFATPLK-VD-ASNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH------HHHHHH-TTTSEEEE-CC-TTCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH------HHHHHH-hccCCcEE-Ee-cCCHHHHHHH
Confidence 589999999888766665532 13577777631 111111 11221100 00 0123568888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
+++ .|++|-+ .|..|..+++++-.+ +... +|=+|-
T Consensus 75 ~~~--~DvVi~~--~p~~~~~~v~~~~~~--~g~~-yvD~s~ 109 (365)
T 3abi_A 75 MKE--FELVIGA--LPGFLGFKSIKAAIK--SKVD-MVDVSF 109 (365)
T ss_dssp HTT--CSEEEEC--CCGGGHHHHHHHHHH--HTCE-EEECCC
T ss_pred HhC--CCEEEEe--cCCcccchHHHHHHh--cCcc-eEeeec
Confidence 887 7988854 466788999988754 2233 455664
No 319
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=51.64 E-value=9.5 Score=40.16 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=28.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 58999999999999999886531 13 479999987543
No 320
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=51.64 E-value=8.3 Score=39.96 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999877332 23 3688887754
No 321
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=51.61 E-value=42 Score=33.53 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=52.6
Q ss_pred CceEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 323 DQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 323 ~~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
..||+++| .|..|--+++++.. ..++ +=+..+|+.+--..++ ++. +++.-.. +.+-..++.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~----~~~~------eLv~~~d~~~~~~~G~-d~g----el~g~~~---gv~v~~dl~ 68 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLA----APDA------TLVGALDRTGSPQLGQ-DAG----AFLGKQT---GVALTDDIE 68 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHH----CTTE------EEEEEBCCTTCTTTTS-BTT----TTTTCCC---SCBCBCCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHh----CCCC------EEEEEEEecCcccccc-cHH----HHhCCCC---CceecCCHH
Confidence 37999999 79999888887765 2333 1244567653211111 111 1111000 112346799
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007939 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIF 441 (584)
++++. |||+|=+|. |.+. .+.++...+ +..|+|.
T Consensus 69 ~ll~~--~DVVIDfT~-p~a~-~~~~~~al~--~G~~vVi 102 (272)
T 4f3y_A 69 RVCAE--ADYLIDFTL-PEGT-LVHLDAALR--HDVKLVI 102 (272)
T ss_dssp HHHHH--CSEEEECSC-HHHH-HHHHHHHHH--HTCEEEE
T ss_pred HHhcC--CCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEE
Confidence 98885 999998874 3332 445555433 4567775
No 322
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=51.51 E-value=8.5 Score=37.31 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=24.0
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-|+|+|||.||+-.|..+.. .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 47999999999988866544 454 58889874
No 323
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=51.37 E-value=8.1 Score=40.99 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 579999999999999988765 365 589999864
No 324
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=51.37 E-value=9.4 Score=40.33 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 57999999999999998886630 0142 699999874
No 325
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.28 E-value=7.5 Score=40.54 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999977654 354 69999986
No 326
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=51.17 E-value=10 Score=39.26 Aligned_cols=35 Identities=14% Similarity=0.347 Sum_probs=27.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887641 13 47999998653
No 327
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.11 E-value=10 Score=42.19 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|+|.||+..|..+... |. ++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 6899999999999999888663 43 699999863
No 328
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=51.07 E-value=7.9 Score=40.59 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+++|+|+|.||+..|..+.+ .|. ++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g~-------~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LGL-------KVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988754 343 699999863
No 329
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=50.79 E-value=8.2 Score=40.02 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+-.|-.|... |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4799999999999998777653 54 68888875
No 330
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=50.54 E-value=9.6 Score=38.51 Aligned_cols=32 Identities=31% Similarity=0.406 Sum_probs=25.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888663 5 3588888763
No 331
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=50.28 E-value=7.6 Score=38.17 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=25.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|.||+..|..+.. .|+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 689999999999999988765 354 57888864
No 332
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=50.26 E-value=18 Score=36.83 Aligned_cols=105 Identities=23% Similarity=0.360 Sum_probs=61.6
Q ss_pred eEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007939 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 325 riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r-~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
||.|+| +|..|..+|-+|... +++- ..+.|+|..-. .++. -+|.+ .++ +. ...+. ...+..+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~~-----~el~L~Di~~~-~~G~a~Dl~~--~~~--~~-~v~~~-~~~~~~~ 65 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPSG-----SELSLYDIAPV-TPGVAVDLSH--IPT--AV-KIKGF-SGEDATP 65 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCTT-----EEEEEECSSTT-HHHHHHHHHT--SCS--SE-EEEEE-CSSCCHH
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCCC-----ceEEEEecCCC-chhHHHHhhC--CCC--Cc-eEEEe-cCCCcHH
Confidence 799999 799999988777442 2332 47999999641 1110 01211 011 10 00000 0124677
Q ss_pred HhcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 403 VVRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~---g~-----F--t----eevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
+.++ .|+.|=+.+.+ |- | | +++++.+.+ ++..-+|+-.|||..
T Consensus 66 ~~~~--aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 66 ALEG--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAK-TCPKACIGIITNPVN 122 (312)
T ss_dssp HHTT--CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEecCcch
Confidence 8888 89887555433 31 1 2 455666654 788889999999975
No 333
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=50.23 E-value=9.7 Score=38.75 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=25.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+|+|+|||.+|+..|-.|.+ .|. ++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G~-------~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NGH-------EIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 79999999999999988865 353 588888753
No 334
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=50.23 E-value=9.8 Score=39.93 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 689999999999999988765 343 69999986
No 335
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=50.16 E-value=9.2 Score=39.75 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 479999999999999977654 353 699999873
No 336
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=50.16 E-value=12 Score=38.63 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=27.0
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..+|+|+|||-+|+..|..|.+. |- ..++.++++.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~ 38 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAG 38 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECC
Confidence 37899999999999999888764 41 0367788875
No 337
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=50.04 E-value=9.2 Score=39.97 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+++|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQ-----LGF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999988765 253 699999874
No 338
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=49.76 E-value=8.9 Score=40.38 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 43 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS-----YGA-------KTLLVEAK 43 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TSC-------CEEEEESS
T ss_pred CCEEEEcCCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 689999999999999988765 253 69999986
No 339
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=49.68 E-value=8.8 Score=41.29 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=28.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+-.|-.|..... .|+ +|.++|+.-.
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 689999999999999988876420 343 6999998643
No 340
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=49.54 E-value=9.2 Score=40.86 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 6899999999999999887653 43 699999874
No 341
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=49.37 E-value=8.7 Score=36.94 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.. .|+ ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999887654 353 57777653
No 342
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=49.27 E-value=37 Score=33.94 Aligned_cols=78 Identities=15% Similarity=0.078 Sum_probs=49.0
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||+++|+ |..|--+++.+.+ .|. +-++.+|.+.- + + ..+ +.+-..++.|
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g-~------~~~--------G~~vy~sl~e 58 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---G-T------THL--------GLPVFNTVRE 58 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-C------EET--------TEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---c-c------eeC--------CeeccCCHHH
Confidence 79999999 9887666555443 353 24677777411 0 0 001 1123467999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~ 432 (584)
+.+..+||+.|= .+ |..+..+++++..+
T Consensus 59 l~~~~~~D~viI-~t-P~~~~~~~~~ea~~ 86 (288)
T 2nu8_A 59 AVAATGATASVI-YV-PAPFCKDSILEAID 86 (288)
T ss_dssp HHHHHCCCEEEE-CC-CGGGHHHHHHHHHH
T ss_pred HhhcCCCCEEEE-ec-CHHHHHHHHHHHHH
Confidence 988556998873 33 56688888888765
No 343
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=49.25 E-value=14 Score=38.25 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..|.+ .|.. .++.++|+.
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 789999999999999988765 3542 268899986
No 344
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=49.13 E-value=10 Score=39.60 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999977654 353 699999873
No 345
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.85 E-value=8.8 Score=39.91 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 479999999999999977754 353 69999986
No 346
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=48.81 E-value=24 Score=35.79 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
...+.+++..+..... ++++|.|+|..|..++++... .|. +++.+|+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3445667766655345 799999998776655554432 342 5887775
No 347
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=48.67 E-value=7.7 Score=37.91 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=27.6
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|++.++||+|+|..|..-++.|+.+ | .++.++|..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 4449999999999998888888764 3 268888874
No 348
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=48.45 E-value=6.6 Score=38.80 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 47999999999999988876510 1343 68888876
No 349
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=48.38 E-value=11 Score=34.74 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=52.4
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChh-----hhccccccCCcCCcccC
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 397 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~-----k~~fA~~~~~~~~~~~~ 397 (584)
++|+|.|| |-.|..+++.|.+ +.|. ++++++++.- +.+... +..+..- + ..+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g~-------~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D---~~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTDM-------HITLYGRQLK-----TRIPPEIIDHERVTVIEG--S---FQNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCCC-------EEEEEESSHH-----HHSCHHHHTSTTEEEEEC--C---TTCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCCc-------eEEEEecCcc-----ccchhhccCCCceEEEEC--C---CCCH
Confidence 46999996 7777777777762 2453 6888887511 011111 0111110 0 1123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEe
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 442 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFa 442 (584)
.++.++++. +|++|=+.+..+.-++.+++.|.+ ..-+-|||.
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~-~~~~~iv~i 106 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSR-XNIRRVIGV 106 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHh-cCCCeEEEE
Confidence 567888875 899997765432226778888854 333345553
No 350
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=48.34 E-value=9.1 Score=40.08 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 589999999999998877654 354 6899998654
No 351
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=48.05 E-value=26 Score=35.95 Aligned_cols=49 Identities=18% Similarity=0.190 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.|++..+.+. . ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 218 (398)
T 2dph_A 170 ILPTGFHGCVSAGVKP-G---SHVYIAGAGPVGRCAAAGARL-----LGA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred HHHHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 3444556666554443 3 599999998777655544432 243 37888885
No 352
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=47.91 E-value=9 Score=40.00 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 689999999999999987754 34 369999986
No 353
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=47.87 E-value=9.8 Score=40.62 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=27.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|-.|..... .|+ ++.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999988765310 354 699999854
No 354
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=47.71 E-value=11 Score=39.10 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=28.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 689999999999999988765 3542 37999997643
No 355
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=47.67 E-value=10 Score=40.69 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.+|+..|..|.+. |+ ++.++|+..
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 6899999999999999888653 54 588999864
No 356
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=47.43 E-value=11 Score=40.07 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=27.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 689999999999999887765 354 6889998643
No 357
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=47.38 E-value=14 Score=39.91 Aligned_cols=34 Identities=32% Similarity=0.563 Sum_probs=19.9
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+.+++|.|||.+|.++ +.++. +.|. +++++++.
T Consensus 363 ~~k~vlV~GaGGig~ai----a~~L~-~~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKAL----AYGAK-EKGA-------KVVIANRT 396 (523)
T ss_dssp ---CEEEECCSHHHHHH----HHHHH-HHCC--------CEEEESS
T ss_pred CCCEEEEECCcHHHHHH----HHHHH-HCCC-------EEEEEECC
Confidence 33899999998444444 44444 3453 48888874
No 358
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=47.28 E-value=9.7 Score=40.65 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.4
Q ss_pred eEEEeCcchhhHHHHHHHHHHHH
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~ 347 (584)
-||++|||.+|+++|-.|.+...
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC
T ss_pred cEEEEcccHHHHHHHHHHHhcCC
Confidence 38999999999999988876543
No 359
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.66 E-value=12 Score=39.04 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999888765 353 699999853
No 360
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.59 E-value=11 Score=40.10 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988765 24 3699999863
No 361
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.53 E-value=30 Score=34.90 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=22.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++|+|.|||..|..+++++.. .|. +++.+|+.
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRT-----YGL-------EVWMANRR 213 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 899999997766665554433 242 68888874
No 362
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=46.43 E-value=24 Score=34.98 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 301 aV~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+.++..+.+++....--.. ++++|.|| |..|..+++++.. .|. +++.+|+.
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 33445556666533332334 79999996 7777766665543 342 58888774
No 363
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=46.40 E-value=11 Score=38.79 Aligned_cols=34 Identities=26% Similarity=0.540 Sum_probs=27.1
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+.+|+|+|||.+|+..|..|.+. | .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 36899999999999998887642 4 3688888853
No 364
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.37 E-value=12 Score=39.24 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=27.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
-.++|+|||.||+..|..+.+ .|+ ++.++|++.-
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 579999999999999987754 354 6999996553
No 365
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=46.16 E-value=25 Score=35.95 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 304 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++..+.+++..+.+. . ++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVGP-G---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCC-C---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 445566666544433 3 699999998777555443332 353 46888876
No 366
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=46.07 E-value=5.4 Score=39.60 Aligned_cols=99 Identities=17% Similarity=0.319 Sum_probs=56.6
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhh----ccccccCC-cCC-ccc
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA----PFAKDPGD-FMG-LRE 396 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~----~fA~~~~~-~~~-~~~ 396 (584)
.+|+|.|| |-.|-.|++.|++ .| .+++.+++..- -.+.+. .+....-. +.+ ..+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~-------~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP-------RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC-------CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC-------CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 79999998 8777777776654 34 35888887520 111111 11111000 000 123
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCeEE
Q 007939 397 GASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIF 441 (584)
Q Consensus 397 ~~~L~evV~~vkptvLIG~S~~~g~-Fteevv~~M~~~~~erPIIF 441 (584)
..+|.++++..++|++|=+.+.... -+..+++++.+..+-+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3568889986679999987764322 45788888865331334554
No 367
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.01 E-value=11 Score=39.38 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=25.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+++|+|||.||+..|..+... | .++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 5799999999999999776553 4 369999983
No 368
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=46.00 E-value=9.4 Score=41.40 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999988862 2454 699999864
No 369
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=45.98 E-value=18 Score=34.89 Aligned_cols=87 Identities=16% Similarity=0.278 Sum_probs=51.0
Q ss_pred CceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
..+|+|.|| |-.|..+++.|++ .|. +++.+++. ..-++ .+..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~-----------------~d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNL-----------------LDSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCT-----------------TCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCc-----------------cCHHHHH
Confidence 378999996 6666666655543 342 46666543 00011 1224577
Q ss_pred HHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 402 EVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 402 evV~~vkptvLIG~S~~~g~-----------------Fteevv~~M~~~~~erPIIFaLS 444 (584)
++++.+++|++|=+.+..+. -|..+++++.+ ..-+.+||.=|
T Consensus 49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 107 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcc
Confidence 88886679999988775431 13456666643 33456777544
No 370
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=45.66 E-value=47 Score=32.06 Aligned_cols=94 Identities=19% Similarity=0.329 Sum_probs=54.0
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+...+. ...+..- + .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~~~--~~~~~~~--D---l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKAIN--DYEYRVS--D---YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC-------CCEEEEC--C---CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCcccCC--ceEEEEc--c---cc-HHHHHH
Confidence 58999996 7777777666654 34 268888885 1111122 1122111 0 12 345777
Q ss_pred HhcccCCcEEEeecCCCCC------------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 403 VVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~------------Fteevv~~M~~~~~erPIIFaLS 444 (584)
+++ ++|++|=+.+..+. -+..+++++.+ ..-+-+||.=|
T Consensus 59 ~~~--~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS 109 (311)
T 3m2p_A 59 QLN--DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYE-NNISNIVYAST 109 (311)
T ss_dssp HTT--TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred hhc--CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 887 59999987765332 14677888754 44445887443
No 371
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=45.59 E-value=22 Score=34.81 Aligned_cols=107 Identities=14% Similarity=0.183 Sum_probs=56.2
Q ss_pred CCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccC-CCCCChhhhccccccCCcCCcc
Q 007939 318 LTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLR 395 (584)
Q Consensus 318 l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~-r~~l~~~k~~fA~~~~~~~~~~ 395 (584)
..+|.+.+|+|.|| |-.|..+++.|++ .| .+++.+|+..--... ...+. ...+..- + ..
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~l~--~v~~~~~--D---l~ 75 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFATGKREVLPPVA--GLSVIEG--S---VT 75 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCSSSCGGGSCSCT--TEEEEEC--C---TT
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCCccchhhhhccC--CceEEEe--e---CC
Confidence 34455589999998 6566555555543 34 368888874100000 01110 1111110 0 11
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCC-C------------CHHHHHHhhhcCCCCCeEEecC
Q 007939 396 EGASLLEVVRKVKPHVLLGLSGVGGV-F------------NEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 396 ~~~~L~evV~~vkptvLIG~S~~~g~-F------------teevv~~M~~~~~erPIIFaLS 444 (584)
+..++.++++.+++|++|=+.+.... - +..+++++.+ ..-+.|||.=|
T Consensus 76 d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 136 (330)
T 2pzm_A 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASK-AGVKRLLNFQT 136 (330)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-HTCSEEEEEEE
T ss_pred CHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHH-cCCCEEEEecC
Confidence 23457788886679999988765432 0 2346666643 33456777543
No 372
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=45.56 E-value=18 Score=36.77 Aligned_cols=123 Identities=16% Similarity=0.112 Sum_probs=75.1
Q ss_pred cCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhhHHHHHHHHHHHH
Q 007939 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (584)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (584)
+.+.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 91 i~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 168 (320)
T 1gdh_A 91 IKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF-- 168 (320)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT--
T ss_pred cEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 55555432 334555788888877642 10 11245569999999999999999887643
Q ss_pred HHcCCChhhhcCcEEEEec-CcccccCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCC
Q 007939 348 RMAGNNDAFARNKFFLLDK-DGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVF 422 (584)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs-~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~evV~~vkptvLIG~S~----~~g~F 422 (584)
|. +++.+|+ .. ... .++... .....++.|+++. .|+++=.-- ..+.+
T Consensus 169 ---G~-------~V~~~d~~~~---------~~~---~~~~~g----~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 169 ---DM-------DIDYFDTHRA---------SSS---DEASYQ----ATFHDSLDSLLSV--SQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp ---TC-------EEEEECSSCC---------CHH---HHHHHT----CEECSSHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred ---CC-------EEEEECCCCc---------Chh---hhhhcC----cEEcCCHHHHHhh--CCEEEEeccCchHHHhhc
Confidence 42 6888887 41 110 111100 0012368898887 888774321 23678
Q ss_pred CHHHHHHhhhcCCCCCeEEecCC
Q 007939 423 NEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 423 teevv~~M~~~~~erPIIFaLSN 445 (584)
+++.++.|. +.-+|.-.|.
T Consensus 221 ~~~~l~~mk----~gailIn~ar 239 (320)
T 1gdh_A 221 NKATIKSLP----QGAIVVNTAR 239 (320)
T ss_dssp SHHHHTTSC----TTEEEEECSC
T ss_pred CHHHHhhCC----CCcEEEECCC
Confidence 888888883 4567777776
No 373
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.51 E-value=12 Score=36.18 Aligned_cols=108 Identities=17% Similarity=0.111 Sum_probs=54.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+... | .+++++|++.--. +.+.....................+..|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 68 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPAHI---EAIRKNGLIADFNGEEVVANLPIFSPEEI 68 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHHHH---HHHHHHCEEEEETTEEEEECCCEECGGGC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHHHH---HHHHhCCEEEEeCCCeeEecceeecchhh
Confidence 4899999999999999887653 4 2688888742100 00100000000000000000000111222
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
.+.+ +.|++| ++..+ ...+++++.++....+..+|..++|...
T Consensus 69 ~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 69 DHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred cccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 2211 377766 33322 2457888887654455678888888654
No 374
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=45.48 E-value=3.9 Score=41.18 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=76.4
Q ss_pred ceEEEEecCceeeccCCCCCCcccccchhhhhhhhhcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHh
Q 007939 172 VDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSI 251 (584)
Q Consensus 172 v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~ 251 (584)
.++.+|||.+.=|--...-- -||. .+|+.+-+| ++..+++ . +--
T Consensus 4 Mki~IvtDSt~dl~~e~~~~----------------~~I~---vvPl~v~~~--~~~y~D~-------------~--di~ 47 (285)
T 3lup_A 4 MKLALITDTSAYLPEAIENH----------------EDVY---VLDIPIIID--GKTYIEG-------------Q--NLT 47 (285)
T ss_dssp CCEEEEEETTBCCCTTTTTC----------------TTEE---EECCCEESS--SSCCCBT-------------T--TBC
T ss_pred CCEEEEEECCCCCCHHHHHH----------------CCeE---EEEEEEEEC--CEEEecC-------------C--CCC
Confidence 47999999987553222111 1344 677777664 3333332 1 112
Q ss_pred HHHHHHHHHH--HCCCe-eeEeccCCCChHHHHHHHHhh----cc--CccccCcchhHHHHHHHHHHHHHHhCCCCCCCC
Q 007939 252 VDEFMEAVHA--RWPKA-IVQFEDFQMKWAFETLERYRK----RF--CMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFA 322 (584)
Q Consensus 252 vdefv~av~~--~~P~~-lIqfEDf~~~nAf~lL~ryr~----~~--~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~ 322 (584)
.+||.+.+++ ..|+. ....+|| .++| +++.+ .+ .++..-+=||=-.+. .......+
T Consensus 48 ~~efy~~~~~~~~~p~TSqps~~~~--~~~f---~~l~~~g~d~ii~i~iSs~LSGTy~sA~--------~a~~~~~~-- 112 (285)
T 3lup_A 48 LDQYYDKLAASKELPKTSQPSLAEL--DDLL---CQLEKEGYTHVLGLFIAAGISGFWQNIQ--------FLIEEHPN-- 112 (285)
T ss_dssp HHHHHHHHHHCSSCCEECCCCHHHH--HHHH---HHHHHTTCCEEEECCSCGGGCTHHHHHT--------THHHHCTT--
T ss_pred HHHHHHHHHhCCCCceeCCCCHHHH--HHHH---HHHHHcCCCeEEEEeCCCchhHHHHHHH--------HHHHhCCC--
Confidence 5888888875 25764 4444454 2333 22222 22 344555555533322 11123445
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHH-HHcCCChhhhcC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAA-RMAGNNDAFARN 359 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~-~~~Gls~eeA~~ 359 (584)
.+|-++-..+++.|..-++..+.. .++|.|.||..+
T Consensus 113 -~~I~ViDS~~~s~g~g~~v~~A~~l~~~G~s~eeI~~ 149 (285)
T 3lup_A 113 -LTIAFPDTKITSAPQGNLVRNALMCSREGMDFDVIVN 149 (285)
T ss_dssp -SEEECCCCCCCHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred -CCEEEEcCCchHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 789999998888888877776532 268999887543
No 375
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=45.41 E-value=9.6 Score=36.60 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.6
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.|+|+|+|.||+..|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999988865543 454 47788874
No 376
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=45.36 E-value=5.9 Score=42.92 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=76.7
Q ss_pred ccccccCChhhHHHHHhcCCCCCceEEE-EecCceeeccCCCCCCcccccchh-hhhhhh-----hcCCCCCCceeEEee
Q 007939 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIV-LTDGSRILGLGDLGVQGIGIPIGK-LDVYVA-----AAGINPQRILPVMLD 221 (584)
Q Consensus 149 Glyis~~D~g~i~~~l~nwp~~~v~viV-VTDG~rILGLGDlG~~Gm~I~iGK-l~LY~a-----~gGI~P~~~LPV~LD 221 (584)
|-|....|...+..+|+.. ++++++ .+-|+.+=-+-++|-.-.-|.++. ...|++ --|+. .+-+.
T Consensus 227 G~~~~~gD~~eik~lL~~~---Gi~v~~~~~g~~t~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP---~i~~~-- 298 (492)
T 3u7q_A 227 GDYNIGGDAWSSRILLEEM---GLRCVAQWSGDGSISEIELTPKVKLNLVHCYRSMNYISRHMEEKYGIP---WMEYN-- 298 (492)
T ss_dssp EECCBTTTTHHHHHHHHHT---TCEEEEEEETTCCHHHHHHGGGCSEEEESCHHHHHHHHHHHHHHHCCC---EEECC--
T ss_pred CCCCChhhHHHHHHHHHHC---CCeEEEEeCCCCCHHHHHhhhcCcEEEEEChHHHHHHHHHHHHHhCCc---eEecC--
Confidence 4455566777888888864 677764 455555545555554444555442 333332 12454 22111
Q ss_pred ccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCChHHHHHHHHhhccCccccCcchhHH
Q 007939 222 VGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAG 301 (584)
Q Consensus 222 vGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaa 301 (584)
| +|+ +-.++|+..+.+.+.. ++ ...+-+++++.|.++
T Consensus 299 -----------p--~G~-----------~~T~~~L~~ia~~~g~------~~-~~~~e~~i~~e~~~~------------ 335 (492)
T 3u7q_A 299 -----------F--FGP-----------TKTIESLRAIAAKFDE------SI-QKKCEEVIAKYKPEW------------ 335 (492)
T ss_dssp -----------C--SSH-----------HHHHHHHHHHHTTSCH------HH-HHHHHHHHHHHHHHH------------
T ss_pred -----------c--cCH-----------HHHHHHHHHHHHHhCC------cc-hHHHHHHHHHHHHHH------------
Confidence 1 221 2367788887776631 00 022334566655542
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCC
Q 007939 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGN 352 (584)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gl 352 (584)
..++.-....|.. .|++|+|.+.-..++++.+. +.|+
T Consensus 336 ------~~~l~~~~~~l~G---Krv~i~g~~~~~~~la~~L~-----ElGm 372 (492)
T 3u7q_A 336 ------EAVVAKYRPRLEG---KRVMLYIGGLRPRHVIGAYE-----DLGM 372 (492)
T ss_dssp ------HHHHHHHHHHHTT---CEEEECBSSSHHHHTHHHHH-----TTTC
T ss_pred ------HHHHHHHHHHhCC---CEEEEECCCchHHHHHHHHH-----HCCC
Confidence 2333333344555 89999999988889888763 3576
No 377
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=45.08 E-value=24 Score=35.89 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=21.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|||..|.-.+.+... .|. ++++.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999998776555444332 354 47888875
No 378
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=44.95 E-value=13 Score=39.09 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 689999999999999987765 353 68999984
No 379
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=44.89 E-value=13 Score=39.12 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999976654 353 599999853
No 380
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=44.87 E-value=26 Score=38.28 Aligned_cols=97 Identities=9% Similarity=0.211 Sum_probs=55.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCCh-hhhccccccCCcCCcccCCC---
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGAS--- 399 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~-~k~~fA~~~~~~~~~~~~~~--- 399 (584)
.||||+|||+.|-++|.+|++- .++.. .+|.+.|+.--. + ++.+ ....+.... + +..+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~~~~---~-~~~~~~g~~~~~~~--V----dadnv~~ 75 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAEGTK---V-DVAQQYGVSFKLQQ--I----TPQNYLE 75 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESSCCS---C-CHHHHHTCEEEECC--C----CTTTHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccchhh---h-hHHhhcCCceeEEe--c----cchhHHH
Confidence 5999999999999999999773 44432 368888874211 1 1111 111221110 0 1122
Q ss_pred -HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 400 -LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 400 -L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
|..+|+. +|++|=+| ...++.+++++-.+ ..=-.+-++|
T Consensus 76 ~l~aLl~~--~DvVIN~s--~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 76 VIGSTLEE--NDFLIDVS--IGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp HTGGGCCT--TCEEEECC--SSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred HHHHHhcC--CCEEEECC--ccccCHHHHHHHHH---cCCCEEECCC
Confidence 2335554 59999655 56677788887644 2223455565
No 381
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=44.62 E-value=12 Score=41.88 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988765 343 599999853
No 382
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=44.54 E-value=11 Score=40.03 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+.-
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 689999999999999887755 464 588888764
No 383
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=44.09 E-value=14 Score=39.07 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=27.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|.||+-.|..+... |- ..++.++|+.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 6899999999999999988763 31 1479999986
No 384
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=44.06 E-value=14 Score=37.08 Aligned_cols=99 Identities=18% Similarity=0.236 Sum_probs=54.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc---ccCCcCCcccCCCH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGDFMGLREGASL 400 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~---~~~~~~~~~~~~~L 400 (584)
.||.|+|+|+.|..+|..|..+ | .+++++|+..- .....++...+ +...+ +..-..++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~------~~~~l~~~g~~~~~~~~~~-~~~~~~~~ 75 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE------IVDLINVSHTSPYVEESKI-TVRATNDL 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH------HHHHHHHHSCBTTBTTCCC-CSEEESCG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH------HHHHHHHhCCcccCCCCee-eEEEeCCH
Confidence 7999999999999999988764 4 36888887421 01100000000 00000 00012345
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007939 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~ 449 (584)
.| ++. .|++| ++. +....+++++.++ . +..+|..++|..+.
T Consensus 76 ~~-~~~--aDvVi-l~v-k~~~~~~v~~~l~--~-~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 76 EE-IKK--EDILV-IAI-PVQYIREHLLRLP--V-KPSMVLNLSKGIEI 116 (335)
T ss_dssp GG-CCT--TEEEE-ECS-CGGGHHHHHTTCS--S-CCSEEEECCCCCCT
T ss_pred HH-hcC--CCEEE-EEC-CHHHHHHHHHHhC--c-CCCEEEEEeCCCCC
Confidence 55 544 67655 332 3356677777763 2 45577888886543
No 385
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=44.00 E-value=51 Score=32.60 Aligned_cols=100 Identities=18% Similarity=0.248 Sum_probs=57.1
Q ss_pred CCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCCh-hhhccccccCCcCCcc-cCC
Q 007939 322 ADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLR-EGA 398 (584)
Q Consensus 322 ~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~-~k~~fA~~~~~~~~~~-~~~ 398 (584)
...+|+|.|| |-.|..+++.|++. .| .+++.+|+.. .....+.. ....+..- + .. +..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~---~~~~~~~~~~~v~~~~~--D---l~~d~~ 83 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT---DRLGDLVKHERMHFFEG--D---ITINKE 83 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC---TTTGGGGGSTTEEEEEC--C---TTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh---hhhhhhccCCCeEEEeC--c---cCCCHH
Confidence 3389999996 77777777766552 23 3688888742 10011110 11122211 0 11 234
Q ss_pred CHHHHhcccCCcEEEeecCCCC----------------CCCHHHHHHhhhcCCCCCeEEecC
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGG----------------VFNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g----------------~Fteevv~~M~~~~~erPIIFaLS 444 (584)
++.++++. +|++|=+.+... .-|..+++++.+ .. +.+||.=|
T Consensus 84 ~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~-~~~v~~SS 141 (372)
T 3slg_A 84 WVEYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK-YG-KHLVFPST 141 (372)
T ss_dssp HHHHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHH-HT-CEEEEECC
T ss_pred HHHHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEeCc
Confidence 57788885 999997665432 234678888854 44 77888655
No 386
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=43.99 E-value=13 Score=36.07 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=23.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
--++|+|||.||+-.|-.+. +.|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~la-----r~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLG-----RARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 45899999999988774433 3454 58899975
No 387
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=43.87 E-value=14 Score=39.43 Aligned_cols=32 Identities=31% Similarity=0.461 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.+|+-.|-.|.. .|+ ++.++|+.
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 789999999999999888765 465 47777765
No 388
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=43.76 E-value=12 Score=39.71 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=19.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQA 345 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (584)
.+|+|+|||.||+..|..|.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 6899999999999999988764
No 389
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=43.56 E-value=21 Score=35.17 Aligned_cols=107 Identities=18% Similarity=0.232 Sum_probs=58.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCC-hhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-PAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~-~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||.|+|||+.|..+|..|.. .|.- ..++++|+.---.+. ..++ .+..++..+. .. ....+ .+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~~~~~~-~~~~~~~~~~~~~~~-~v---~~~~~-~~ 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAKERVEA-EVLDMQHGSSFYPTV-SI---DGSDD-PE 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHH-HHHHHHHTGGGSTTC-EE---EEESC-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHH-HHHHHHhhhhhcCCe-EE---EeCCC-HH
Confidence 589999999999999887754 3431 379999986310000 0000 0101111110 00 00112 24
Q ss_pred HhcccCCcEEEeecCCCCCC--C------------HHHHHHhhhcCCCCCeEEecCCCCCc
Q 007939 403 VVRKVKPHVLLGLSGVGGVF--N------------EEVLKAMRESDSVKPAIFAMSNPTMN 449 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~F--t------------eevv~~M~~~~~erPIIFaLSNPt~~ 449 (584)
+++. .|++|=+...+..- + +++++.|++ +++..+|+.++||...
T Consensus 72 ~~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 72 ICRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPVDI 129 (319)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCchHH
Confidence 5554 78877433322210 1 178888865 5778899999999863
No 390
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=43.36 E-value=14 Score=38.67 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.+|+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999888653 53 68888876
No 391
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.20 E-value=12 Score=34.81 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=25.2
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
||+|+|+|..|..+|+.|... | .+++++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 799999999999999887653 4 368899974
No 392
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=43.17 E-value=42 Score=32.90 Aligned_cols=104 Identities=14% Similarity=0.281 Sum_probs=54.9
Q ss_pred CCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCCh-hhhccccccCCcCCcccCC
Q 007939 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~-~k~~fA~~~~~~~~~~~~~ 398 (584)
+...+|+|.|| |-.|..+++.|++ .| .+++.+|+..- ...+.+.. .+..+..- + ..+..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~l~~~~~~~~~~~--D---l~d~~ 79 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT--GRREHLKDHPNLTFVEG--S---IADHA 79 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS--CCGGGSCCCTTEEEEEC--C---TTCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc--cchhhHhhcCCceEEEE--e---CCCHH
Confidence 34489999996 5556555555543 35 36888887520 00011111 01111111 1 11234
Q ss_pred CHHHHhcccCCcEEEeecCCCCC--C-----------CHHHHHHhhhcCCCCCeEEecC
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGGV--F-----------NEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g~--F-----------teevv~~M~~~~~erPIIFaLS 444 (584)
++.++++..++|++|=+.+.... . +..+++++.+ ..-+.|||.=|
T Consensus 80 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 137 (333)
T 2q1w_A 80 LVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKK-NNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHH-hCCCEEEEECc
Confidence 57788887789999987764332 1 3456677643 33457887533
No 393
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=43.03 E-value=12 Score=36.48 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
..|+|+|||.+|+..|..+.+. .|+ ++.++|+..-
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCCC
Confidence 6899999999999998776541 143 5889998643
No 394
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=42.98 E-value=11 Score=39.94 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=26.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999998877654 464 588899874
No 395
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=42.87 E-value=9 Score=37.73 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=26.7
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
+..|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 368999999999999988775 1 43 699999874
No 396
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=42.72 E-value=30 Score=32.32 Aligned_cols=99 Identities=18% Similarity=0.255 Sum_probs=51.2
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.+|+|.|| |-.|..+++.|++ .|- -++++++++.- .-..+......+..- + ..+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--D---l~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--D---VLNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--C---TTCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--c---CCCHHHHHH
Confidence 68999996 5555555555443 341 25777777521 001111111111111 1 112356888
Q ss_pred HhcccCCcEEEeecCCCCC--CCHHHHHHhhhcCCCCCeEEecC
Q 007939 403 VVRKVKPHVLLGLSGVGGV--FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--Fteevv~~M~~~~~erPIIFaLS 444 (584)
+++. .|++|=+.+.... -++.+++.|.+ ..-+-|||.=|
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~-~~~~~iV~iSS 125 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKA-CDVKRLIFVLS 125 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHH-cCCCEEEEEec
Confidence 8886 7999966553322 24667888854 33334666433
No 397
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=42.71 E-value=10 Score=39.34 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 579999999999999877654 353 5899998653
No 398
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=42.65 E-value=27 Score=35.02 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHH-HHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 298 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 298 GTaaV~LAgll~Al-r~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++-.+.++..+.++ +..+.+... .++++|.|| |..|..+++++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~--~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGS--NKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTS--CCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCC--ccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334555566667 454444430 049999998 7776666554443 353 368888873
No 399
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=42.53 E-value=28 Score=33.23 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=54.2
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||+|.|| |-.|..+++.|.+ +.| .+++.++++.- .-..+......+.+- ++ .+..+|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~~---~~~~~~~~~v~~~~~--D~---~d~~~l~~~ 62 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNVE---KVPDDWRGKVSVRQL--DY---FNQESMVEA 62 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSGG---GSCGGGBTTBEEEEC--CT---TCHHHHHHH
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCHH---HHHHhhhCCCEEEEc--CC---CCHHHHHHH
Confidence 6899997 7777777766433 114 36777776421 001111111122111 11 123568888
Q ss_pred hcccCCcEEEeecCCCCC------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 404 VRKVKPHVLLGLSGVGGV------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~------Fteevv~~M~~~~~erPIIFaLS 444 (584)
++. .|++|=+++.... -++.++++|.+ ..-+.|||.=|
T Consensus 63 ~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~-~gv~~iv~~Ss 106 (289)
T 3e48_A 63 FKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGY 106 (289)
T ss_dssp TTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 886 7999977764321 24678888864 44456777433
No 400
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=42.32 E-value=13 Score=38.78 Aligned_cols=32 Identities=25% Similarity=0.489 Sum_probs=26.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~ 52 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESH 52 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 5799999999999998887653 53 68999965
No 401
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=42.19 E-value=16 Score=38.05 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-.++|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 35 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKY 35 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 5699999999999999887653 53 69999986
No 402
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=42.02 E-value=10 Score=38.20 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=28.0
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|++.+|||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 3349999999999999998888764 3 368888874
No 403
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=41.70 E-value=15 Score=39.20 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..|+|+|||.+|+-.|-.|.. .|+ ++.++|+.
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 789999999999999888765 365 46777764
No 404
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=41.57 E-value=14 Score=39.83 Aligned_cols=36 Identities=8% Similarity=-0.179 Sum_probs=27.3
Q ss_pred eccCccccccchhhHHHHHHhCCcccCHHHHHHHHH
Q 007939 485 HVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAE 520 (584)
Q Consensus 485 ~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~ 520 (584)
.||+.-|-+++|.+.=++.++...-++.+.+..+.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 478888888899888888777334478887777754
No 405
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=41.38 E-value=13 Score=43.46 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=27.2
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|+|.||+..|..+.. .|. +++.++|++
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQ 220 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCC
Confidence 689999999999999988765 353 258899986
No 406
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=41.35 E-value=14 Score=40.92 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=26.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|+|.||+..|..+.. .| .++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 689999999999999888754 24 3699999864
No 407
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=41.20 E-value=14 Score=40.17 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=27.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
..|+|+|+|.+|+++|-.+.. .|+ ++.++|+..+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 579999999999999988765 365 5899997643
No 408
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=41.17 E-value=36 Score=34.38 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=21.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 699999998777655544432 243 36888875
No 409
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=41.11 E-value=19 Score=36.36 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.++||+|||.||+..|..+.+ .|.+ -++.++|+.
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 689999999999999887754 3542 358888764
No 410
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=41.07 E-value=14 Score=38.52 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
..|+|+|||.||+..|-.+.+ .|+ ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999877654 353 6999998653
No 411
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=40.97 E-value=33 Score=34.01 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 301 aV~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.+.++..+.++.....--.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 34556666677444333344 69999998 7777666554433 343 6888775
No 412
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=40.89 E-value=23 Score=33.85 Aligned_cols=86 Identities=22% Similarity=0.304 Sum_probs=52.3
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
||+|.|| |-.|..+++.|. . | .+++.+|+..- +.+- ++ .+..++.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~--------------~~~~--D~---~d~~~~~~~ 49 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSK--------------EFCG--DF---SNPKGVAET 49 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCS--------------SSCC--CT---TCHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccc--------------cccc--cC---CCHHHHHHH
Confidence 7899998 777766666654 2 3 36888887531 1110 00 122457888
Q ss_pred hcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 404 VRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~----------------Fteevv~~M~~~~~erPIIFaLS 444 (584)
++..++|++|=+.+.... -+..+++++.+ ..- .+||.=|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS 104 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYST 104 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEE
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEec
Confidence 888889999988765431 14567777643 322 4887544
No 413
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=40.87 E-value=13 Score=39.48 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=28.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHH-------HcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~-------~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|||.||+-.|-.|...... ..|+ ++.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999888774310 0354 588999863
No 414
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=40.86 E-value=25 Score=36.33 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.7
Q ss_pred ceEEEeCcchhhHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (584)
--|+|+|||-+|+..|..|.+
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k 31 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQ 31 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHh
Confidence 469999999999999988865
No 415
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=40.83 E-value=15 Score=38.62 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=25.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~ 36 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEAR 36 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5799999999999999888763 43 46666664
No 416
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=40.78 E-value=13 Score=40.37 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
--|||+|+|.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 579999999999999987754 465 58899986
No 417
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=40.73 E-value=15 Score=39.59 Aligned_cols=32 Identities=9% Similarity=0.364 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 579999999999999887765 464 47788875
No 418
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=40.54 E-value=33 Score=34.55 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=21.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|||..|...+++... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999998777655544433 243 36888875
No 419
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=40.39 E-value=34 Score=34.60 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=21.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 699999998777655544433 243 36888875
No 420
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=40.39 E-value=12 Score=39.66 Aligned_cols=154 Identities=11% Similarity=0.054 Sum_probs=90.7
Q ss_pred cccchHHHHHHHhhcccC--CC-----ccccccCChhhHHHHHhcCCCCCceEEEEecCceeeccCCCCCCcccccchhh
Q 007939 129 YTPTVGLVCQNYSGLFRR--PR-----GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKL 201 (584)
Q Consensus 129 YTPtVg~ac~~~s~~~r~--pr-----Glyis~~D~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~Gm~I~iGKl 201 (584)
++.+...++..+-..+.. +. |- +.-.+...+..+|+.. +++++++.+|+.+=-|-+.|-.-.-|.++..
T Consensus 163 ~~~G~~~a~~al~~~~~~~~~~~VNilG~-~~~~~~~eik~lL~~~---Gi~v~~~~~~~~~~ei~~~~~A~~niv~~~~ 238 (437)
T 3aek_A 163 FTQGEDTCLAAMVPTLDTTEAAELIVVGA-LPDVVEDQCLSLLTQL---GVGPVRMLPARRSDIEPAVGPNTRFILAQPF 238 (437)
T ss_dssp TTHHHHHHHHHHGGGSCBCCCCCEEEESC-CCHHHHHHHHHHHHHT---TCCCEEEESCSSGGGCCCBCTTCEEEESSTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCcEEEEeC-CChhHHHHHHHHHHHc---CCceEEEcCCCCHHHHHhhhcCcEEEEECcc
Confidence 456666667666554432 11 32 2222225778888864 6788888888866666666666666666554
Q ss_pred hhhhhh----cCCCCCCc-eeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeEeccCCCC
Q 007939 202 DVYVAA----AGINPQRI-LPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMK 276 (584)
Q Consensus 202 ~LY~a~----gGI~P~~~-LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIqfEDf~~~ 276 (584)
..|++- -|+..-.. +|+ |+ +-.++|+.++.+.+.. ..+
T Consensus 239 ~~~~A~~Le~~GiP~i~~~~P~------------------G~-----------~~T~~~l~~la~~~g~--------~~~ 281 (437)
T 3aek_A 239 LGETTGALERRGAKRIAAPFPF------------------GE-----------EGTTLWLKAVADAYGV--------SAE 281 (437)
T ss_dssp CHHHHHHHHHTTCEECCCCCSC------------------HH-----------HHHHHHHHHHHHHTTC--------CHH
T ss_pred HHHHHHHHHHcCCCeEecCCCc------------------CH-----------HHHHHHHHHHHHHHCC--------Chh
Confidence 433322 24441111 121 21 2378999999988742 112
Q ss_pred hHHHHHHHHhhccCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHH
Q 007939 277 WAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 277 nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~ 344 (584)
.+-+++++.|.+ +..++......|.. .|++++|-+.-..++++.|..
T Consensus 282 ~~e~~i~~e~~~------------------~~~~l~~~~~~l~G---krv~i~g~~~~~~~l~~~L~~ 328 (437)
T 3aek_A 282 KFEAVTAAPRAR------------------AKKAIAAHLETLTG---KSLFMFPDSQLEIPLARFLAR 328 (437)
T ss_dssp HHHHHHHHHHHH------------------HHHHHHTTHHHHTT---CEEEECSSSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHH------------------HHHHHHHHHHHhCC---CEEEEEcCchHHHHHHHHHHH
Confidence 345566666665 23333333344555 899999999999999888833
No 421
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=40.33 E-value=40 Score=33.90 Aligned_cols=46 Identities=15% Similarity=0.286 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
+..+.+++..+.+. . ++|+|+|||..|...+.+... .|. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~qlak~-----~Ga-------~Vi~~~~ 211 (360)
T 1piw_A 166 LTVYSPLVRNGCGP-G---KKVGIVGLGGIGSMGTLISKA-----MGA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHHTTCST-T---CEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcC
Confidence 34456666644433 3 699999998777665554433 242 4888875
No 422
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=40.13 E-value=14 Score=35.24 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=21.5
Q ss_pred CceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++++||.||++ .|+ ...++..+. ++|. +++++|++
T Consensus 9 ~k~vlVTGas~~~gI--G~~ia~~l~-~~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 9 GKRILVTGVASKLSI--AYGIAQAMH-REGA-------ELAFTYQN 44 (265)
T ss_dssp TCEEEECCCCSTTSH--HHHHHHHHH-HTTC-------EEEEEESS
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHH-HCCC-------EEEEEcCc
Confidence 38999999852 333 333444444 3453 58888875
No 423
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=39.99 E-value=41 Score=33.86 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=28.7
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..+.+++..+.+... ++++|+|+|..|...+.+... .|. +++.+|+
T Consensus 167 ta~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak~-----~Ga-------~Vi~~~~ 212 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAKA-----MGH-------HVTVISS 212 (357)
T ss_dssp HHHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 345666665554244 699999998776655544433 242 5887876
No 424
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=39.78 E-value=14 Score=37.94 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=27.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
-||||+|||.||+..|..| . ..| .+|.++|+.--+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L----~-~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAA----L-GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CSEEEECCSHHHHHHHHHH----T-TTC-------SCEEEECSSSSC
T ss_pred CCEEEEcCcHHHHHHHHHH----h-CCC-------CEEEEEECCCCC
Confidence 6999999999999999988 1 223 369999886543
No 425
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=39.68 E-value=18 Score=37.09 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=26.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.+|+..|..|.+. .| .++.++++.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~----~g-------~~v~v~E~~ 40 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ----LD-------KRVLVLERR 40 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH----SC-------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh----CC-------CCEEEEeCC
Confidence 6899999999999999888653 14 368888875
No 426
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=39.68 E-value=21 Score=37.19 Aligned_cols=22 Identities=41% Similarity=0.628 Sum_probs=19.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQA 345 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (584)
.+|+|+|||.+|+..|..+...
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~ 55 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA 55 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC
Confidence 6899999999999999888764
No 427
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=39.66 E-value=36 Score=34.38 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=25.7
Q ss_pred HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007939 400 LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (584)
Q Consensus 400 L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSN 445 (584)
+..+++..|||++||..+... +.-.+++.....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~s-----~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYVT-----GPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSSTH-----HHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcch-----HHHHHHHHHcCCCEEEEecc
Confidence 345688899999999765321 11122233567899875555
No 428
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=39.66 E-value=19 Score=38.22 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEe
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (584)
.+++|+|||.||+..|..+.+. .|+ ++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 6899999999999999888661 243 699999
No 429
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=39.60 E-value=54 Score=33.91 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=83.0
Q ss_pred HHHHCCCeeeEeccCCCChHHHHHHHHhhccCccc--cCcchhHHHHHHHHHHHHHHhC------CCCCCCCCceEEEeC
Q 007939 259 VHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFN--DDIQGTAGVALAGLLGTVRAQG------LSLTDFADQKIVVVG 330 (584)
Q Consensus 259 v~~~~P~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g------~~l~dl~~~riv~~G 330 (584)
|-.+|.++ |-+-.++ +.+.+.|.+|- .+|+.| || .---.=+||=++.-.+..| ++++. .||.++|
T Consensus 96 vls~~~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~g---l~va~vG 168 (328)
T 3grf_A 96 VFSRMVDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKG---IKFAYCG 168 (328)
T ss_dssp HHTTTCSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGG---CCEEEES
T ss_pred HHHhhCCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCC---cEEEEeC
Confidence 34556554 3334554 34455555653 589998 66 4555667777777666666 25666 9999999
Q ss_pred cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccc--c-CCcCCcccCCCHHHHhccc
Q 007939 331 AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD--P-GDFMGLREGASLLEVVRKV 407 (584)
Q Consensus 331 AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~--~-~~~~~~~~~~~L~evV~~v 407 (584)
-+. + .+|+-++.++. +-|+ +|.++-.+|+..+-.+.+.+.-+.+|+. . .. .....++.|+|+.
T Consensus 169 D~~-~-~va~Sl~~~~~-~~G~-------~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~---v~~~~d~~eav~~- 234 (328)
T 3grf_A 169 DSM-N-NVTYDLMRGCA-LLGM-------ECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGS---IKIFHDCKKGCEG- 234 (328)
T ss_dssp CCS-S-HHHHHHHHHHH-HHTC-------EEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCE---EEEESSHHHHHTT-
T ss_pred CCC-c-chHHHHHHHHH-HcCC-------EEEEECChHhhhCCCHHHHHHHHHHHhhccCCCe---EEEEcCHHHHhcC-
Confidence 985 3 58888888877 5676 5999999888632111121122233322 1 11 1134689999998
Q ss_pred CCcEEEe
Q 007939 408 KPHVLLG 414 (584)
Q Consensus 408 kptvLIG 414 (584)
.||+.-
T Consensus 235 -aDvvyt 240 (328)
T 3grf_A 235 -VDVVYT 240 (328)
T ss_dssp -CSEEEE
T ss_pred -CCEEEe
Confidence 999973
No 430
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=39.57 E-value=2e+02 Score=29.89 Aligned_cols=128 Identities=13% Similarity=0.189 Sum_probs=76.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
+|+++++-|..|...|+...-... ..+. +-+=.+|+. ..+++ +.+. ....+ +.+...|+.|+
T Consensus 8 ~~~vi~~~g~~~~~~aKta~gl~r-~~~~------~iVgvid~~---~~G~d-~ge~-~g~~~------gipi~~~l~~a 69 (349)
T 2obn_A 8 QRVAILLHEGTTGTIGKTGLALLR-YSEA------PIVAVIDRN---CAGQS-LREI-TGIYR------YVPIVKSVEAA 69 (349)
T ss_dssp CCEEEECTTTSSSSSCHHHHHHHH-HCCS------CEEEEECGG---GTTSC-HHHH-HCCCS------CCCEESSHHHH
T ss_pred CcEEEEeCCCCCcHHHHHhHHhhh-cCCC------cEEEEEeCC---CCCCc-HHHh-cCCcC------CCCccCCHHHH
Confidence 799999999999888887755433 2232 335567876 33332 2111 01111 12345889999
Q ss_pred hcccCCcE-EEeecCCCCCCC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHH-HHhcccCCcEEEEeCCCCCccc
Q 007939 404 VRKVKPHV-LLGLSGVGGVFN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAA-DAFKHAGENIVFASGSPFENVD 477 (584)
Q Consensus 404 V~~vkptv-LIG~S~~~g~Ft----eevv~~M~~~~~erPIIFaLSNPt~~aE~tpe-da~~wT~Grai~AsGSPf~pv~ 477 (584)
+. .+|++ +||+...+|.+. ++++++|.+ -.-||=.|-+|-+ -.|| .+.... |.-|+-+|-|.+..+
T Consensus 70 l~-~~~d~lvig~a~~gG~l~~~~~~~i~~Al~~---G~~Vvsglh~~l~---~~pel~~~A~~-g~~i~dvr~pp~~l~ 141 (349)
T 2obn_A 70 LE-YKPQVLVIGIAPKGGGIPDDYWIELKTALQA---GMSLVNGLHTPLA---NIPDLNALLQP-GQLIWDVRKEPANLD 141 (349)
T ss_dssp GG-GCCSEEEECCCCCCC-SCGGGHHHHHHHHHT---TCEEEECSSSCCT---TCHHHHHHCCT-TCCEEETTCCCSSCC
T ss_pred Hh-CCCCEEEEEecCCCCCCCHHHHHHHHHHHHc---CCcEEeCccchhh---CCHHHHHHHHc-CCEEEEeccCccccc
Confidence 95 47876 679887888888 777777743 4446555554432 1222 222333 888888887764443
No 431
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=39.47 E-value=17 Score=34.17 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=55.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ev 403 (584)
.||.|+|+|..|..+|..+.. .|. +++++|++- +....+++.. . . ..++.++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----------~~~~~~~~~g--~---~-~~~~~~~ 80 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----------KRTARLFPSA--A---Q-VTFQEEA 80 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----------HHHHHHSBTT--S---E-EEEHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----------HHHHHHHHcC--C---c-eecHHHH
Confidence 689999999999999888754 343 588888741 1111122111 0 1 1268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007939 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (584)
Q Consensus 404 V~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~ 448 (584)
++. +|++| ++..+. ..+++++ ++. ..+.-+|.-+||+.+
T Consensus 81 ~~~--~DvVi-~av~~~-~~~~v~~-l~~-~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIF-VAVFRE-HYSSLCS-LSD-QLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEE-ECSCGG-GSGGGGG-GHH-HHTTCEEEECCCCCH
T ss_pred HhC--CCEEE-ECCChH-HHHHHHH-HHH-hcCCCEEEEeCCCcc
Confidence 876 89888 333333 3455554 322 125668899999875
No 432
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=39.42 E-value=17 Score=36.88 Aligned_cols=33 Identities=33% Similarity=0.597 Sum_probs=25.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.+|+..|..|.+. |. .++.++++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 6899999999999999887653 41 246677664
No 433
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=39.42 E-value=35 Score=30.62 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=34.7
Q ss_pred hcCCCCCCceeEEeeccCCccccccCcccccccccCCChhhhhHhHHHHHHHHHHHCCCeeeE
Q 007939 207 AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQ 269 (584)
Q Consensus 207 ~gGI~P~~~LPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~lIq 269 (584)
....+|+- |+|..|||. . ..+-++|.+-++++++.+++..|++.|-
T Consensus 70 ~~~~~pd~---Vvi~~G~ND------~--------~~~~~~~~~~l~~ii~~l~~~~p~~~ii 115 (200)
T 4h08_A 70 LKNTKFDV---IHFNNGLHG------F--------DYTEEEYDKSFPKLIKIIRKYAPKAKLI 115 (200)
T ss_dssp HHHSCCSE---EEECCCSSC------T--------TSCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhcCCCCe---EEEEeeeCC------C--------CCCHHHHHHHHHHHHHHHhhhCCCccEE
Confidence 33445543 678999974 1 3467999999999999999999987443
No 434
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.29 E-value=17 Score=36.96 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.++||+|+|.||+..|..+.. .| ++.++|+.-..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 589999999999999888743 23 69999987543
No 435
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=39.24 E-value=21 Score=37.72 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEe
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (584)
.+++|+|||.||+..|..+.+. .|+ ++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 6899999999999999888661 243 699999
No 436
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=39.22 E-value=17 Score=40.15 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.||+..|-.+.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 589999999999999887754 353 699999853
No 437
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=39.05 E-value=26 Score=33.62 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=53.9
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|+.. ....+. ....+..- + ..+..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~-~~~~~~~~--D---~~d~~~~~~ 62 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTDVV-NSGPFEVV--N---ALDFNQIEH 62 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCHHH-HSSCEEEC--C---TTCHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cccccc-CCCceEEe--c---CCCHHHHHH
Confidence 58999998 77777777766553 012 2688888641 111010 01111111 0 112345788
Q ss_pred HhcccCCcEEEeecCCCCC---------------CCHHHHHHhhhcCCCCCeEEe
Q 007939 403 VVRKVKPHVLLGLSGVGGV---------------FNEEVLKAMRESDSVKPAIFA 442 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~---------------Fteevv~~M~~~~~erPIIFa 442 (584)
+++..++|++|=+.+.... -|..+++++.+ ..-+.+||.
T Consensus 63 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 116 (312)
T 2yy7_A 63 LVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWP 116 (312)
T ss_dssp HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECC
T ss_pred HHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEe
Confidence 8887789999988764321 13356677643 333467764
No 438
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=38.99 E-value=61 Score=31.38 Aligned_cols=81 Identities=16% Similarity=0.259 Sum_probs=43.6
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCC---cC-Cccc
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD---FM-GLRE 396 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~---~~-~~~~ 396 (584)
|++.++||.||++ ||...++..+. ++|. +++++|++- +.+......+...... +. +..+
T Consensus 30 l~gk~~lVTGas~---GIG~aia~~la-~~G~-------~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dl~d 92 (276)
T 3r1i_A 30 LSGKRALITGAST---GIGKKVALAYA-EAGA-------QVAVAARHS------DALQVVADEIAGVGGKALPIRCDVTQ 92 (276)
T ss_dssp CTTCEEEEESTTS---HHHHHHHHHHH-HTTC-------EEEEEESSG------GGGHHHHHHHHHTTCCCEEEECCTTC
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCH------HHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 4449999999853 55555666666 4563 688888741 1222222222111000 00 0112
Q ss_pred CCCHHHHhccc-----CCcEEEeecCC
Q 007939 397 GASLLEVVRKV-----KPHVLLGLSGV 418 (584)
Q Consensus 397 ~~~L~evV~~v-----kptvLIG~S~~ 418 (584)
..++.++++.+ ++|+||=..+.
T Consensus 93 ~~~v~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 93 PDQVRGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 34566666655 79999976654
No 439
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=38.92 E-value=17 Score=35.81 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=56.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC--cccccCCCCCChhhhccccccCCcCCcccCCCHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~--GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~ 401 (584)
.||.|+|+|+-|..+|..|... | .+++++|+. ++-.....+ . .+. .-..+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~g------~--~~~------~~~~~~~ 56 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHAKTITYYTVPH------A--PAQ------DIVVKGY 56 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSCEEEEEESSTT------S--CCE------EEEEEEG
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEeccCcEEEEecCC------e--ecc------ceecCch
Confidence 5899999999999998888664 4 257777764 111000000 0 000 0001222
Q ss_pred HHh-cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCC
Q 007939 402 EVV-RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAEC 452 (584)
Q Consensus 402 evV-~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFaLSNPt~~aE~ 452 (584)
+++ + .+|++| ++.. ...++++++.++....+..+|..+.|--...|.
T Consensus 57 ~~~~~--~~D~vi-lavk-~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~ 104 (294)
T 3g17_A 57 EDVTN--TFDVII-IAVK-THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH 104 (294)
T ss_dssp GGCCS--CEEEEE-ECSC-GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG
T ss_pred HhcCC--CCCEEE-EeCC-ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh
Confidence 332 2 367766 5543 335688888885434456688889998765443
No 440
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=38.85 E-value=16 Score=38.12 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-.|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999877754 354 68999984
No 441
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=38.81 E-value=19 Score=36.89 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=25.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.+|+|+|||.||+..|..|... |. ++.++++.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 6899999999999999887653 43 46677665
No 442
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=38.76 E-value=18 Score=37.55 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=18.8
Q ss_pred ceEEEeCcchhhHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (584)
.+|+|+|||.||+..|..|.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~ 60 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV 60 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHH
Confidence 589999999999999888765
No 443
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=38.68 E-value=34 Score=31.25 Aligned_cols=95 Identities=18% Similarity=0.237 Sum_probs=50.0
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||+|.|| |-.|-.+++.|.+ .| .++++++++.- ..+.+.. ...+..- + ..+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~--D---l~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIENE-HLKVKKA--D---VSSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCCT-TEEEECC--C---TTCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhccC-ceEEEEe--c---CCCHHHHHH
Confidence 58999997 5555555544433 44 36888888521 1112211 1112111 0 112356888
Q ss_pred HhcccCCcEEEeecCCCC----------CCCHHHHHHhhhcCCCCCeEEe
Q 007939 403 VVRKVKPHVLLGLSGVGG----------VFNEEVLKAMRESDSVKPAIFA 442 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g----------~Fteevv~~M~~~~~erPIIFa 442 (584)
+++. +|++|=+.+... ..+..++++|.+ ..-+-+||.
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 110 (227)
T 3dhn_A 64 VCKG--ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKK-AGVNRFLMV 110 (227)
T ss_dssp HHTT--CSEEEECCCC------CCSHHHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred HhcC--CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEe
Confidence 8886 899997765321 124556777754 333456663
No 444
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=38.62 E-value=15 Score=39.23 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.+||..+..+ |. +++++|+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999987653 53 57888863
No 445
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=38.53 E-value=15 Score=38.20 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=18.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQA 345 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (584)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999777553
No 446
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=38.42 E-value=9 Score=39.80 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=25.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999988877654 454 477888764
No 447
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=38.20 E-value=43 Score=33.42 Aligned_cols=31 Identities=16% Similarity=0.392 Sum_probs=19.3
Q ss_pred HHHHHHHh----CCCCCCCCCceEEEeCcchhhHHHHHH
Q 007939 307 LLGTVRAQ----GLSLTDFADQKIVVVGAGSAGLGVLKM 341 (584)
Q Consensus 307 ll~Alr~~----g~~l~dl~~~riv~~GAGsAg~GiA~l 341 (584)
.+.+++.. +.- .. ++|+|+|||..|...+++
T Consensus 155 a~~al~~~~~~~~~~-~g---~~VlV~GaG~vG~~aiql 189 (344)
T 2h6e_A 155 SMGAIRQALPFISKF-AE---PVVIVNGIGGLAVYTIQI 189 (344)
T ss_dssp HHHHHHHHHHHHTTC-SS---CEEEEECCSHHHHHHHHH
T ss_pred HHHHHHhhhhcccCC-CC---CEEEEECCCHHHHHHHHH
Confidence 35555554 233 56 799999998666544443
No 448
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=38.14 E-value=14 Score=38.05 Aligned_cols=21 Identities=33% Similarity=0.515 Sum_probs=18.5
Q ss_pred ceEEEeCcchhhHHHHHHHHH
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQ 344 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (584)
.+|+|+|||.+|+..|..|..
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~ 37 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRS 37 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHH
Confidence 589999999999999888765
No 449
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=38.06 E-value=15 Score=40.83 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=26.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..|+|+|||.||+.+|-.|.+ .|. ++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 579999999999999877754 354 699999863
No 450
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=37.78 E-value=53 Score=30.98 Aligned_cols=46 Identities=24% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~-----------------Fteevv~~M~~~~~erPIIFaLS 444 (584)
.++.++++..++|++|=+.+..+. -|..+++++.+ ..-+.+||.=|
T Consensus 51 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~v~~SS 113 (319)
T 4b8w_A 51 AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE-VGARKVVSCLS 113 (319)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEcc
Confidence 458889988899999988775431 12346777754 44456888443
No 451
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=37.67 E-value=32 Score=33.48 Aligned_cols=102 Identities=20% Similarity=0.227 Sum_probs=54.5
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhcccc---ccCC-cC-CcccC
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGD-FM-GLREG 397 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~---~~~~-~~-~~~~~ 397 (584)
.+|+|.|| |-.|..+++.|.+ .|. +++++|+.. +........+.. ..-. .. ...+.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 67 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLA-----HGY-------DVVIADNLV------NSKREAIARIEKITGKTPAFHETDVSDE 67 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECCCS------SSCTHHHHHHHHHHSCCCEEECCCTTCH
T ss_pred cEEEEecCCcHHHHHHHHHHHH-----CCC-------cEEEEecCC------cchHHHHHHHHhhcCCCceEEEeecCCH
Confidence 68999996 5455555554443 453 688887641 112221111100 0000 00 01233
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007939 398 ASLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 398 ~~L~evV~~vkptvLIG~S~~~g~----------------Fteevv~~M~~~~~erPIIFaLS 444 (584)
.++.++++..++|++|=+.+.... -+..+++.|.+ ..-+.|||.=|
T Consensus 68 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~SS 129 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEec
Confidence 567888887789999977764321 13457788854 44467888544
No 452
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=37.67 E-value=24 Score=35.52 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=21.7
Q ss_pred ceEEEeCcchhhHHH-HHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGV-LKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~Gi-A~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++|+|+|||..|... +.+... ..|. ++++.+|+.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k----~~Ga------~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVD----DKGY------ENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHC----TTCC------CEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHH----HcCC------cEEEEEeCC
Confidence 699999998766555 433302 2353 458888873
No 453
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=37.50 E-value=32 Score=34.19 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
+.++..+.++.....--.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~G~-------~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM-----MGC-------YVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3444555666332222234 69999997 7777666655443 342 5888876
No 454
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=37.49 E-value=1.1e+02 Score=29.32 Aligned_cols=75 Identities=24% Similarity=0.312 Sum_probs=41.3
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L 400 (584)
++++++||.||++ ||...|+..+. ++|. +++++|++.- .+......+.-|- .+..++
T Consensus 12 ~~~k~vlVTGas~---GIG~aia~~l~-~~G~-------~V~~~~r~~~------~~~~~~~~~~~Dv------~~~~~v 68 (269)
T 3vtz_A 12 FTDKVAIVTGGSS---GIGLAVVDALV-RYGA-------KVVSVSLDEK------SDVNVSDHFKIDV------TNEEEV 68 (269)
T ss_dssp TTTCEEEESSTTS---HHHHHHHHHHH-HTTC-------EEEEEESCC--------CTTSSEEEECCT------TCHHHH
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCch------hccCceeEEEecC------CCHHHH
Confidence 3449999999854 55555666666 4563 5888886421 1111111121121 122346
Q ss_pred HHHhccc-----CCcEEEeecCC
Q 007939 401 LEVVRKV-----KPHVLLGLSGV 418 (584)
Q Consensus 401 ~evV~~v-----kptvLIG~S~~ 418 (584)
.++++.+ ++|+||=..+.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 69 KEAVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 6666655 79999976654
No 455
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=37.45 E-value=34 Score=37.31 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=27.3
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHc--CCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~--Gls~eeA~~~i~lvDs~ 367 (584)
-.|||+|||.||+..|-.|.+... +. |+ ++.++++.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~ 73 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKA 73 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCC
Confidence 469999999999999988877533 23 54 47777765
No 456
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=37.31 E-value=15 Score=37.21 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=51.8
Q ss_pred CCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCC
Q 007939 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (584)
.++...||.|+|+|..|...+..+... ..|. +-+.++|++ .+.. +.+++.-.. ......
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~------~~~~----~~~a~~~g~--~~~~~~ 77 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV------AGRA----QAALDKYAI--EAKDYN 77 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS------TTHH----HHHHHHHTC--CCEEES
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC------HHHH----HHHHHHhCC--CCeeeC
Confidence 334457999999998876655544321 1121 123466653 1111 223322110 001357
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007939 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIF 441 (584)
++.|+++.-++|+++ +++ |..+..++++...+ ..++|+.
T Consensus 78 ~~~~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~ 116 (357)
T 3ec7_A 78 DYHDLINDKDVEVVI-ITA-SNEAHADVAVAALN--ANKYVFC 116 (357)
T ss_dssp SHHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred CHHHHhcCCCCCEEE-EcC-CcHHHHHHHHHHHH--CCCCEEe
Confidence 899999987899988 555 44555666655433 2355554
No 457
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=37.19 E-value=22 Score=33.85 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.3
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
||.|+|+|..|..+|..+... |. .+++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999887653 42 368888874
No 458
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=37.16 E-value=20 Score=34.13 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=24.3
Q ss_pred CCCceEEEeCc-ch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GA-Gs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|+.+++||.|| |+ .|..+|+.+++ +|. +++++|++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 44599999999 64 66666666654 453 58888874
No 459
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=37.13 E-value=11 Score=37.64 Aligned_cols=31 Identities=23% Similarity=0.550 Sum_probs=24.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
+||-|+|-|..|.++|..|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5999999999999999998764 53 5777786
No 460
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=37.11 E-value=40 Score=33.69 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=26.9
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..+.+++..+.+.. ++|+|+|||..|.-.+.+.. ..|. +++.+|+
T Consensus 164 ta~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~-----~~Ga-------~Vi~~~~ 208 (348)
T 3two_A 164 TTYSPLKFSKVTKG----TKVGVAGFGGLGSMAVKYAV-----AMGA-------EVSVFAR 208 (348)
T ss_dssp HHHHHHHHTTCCTT----CEEEEESCSHHHHHHHHHHH-----HTTC-------EEEEECS
T ss_pred HHHHHHHhcCCCCC----CEEEEECCcHHHHHHHHHHH-----HCCC-------eEEEEeC
Confidence 34566666544433 59999999866655444332 2343 5777765
No 461
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=37.10 E-value=42 Score=33.07 Aligned_cols=50 Identities=18% Similarity=0.088 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeC-cchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 302 VALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
+.++..+.+++....--.. ++++|.| +|..|..+++++.. .|. +++.+|+
T Consensus 123 ~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~V~~~~~ 173 (327)
T 1qor_A 123 LKGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKA-----LGA-------KLIGTVG 173 (327)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred hHHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 3444555666533222234 6999999 57777666665543 242 5888876
No 462
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=37.08 E-value=41 Score=33.88 Aligned_cols=45 Identities=18% Similarity=0.244 Sum_probs=26.6
Q ss_pred HHHHHHHH--hCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHc-CCChhhhcCcEEEEec
Q 007939 306 GLLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA-GNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~--~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~-Gls~eeA~~~i~lvDs 366 (584)
..+.+++. .+.+. . ++|+|+|||..|...+.+.. .. |. +++.+|+
T Consensus 172 ta~~al~~~~~~~~~-g---~~VlV~GaG~vG~~avqlak-----~~~Ga-------~Vi~~~~ 219 (359)
T 1h2b_A 172 TAYRAVKKAARTLYP-G---AYVAIVGVGGLGHIAVQLLK-----VMTPA-------TVIALDV 219 (359)
T ss_dssp HHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHH-----HHCCC-------EEEEEES
T ss_pred HHHHHHHhhccCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCCC-------eEEEEeC
Confidence 34556665 44433 3 69999999865554443332 23 42 5888875
No 463
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=37.06 E-value=7.9 Score=39.84 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=69.0
Q ss_pred ceEEEeC-cchhhHHHHHHHHHHHHHHcCCC-hhhhcCcEEEEecCc---ccccCCCCCChhhhccccccCCcCCcccCC
Q 007939 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNN-DAFARNKFFLLDKDG---LITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (584)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls-~eeA~~~i~lvDs~G---Li~~~r~~l~~~k~~fA~~~~~~~~~~~~~ 398 (584)
.||+|.| ||..|.-+|.+|+. .|+- +++- -.+.|+|... .+.-..-+|.+.-.+|.++. ....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~-~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~------~~~~ 71 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQP-IILVLLDITPMMGVLDGVLMELQDCALPLLKDV------IATD 71 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE------EEES
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCC-CEEEEEeCCCccccchhhHhhhHhhhhcccCCE------EEcC
Confidence 5899999 69999888877754 3431 1111 1289999852 11100012332222333221 1235
Q ss_pred CHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007939 399 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 461 (584)
Q Consensus 399 ~L~evV~~vkptvLIG~S~~~---g~-----------Fteevv~~M~~~~~erPI-IFaLSNPt~~aE~tpeda~~wT 461 (584)
++.++++. .|++|=+.+.+ |- ..+++++.+.+ ++.+-+ |+-.|||. .....-+++.+
T Consensus 72 ~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~-~~~~~~~vivvsNPv---d~~t~~~~~~~ 143 (333)
T 5mdh_A 72 KEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDK-YAKKSVKVIVVGNPA---NTNCLTASKSA 143 (333)
T ss_dssp CHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred CcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEcCCch---HHHHHHHHHHc
Confidence 68888988 89887444433 21 23567777754 666664 89999996 35555666554
No 464
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=37.02 E-value=19 Score=36.21 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=24.5
Q ss_pred ceEEEeCcchhhH-HHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~-GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+||.|+|.|.+|+ ++|+++.+. |. ++...|++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-----G~-------~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-----GF-------EVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 6899999999999 488877653 43 57777764
No 465
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=36.70 E-value=22 Score=37.28 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.0
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-+|+|+|||.+|+..|..+.. .|. ++.++|+.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~-----~g~-------~v~v~E~~ 61 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLAS-----SGQ-------RVLIVDRR 61 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------ceEEEecc
Confidence 689999999999999877754 343 58888885
No 466
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=36.70 E-value=49 Score=32.74 Aligned_cols=39 Identities=15% Similarity=0.217 Sum_probs=25.4
Q ss_pred CCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 318 l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..+|+.+++||.||++ ||...|+..+. ++|. +++++|+.
T Consensus 41 m~~l~gk~~lVTGas~---GIG~aia~~la-~~G~-------~Vv~~~~~ 79 (317)
T 3oec_A 41 MNRLQGKVAFITGAAR---GQGRTHAVRLA-QDGA-------DIVAIDLC 79 (317)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred hhccCCCEEEEeCCCc---HHHHHHHHHHH-HCCC-------eEEEEecc
Confidence 3445559999999853 55556666666 4564 68888864
No 467
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=36.67 E-value=19 Score=36.30 Aligned_cols=30 Identities=30% Similarity=0.469 Sum_probs=25.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|.|+|+|..|-|||..+. + |. +++++|+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~ 42 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDV 42 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEEC
Confidence 68999999999999999988 6 33 4777775
No 468
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=36.66 E-value=57 Score=31.36 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=25.6
Q ss_pred CCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
++++ +++||.||++ ||...|+..+. ++|. +++++|++
T Consensus 8 ~l~~---k~~lVTGas~---gIG~aia~~la-~~G~-------~V~~~~~~ 44 (286)
T 3uve_A 8 RVEG---KVAFVTGAAR---GQGRSHAVRLA-QEGA-------DIIAVDIC 44 (286)
T ss_dssp TTTT---CEEEEESTTS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred ccCC---CEEEEeCCCc---hHHHHHHHHHH-HCCC-------eEEEEecc
Confidence 4555 9999999854 55555666666 4563 68899876
No 469
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=36.62 E-value=21 Score=37.95 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.7
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHH
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQA 345 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~ 345 (584)
|+++++||+|+|..|..-+++|..+
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC
Confidence 3349999999999999999998875
No 470
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=36.51 E-value=35 Score=34.46 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=21.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999998766555443332 353 36888875
No 471
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=36.19 E-value=37 Score=33.57 Aligned_cols=53 Identities=19% Similarity=0.050 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 299 TAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 299 TaaV~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
+-...++..+.++......-.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 125 ~l~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~ 178 (333)
T 1v3u_A 125 TIGMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL-----KGC-------KVVGAAG 178 (333)
T ss_dssp TTSHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HhCChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3334455556666433333344 79999998 7666666655443 342 5888876
No 472
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=36.14 E-value=24 Score=33.94 Aligned_cols=37 Identities=11% Similarity=0.249 Sum_probs=22.9
Q ss_pred CCCceEEEeCcch-hhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|+++++||-||++ -||| .-|+..+. ++|. +++++|++
T Consensus 4 l~gK~alVTGaa~~~GIG--~aiA~~la-~~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIA--FGVAKVLD-QLGA-------KLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHH--HHHHHHHH-HTTC-------EEEEEESS
T ss_pred CCCCEEEEECCCCCchHH--HHHHHHHH-HCCC-------EEEEEECC
Confidence 4449999999853 3333 23344444 4563 68989875
No 473
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=36.12 E-value=20 Score=38.74 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=25.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.+++|+|||.||+..|..+... |+ ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 7899999999999999877653 53 5888986
No 474
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=36.09 E-value=14 Score=38.76 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=25.8
Q ss_pred CCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
..+||+|+|.|.+|++.|+.+.+ .|. ++...|++-
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 34899999999999999866543 453 466777753
No 475
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=36.04 E-value=36 Score=31.10 Aligned_cols=93 Identities=17% Similarity=0.256 Sum_probs=47.9
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCccc-CCCHHH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE-GASLLE 402 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~-~~~L~e 402 (584)
||+|.|| |-.|..++ ..+. +.| -+++++++..- ....+ .+..+.+- + ..+ ..++.+
T Consensus 2 ~ilItGatG~iG~~l~----~~L~-~~g-------~~V~~~~R~~~---~~~~~--~~~~~~~~--D---~~d~~~~~~~ 59 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLL----KSLS-TTD-------YQIYAGARKVE---QVPQY--NNVKAVHF--D---VDWTPEEMAK 59 (219)
T ss_dssp EEEEESTTSHHHHHHH----HHHT-TSS-------CEEEEEESSGG---GSCCC--TTEEEEEC--C---TTSCHHHHHT
T ss_pred eEEEECCCCHHHHHHH----HHHH-HCC-------CEEEEEECCcc---chhhc--CCceEEEe--c---ccCCHHHHHH
Confidence 7899995 44444444 4444 345 36888887531 11111 11112111 0 112 345777
Q ss_pred HhcccCCcEEEeecCCCCC--------CCHHHHHHhhhcCCCCCeEEe
Q 007939 403 VVRKVKPHVLLGLSGVGGV--------FNEEVLKAMRESDSVKPAIFA 442 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~--------Fteevv~~M~~~~~erPIIFa 442 (584)
+++. +|++|=+.+.... -+..++++|.+ ..-+.|||.
T Consensus 60 ~~~~--~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~ 104 (219)
T 3dqp_A 60 QLHG--MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEK-AEVKRFILL 104 (219)
T ss_dssp TTTT--CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHcC--CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHH-hCCCEEEEE
Confidence 7775 8999977764321 14567777743 333345553
No 476
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=36.00 E-value=9.9 Score=40.35 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=25.6
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (584)
.+|||+|+|.||+..|..+... .++.++|+.-
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5799999999999998877542 3688888754
No 477
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=35.88 E-value=37 Score=34.28 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=21.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999998766555444332 353 36888875
No 478
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=35.85 E-value=23 Score=36.34 Aligned_cols=37 Identities=22% Similarity=0.391 Sum_probs=27.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|+|+|+|.||+..|..+.... .|. ++.++|+...+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~---~g~-------~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR---PDL-------KVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC---TTS-------CEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcC---CCC-------eEEEEecCccc
Confidence 68999999999999998776530 143 68899986443
No 479
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=35.81 E-value=39 Score=35.12 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=24.0
Q ss_pred eEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
||.|+|+|..|..+|..+.. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999877653 3 368888874
No 480
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=35.61 E-value=40 Score=33.58 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..+.+++..+.+. . ++++|.|||..|..++.++.. .|. +++.+|+
T Consensus 152 ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 196 (339)
T 1rjw_A 152 TTYKALKVTGAKP-G---EWVAIYGIGGLGHVAVQYAKA-----MGL-------NVVAVDI 196 (339)
T ss_dssp HHHHHHHHHTCCT-T---CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 3456666665443 3 599999998766555544432 352 5887775
No 481
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=35.46 E-value=17 Score=38.43 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=25.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
..++|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 479999999999988877654 354 68999975
No 482
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=35.38 E-value=19 Score=38.87 Aligned_cols=32 Identities=31% Similarity=0.674 Sum_probs=26.5
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|.|||..+..+ |. +++++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988763 54 58888864
No 483
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=35.19 E-value=22 Score=42.05 Aligned_cols=39 Identities=26% Similarity=0.440 Sum_probs=31.1
Q ss_pred CceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
+.||+++|||.-|.-+++.|+.+.+ |.. -..+|.++|.+
T Consensus 425 ~~~VlvVGaGGlGsevlk~La~~Gv---~~g---~~G~i~lvD~D 463 (1015)
T 3cmm_A 425 NSKVFLVGSGAIGCEMLKNWALLGL---GSG---SDGYIVVTDND 463 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTT---TCS---TTCEEEEECCC
T ss_pred cCeEEEEecCHHHHHHHHHHHHcCc---CcC---CCCeEEEEeCC
Confidence 4899999999999999999988755 221 12589999987
No 484
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=35.05 E-value=61 Score=31.94 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=20.9
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.+++|.|| |..|...+.+... .|. +++.+|+
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~~-----~Ga-------~vi~~~~ 183 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLNK-----RGY-------DVVASTG 183 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHHH-----HTC-------CEEEEES
T ss_pred ceEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 38999998 8887666555433 242 4777776
No 485
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=34.99 E-value=20 Score=37.42 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=27.7
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
.+|+|+|||-+|+..|-.|.. .| +++.++|++.-+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~-----~G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSV-----DG-------KKVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 689999999999988887765 35 368899987543
No 486
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=34.97 E-value=37 Score=33.75 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 306 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..+.+++..+.+.. ++++|.|||..|.-.+++.. ..|. +++.+|+
T Consensus 154 ta~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~-----~~Ga-------~Vi~~~~ 198 (340)
T 3s2e_A 154 TVYKGLKVTDTRPG----QWVVISGIGGLGHVAVQYAR-----AMGL-------RVAAVDI 198 (340)
T ss_dssp HHHHHHHTTTCCTT----SEEEEECCSTTHHHHHHHHH-----HTTC-------EEEEEES
T ss_pred HHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHH-----HCCC-------eEEEEeC
Confidence 34556665544443 59999999876655443332 2353 5887776
No 487
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=34.60 E-value=21 Score=33.80 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=50.9
Q ss_pred eEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChh---hhccccccCCcCCcccCCCH
Q 007939 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA---AAPFAKDPGDFMGLREGASL 400 (584)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~---k~~fA~~~~~~~~~~~~~~L 400 (584)
||+|.|| |-.|..+++.|.+. ..| .+++.++++. +..... ...+..- + ..+..++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~------~~~~~~~~~~~~~~~~--D---~~d~~~~ 59 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP------AKAQALAAQGITVRQA--D---YGDEAAL 59 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT------TTCHHHHHTTCEEEEC--C---TTCHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh------HhhhhhhcCCCeEEEc--C---CCCHHHH
Confidence 5889997 66666666555431 003 2588888641 112111 1111111 1 1123457
Q ss_pred HHHhcccCCcEEEeecCCCC----CCCHHHHHHhhhcCCCCCeEEecC
Q 007939 401 LEVVRKVKPHVLLGLSGVGG----VFNEEVLKAMRESDSVKPAIFAMS 444 (584)
Q Consensus 401 ~evV~~vkptvLIG~S~~~g----~Fteevv~~M~~~~~erPIIFaLS 444 (584)
.++++. +|++|=+++... ..+..++++|.+ ..-+.|||.=|
T Consensus 60 ~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~-~~~~~~v~~Ss 104 (286)
T 2zcu_A 60 TSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKA-AGVKFIAYTSL 104 (286)
T ss_dssp HHHTTT--CSEEEECC--------CHHHHHHHHHHH-HTCCEEEEEEE
T ss_pred HHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHH-cCCCEEEEECC
Confidence 888876 799998776321 246788888854 33356777533
No 488
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=34.59 E-value=1.1e+02 Score=32.47 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
.||.|+|+|..|..+|..+.... .| .+++++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g---~G-------~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC---PE-------IRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC---TT-------SEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC---CC-------CEEEEEECC
Confidence 48999999999999999887641 02 258888874
No 489
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=34.53 E-value=36 Score=34.06 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=53.4
Q ss_pred ceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcccccCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007939 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (584)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi~~~r~~l~~~k~~fA~~~~~~~~~~~~~~L~e 402 (584)
.||+++|+ |.-|--+++.+.+ .|. +-++-++.+.- + + .. .+.+-..++.|
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~-----~g~------~~v~~VnP~~~---g-~-------~i-------~G~~vy~sl~e 58 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLT-----YGT------KIVAGVTPGKG---G-M-------EV-------LGVPVYDTVKE 58 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-C-------EE-------TTEEEESSHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHH-----cCC------eEEEEECCCCC---C-c-------eE-------CCEEeeCCHHH
Confidence 78999999 8887666554433 354 24667777531 0 0 00 11123467999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEe
Q 007939 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 442 (584)
Q Consensus 403 vV~~vkptvLIG~S~~~g~Fteevv~~M~~~~~erPIIFa 442 (584)
+.+..+||+.| +.+ |..+..++++...+...+.-|||+
T Consensus 59 l~~~~~~Dv~I-i~v-p~~~~~~~~~ea~~~Gi~~vVi~t 96 (288)
T 1oi7_A 59 AVAHHEVDASI-IFV-PAPAAADAALEAAHAGIPLIVLIT 96 (288)
T ss_dssp HHHHSCCSEEE-ECC-CHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HhhcCCCCEEE-Eec-CHHHHHHHHHHHHHCCCCEEEEEC
Confidence 98855699888 443 566888888888652322234554
No 490
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=34.53 E-value=40 Score=34.02 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=20.9
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
++++|+|+|..|...+.+... .|. ++++.+|+
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 225 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHS-----AGA------KRIIAVDL 225 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 699999998666555443332 353 36888875
No 491
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=34.50 E-value=49 Score=32.48 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHH
Q 007939 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (584)
Q Consensus 302 V~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~ 343 (584)
..++..+.|++..+.+ .. ++|+|+|||+.|.-.+.+..
T Consensus 126 ~~~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~a~qlak 163 (315)
T 3goh_A 126 CPLLTAWQAFEKIPLT-KQ---REVLIVGFGAVNNLLTQMLN 163 (315)
T ss_dssp HHHHHHHHHHTTSCCC-SC---CEEEEECCSHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhcCCC-CC---CEEEEECCCHHHHHHHHHHH
Confidence 4455566666433333 33 69999999888766555443
No 492
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.46 E-value=59 Score=31.20 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=24.5
Q ss_pred CCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
|+++++||.||++ ||...++..+. ++|. +++++|+.
T Consensus 13 l~gk~~lVTGas~---gIG~a~a~~la-~~G~-------~V~~~~r~ 48 (280)
T 3pgx_A 13 LQGRVAFITGAAR---GQGRSHAVRLA-AEGA-------DIIACDIC 48 (280)
T ss_dssp TTTCEEEEESTTS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred cCCCEEEEECCCc---HHHHHHHHHHH-HCCC-------EEEEEecc
Confidence 3339999999854 55555666666 4563 68899874
No 493
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=34.40 E-value=21 Score=40.47 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=28.4
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCcc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (584)
.+|+|+|||.+|+.+|-.|.+ .|. .++.++|+..+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCC
Confidence 689999999999999988765 353 26999998754
No 494
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=34.35 E-value=18 Score=36.81 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=25.1
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecC
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (584)
-+++|+|||.+|+..|..+.+. | .++.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-----N-------KKVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-----T-------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEecC
Confidence 5799999999999998877542 4 357788775
No 495
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=34.33 E-value=48 Score=33.73 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 305 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
...+.+++..+.+. . ++|+|+|||..|...+++.. ..|. +++.+|+
T Consensus 181 ~tA~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga-------~Vi~~~~ 226 (369)
T 1uuf_A 181 ITTYSPLRHWQAGP-G---KKVGVVGIGGLGHMGIKLAH-----AMGA-------HVVAFTT 226 (369)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHH-----HTTC-------EEEEEES
T ss_pred HHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HCCC-------EEEEEeC
Confidence 34456666654443 3 59999999866554443332 2343 4887775
No 496
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=34.25 E-value=30 Score=35.28 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhC-CCCCCCCCceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 302 VALAGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 302 V~LAgll~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
..++..+.|++..+ .+ .. ++|+|.|+|..|...+++... .|. .+++.+|+
T Consensus 178 ~~~~ta~~al~~~~~~~-~g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (380)
T 1vj0_A 178 CSGATAYHAFDEYPESF-AG---KTVVIQGAGPLGLFGVVIARS-----LGA------ENVIVIAG 228 (380)
T ss_dssp THHHHHHHHHHTCSSCC-BT---CEEEEECCSHHHHHHHHHHHH-----TTB------SEEEEEES
T ss_pred cHHHHHHHHHHhcCCCC-CC---CEEEEECcCHHHHHHHHHHHH-----cCC------ceEEEEcC
Confidence 34455566665443 22 23 699999988777655544332 342 36888875
No 497
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=34.09 E-value=27 Score=37.59 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=27.8
Q ss_pred ceEEEeCcchhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEecCccc
Q 007939 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (584)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLi 370 (584)
-.|||+|+|.||+..|-.+.+ .|+ ++.++++...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKK-----AGA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----HTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 689999999999998877654 354 58999987654
No 498
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=34.02 E-value=69 Score=34.13 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=41.5
Q ss_pred cccCC-cEEEeecCCCCCCCHHHHHHhhhcCCCCCe-----EEecCCCCCccCCCHHHHhcccCCcEEEEeCC
Q 007939 405 RKVKP-HVLLGLSGVGGVFNEEVLKAMRESDSVKPA-----IFAMSNPTMNAECTAADAFKHAGENIVFASGS 471 (584)
Q Consensus 405 ~~vkp-tvLIG~S~~~g~Fteevv~~M~~~~~erPI-----IFaLSNPt~~aE~tpeda~~wT~Grai~AsGS 471 (584)
+..+| +++|-.||++--.|+++.+.+.+ +++. ++-+|||....|-++++-.... ..|++.++
T Consensus 117 ~~l~~g~iVV~~STV~pgtt~~v~~~i~e---~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p--~~Iv~G~~ 184 (431)
T 3ojo_A 117 PFLKKGNTIIVESTIAPKTMDDFVKPVIE---NLGFTIGEDIYLVHCPERVLPGKILEELVHN--NRIIGGVT 184 (431)
T ss_dssp GGCCTTEEEEECSCCCTTHHHHTHHHHHH---TTTCCBTTTEEEEECCCCCCTTSHHHHHHHS--CEEEEESS
T ss_pred HhCCCCCEEEEecCCChhHHHHHHHHHHH---HcCCCcCCCeEEEECCCcCCCcchhhcccCC--CEEEEeCC
Confidence 33444 57788899887789998887644 3443 6789999988888876555432 23455443
No 499
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=33.88 E-value=57 Score=31.77 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.+++..+ --.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 110 ~~~ta~~~l~~~~-~~~g---~~vlV~Ga~G~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 158 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPG---EKVLVQAAAGALGTAAVQVARA-----MGL-------RVLAAAS 158 (302)
T ss_dssp HHHHHHHHHHHTT-CCTT---CEEEESSTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhc-CCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 4445556665444 2234 79999998 8777666554433 342 5888876
No 500
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=33.85 E-value=31 Score=34.59 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhhHHHHHHHHHHHHHHcCCChhhhcCcEEEEec
Q 007939 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (584)
Q Consensus 303 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (584)
.++..+.++...+.--.. ++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 143 ~~~ta~~~l~~~~~~~~g---~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 143 NYHTMYFAYARRGQLRAG---ETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 344455556333332334 69999998 8777666555433 353 5787776
Done!