BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007940
(584 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/598 (64%), Positives = 457/598 (76%), Gaps = 18/598 (3%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
M++ F PR D F PAGLRVLVVDDD WLKILEKMLKKC YEVT CGLARDAL+LLRER
Sbjct: 1 MDSAFCPPRTDVF-PAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KDGYDIVISDVNMPDMDGFKLLE VGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
IRMKELRNIWQHVFRKKI+EVRDIE+ E + + R+G +QS DG L++G D TSV+KR
Sbjct: 120 IRMKELRNIWQHVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVSG-DPTSVKKR 178
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
KD EN+HDDRD D SS KKARVVWS+DLHQKFV+AVNQIGFDKVGPKKILDLMNVPWLT
Sbjct: 179 KDTENKHDDRDHCDPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLT 238
Query: 241 RENVASHLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVS 299
RENVASHLQKYRLYL+RLQK D+LKTS GGIK D KDS SFG+ N +T H ND +
Sbjct: 239 RENVASHLQKYRLYLSRLQKEDDLKTSCGGIKHSDLSPKDSTGSFGLSN-LTNMHQNDAA 297
Query: 300 NGGYRFSGSNSVVQ--NVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFN 357
N GY FSG+ +VQ ++D K EGD+KGI ++P T K++LT + + KAR SQ+GFN
Sbjct: 298 NSGYGFSGNKKLVQSIDIDPKVQEGDLKGIISLPRTEQKKMLTGEASDPQKARSSQMGFN 357
Query: 358 GSFVPGHSDVNFTSFDSAIPTQ-PWS--EVSETQFQHEHKP-LRLENDFTQLPLPGPRHH 413
SF DVN+ +FDS+I Q WS +V E QFQ EH+P ++LE F QLP+PGP+HH
Sbjct: 358 DSFGSIEQDVNYAAFDSSISAQYSWSGEKVPEAQFQEEHRPSVQLETSFNQLPVPGPQHH 417
Query: 414 IQVDCIQ-SGPSASSKPSVVDKD-----NLKPFDCTYKSNY-PNAIPIGSAVDTFPVQTT 466
IQVDC+Q + P S S ++D +KP +Y S++ N GS +D F VQ+
Sbjct: 418 IQVDCLQPTLPPISPGSSRKERDKASPAKIKPLYASYDSHHVSNVSSAGSEIDLFSVQSK 477
Query: 467 SPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQ 526
+VN Q FEPI+ T +M++QG N S + DLE+ QRN+ G GS+L SL EDLQ+ WLQ
Sbjct: 478 CQMVNPQAFEPISNITLNMRNQGHNQSGVNDLESFQRNLISGSGSALESL-EDLQVHWLQ 536
Query: 527 GDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
GDC MNLGL++I FS+Y+D L +EVPFHLYD ++ DYE+ D TE PI+DQGLFIA
Sbjct: 537 GDCNPMNLGLRNIEFSDYHDQKLITEVPFHLYDPLKLDYEYLSDLTEYPIMDQGLFIA 594
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/592 (63%), Positives = 450/592 (76%), Gaps = 16/592 (2%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
MENGFSSPR+D F PAGLRVLVVDDD WLKILEKMLKKCSYEVTTCGLARDAL LLRER
Sbjct: 1 MENGFSSPRSDAF-PAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
IRMKELRNIWQHVFRKKIHEVRDIE +EG ESI M R GSD S DG L GEDLTSV+KR
Sbjct: 120 IRMKELRNIWQHVFRKKIHEVRDIEILEGMESIQMARIGSDHSDDGYLFCGEDLTSVKKR 179
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
KD EN+HDD+D G++S+TKKARVVWS+DLHQKFVKAVNQIG DKVGPKKILDLMNVPWLT
Sbjct: 180 KDIENKHDDKD-GESSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILDLMNVPWLT 238
Query: 241 RENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVS 299
RENVASHLQKYRLYL+RLQK+ + KTS+GGIKQ +S +SA SFG QNSI + DVS
Sbjct: 239 RENVASHLQKYRLYLSRLQKENDSKTSIGGIKQSESSLGESAGSFGTQNSINM-QQKDVS 297
Query: 300 NGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGS 359
NG Y FSG++ VQN + ++ E + KGI +R LTVDIP + K+R SQ+ F S
Sbjct: 298 NGNYGFSGNSLFVQNTEPRNHESEKKGIVLKNAAESRRALTVDIPETRKSRSSQVEFGHS 357
Query: 360 FVPGHSDVNFTSFDSAIPTQ-PWSEVSETQFQHEHKPLRLENDFTQLPLPGPRHHIQVDC 418
F+ S+VNF + S+ PTQ W E+ + Q + E KPL+L++ F +L LPG + HIQ D
Sbjct: 358 FISTASEVNFGAIGSSFPTQYSWCEIPQIQMKQEPKPLQLDDGFNKLQLPGQQQHIQADY 417
Query: 419 IQSGPSASSKPSVVDKD----NLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQP 474
Q P S S+ ++D +KP K N + G A+D+ +QT + + N+Q
Sbjct: 418 PQPVPPVISGSSITERDIDGPKIKPL-YESKQNASHVTSTGGAIDSSHIQTKTFVPNNQV 476
Query: 475 FEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCFAMNL 534
FEP +TS++K+QG N +CI D+E+AQ+++NWG ++ LD+D Q+CW QGD +AMN+
Sbjct: 477 FEPNCTSTSTIKNQGFNPNCISDVESAQKSVNWG----MSPLDDDFQVCWFQGDYYAMNV 532
Query: 535 GLQDINFSEYNDPALNSEVPFHLYDTMRFDYEH--YYDPTECPIIDQGLFIA 584
G Q+I E DP L ++VP HLYD +RFD + YD TE +++QGLFIA
Sbjct: 533 GRQNIELPENYDPGLIADVPTHLYDAVRFDCDSTLLYDLTEYSLVEQGLFIA 584
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/602 (61%), Positives = 445/602 (73%), Gaps = 31/602 (5%)
Query: 3 NGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
NGFSSPRND+F PAGLRVLVVDDD WLKILEKMLKKCSYEVTTCGLARDAL+LLRERK
Sbjct: 4 NGFSSPRNDSF-PAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKG 62
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
GYDIVISDV MPDMDGFKLLE VGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR
Sbjct: 63 GYDIVISDVYMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
Query: 123 MKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
MKELRNIWQHVFRKKIHEVRDIE +E ES MTR+GSDQ DG +L GEDLTS++KRK
Sbjct: 123 MKELRNIWQHVFRKKIHEVRDIETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKH 182
Query: 183 AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD------------------K 224
E++HD++D GD+ STKKARVVWS+DLHQKFVKAVNQIGFD +
Sbjct: 183 FESKHDEKDTGDSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAE 242
Query: 225 VGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAAS 283
VGPKKILD+MNVPWLTRENVASHLQKYRLYL+RLQK+ + K GG KQ DSP +DSA S
Sbjct: 243 VGPKKILDMMNVPWLTRENVASHLQKYRLYLSRLQKENDFKNPAGGTKQSDSPLRDSARS 302
Query: 284 FGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDI 343
FG QNSI + NDVSNG YRFSGS+ VV N D +S + D K + + PV KR LTV++
Sbjct: 303 FGSQNSINL-QPNDVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNV 361
Query: 344 PNSHKARCSQIGFNGSFVPGHSDVNFTSFDSAIPTQ-PWSEVSETQFQHEHKPLRLENDF 402
PN R SQ+ F P S+V+F + DS PT+ PW + E Q + EH PL L ++F
Sbjct: 362 PNPCIPRSSQMEFGHPLAPPQSEVDFGALDSTFPTKYPWCGIPEIQLKKEHNPLHLNDEF 421
Query: 403 TQLPLPGPRHHIQVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFP 462
+ LPLPG + Q D Q P+ SS PS L P Y+SN +A AVD+
Sbjct: 422 SHLPLPGQKQLTQADYPQPAPAISSAPS------LTPSHNEYRSNVNHASSTAIAVDSST 475
Query: 463 VQTTSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQL 522
+Q+ + + NHQ E I+++T S+++QG N++ I + E++++NIN G+ T+L+EDL++
Sbjct: 476 IQSKTSVANHQAIELISKSTPSLENQGFNMNSITEFESSRKNINLGM-LPFTTLEEDLRV 534
Query: 523 CWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLF 582
CW+ GDC+ MNLGLQ+I EY DP L ++VP +L D +RFDYE + DPTE +IDQ LF
Sbjct: 535 CWVPGDCY-MNLGLQNIEVLEYFDPGLLTDVPVNLNDGLRFDYE-FNDPTEYSLIDQSLF 592
Query: 583 IA 584
IA
Sbjct: 593 IA 594
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/650 (57%), Positives = 448/650 (68%), Gaps = 79/650 (12%)
Query: 3 NGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
NGFSSPRND+F PAGLRVLVVDDD WLKILEKMLKKCSYEVTTCGLARDAL+LLRERK
Sbjct: 4 NGFSSPRNDSF-PAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKG 62
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDLPVI---------------------------- 94
GYDIVISDV MPDMDGFKLLE VGLEMDLPVI
Sbjct: 63 GYDIVISDVYMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCL 122
Query: 95 --------------------MMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF
Sbjct: 123 HYIYIGILIQLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 182
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RKKIHEVRDIE +E ES MTR+GSDQ DG +L GEDLTS++KRK E++HD++D GD
Sbjct: 183 RKKIHEVRDIETLERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHIESKHDEKDTGD 242
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFD------------------KVGPKKILDLMNV 236
+ STKKARVVWS+DLHQKFVKAVNQIGFD +VGPKKILD+MNV
Sbjct: 243 SISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKKILDMMNV 302
Query: 237 PWLTRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHH 295
PWLTRENVASHLQKYRLYL+RLQK+ + K GGIKQ DSP +DSA SFG QNSI + H
Sbjct: 303 PWLTRENVASHLQKYRLYLSRLQKENDFKNPAGGIKQSDSPLRDSAGSFGSQNSINL-QH 361
Query: 296 NDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIG 355
NDVSNG YRFSGS+ VV N D +S + D K + + PV KR LTV++PN R SQ+
Sbjct: 362 NDVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNVPNPCIPRSSQME 421
Query: 356 FNGSFVPGHSDVNFTSFDSAIPTQ-PWSEVSETQFQHEHKPLRLENDFTQLPLPGPRHHI 414
F P S+V+F + DS PT+ PW + E Q + EH PL L ++F+ LPLPG +
Sbjct: 422 FGHPLAPPQSEVDFGALDSTFPTKYPWCGIPEIQLKKEHNPLHLNDEFSHLPLPGQKQLT 481
Query: 415 QVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQP 474
Q D Q P+ SS PS L P Y+SN +A AVD+ P+QT + + NHQ
Sbjct: 482 QADYPQPAPAISSAPS------LTPSHNEYRSNVNHASSTAIAVDSSPIQTKTNVANHQA 535
Query: 475 FEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCFAMNL 534
E I+++T S+++QG N++ I + E++++NIN G+ T+L+EDLQ+CW+ GDC+ MNL
Sbjct: 536 IELISKSTPSLENQGFNMNSITEFESSRKNINLGM-LPFTTLEEDLQVCWVPGDCY-MNL 593
Query: 535 GLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
GLQ+I EY DP L ++VP +L D +RFDYE + DPTE +IDQ LFIA
Sbjct: 594 GLQNIEVLEYFDPGLITDVPVNLNDGLRFDYE-FNDPTEYSLIDQSLFIA 642
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/607 (58%), Positives = 421/607 (69%), Gaps = 68/607 (11%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
MENGFSSPRND+F PAGLRVLVVDDD WLKILEKMLK+CSYEVTTCGLARDAL+LLRER
Sbjct: 1 MENGFSSPRNDSF-PAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
K GYDIVISDV MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KGGYDIVISDVFMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
IRMKELRNIWQHVFRKKIHEVRDIE +EG ES MTR+GSDQ DG L GEDLT ++KR
Sbjct: 120 IRMKELRNIWQHVFRKKIHEVRDIEILEGIESFQMTRNGSDQYEDGHFLCGEDLTLIKKR 179
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD----------------- 223
KD E++HD++D GD +S KKARVVWS++LHQKFVKAVNQIGFD
Sbjct: 180 KDIESKHDEKDNGDNTSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCL 239
Query: 224 -KVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSA 281
+VGPKKILDLMNVP LTRENVASHLQKYRLYL+RLQK ++ VG IKQ DSP DS
Sbjct: 240 AEVGPKKILDLMNVPRLTRENVASHLQKYRLYLSRLQKGNDFNNPVGMIKQSDSPLSDSV 299
Query: 282 ASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTV 341
SFG QNSI + DVSNG Y FS S+ V+ NVD +S +GD K + T PV KR LTV
Sbjct: 300 GSFGSQNSINLQPI-DVSNGCYGFSVSSLVLHNVDPRSHDGDRKILVTTPVAEPKRGLTV 358
Query: 342 DIPNSHKARCSQIGFNGSFVPGHSDVNFTSFDSAIPTQPWSEVSETQFQHEHKPLRLEND 401
D PN K R SQ+ F P +D
Sbjct: 359 DAPNPRKPRISQMEFGHPLAPHFND----------------------------------G 384
Query: 402 FTQLPLPGPRHHIQVDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYPNAIPIGS 456
F+ LP+PG + + D Q + SS PS+ +++ +KP Y SN + +
Sbjct: 385 FSHLPMPGQKQLTRADYPQPARAVSSAPSLTEREIGCPVKIKPSRNDYGSNASHVNSTAN 444
Query: 457 AVDTFPVQTTSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSL 516
AVD+ P+QT + NHQ +TSSM++QGLN++C+ D+E++++NIN G+ L
Sbjct: 445 AVDSIPLQTKTNSTNHQ-----VSSTSSMENQGLNMNCLTDVESSRKNINLGM-PPFAPL 498
Query: 517 DEDLQLCWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPI 576
DEDLQ+ ++ GD + M+LGLQ+I EY DP+L ++VP HL D +RFDYE +YDPTE +
Sbjct: 499 DEDLQVRFVPGD-YYMSLGLQNIEVPEYFDPSLLTDVPIHLNDGLRFDYE-FYDPTEYSL 556
Query: 577 IDQGLFI 583
IDQ LFI
Sbjct: 557 IDQSLFI 563
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/599 (60%), Positives = 430/599 (71%), Gaps = 29/599 (4%)
Query: 1 MENG-FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M+NG FSSPR D PAGLRVLVVDDD WLKILEKMLKKC+YEVTTC LAR ALSLLRE
Sbjct: 1 MDNGCFSSPRRDF--PAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRE 58
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK
Sbjct: 59 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 118
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
PIRMKELRNIWQHV RK+IHE ++ E+ E FESIH+ R+GS+ S DG L ED+TS +K
Sbjct: 119 PIRMKELRNIWQHVLRKRIHEAKEFESFESFESIHLMRNGSELSDDGNLFAVEDVTSTKK 178
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
RKDA+N+HDD++C D SSTKKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 179 RKDADNKHDDKECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 238
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
TRENVASHLQKYRLYL+R+QK+ + ++S G+K D P KD SFG QNS+ NDV
Sbjct: 239 TRENVASHLQKYRLYLSRIQKENDQRSSSSGLKHSDFPLKD-MRSFGFQNSVNNQQQNDV 297
Query: 299 SNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHK-RVLTVDIPNSHKARCSQIGFN 357
+ Y S + +QNV+ KS E D KGI + K R+LT +I +++ ++G N
Sbjct: 298 AIDSYNHSDGSLQLQNVETKSHEADPKGIVSQSTIAKKGRILTGNIADTNMRESLRVGLN 357
Query: 358 GSFVPGHSDVNFTSFDSAIPT-QPWSEVSETQFQHEHKPL-RLENDFTQLPLPGP-RHHI 414
+F P S+ N FD ++PT W+EV Q + EHK + LE+ F QLPL G + HI
Sbjct: 358 QTFAPLESEENHAVFDCSMPTPYTWTEVPHMQLKEEHKSIVHLEDSFNQLPLHGKQQQHI 417
Query: 415 QVDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYPNAI-PIGSAVDTFPVQTTSP 468
QVD QS S SS P + +++ KP YK++Y N++ IG+AV TFP+Q S
Sbjct: 418 QVDQSQSVASISSAPLITEEEVAACKEPKPLFADYKNDYANSVSSIGNAVGTFPIQPGSL 477
Query: 469 IVNHQPFEPIARTTSSMKSQGL-NLSCIPDLEAAQRNINWGVG-SSLTSLDEDLQLCWLQ 526
I+N Q EPI+ T S +K+QG NLS I DLE Q N+ G +S SLDEDL WLQ
Sbjct: 478 IMNGQSSEPISTTNSGLKTQGYNNLSSISDLEIYQSNLLLGGEVASAPSLDEDLHFYWLQ 537
Query: 527 GDCF-AMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
G+C+ MN LQ+I SEY DP L SE P HLYD+ DY +IDQGLFIA
Sbjct: 538 GECYNNMNFSLQNIGMSEYYDPGLISEAPTHLYDSA--DYS---------VIDQGLFIA 585
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 353/592 (59%), Positives = 420/592 (70%), Gaps = 43/592 (7%)
Query: 1 MENG-FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M+NG FSSP+ D PAGLRVLVVDDD WLKILEKMLKKC+YEVTTC LAR ALSLLRE
Sbjct: 1 MDNGCFSSPKRDF--PAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRE 58
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETS+VMKGVQHGACDYLLK
Sbjct: 59 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLK 118
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
PIRMKELRNIWQHVFRKKIHE ++ E+ FESIH+ R+GS+ S DG L ED+TS +K
Sbjct: 119 PIRMKELRNIWQHVFRKKIHEAKEFES---FESIHLMRNGSELSDDGNLFAVEDVTSSKK 175
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
RKDA+++HDD++C D SSTKKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 176 RKDADSKHDDKECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 235
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
TRENVASHLQKYRLYL+R+QK+ + ++S G+K D PSKD SFG QNS+ + NDV
Sbjct: 236 TRENVASHLQKYRLYLSRIQKENDQRSSSSGMKHSDFPSKD-MGSFGFQNSV-IKQQNDV 293
Query: 299 SNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHK-RVLTVDIPNSHKARCSQIGFN 357
+ Y S + +QNV+ KS E D KGI + K R+LT +I +++ ++G N
Sbjct: 294 AIDNYNHSDGSLQLQNVETKSHEADPKGIVSQSTIAKKGRILTGNIADTNMRESLRVGLN 353
Query: 358 GSFVPGHSDVNFTSFDSAIPT-QPWSEVSETQFQHEHKPL-RLENDFTQLPLPGP-RHHI 414
+F P S+ N FD ++PT W+EV Q + EHK L LE+ F QLPL G + HI
Sbjct: 354 QTFPPLESEGNHAVFDCSMPTPYSWTEVPHMQLKEEHKSLVYLEDSFNQLPLHGKQQQHI 413
Query: 415 QVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQP 474
VD QS S SS PS+ +++ +AV TFP+Q S I+N Q
Sbjct: 414 HVDQSQSVASISSAPSITEEE----------------AAAWNAVATFPIQPGSLIMNGQS 457
Query: 475 FEPIARTTSSMKSQGL-NLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCF-AM 532
E I+ TTS +K+Q NLS I D E QRN+ G ++ SLDEDL WL+G+C+ M
Sbjct: 458 SERISTTTSGLKTQEYNNLSSISDQEIYQRNL-LGCEAASASLDEDLHFYWLEGECYNNM 516
Query: 533 NLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
N GLQ+I SEY DP L SE P HLYD+ DY ++DQGLFIA
Sbjct: 517 NFGLQNIGMSEYYDPGLISEAPIHLYDSA--DYS---------VMDQGLFIA 557
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 350/599 (58%), Positives = 420/599 (70%), Gaps = 30/599 (5%)
Query: 1 MENG-FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M+NG FSSPR+D F PAGLRVLVVDDD WL+ILEKMLKKC YEVTTC LA +AL LRE
Sbjct: 1 MDNGCFSSPRHDAF-PAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRE 59
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
RKD YDIVISDVNMPDMDGFKLLE VGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK
Sbjct: 60 RKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEG--FESIHMTRSGSDQSVDGPLLTGEDLTSV 177
PIRMKELRNIWQHVFRK++HE RD E+ EG FE IH+ R+GSD S DG L E++TS+
Sbjct: 120 PIRMKELRNIWQHVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEEITSI 179
Query: 178 RKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 237
+KRKDA+N+HDD++ GD S KKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNVP
Sbjct: 180 KKRKDADNKHDDKEFGDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 239
Query: 238 WLTRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHN 296
WLTRENVASHLQKYRLYL+RLQK+ + K+S GIK DSPSKD SF I ++ N
Sbjct: 240 WLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKD-PGSFSILDTAN-KQQN 297
Query: 297 DVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGF 356
DV+ + +S + ++Q +DA S EG++KGI + P T +R T DIP+ + SQ
Sbjct: 298 DVAIDSFSYSDGSLLLQ-MDATSHEGNLKGIVSEPTTEKRRGSTGDIPDPKIQKSSQKSL 356
Query: 357 NGSFVP-GHSDVNFTSFDSAIPTQ-PWSEVSETQFQHEHKPL-RLENDFTQLPL--PGPR 411
N F S+ N FD IPTQ WSE + + E K L +LE+ +QLPL G +
Sbjct: 357 NQPFTSVESSEANHAVFDCTIPTQYSWSEFPKGPLKEEQKTLVQLEDSLSQLPLHGNGTQ 416
Query: 412 HHIQVDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYPNAI-PIGSAVDTFPVQT 465
HHI VD QS S +S PS+ +++ KP Y+S+Y + + IGSAV+ FP Q+
Sbjct: 417 HHIHVDQSQSIASINSNPSITEEEVAAKLETKPLYAGYESDYVSPVSSIGSAVEVFPSQS 476
Query: 466 TSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWL 525
S +VN Q EP + S+K+QG N CI DL+ QRN+ G + L+EDL L
Sbjct: 477 KSLMVNDQSSEPTFTSNLSLKAQGFNRDCISDLDFYQRNLLLGGEVASAPLEEDLNFFLL 536
Query: 526 QGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
Q +C+ MN GLQ+I+ SEY DP L +EVP H YD+ DY +DQ LFIA
Sbjct: 537 QTECYNMNFGLQNIDMSEYYDPRLIAEVPSHFYDSA--DYSS---------VDQSLFIA 584
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 353/595 (59%), Positives = 415/595 (69%), Gaps = 36/595 (6%)
Query: 1 MENG-FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M+NG FSSPR D PAGLRVLVVDDD WLKILEKMLKKC+YEVTTC LAR ALSLLRE
Sbjct: 1 MDNGCFSSPRRDF--PAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRE 58
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK
Sbjct: 59 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 118
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
PIRMKELRNIWQHVFRK+IHEVR+ EN E FES+H+ R+GS+ S +G L ED+TS +K
Sbjct: 119 PIRMKELRNIWQHVFRKRIHEVREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKK 178
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
RKD ++RHDD++ D+SS+KKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 179 RKDVDSRHDDKEFLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 238
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
+RENVASHLQKYRLYL+RLQKD E K+S G+K D PSKD +FG NS ND
Sbjct: 239 SRENVASHLQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKD-VGNFGFPNSAN-KQQNDA 296
Query: 299 SNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHK-RVLTVDIPNSHKARCSQIGFN 357
S Y +S + QN++ KS EG+ KGI K R LT +I ++ + N
Sbjct: 297 SIDKYNYSEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARALTGNITDA-----TDTALN 351
Query: 358 GSFVPGHSDVNFTSFDSAIPT-QPWSEVSETQFQHEHKP-LRLENDFTQLPLPGPRHHIQ 415
F P S+ +FD + T W+E+ +TQ + E K + LE+ F LPL G +H+IQ
Sbjct: 352 KPFAPLESERKRGAFDCNMSTPYSWTEIPKTQLKKEQKSVVHLEDKFNLLPLNGKQHNIQ 411
Query: 416 VDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYP-NAIPIGSAVDTFPVQTTSPI 469
VD QS S SS PS+ ++D KP YK +Y + I S+VDTFP Q S +
Sbjct: 412 VDQSQSIASISSTPSITEQDVAACVETKPTFSDYKKDYTSSVSSIRSSVDTFPFQPGSLM 471
Query: 470 VNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDC 529
+N QP +PI+ T +K+Q NLSCI DLE+ QRN+ G ++ LDEDL W
Sbjct: 472 MNDQPTQPISTTNFGLKTQTSNLSCISDLESYQRNLLLGGEAASAPLDEDLYFYW----- 526
Query: 530 FAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
MN G Q+I SEY DP L EVP HLYD+ DY +IDQGLFIA
Sbjct: 527 HNMNFGQQNIGMSEYYDPGLLIEVPNHLYDSA--DYS---------VIDQGLFIA 570
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 349/595 (58%), Positives = 411/595 (69%), Gaps = 36/595 (6%)
Query: 1 MENG-FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M+NG F SPR D PAGLRVLVVDDD WLKILEKMLKKC+YEVTTC LAR ALSLLRE
Sbjct: 1 MDNGCFPSPRRDF--PAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRE 58
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
RKDGYDIVISDVNMPDMDGFKLL HVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK
Sbjct: 59 RKDGYDIVISDVNMPDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 118
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
PIRMKELRNIWQHVFRK+IHE R+ EN E FES+H+ R+GS+ S +G L ED+TS +K
Sbjct: 119 PIRMKELRNIWQHVFRKRIHEAREFENFESFESMHLMRNGSEMSEEGNLFALEDMTSTKK 178
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
RKD ++RHDD++ D+SS+KKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 179 RKDVDSRHDDKEFLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 238
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
+RENVASHLQKYRLYL+RLQKD E K+S G+K D PSKD +FG NS ND
Sbjct: 239 SRENVASHLQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKD-VGNFGFPNSAN-KQQNDA 296
Query: 299 SNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHK-RVLTVDIPNSHKARCSQIGFN 357
S Y +S + QN++ KS EG+ KGI K R LT +I ++ + N
Sbjct: 297 SIDKYNYSEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARALTGNITDA-----TDTALN 351
Query: 358 GSFVPGHSDVNFTSFDSAIPT-QPWSEVSETQFQHEHKP-LRLENDFTQLPLPGPRHHIQ 415
F P S+ +FD + T W+E+ +TQ + E K + LE+ F LPL G +H+IQ
Sbjct: 352 KPFAPLESERKRGAFDCNMSTPYSWTEIPKTQLKKEQKSVVHLEDKFNLLPLNGKQHNIQ 411
Query: 416 VDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYP-NAIPIGSAVDTFPVQTTSPI 469
VD QS S SS PS+ ++D KP YK +Y + I S+VDTFP Q S +
Sbjct: 412 VDQSQSIASISSTPSITEQDVAACVETKPTFSDYKKDYTSSVSSIRSSVDTFPFQPGSLM 471
Query: 470 VNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDC 529
+N QP +PI+ T +K+Q NLSCI DLE+ QRN+ G ++ LDEDL W
Sbjct: 472 MNDQPTQPISTTNFGLKTQTSNLSCISDLESYQRNLLLGGEAASAPLDEDLYFYW----- 526
Query: 530 FAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
MN G Q+I SEY DP EVP HLYD+ DY +IDQGLFIA
Sbjct: 527 HNMNFGQQNIGMSEYYDPGPLIEVPNHLYDSA--DYS---------VIDQGLFIA 570
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 335/598 (56%), Positives = 406/598 (67%), Gaps = 31/598 (5%)
Query: 1 MENGF--SSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLR 58
M+NG SSPR+D F PAGLRVLVVDD + + L S VTTC LA +AL LR
Sbjct: 1 MDNGCFSSSPRHDAF-PAGLRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLR 57
Query: 59 ERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
ERK+ YDIVISDVNMPDMDGFKLLE VGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL
Sbjct: 58 ERKEAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 119 KPIRMKELRNIWQHVFRKKIHEVRDIENIEG--FESIHMTRSGSDQSVDGPLLTGEDLTS 176
KPIRMKELRNIWQHVFRK++HE RD E+ EG FE IH+ R+GSD S DG L E+ TS
Sbjct: 118 KPIRMKELRNIWQHVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEETTS 177
Query: 177 VRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
++KRKDA+N+HDD++ GD TKKARVVWS+DLHQKFVKAVNQIGFDKVGPKKILDLMNV
Sbjct: 178 IKKRKDADNKHDDKEFGDHFPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNV 237
Query: 237 PWLTRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHH 295
PWLTRENVASHLQKYRLYL+RLQK+ + K+S GIK DSPSKD SF N+
Sbjct: 238 PWLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKD-LGSFSFLNTAN-KQQ 295
Query: 296 NDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIG 355
ND++ + +S ++Q +DA S EGD+KGI + P T +R T +IP+ + SQ
Sbjct: 296 NDIATDSFSYSDGTLLIQ-MDATSYEGDLKGIVSEPTTEKRRASTSEIPDPKVQKSSQKS 354
Query: 356 FNGSFVP-GHSDVNFTSFDSAIPTQ-PWSEVSETQFQHEHK-PLRLENDFTQLPLPGPRH 412
N F S+ N FD IPT+ WSE + + E K P++LE+ QLPL G +H
Sbjct: 355 LNKPFTSVESSEANHAVFDCTIPTEYSWSEFPKGPLKEEQKTPVQLEDSLCQLPLHGTQH 414
Query: 413 HIQVDCIQSGPSASSKPSVVDKD-----NLKPFDCTYKSNYPNAI-PIGSAVDTFPVQTT 466
HIQ+D QS S +S PS+ +++ KP Y+S+Y N + IGSAV+ F Q+
Sbjct: 415 HIQIDQSQSIASINSNPSITEEEVAAKLETKPLYAGYESDYVNPVSSIGSAVEAFRSQSK 474
Query: 467 SPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQ 526
S +V+ Q EP + S+K+QG NL CI DL+ QRN+ G + LDEDL LQ
Sbjct: 475 SLMVSDQSSEPTFTSNLSLKTQGFNLDCISDLDFYQRNLLLGGEVASAPLDEDLNFFLLQ 534
Query: 527 GDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
+C+ MN GLQ+I+ SEY DP L +EVP H YD+ DY +DQ LFIA
Sbjct: 535 SECYNMNFGLQNIDMSEYYDPRLTAEVPSHFYDSA--DYSS---------VDQSLFIA 581
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 405/596 (67%), Gaps = 25/596 (4%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
MENGFSSPR+D F P GLRVLVVDDD WLKILEKMLKKCSYEVTTC LAR+ALSLLRER
Sbjct: 1 MENGFSSPRSDVF-PIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
IRMKELRNIWQHV RKKI E RDIE + E IH+ R+ +D+ D L GE+ SVRKR
Sbjct: 120 IRMKELRNIWQHVLRKKIQEGRDIEGHDVIEGIHILRNVADRYDDSQFLRGEEPFSVRKR 179
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
KD ++H+D+D D SSTKKARVVWS++LHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT
Sbjct: 180 KDI-DKHEDKDFCDTSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 238
Query: 241 RENVASHLQKYRLYLTRLQK--DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
RENVASHLQKYRLYL+RLQK D V G+K KDS SKD +FG+++S+ V NDV
Sbjct: 239 RENVASHLQKYRLYLSRLQKENDPKACFVVGMKPKDSCSKDGDGNFGLRSSLAV-PQNDV 297
Query: 299 SNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNG 358
+N + FSG N ++QNVD+ E D K I T KR + +P K RC Q+ FN
Sbjct: 298 TNSSFSFSGDNFLLQNVDSIGCEVDRKRIVQEHTTEPKRAASRSVPEPIKTRCPQMKFNN 357
Query: 359 SFVPGHSDVNFTSFD-SAIPTQPWSEVSETQFQHEHKPLRLENDFTQLPLPGPRHHIQVD 417
+ + F +FD S PW E E +F+ E KP+ Q P P +Q+D
Sbjct: 358 TIHIVEPEGKFAAFDPSNRSCYPWVEAPEIKFKQESKPIVHLEGVNQFPPTVPPRQVQMD 417
Query: 418 CIQ------SGPSASSKPSVVDKDNLKPF--DCTYKSNYPNAIPIGSAVDTFPVQTTSPI 469
+Q SG SA+ K ++ P+ +C+ + + N +P + D+F + S
Sbjct: 418 QLQSISSISSGRSATEKDIASSIESKPPYSENCSQQRVHLN-LP-KTPTDSFAGKAKSFN 475
Query: 470 VNHQPFEPIARTTSSM-KSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGD 528
+ F+P + TT+ + K+Q N SCI + G G ++DEDLQ LQ
Sbjct: 476 EMNDHFDPNSTTTTPLGKNQNFNPSCI--------STGLGSGLPFATIDEDLQGFLLQDG 527
Query: 529 CFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
C+ NL Q I F +Y DP + +EVP HLYD MRF Y++ YDPTE P+ID+GLFIA
Sbjct: 528 CYPKNLEHQIIEFPDYGDPGIFTEVPTHLYDAMRFGYDYSYDPTEYPVIDEGLFIA 583
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/593 (51%), Positives = 383/593 (64%), Gaps = 43/593 (7%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
ME+GF SPR + F PAGLRVLVVDDD WLKILEKMLKKCSYEVTTC LARDAL++LRER
Sbjct: 1 MESGFCSPRTEAF-PAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KDG+DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
+RMKEL+NIWQHVFRKKIHE +D+E+ E I M S SD+ DG L G +L + RKR
Sbjct: 120 VRMKELKNIWQHVFRKKIHEGKDVESYECMREIQMIMSRSDEFDDGHQLNGGELGATRKR 179
Query: 181 KDAEN-RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
KD EN RHDD++ D SS+KKARVVWSIDLHQKFV AVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 180 KDMENRRHDDQELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWL 239
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
TRENVASHLQKYRLYL+RLQK+ ELKTS G+KQ+D A S G Q S T+ H D
Sbjct: 240 TRENVASHLQKYRLYLSRLQKENELKTS-EGMKQQDFTC--PAGSLGFQTS-TLIHPKDA 295
Query: 299 SNGGYRFSGSNSVVQNVDAK-SLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARC-SQIGF 356
+N +++G+N ++ ++ + E D KG +I K T + +S +A SQ
Sbjct: 296 ANCDLKYTGNNMLLIDMGTRICREADKKGTVSILPMDLKETSTSNFLDSQRANVSSQTIL 355
Query: 357 NGSFVPGHSDVNFTSFDSAIPTQPWSEVSETQF----QHEHKPLR-LENDFTQLPLPGPR 411
+ F N+ S S +Q W+E QF + E +P LE+DF+ P+
Sbjct: 356 SRPF-------NYQSSQSNTTSQKWNEAPMEQFKQPPKQEPEPYALLEDDFSHALQSAPQ 408
Query: 412 HHIQVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVN 471
H +QVD S S +V ++D P ++ I + V + S IVN
Sbjct: 409 HLVQVDLQCSAYSVGPGTAVPERDK------------PGSVMI-TPVRSQSRSNHSQIVN 455
Query: 472 HQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCFA 531
+ + I+ MK+Q + L+C+ D E Q+ I + VG S SL + G +
Sbjct: 456 PETSDAISNFKVGMKNQMVGLNCLNDCEPIQQKI-FTVGDS--SLGSQV------GCAYT 506
Query: 532 MNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
++GLQDI+ +Y + L E+ Y + ++++ D + P +DQ LF A
Sbjct: 507 ESIGLQDIDLLDYYNSELIDELETSYYADLGLNWDNDCDSVQNPFVDQSLFTA 559
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 297/593 (50%), Positives = 369/593 (62%), Gaps = 73/593 (12%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
ME+GF SPR + F PAGLRVLVVDDD WLKILEKMLKKCSYEVTTC LARDAL++LRER
Sbjct: 1 MESGFCSPRTEAF-PAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRER 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KDG+DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
Sbjct: 60 KDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
+RMKEL+NIWQHVFRKKIHE G+DL + RKR
Sbjct: 120 VRMKELKNIWQHVFRKKIHE------------------------------GKDLGATRKR 149
Query: 181 KDAEN-RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
KD EN RHDD++ D SS+KKARVVWSIDLHQKFV AVNQIGFDKVGPKKILDLMNVPWL
Sbjct: 150 KDMENRRHDDQELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWL 209
Query: 240 TRENVASHLQKYRLYLTRLQKD-ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
TRENVASHLQKYRLYL+RLQK+ ELKTS G+KQ+D A S G Q S T+ H D
Sbjct: 210 TRENVASHLQKYRLYLSRLQKENELKTS-EGMKQQDFTC--PAGSLGFQTS-TLIHPKDA 265
Query: 299 SNGGYRFSGSNSVVQNVDAK-SLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARC-SQIGF 356
+N +++G+N ++ ++ + E D KG +I K T + +S +A SQ
Sbjct: 266 ANCDLKYTGNNMLLIDMGTRICREADKKGTVSILPMDLKETSTSNFLDSQRANVSSQTIL 325
Query: 357 NGSFVPGHSDVNFTSFDSAIPTQPWSEVSETQF----QHEHKPLR-LENDFTQLPLPGPR 411
+ F N+ S S +Q W+E QF + E +P LE+DF+ P+
Sbjct: 326 SRPF-------NYQSSQSNTTSQKWNEAPMEQFKQPPKQEPEPYALLEDDFSHALQSAPQ 378
Query: 412 HHIQVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVN 471
H +QVD S S +V ++D P ++ I + V + S IVN
Sbjct: 379 HLVQVDLQCSAYSVGPGTAVPERDK------------PGSVMI-TPVRSQSRSNHSQIVN 425
Query: 472 HQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCFA 531
+ + I+ MK+Q + L+C+ D E Q+ I + VG S SL + G +
Sbjct: 426 PETSDAISNFKVGMKNQMVGLNCLNDCEPIQQKI-FTVGDS--SLGSQV------GCAYT 476
Query: 532 MNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
++GLQDI+ +Y + L E+ Y + ++++ D + P +DQ LF A
Sbjct: 477 ESIGLQDIDLLDYYNSELIDELETSYYADLGLNWDNDCDSVQNPFVDQSLFTA 529
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/251 (85%), Positives = 230/251 (91%), Gaps = 1/251 (0%)
Query: 8 PRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIV 67
PRND+F PAGLRVLVVDDD WLKILEKMLK+CSYEVTTCGLARDAL+LLRERK GYDIV
Sbjct: 1 PRNDSF-PAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIV 59
Query: 68 ISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
ISDV MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR
Sbjct: 60 ISDVYMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 119
Query: 128 NIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH 187
NIWQHVFRKKIHEVRDIE +EG ES MTR+GSD DG L GEDLT ++KRKD E++H
Sbjct: 120 NIWQHVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLCGEDLTLIKKRKDIESKH 179
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
D++D GD +S KKARVVWS++LHQKFVKAVNQIGFDKVGPKKILDLMNVP LTRENVASH
Sbjct: 180 DEKDIGDNTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRENVASH 239
Query: 248 LQKYRLYLTRL 258
LQKYRLYL+RL
Sbjct: 240 LQKYRLYLSRL 250
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 290/584 (49%), Positives = 353/584 (60%), Gaps = 80/584 (13%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+P GLRVLVVDDD WLKILEKMLKKCSYEVTTCGLAR+AL LLRERKDGYDIVISDVN
Sbjct: 6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVN 65
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLEHVGLE+DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL+ IWQH
Sbjct: 66 MPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQH 125
Query: 133 VFRKKIHEVRDIENIEGFE--SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH--- 187
V RKK+ EVRDIE G+E + +TR + G GED++ +KRKD +
Sbjct: 126 VLRKKLQEVRDIEGC-GYEGGADWITRYDEAHFLGG----GEDVSFGKKRKDFDFEKKLL 180
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVAS 246
D +SS+KKARVVWS +LH KFV AVNQIG D K GPKKILDLMNVPWLTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 247 HLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
HLQKYRLYL+RL+K ELK GG+K DS KD + G Q+ Y F
Sbjct: 241 HLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSP---------GRSSYVF 291
Query: 306 SGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHS 365
SG NS++Q K+ E D K + + ++ L D+ K + ++IGF+
Sbjct: 292 SGGNSLIQ----KATEIDPKPLASASLSD----LNTDVIMPPKTKKTRIGFD-------P 336
Query: 366 DVNFTSFDSAIPTQPWSEVSETQFQHEHKPLRLENDF-TQLPLPGPRHHIQVDCIQSGPS 424
++ ++FDS + PW++V E E KP+ EN F Q PLP QS
Sbjct: 337 PISSSAFDSLL---PWNDVPEVL---ESKPVLYENSFLQQQPLPS----------QSSYV 380
Query: 425 ASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPV-QTTSPIVNHQPFEPIARTTS 483
A+S PS+++++ P++ + NA D F + Q P V Q +P S
Sbjct: 381 ANSAPSLMEEEMKPPYETPAGGSSVNA-------DEFLMPQDKIPTVTLQDLDP-----S 428
Query: 484 SMKSQGLNLSCIPDLEAAQRNINWGVGSS--LTSLDEDLQLCWLQGDCFAMNLGLQDINF 541
+MK Q N EA R++NW + S SLD DL L WLQG+ F N GLQ ++
Sbjct: 429 AMKLQEFN------TEAILRSLNWELPESHHSVSLDTDLDLTWLQGERFLANTGLQFQDY 482
Query: 542 SEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECP-IIDQGLFIA 584
S + Y R DP E ++DQGLFI+
Sbjct: 483 SSSPSLLSELPAHLNWYGNERLP-----DPDEYSFMVDQGLFIS 521
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 296/584 (50%), Positives = 363/584 (62%), Gaps = 72/584 (12%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+P GLRVLVVDDD WLKILEKMLKKCSYEVTTCGLAR+AL LLRERKDGYDIVISDVN
Sbjct: 6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVN 65
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLEHVGLE+DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL+ IWQH
Sbjct: 66 MPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQH 125
Query: 133 VFRKKIHEVRDIENIEGFE--SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH--- 187
V RKK+ EVRDIE G+E +TR + G GED++ +KRKD +
Sbjct: 126 VLRKKLQEVRDIEGC-GYEGGGDWITRYDEAHFLGG----GEDVSFGKKRKDFDFEKKLL 180
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVAS 246
D +SS+KKARVVWS +LHQKFV AVNQIG D K GPKKILDLMNVPWLTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 247 HLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
HLQKYRLYL+RL+K ELK GG+K DS KD + G Q+ Y F
Sbjct: 241 HLQKYRLYLSRLEKGKELKCYSGGVKNMDSSPKDVEVNSGYQSP---------GKSSYVF 291
Query: 306 SGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHS 365
SG NS++Q V E D K + + ++ D+ K + ++IGF+
Sbjct: 292 SGGNSLIQKV----TEIDPKPLASASLSDP----NTDVIMPPKTKKTRIGFDPPI----- 338
Query: 366 DVNFTSFDSAIPTQPWSEVSETQFQHEHKPLRLENDF-TQLPLPGPRHHIQVDCIQSGPS 424
+ ++FDS + PW++V ET E KP+ EN F Q PLP QS
Sbjct: 339 -SSSSAFDSLL---PWNDVPETL---ESKPVLYENSFLQQQPLPS----------QSSYV 381
Query: 425 ASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPV-QTTSPIVNHQPFEPIARTTS 483
A+S PS+++++ P++ + NA D F + Q +P V Q +P A S
Sbjct: 382 ANSVPSLMEEEMKPPYETPAGGSSVNA-------DEFLMPQDKNPTVTLQDLDPSA--IS 432
Query: 484 SMKSQGLNLSCIPDLEAAQRNINWGVGSSLT-SLDEDLQLCWLQGDCFAMNLGLQDINFS 542
+MK Q + + + EA R++NW S + SLD DL L WL G+ F N GLQ F
Sbjct: 433 NMKLQEFSSNVTNNTEAILRSLNWEPESHHSASLDTDLDLSWLHGERFLANTGLQ---FQ 489
Query: 543 EY-NDPALNSEVPFHLYDTMRFDYEHYYDPTECP-IIDQGLFIA 584
+Y + P+L SE+ HL+ + E DP E ++DQGLFI+
Sbjct: 490 DYSSSPSLLSELSPHLW----YGNERLPDPDEYSFVVDQGLFIS 529
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/599 (45%), Positives = 349/599 (58%), Gaps = 47/599 (7%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLAR AL +LRERK+ +DIVISDV
Sbjct: 4 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDV 63
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLEH+GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 64 NMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 123
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + + + + R+ + + L D ++RKRKD + H D++
Sbjct: 124 HVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQE 183
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLMNVP LTRENVASHLQKY
Sbjct: 184 SSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKY 243
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL+RLQK + +G +Q D K ++ + +++S N ++N GY + N
Sbjct: 244 RLYLSRLQKQNEERILGAARQ-DFSHKGTSENLNLRSSFQEQPSN-IAN-GYPHASQNIQ 300
Query: 312 VQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHK-ARCSQIGFNGSF--VPGHSDVN 368
Q S D K +PV KR L D +S S +G SF +P + D
Sbjct: 301 TQANMLDSQLEDTKSTVPLPVPDKKRTLASDAADSQNVTSASSLGGVLSFKSMPVNQDRK 360
Query: 369 FTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGP 423
S + Q W+ + QF +H H+ L D++ LP P H + + + P
Sbjct: 361 -PSETMILECQAWTGGIPSKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPVGPSNLYAPP 419
Query: 424 -----SASSKPSVVDKDNLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFE 476
S + D ++KP DC KS P + VD+ VQ + +V
Sbjct: 420 PLISMSCGMEGDARDFSDVKPAIMDCI-KSLSP---ALTCTVDSVSVQLSDSVV------ 469
Query: 477 PIARTTSSMKSQGLN-LSCIPDLEAAQRNINWG---------VGSS-LTSLDEDLQLCWL 525
+KS G++ L I D Q N +GS+ L SL EDL L
Sbjct: 470 --TSIDGDLKSSGVDGLPSIKDCCLDQTNSQGSLRPSQEPSIIGSTELASLPEDLPSYPL 527
Query: 526 QGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
G N+GL I+ Y+D + S + + YD + F E + P ID+ LF +
Sbjct: 528 HGVSLE-NIGLSSIDLLNYSDAMILSGLQSNWYDDLEFSSEMM----DYPSIDECLFAS 581
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/599 (45%), Positives = 349/599 (58%), Gaps = 47/599 (7%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLAR AL +LRERK+ +DIVISDV
Sbjct: 4 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDV 63
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLEH+GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 64 NMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 123
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + + + + R+ + + L D ++RKRKD + H D++
Sbjct: 124 HVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQE 183
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLMNVP LTRENVASHLQKY
Sbjct: 184 SSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKY 243
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL+RLQK + +G +Q D K ++ + +++S N ++N GY + N
Sbjct: 244 RLYLSRLQKQNEERILGAARQ-DFSHKGTSENLNLRSSFQEQPSN-IAN-GYPHASQNIQ 300
Query: 312 VQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHK-ARCSQIGFNGSF--VPGHSDVN 368
Q S D K +PV KR L D +S S +G SF +P + D
Sbjct: 301 TQANMLDSQLEDTKSTVPLPVPDKKRTLASDAADSQNVTSASSLGGVLSFKSMPVNQDRK 360
Query: 369 FTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGP 423
S + Q W+ + QF +H H+ L D++ LP P H + + + P
Sbjct: 361 -PSETMILECQAWTGGIPSKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPVGPSNLYAPP 419
Query: 424 -----SASSKPSVVDKDNLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFE 476
S + D ++KP DC KS P + VD+ VQ + +V
Sbjct: 420 PLISMSCGMEGDARDFSDVKPAIMDCI-KSLSP---ALTCTVDSVSVQLSDTVV------ 469
Query: 477 PIARTTSSMKSQGLN-LSCIPDLEAAQRNINWG---------VGSS-LTSLDEDLQLCWL 525
+KS G++ L I D Q N +GS+ L SL EDL L
Sbjct: 470 --TSIDGDLKSSGVDGLPSIKDCCLDQTNSQGSLRPSQEPSIIGSTELASLPEDLPSYPL 527
Query: 526 QGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLFIA 584
G N+GL I+ Y+D + S + + YD + F E + P ID+ LF +
Sbjct: 528 HGVSLE-NIGLSSIDLLNYSDAMILSGLQSNWYDDLEFSSEMM----DYPSIDECLFAS 581
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 271/603 (44%), Positives = 347/603 (57%), Gaps = 51/603 (8%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLAR AL +LRERK+ +DIVISDV
Sbjct: 4 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDV 63
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLEH+GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 64 NMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 123
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + + + + R+ + + L D ++RKRKD + H D++
Sbjct: 124 HVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQE 183
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDK----VGPKKILDLMNVPWLTRENVASH 247
D ++ KKARVVWS+DLHQKFV AVNQIGFD GPKKILDLMNVP LTRENVASH
Sbjct: 184 SSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVPGLTRENVASH 243
Query: 248 LQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSG 307
LQKYRLYL+RLQK + +G +Q D K ++ + +++S N ++N GY +
Sbjct: 244 LQKYRLYLSRLQKQNEERILGAARQ-DFSHKGTSENLNLRSSFQEQPSN-IAN-GYPHAS 300
Query: 308 SNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHK-ARCSQIGFNGSF--VPGH 364
N Q S D K +PV KR L D +S S +G SF +P +
Sbjct: 301 QNIQTQANMLDSQLEDTKSTVPLPVPDKKRTLASDAADSQNVTSASSLGGVLSFKSMPVN 360
Query: 365 SDVNFTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCI 419
D S + Q W+ + QF +H H+ L D++ LP P H + +
Sbjct: 361 QDRK-PSETMILECQAWTGGIPSKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPVGPSNL 419
Query: 420 QSGP-----SASSKPSVVDKDNLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNH 472
+ P S + D ++KP DC KS P + VD+ VQ + +V
Sbjct: 420 YAPPPLISMSCGMEGDARDFSDVKPAIMDCI-KSLSP---ALTCTVDSVSVQLSDSVV-- 473
Query: 473 QPFEPIARTTSSMKSQGLN-LSCIPDLEAAQRNINWG---------VGSS-LTSLDEDLQ 521
+KS G++ L I D Q N +GS+ L SL EDL
Sbjct: 474 ------TSIDGDLKSSGVDGLPSIKDCCLDQTNSQGSLRPSQEPSIIGSTELASLPEDLP 527
Query: 522 LCWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGL 581
L G N+GL I+ Y+D + S + + YD + F E + P ID+ L
Sbjct: 528 SYPLHGVSLE-NIGLSSIDLLNYSDAMILSGLQSNWYDDLEFSSEMM----DYPSIDECL 582
Query: 582 FIA 584
F +
Sbjct: 583 FAS 585
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 266/586 (45%), Positives = 339/586 (57%), Gaps = 30/586 (5%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLAR AL +LRERK +DIVISDV
Sbjct: 6 TVFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDV 65
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLEH+GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 66 NMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 125
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RK++HEV++IE + + + + R G + + + D + RKRKD + H D+D
Sbjct: 126 HVYRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSDTTRKRKDLDKDHADQD 185
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLMNVP +TRENVASHLQKY
Sbjct: 186 SSDGATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGITRENVASHLQKY 245
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL RLQK + +G +Q D +K ++ + +++S N + GY +
Sbjct: 246 RLYLGRLQKQNEERILGAARQ-DFSNKGTSENLNLRSSFQDQPSN--VSSGYPHASQKIQ 302
Query: 312 VQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHK-ARCSQIGFNGSF--VPGHSDVN 368
Q+ S D K +P + R D+ +S A S + SF +P + D N
Sbjct: 303 GQSSMLDSQLEDTKCTVPLPASDKSRNSVNDVADSQNVADASPLSGVLSFKGLPVNQDNN 362
Query: 369 FTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGP 423
S + Q W+ V QF +H H L D+ LP P H + P
Sbjct: 363 -PSETMIMECQTWNGGVPSKQFMQYPKHNHARCDLLGDYACLPKPDLEHPAAPGNFFTPP 421
Query: 424 SASSKPSVVDKD-----NLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFE 476
S ++ D ++KP DC KS P + VD+ VQ + +V +
Sbjct: 422 PLISMSCSMELDARNFSDVKPALLDCI-KSLSP---ALTCTVDSVSVQLSDSVVTSTSSD 477
Query: 477 PIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTSLDEDLQLCWLQGDCFAMNLGL 536
T + S P + + + G+ L SL EDL LQG F N+GL
Sbjct: 478 RKFSTVEGLPYFDQTNSQGPLFRSQEPSTTCGL--DLASLPEDLPSYPLQGVPFE-NIGL 534
Query: 537 QDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLF 582
I+ YND L + + + YD D E + T+ P++D LF
Sbjct: 535 SSIDLFHYNDTMLLAGLQSNWYD----DQEFISETTDYPLMDGCLF 576
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/597 (45%), Positives = 343/597 (57%), Gaps = 46/597 (7%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLA A+ +LRER++ +DIVISDV
Sbjct: 7 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDV 66
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLE +GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 67 NMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 126
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + ++ + M R+G + + L D ++RKRKD H D+D
Sbjct: 127 HVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQD 186
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLMNVP LTRENVASHLQKY
Sbjct: 187 SSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKY 246
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL+RLQK + +G +Q D K + +++S N +SNG S
Sbjct: 247 RLYLSRLQKQNEERIMGAARQ-DFNQKGPSDHLNLRSSFQEQPGN-LSNGCQHSSQKVEA 304
Query: 312 VQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSF----VPGHSDV 367
N+ L+ D K + V + D + H + +G F +P + D
Sbjct: 305 QTNILDPHLD-DTKTSMPLKVPDKNGISASDAVDPHNITTAS-PLSGVFSFERMPVNQDR 362
Query: 368 NFTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSG 422
+ + + WS V QF +H H+ L D++ LP P H I + +
Sbjct: 363 KLSE-TMILECESWSGSVPPKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPIAPGHLYAP 421
Query: 423 PSASSKPSVVDKD-----NLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPF 475
P S V+KD ++KP C KS P + V++ Q + +V
Sbjct: 422 PPVISMSYNVEKDVRDFSDVKPDLLGCM-KSLSP---ALTCTVESVSAQLSDSVVTSTNS 477
Query: 476 EPIARTTSSMKSQGLNLSCIPDLEAAQ-RN---------INWGVGSSLTSLDEDLQLCWL 525
+ R SS++ LS I D + Q RN + G+ T L EDL L
Sbjct: 478 D---RKFSSVEG----LSSIKDCDFDQERNGAILFTSEEASILCGTDFTCLPEDLSGYQL 530
Query: 526 QGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLF 582
QG F N GL I+ + ND L + + YD D E + E P++D GLF
Sbjct: 531 QGVSFG-NKGLNSIDLYQCNDTMLIPGLQNNWYDD---DVEFSSETVEFPLLDGGLF 583
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/492 (52%), Positives = 311/492 (63%), Gaps = 66/492 (13%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+P GLRVLVVDDD WLKILEKMLKKCSYEVTTCGLAR+AL LLRERKDGYDIVISDVN
Sbjct: 6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVN 65
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLEHVGLE+DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL+ IWQH
Sbjct: 66 MPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQH 125
Query: 133 VFRKKIHEVRDIENIEGFE--SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH--- 187
V RKK+ EVRDIE G+E + +TR + G GED++ +KRKD +
Sbjct: 126 VLRKKLQEVRDIEGC-GYEGGADWITRYDEAHFLGG----GEDVSFGKKRKDFDFEKKLL 180
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVAS 246
D +SS+KKARVVWS +LH KFV AVNQIG D K GPKKILDLMNVPWLTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 247 HLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
HLQKYRLYL+RL+K ELK GG+K DS KD + G Q+ Y F
Sbjct: 241 HLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSP---------GRSSYVF 291
Query: 306 SGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHS 365
SG NS++Q K+ E D K + + ++ L D+ K + ++IGF+
Sbjct: 292 SGGNSLIQ----KATEIDPKPLASASLSD----LNTDVIMPPKTKKTRIGFD-------P 336
Query: 366 DVNFTSFDSAIPTQPWSEVSETQFQHEHKPLRLENDF-TQLPLPGPRHHIQVDCIQSGPS 424
++ ++FDS + PW++V E E KP+ EN F Q PLP QS
Sbjct: 337 PISSSAFDSLL---PWNDVPEVL---ESKPVLYENSFLQQQPLPS----------QSSYV 380
Query: 425 ASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPV-QTTSPIVNHQPFEPIARTTS 483
A+S PS+++++ P++ + NA D F + Q P V Q +P S
Sbjct: 381 ANSAPSLMEEEMKPPYETPAGGSSVNA-------DEFLMPQDKIPTVTLQDLDP-----S 428
Query: 484 SMKSQGLNLSCI 495
+MK Q N I
Sbjct: 429 AMKLQEFNTEAI 440
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 270/596 (45%), Positives = 341/596 (57%), Gaps = 44/596 (7%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLA A+ +LRER++ +DIVISDV
Sbjct: 7 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDV 66
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLE +GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 67 NMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 126
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + ++ + M R+G + + L D ++RKRKD H D+D
Sbjct: 127 HVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKDHADQD 186
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLMNVP LTRENVASHLQKY
Sbjct: 187 SSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKY 246
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL+RLQK + +G +Q D K + +++S N +SNG S
Sbjct: 247 RLYLSRLQKQNEERIMGAARQ-DFNQKGPSDHLNLRSSFQEQPGN-LSNGCQHSSQKVEA 304
Query: 312 VQNVDAKSLEGDVKGIDTIPV---TGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHSDVN 368
N+ L+ D K + V G VD N A F+ +P + D
Sbjct: 305 QTNILDPHLD-DTKTSMPLKVPDKNGISASDAVDPQNITTASPLSGVFSFERMPVNQDRK 363
Query: 369 FTSFDSAIPTQPW-SEVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGP 423
+ + Q W V QF +H H+ L D++ LP P H I + + P
Sbjct: 364 LSE-TMILECQSWIGSVPPKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPIAPGHLYAPP 422
Query: 424 SASSKPSVVDKD-----NLKP--FDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFE 476
S V++D ++KP C KS P + V++ Q + +V +
Sbjct: 423 PVISMSYNVEEDVRDFSDVKPDLLGCM-KSLSP---ALTCTVESVSAQLSDSVVTSTNSD 478
Query: 477 PIARTTSSMKSQGLNLSCIPDLEAAQ-RN---------INWGVGSSLTSLDEDLQLCWLQ 526
R SS++ LS I D + Q RN + G+ T L EDL LQ
Sbjct: 479 ---RKFSSVEG----LSSIKDCDFDQERNGAILFTSEEASILCGTDFTCLPEDLSGYQLQ 531
Query: 527 GDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLF 582
G F N GL I+ + ND L + + YD D E + E P++D GLF
Sbjct: 532 GVSFG-NKGLNSIDLYQCNDTMLIPGLQNNWYDD---DVEFSSETVEFPLLDGGLF 583
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/486 (51%), Positives = 304/486 (62%), Gaps = 61/486 (12%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+P GLRVLVVDDD WLKILEKMLKKCSYEVTTCGLAR+AL LLRERKDGYDIVISDVN
Sbjct: 6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVN 65
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLEHVGLE+DLPVIMMSVDGETSRVMKGV GACDYLLKPIRMKEL+ IWQH
Sbjct: 66 MPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQH 125
Query: 133 VFRKKIHEVRDIENIEGFE--SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH--- 187
V RKK+ EVRDIE G+E + +TR + G GED++ +KRKD +
Sbjct: 126 VLRKKLQEVRDIEGC-GYEGGADWITRYDEAHFLGG----GEDVSFGKKRKDFDFEKKLL 180
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVAS 246
D +SS+KKARVVWS +LH KFV AVNQIG D K GPKKILDLMNVPWLTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 247 HLQKYRLYLTRLQK-DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
HLQKYRLYL+RL+K ELK GG+K DS KD + G Q+ Y F
Sbjct: 241 HLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSP---------GRSSYVF 291
Query: 306 SGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHS 365
SG NS++Q K+ E D K + + ++ D+ K + ++IGF+
Sbjct: 292 SGGNSLIQ----KATEIDPKPLASASLSDP----NTDVIMPPKTKKTRIGFD-------P 336
Query: 366 DVNFTSFDSAIPTQPWSEVSETQFQHEHKPLRLENDF-TQLPLPGPRHHIQVDCIQSGPS 424
++ ++FDS + PW++V E E KP+ EN F Q PLP QS
Sbjct: 337 PISSSAFDSLL---PWNDVPEVL---ESKPVLYENSFLQQQPLPS----------QSSYV 380
Query: 425 ASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPV-QTTSPIVNHQPFEPIARTTS 483
A S PS+++++ P++ + NA D F + Q P V Q +P A
Sbjct: 381 AISAPSLMEEEMKPPYETPAGGSSVNA-------DEFLMPQDKIPTVTLQDLDPSAMKLQ 433
Query: 484 SMKSQG 489
++G
Sbjct: 434 EFNTEG 439
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 263/599 (43%), Positives = 335/599 (55%), Gaps = 55/599 (9%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T P GLRVLVVDDD WLKILEKML+KCSYEVTTCGLA AL +LRER++ +DIVISDV
Sbjct: 7 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDV 66
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
NMPDMDGFKLLE +GLEMDLPVIMMS+DGETSRVMKGVQHGACDYLLKP+RMKELRNIWQ
Sbjct: 67 NMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQ 126
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
HV+RKK+HEV++IE + + + + R+G + + L D ++RKRKD + H D+D
Sbjct: 127 HVYRKKMHEVKEIEGNDSCDDLQIFRNGVEGFDERGLFMRADSDTMRKRKDMDKDHADQD 186
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D ++ KKARVVWS+DLHQKFV AVNQIGFDKVGPKKILDLM+VP LTRENVASHLQKY
Sbjct: 187 SSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGLTRENVASHLQKY 246
Query: 252 RLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSV 311
RLYL+RLQK + +G +Q D K + + +++S N +SNG S
Sbjct: 247 RLYLSRLQKQNEERIMGAARQ-DFSHKGPSDNLNLRSSFEEQPGN-LSNGFQHSSQKIQA 304
Query: 312 VQNVDAKSLEGDVKGIDTIPV-----TGHKRVLTVDIPNSHKARCSQIGFNGSFVPGHSD 366
N+ L+ D K ++P+ G VD N A F+ +P + D
Sbjct: 305 QTNIPDPHLD-DTKT--SVPLKVPDKNGTSVSDAVDPQNITSASPLSGVFSFERMPVNQD 361
Query: 367 VNFTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQS 421
+ + Q WS V QF +H H+ L D++ LP P H I
Sbjct: 362 RKLSE-TMILECQSWSGSVPPKQFMQYPKHNHERCDLLGDYSCLPKPDLEHPI------- 413
Query: 422 GPSASSKP----SVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFEP 477
P P S+V+ D + P+ I ++ T +
Sbjct: 414 APGHLYAPAPVISMVEGDAR-----NFSDVKPDLIACMKSLSPALTCTVESVSAQLSDSA 468
Query: 478 IARTTSSMKSQGLN-LSCIPDLEAAQ-RNINWGVGSSLTSLDEDLQLCWL-------QGD 528
+ T S K + LS I D + Q RN + S S+ L WL QG
Sbjct: 469 VTSTNSDQKFSSVEGLSSIKDCDFDQERNQATLLTSEEASIICGTDLTWLHDDLSGYQGV 528
Query: 529 CFAMNLGLQDINFSEYND-----PALNSEVPFHLYDTMRFDYEHYYDPTECPIIDQGLF 582
F+ N+GL I+ + ND P L + + YD D E + E ++D GLF
Sbjct: 529 SFS-NIGLNSIDLFQCNDTMGALPGLQN----NWYD----DIELSSETMEIQLLDGGLF 578
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/415 (52%), Positives = 272/415 (65%), Gaps = 61/415 (14%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
M +GFSSP N+ F PAGLRVLVVD+D W +ILEKMLKKCSY+V TCG +RDAL++LR R
Sbjct: 2 MIHGFSSPLNNDF-PAGLRVLVVDNDPTWSRILEKMLKKCSYQVATCG-SRDALNMLRGR 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
KD YDIVI DV DMDGF+LLEH+GL+MD PVI S S + KGV+HGACDYLLKP
Sbjct: 60 KDEYDIVICDVTTSDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
IRMKELRNIWQHVFRK+IHEVR+ E + GSDQ+ DGPLL GEDL SV+KR
Sbjct: 120 IRMKELRNIWQHVFRKRIHEVRECEIL-----------GSDQACDGPLLRGEDLASVKKR 168
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
K A+ + D SS K AR+VW++DLHQKFVKAV+QIGFDK+GPKKILD MNVPWLT
Sbjct: 169 KYADQK------ADISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLT 222
Query: 241 RENVASHLQKYRLYLTRLQKDE-----------LKTSVG--------------GIKQKDS 275
RENVA HLQKYRLYL+RLQ ++ LK +G I S
Sbjct: 223 RENVAGHLQKYRLYLSRLQTEKDLKFAGLYSSVLKKQIGLRIACVYLNKIASNFINFSVS 282
Query: 276 PSKDS--AASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIP-V 332
PS+DS + S G +I ++ ++ G F+G++ ++ NV+ +S E D + I ++P +
Sbjct: 283 PSRDSPRSISTGYSCNIRQNYASNGGGGSSGFTGNDLILHNVENRSYETDEEEIVSMPLI 342
Query: 333 TGHKRVL-----------TVDIPNSHKARCSQIGFNGSFVPGHSDVNFTSFDSAI 376
+R++ TVD P+ +R SQ GF+ S S+V F +FDS
Sbjct: 343 KDQERIVSLPLAEPWTSTTVDDPDPWNSRTSQTGFSRS---SESEVRFAAFDSTF 394
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 254/623 (40%), Positives = 335/623 (53%), Gaps = 104/623 (16%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKK--------CSY-------EVT 45
ME+G PR D F PAGLRVL VDDD AWLKIL + +K C VT
Sbjct: 1 MESG---PRTDAF-PAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVT 56
Query: 46 TCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRV 105
TC +ARDALS+L+ERK+ +DI+ISDVNMPDMDGF+LLEH+ +EMDLPVI++SVDGE +RV
Sbjct: 57 TCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRV 116
Query: 106 MKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVD 165
MKG+Q GACDYLLKP+RM+EL+NIWQHV RKKIHE G S M S++ D
Sbjct: 117 MKGIQSGACDYLLKPVRMEELKNIWQHVLRKKIHE--------GKNSQVMISRSSNELDD 168
Query: 166 GPLLTGEDLTSVRKRKDAENR-HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDK 224
G L G ++++ RKRKD ENR HDD+ + S++KKARVVWSIDLHQKFV V QIG+D+
Sbjct: 169 GQQLNGGEVSATRKRKDMENRRHDDQKSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDR 228
Query: 225 --------------VGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
PKKILDLMNVPWLTRENVASHLQ YR YL++L+K+ S G+
Sbjct: 229 FCIDGVLMVIHLTEARPKKILDLMNVPWLTRENVASHLQ-YRFYLSKLRKENEVKSSQGM 287
Query: 271 KQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLE-GDVKGIDT 329
Q+D A SFG Q S + H +NG + +G+N + + + D K +
Sbjct: 288 MQQDFTR--PAGSFGFQTS-NLMHQKHAANGNPKXTGNNMPLIDKGTRFCHXADKKATAS 344
Query: 330 IPVTGHKRVLTVDIPNSHKAR---CSQIGFNGSFVPGHSDVNFTSFDSAIPTQPWSEV-S 385
I L VD+ + + C + + + H N S S TQ W+EV
Sbjct: 345 I--------LPVDLKETSASNFLDCQRANVSSQTILSHP-FNHQSSQSNTTTQTWNEVLM 395
Query: 386 ETQF-----QHEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGPSASSKPSVVDKDNLKPF 440
E QF Q + L++DF+ L P+H +QVD S + SV ++D KP
Sbjct: 396 EQQFKQPPNQDPELYVLLDDDFSHALLSAPQHLLQVDLQCSANAVGPGTSVPERD--KP- 452
Query: 441 DCTYKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEA 500
+V P+ + S + Q +P TS IP +
Sbjct: 453 ---------------GSVMIIPLCSQSRSDHGQIVDP---ETSD---------AIPSFKV 485
Query: 501 AQRNINWGVGSSLTSLDEDLQLCWLQGDCFAMNLGLQDIN-FSEYNDPALNSEVPFHLYD 559
+N + VG S SL + G ++GLQDI+ F YN Y+
Sbjct: 486 GMKNQVFAVGDS--SLGSQV------GCTITESIGLQDIDLFDCYNSELFAELEETCYYN 537
Query: 560 TMRFDYEHYYDPTECPIIDQGLF 582
+ F + +D + P++DQGLF
Sbjct: 538 HLGFKWNKDWDSIQNPVVDQGLF 560
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 261/625 (41%), Positives = 337/625 (53%), Gaps = 88/625 (14%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYE------------------VTTCGLARDA 53
T P GLRVLVVDDD WLKILEKML+KCSYE VTTCGLA A
Sbjct: 7 TAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVA 66
Query: 54 LSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVI----------MMSVDGETS 103
L +LRER++ +DIVISDVNMPDMDGFKLLE +GLEMDLPVI +MS+DGETS
Sbjct: 67 LQILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDGETS 126
Query: 104 RVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS 163
RVMKGV HGACDYLLKP+RMKELRNIWQHV+RKK+HEV++IE+ G D+
Sbjct: 127 RVMKGVHHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIED------------GLDER 174
Query: 164 VDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD 223
L D ++RKRK+ + H D+D D ++ KKARVVWS+DLHQKFV AVNQIGFD
Sbjct: 175 ---GLFMRADTDTMRKRKEVDKDHADQDSSDGATAKKARVVWSVDLHQKFVNAVNQIGFD 231
Query: 224 KVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAAS 283
KVGPKKILDLMNV LTRENVASHLQKYRLYL+RLQK + +G +Q D K + +
Sbjct: 232 KVGPKKILDLMNVHGLTRENVASHLQKYRLYLSRLQKQNEERIMGAARQ-DFNQKGPSDN 290
Query: 284 FGIQNSITVHHHNDVSNGGYRFSGSNSVVQ---NVDAKSLEGDVKGIDTIPVTGHKRVLT 340
+++S N ++NG F S+ VQ N+ L+ D K + V
Sbjct: 291 LNLRSSFQEQPGN-LTNG---FQHSSQKVQSQTNILDPHLD-DTKTSVPLKVPDKNGTSA 345
Query: 341 VDIPNSHK-ARCSQIGFNGSF----VPGHSDVNFTSFDSAIPTQPWS-EVSETQF----Q 390
D + S +G G F +P + D + + Q WS V QF +
Sbjct: 346 SDAADHQNITGVSPLGGGGVFSFERMPVNQDTKLSEA-MILECQSWSGGVPPKQFMQYPK 404
Query: 391 HEHKPLRLENDFTQLPLPGPRHHIQVDCIQSGP-----SASSKPSVVDKDNLKP--FDCT 443
H H+ L D++ LP P H I + + P S S + V D ++KP C
Sbjct: 405 HNHERCDLLGDYSCLPKPDLEHPIAPSHLYAPPPVISMSCSVEGDVRDFSDVKPDLLGC- 463
Query: 444 YKSNYPNAIPIGSAVDTFPVQTTSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQ- 502
KS P + V++ Q + +V+ + + SS++ C D E Q
Sbjct: 464 MKSLSP---ALTCTVESVSAQLSDSVVSSTNND---KKISSVEGLSSVKDCDFDQERNQA 517
Query: 503 -----RNINWGVGSSLTSLDEDLQLCWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHL 557
+ + LT L ++L LQG F ++GL I+ + ND + + +
Sbjct: 518 ILLTSEEASILCSTDLTCLPDELSGYQLQGVSFG-DIGLNSIDLFQCNDTMVLPGLQNNW 576
Query: 558 YDTMRFDYEHYYDPTECPIIDQGLF 582
YD F E E P++D GLF
Sbjct: 577 YDDPDFSNE----TMEFPLLDGGLF 597
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 204/411 (49%), Positives = 264/411 (64%), Gaps = 31/411 (7%)
Query: 36 MLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIM 95
MLKKCSYE+TTC +ARDALS+L+ERK+ +DI+ISDVNMPDMDGF+LLEH+ +EMDLPVI+
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
+SVDGE +RVMKGVQ GACDYLLKP+RM+EL+NIWQHV RKKIH EG S M
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIH--------EGKNSQVM 112
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAEN-RHDDRDCGDASSTKKARVVWSIDLHQKFV 214
S++ DG L G ++++ RKRKD EN RHDD+ + S++KKARVVWSIDLHQKFV
Sbjct: 113 ISRSSNELDDGQQLNGGEVSATRKRKDMENRRHDDQKSVEPSTSKKARVVWSIDLHQKFV 172
Query: 215 KAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKD 274
V QIG+DK PKKILDLMNVPWLTRENVASHLQKYR YL++L+K+ S G+ Q+D
Sbjct: 173 DVVTQIGYDKARPKKILDLMNVPWLTRENVASHLQKYRFYLSKLRKENKVKSSQGMMQQD 232
Query: 275 SPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSL-EGDVKGIDTIPVT 333
A SFG Q S + H +NG +++G+N + + + E D K +I
Sbjct: 233 FTR--PAGSFGFQTS-NLMHQKHAANGNPKYTGNNMPLIDKGTRFCHEADKKATASI--- 286
Query: 334 GHKRVLTVDIPNSHKAR---CSQIGFNGSFVPGHSDVNFTSFDSAIPTQPWSEV-SETQF 389
L VD+ + + C + + + H N S S TQ W+EV E QF
Sbjct: 287 -----LPVDLKETSASNFLDCQRANVSSQTILSHP-FNHQSSQSNTTTQTWNEVLMEQQF 340
Query: 390 QH--EHKP---LRLENDFTQLPLPGPRHHIQVDCIQSGPSASSKPSVVDKD 435
+ P + L++DF+ L P+H +QVD S + SV ++D
Sbjct: 341 KQPPNQDPELYVLLDDDFSHALLSAPQHLLQVDLQCSANAVGPGTSVPERD 391
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/248 (62%), Positives = 187/248 (75%), Gaps = 4/248 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L+ILE+ML++C Y VTTC A+ AL+LLRERK +D+V+SDV+MP
Sbjct: 40 PAGLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMP 99
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS DG TS VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 100 DMDGFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 159
Query: 135 RKKIHEVRDIENIEGFE-SIHMTRSGSDQSVDGPLLTG-EDLTSVRKRKDAENRHDDR-- 190
RKK HE ++IE+ E + R D + G E + +KR+ DD
Sbjct: 160 RKKWHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDDGEP 219
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D D S++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASHLQK
Sbjct: 220 DSDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQK 279
Query: 251 YRLYLTRL 258
+RLYL RL
Sbjct: 280 FRLYLKRL 287
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/258 (59%), Positives = 186/258 (72%), Gaps = 12/258 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVLVVDDD L ILE ML++C Y VTTCG A AL+LLRE K+ +D+VISDV MP
Sbjct: 32 PVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMP 91
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIMMS DG+ + VMKG+ HGACDYLLKP+RM+ELRNIWQH+
Sbjct: 92 DMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLV 151
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV--RKRKDA--ENRHDDR 190
RK+ +E R+ E + E+ + G D E L+S +KRKD E+ D
Sbjct: 152 RKRKNEARETETLTPAEADKLKGGGGDDV--------EHLSSACSKKRKDVKEEDEGVDH 203
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D D SS KK RVVWS++LHQ+FV AVN++ DK PKKIL+LM+VP LTRENVASHLQK
Sbjct: 204 DSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASHLQK 263
Query: 251 YRLYLTRLQKDELKTSVG 268
YRLYL R+ + + S G
Sbjct: 264 YRLYLKRISAQQPQNSAG 281
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/253 (60%), Positives = 194/253 (76%), Gaps = 5/253 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ LKILE+ML++C Y VTTC A AL++LRE+K +DIV+S
Sbjct: 26 SDQF-PAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLS 84
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDG+KLLEHVGLEMDLPVIMMS DG TS VM+G++HGACDYL+KPIR +EL+NI
Sbjct: 85 DVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNI 144
Query: 130 WQHVFRKKIHEVRDIENIEGFE-SIHMTRSGSDQSVDGPLLTGED--LTSVRKRKDAENR 186
WQHV RKK +E ++ E+ E + R G D + G + L +KR+D+++
Sbjct: 145 WQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKDE 204
Query: 187 HD-DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D + + D S++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVA
Sbjct: 205 DDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 264
Query: 246 SHLQKYRLYLTRL 258
SHLQK+RLYL RL
Sbjct: 265 SHLQKFRLYLKRL 277
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/253 (59%), Positives = 190/253 (75%), Gaps = 5/253 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ L++LEKML +C Y VTTC A AL LLRERK +D+V+S
Sbjct: 31 SDQF-PAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLS 89
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIMMS DG TS VM+G++HGACDYL+KPIR +EL+NI
Sbjct: 90 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNI 149
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLT--GEDLTSVRKRKDAENRH 187
WQHV RKK +E ++ E+ FE + G+D + + + E + +K+++
Sbjct: 150 WQHVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEE 209
Query: 188 DDR--DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
DD + D S++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVA
Sbjct: 210 DDNELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 269
Query: 246 SHLQKYRLYLTRL 258
SHLQK+RLYL RL
Sbjct: 270 SHLQKFRLYLKRL 282
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 190/253 (75%), Gaps = 5/253 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ L++LEKML +C Y VTTC A AL LLRERK +D+V+S
Sbjct: 31 SDQF-PAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLS 89
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIMMS DG TS VM+G++HGACDYL+KPIR +EL+NI
Sbjct: 90 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNI 149
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLT--GEDLTSVRKRKDAENRH 187
WQHV RKK +E ++ E+ FE + G+D + + + E + +K+++
Sbjct: 150 WQHVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEE 209
Query: 188 DDR--DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
DD + D S++KK RVVWS++LHQ+FV AVNQ+G D+ PK+IL+LMNVP LTRENVA
Sbjct: 210 DDNELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDEAVPKRILELMNVPGLTRENVA 269
Query: 246 SHLQKYRLYLTRL 258
SHLQK+RLYL RL
Sbjct: 270 SHLQKFRLYLKRL 282
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 151/244 (61%), Positives = 184/244 (75%), Gaps = 3/244 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILEKML+ C Y+VT C A DALSLLR+ K+G+DIV+SDV+MP
Sbjct: 21 PAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDVHMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE++GLEMDLPVIMMSVD + VMKGV HGACDYL+KP+RM+ L+NIWQHV
Sbjct: 81 DMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQHVV 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ +E +D+E + ++ D G S R++ D E+ ++RD D
Sbjct: 141 RKRKNEWKDLEQTCVDDVDRQQKTNEDADYSSSANEGSWRNSKRRKDDVED-PEERD--D 197
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
+S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVASHLQKYRLY
Sbjct: 198 SSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLY 257
Query: 255 LTRL 258
L RL
Sbjct: 258 LRRL 261
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 157/276 (56%), Positives = 192/276 (69%), Gaps = 14/276 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVLVVDDD L ILE ML++C Y VTTCG A AL+LLRE K+ +D+VISDV MPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
GFKLLE VGLEMDLPVIMMS DG+ + VMKG+ HGACDYLLKP+RM+ELRNIWQH+ RK+
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV--RKRKDA--ENRHDDRDCG 193
+E R+ E + E+ + G D E L+S +KRKD E+ D D
Sbjct: 121 KNEARETETLTPAEADKLKGGGGDDV--------EHLSSACSKKRKDVKEEDEGVDHDSE 172
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
D SS KK RVVWS++LHQ+FV AVN++ DK PKKIL+LM+VP LTRENVASHLQKYRL
Sbjct: 173 DPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASHLQKYRL 232
Query: 254 YLTRLQKDELKTSVG-GIKQKDSPSKDSA-ASFGIQ 287
YL R+ + + S G D P++ SF +Q
Sbjct: 233 YLKRISAQQPQNSAGFSFGGVDGPAEGRGHGSFSLQ 268
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/257 (61%), Positives = 191/257 (74%), Gaps = 10/257 (3%)
Query: 3 NGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
NG S D F PAGLRVLVVDDD L+ILEKMLK C YEVTTC A AL LR++++
Sbjct: 21 NGLS----DQF-PAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRN 75
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
YDIVISDV+MPDMDGFKLLEHVGLEMDLPV MMS D + VMKGV HGACDYL+KPIR
Sbjct: 76 VYDIVISDVHMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIR 135
Query: 123 MKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPL-LTGEDLTSVRKRK 181
M+ L+NIWQH+ RK+ HE ++ + + S+ + D +D L ++ E+ + +KRK
Sbjct: 136 MEALKNIWQHLVRKRQHEWKEKDLDQHLGSVDEQKLPED--LDYSLSVSEENWNTSKKRK 193
Query: 182 DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
D E+ D+D D SS KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP L+R
Sbjct: 194 DEEDEAVDKD--DTSSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSR 251
Query: 242 ENVASHLQKYRLYLTRL 258
ENVASHLQKYRLYL RL
Sbjct: 252 ENVASHLQKYRLYLRRL 268
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/253 (60%), Positives = 194/253 (76%), Gaps = 5/253 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ LKILE+ML++C Y VTTC A AL++LRE+K +DIV+S
Sbjct: 26 SDQF-PAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLS 84
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDG+KLLEHVGLEMDLPVIMMS DG TS VM+G++HGACDYL+KPIR +EL+NI
Sbjct: 85 DVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNI 144
Query: 130 WQHVFRKKIHEVRDIENIEGFE-SIHMTRSGSDQSVDGPLLTGED--LTSVRKRKDAENR 186
WQHV RKK +E ++ E+ E + R G D + G + L +KR+D+++
Sbjct: 145 WQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRDSKDE 204
Query: 187 HD-DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D + + D S++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVA
Sbjct: 205 DDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 264
Query: 246 SHLQKYRLYLTRL 258
SHLQK+RLYL RL
Sbjct: 265 SHLQKFRLYLKRL 277
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 181/244 (74%), Gaps = 2/244 (0%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD LKILEKML+ C Y VT C A ALS+LRE K+G+DIV+SDV+MP
Sbjct: 34 PAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMP 93
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIMMS D + VMKGV HGACDYL+KP+R++ LRN+WQHV
Sbjct: 94 DMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQHVV 153
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ E +D+E + ++ S+ + S ++R+DAE ++RD D
Sbjct: 154 RKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPEERD--D 211
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVASHLQKYRLY
Sbjct: 212 TSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLY 271
Query: 255 LTRL 258
L RL
Sbjct: 272 LRRL 275
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 188/252 (74%), Gaps = 4/252 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ L++LEKM ++C Y VTTC A AL LLRERK +D+V+S
Sbjct: 31 SDQF-PAGLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 89
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIMMS DG TS VM+G+ HGACDYL+KPIR +EL+NI
Sbjct: 90 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 149
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGED--LTSVRKRKDAENRH 187
WQHV RKK +E ++ E+ FE + G+D + G + L +KR A++
Sbjct: 150 WQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDED 209
Query: 188 D-DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D + + D S+++K RVVWS++LHQ+FV AVN +G DK PK+IL+LMNVP LTRENVAS
Sbjct: 210 DAELENDDPSASRKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVAS 269
Query: 247 HLQKYRLYLTRL 258
HLQK+RLYL RL
Sbjct: 270 HLQKFRLYLKRL 281
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 183/249 (73%), Gaps = 5/249 (2%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE K+GYDIVISD
Sbjct: 27 DQF-PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISD 85
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
V+MPDMDGFKLLEH+GLEMDLPVIMMS D S VMKGV HGACDYL+KP+R++ L+NIW
Sbjct: 86 VHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIW 145
Query: 131 QHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR 190
QHV RKK +E +D+E S+ QS D + + + R K ++ ++
Sbjct: 146 QHVVRKKRNEWKDLEQ---SGSVEEGDRQPKQSEDADYSSSANEGNWRNSKKRKDEEEEG 202
Query: 191 DCGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
D D +ST KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVASHLQ
Sbjct: 203 DERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQ 262
Query: 250 KYRLYLTRL 258
KYRLYL RL
Sbjct: 263 KYRLYLRRL 271
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/291 (55%), Positives = 201/291 (69%), Gaps = 13/291 (4%)
Query: 7 SPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI 66
S DTF P GLRVLVVDDD+ L+ILE+ML+KC Y VTTC A AL+LLRER+ +D+
Sbjct: 13 SEATDTF-PVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGSFDV 71
Query: 67 VISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
V+SDV+MPDMDGFKLLE VGLEMDLP+IMMS DG T+ VM+GVQHGACDYL+KPIR +EL
Sbjct: 72 VLSDVHMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRDEEL 131
Query: 127 RNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS-VDGPLLTGED--LTSVRKRKDA 183
+NIWQHV RKK ++ E + + G+D + ++ G D L +K++DA
Sbjct: 132 KNIWQHVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRVLKPQKKKRDA 191
Query: 184 -ENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
E + + D ++ KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRE
Sbjct: 192 KEEDETEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 251
Query: 243 NVASHLQKYRLYLTRL------QKDELKTSVGGIKQKDSPSKDSAASFGIQ 287
NVASHLQK+RLYL RL Q T G I+Q +P S F IQ
Sbjct: 252 NVASHLQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQ--NPKLGSLGRFDIQ 300
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 189/252 (75%), Gaps = 4/252 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD+ L++LEKML++C Y VTTC A AL LLRERK +D+V+S
Sbjct: 2 SDQF-PAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 60
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIMMS DG TS VM+G+ HGACDYL+KPIR +EL+NI
Sbjct: 61 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 120
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGED--LTSVRKRKDAENRH 187
WQHV RKK +E ++ E+ FE + G+D + G + L +KR A++
Sbjct: 121 WQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDED 180
Query: 188 D-DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D + + D S++KK RVVWS++LHQ+FV AVN +G DK PK+IL+LMNVP LTRENVAS
Sbjct: 181 DAELENDDPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVAS 240
Query: 247 HLQKYRLYLTRL 258
HLQK+RLYL RL
Sbjct: 241 HLQKFRLYLKRL 252
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 190/255 (74%), Gaps = 6/255 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L IL+KML +C+Y+VTTCG+AR AL++LRE K+ +D+V+SDV MP
Sbjct: 15 PAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIMMS +GETS VMKG+ HGACDYLLKPIR+KEL+NIWQHVF
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHVF 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD--DRDC 192
R+K + ++D +G + R D+ P +KRK+ + D + D
Sbjct: 135 RRKRNILKD---ADGADHDRQKRK-PDEGDSMPAAGSAAAAGSKKRKEIKEDDDEFELDM 190
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
D+++ KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNV LTRENVASHLQKYR
Sbjct: 191 DDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVASHLQKYR 250
Query: 253 LYLTRLQKDELKTSV 267
LYL RL + + +V
Sbjct: 251 LYLKRLSVAQQQNAV 265
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/257 (59%), Positives = 190/257 (73%), Gaps = 10/257 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L IL+KML +C+Y+VTTCG+AR AL++LRE K+ +D+V+SDV MP
Sbjct: 15 PAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIMMS +GETS VMKG+ HGACDYLLKPIR+KEL+NIWQHVF
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHVF 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR---- 190
R+K + ++D +G + R D+ P +KRK E + DD
Sbjct: 135 RRKRNILKD---ADGADHDRQKRK-PDEGDSMPAAGSAAAAGSKKRK--EIKEDDEEFEL 188
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D D+++ KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNV LTRENVASHLQK
Sbjct: 189 DMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVASHLQK 248
Query: 251 YRLYLTRLQKDELKTSV 267
YRLYL RL + + +V
Sbjct: 249 YRLYLKRLSVAQQQNAV 265
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 184/251 (73%), Gaps = 18/251 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLRE K+G+DIV+SDV+MP
Sbjct: 26 PAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDVHMP 85
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 86 DMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHVI 145
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGED---LTSVRKRKDAENRH---- 187
RK+ + +RD+E +SGS + D P +D +SV + + ++ R
Sbjct: 146 RKRKNGLRDVE-----------QSGSVEEGDQPPKVSDDGDYSSSVNEARSSKKRRDEDE 194
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
+ + D+S+ KK RVVWS++LHQ+F+ AVNQ+G DK PKKIL+LMNVP LTRENVASH
Sbjct: 195 EGDEKDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVASH 254
Query: 248 LQKYRLYLTRL 258
LQKYRLYL RL
Sbjct: 255 LQKYRLYLRRL 265
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 179/245 (73%), Gaps = 4/245 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE K+G+DIVISDV+MP
Sbjct: 30 PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMP 89
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D S VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 90 DMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ +E +D E E SD++ + + S R K + ++ + D
Sbjct: 150 RKRKNEWKDAEQSGSAEEGDRQPKASDEA---DYSSSANEGSWRNSKKRRDEEEEAEDRD 206
Query: 195 ASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
+ST KK RVVWS++LHQ+FV AV+Q+G DK PKKIL+LMNVP LTRENVASHLQKYRL
Sbjct: 207 DTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266
Query: 254 YLTRL 258
YL RL
Sbjct: 267 YLRRL 271
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 180/244 (73%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLVVDDD LKI+E+M +C Y VTTC A AL+LLRERK +D+V+SDV+MP
Sbjct: 9 PVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMP 68
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDG+KLLEHVGLEMDLPVIMMS D TS VMKG++HGACDYL+KP+R +ELRNIWQHV
Sbjct: 69 DMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVV 128
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK ++ ++ +N E + G+D + + + + +KR + + + D
Sbjct: 129 RKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVKAPKKRSSLKEEDIELESDD 188
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
+++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASHLQK+RLY
Sbjct: 189 PAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLY 248
Query: 255 LTRL 258
L RL
Sbjct: 249 LKRL 252
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 179/245 (73%), Gaps = 4/245 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE K+G+DIVISDV+MP
Sbjct: 30 PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMP 89
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D S VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 90 DMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ +E +D E E SD++ + + S R K + ++ + D
Sbjct: 150 RKRKNEWKDAEQSGSAEEGDRHPKASDEA---DYSSSANEGSWRNSKKRRDEEEEAEDRD 206
Query: 195 ASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
+ST KK RVVWS++LHQ+FV AV+Q+G DK PKKIL+LMNVP LTRENVASHLQKYRL
Sbjct: 207 DTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266
Query: 254 YLTRL 258
YL RL
Sbjct: 267 YLRRL 271
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/250 (57%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VM GV+HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 72 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKPVRMEELKNIWQHVI 131
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK +E +D E+ + R + +D G D + S RK+++ E+ D +
Sbjct: 132 RKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKKREKEDDETDLE 191
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD SST KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 192 NGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 251
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 252 FRLYLKRIAQ 261
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 184/249 (73%), Gaps = 3/249 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 72 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK + +D E+ + R + +D G D + S +K+++ E+ D +
Sbjct: 132 RKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKREKEDDETDLE 191
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
GD S++KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK+
Sbjct: 192 SGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKF 251
Query: 252 RLYLTRLQK 260
RLYL R+ +
Sbjct: 252 RLYLKRIAQ 260
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 205/331 (61%), Gaps = 47/331 (14%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y VTT G A AL +LRE KD +D+VISDV+MP
Sbjct: 19 PVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMP 78
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++L+ IWQHV
Sbjct: 79 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 138
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK----RKDAENRHDD- 189
R+ R +N D S GP GE+ + R R+D + DD
Sbjct: 139 RRNTKN-RGSDN-------------DDASQKGPNAEGENGGANRNKRQSRRDRDENGDDG 184
Query: 190 -------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
D GD+SS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRE
Sbjct: 185 DDSDENSNDNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRE 244
Query: 243 NVASHLQKYRLYLTRLQKD-----ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHND 297
NVASHLQKYRLYL R+ D L ++GG ++ NS+ V H +
Sbjct: 245 NVASHLQKYRLYLKRMSMDASRQANLVAALGGRN----------PAYSNMNSMDVFRHYN 294
Query: 298 VSNGGYR------FSGSNSVVQNVDAKSLEG 322
+ G YR S SN++V +++ S G
Sbjct: 295 NAYGRYRPVPTSTHSQSNNLVARMNSPSAYG 325
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 184/249 (73%), Gaps = 3/249 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 72 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK + +D E+ + R + +D G D + S +K+++ E+ D +
Sbjct: 132 RKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKREKEDDETDLE 191
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
GD S++KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK+
Sbjct: 192 SGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKF 251
Query: 252 RLYLTRLQK 260
RLYL R+ +
Sbjct: 252 RLYLKRIAQ 260
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/254 (60%), Positives = 180/254 (70%), Gaps = 10/254 (3%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
N+ F PAGLRVLVVDDD L+ILEKML C YEVT A ALSLLRE ++G+DIVIS
Sbjct: 26 NNQF-PAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVIS 84
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLEHVGLEMDLPVIMMS D VMKGV HGACDYL+KP+R++ L+NI
Sbjct: 85 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNI 144
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS-----VDGPLLTGEDLTSVRKRKDAE 184
WQHV RKK HE +D + F+ +G Q VD E ++ E
Sbjct: 145 WQHVIRKKKHEWKD----KDFDQSATAEAGDRQQKPPEDVDYSSSANEGGNWKSSKRRKE 200
Query: 185 NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+ + D+SS KK RVVWS++LHQ+FV+AVNQ+G DK PKKIL+LMNVP LTRENV
Sbjct: 201 EEDETEERDDSSSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENV 260
Query: 245 ASHLQKYRLYLTRL 258
ASHLQKYRLYL RL
Sbjct: 261 ASHLQKYRLYLRRL 274
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 196/286 (68%), Gaps = 17/286 (5%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F PAGLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLRE K+G+DIVISD
Sbjct: 27 DQF-PAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISD 85
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
V+MPDMDGFKLLE VGLEMDLPVIMMS D S VMKGV HGACDYL+KP+R++ L+NIW
Sbjct: 86 VHMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGACDYLIKPVRIEALKNIW 145
Query: 131 QHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR 190
QHV RKK +E +D+E E + S+ + + ++RKD E D+R
Sbjct: 146 QHVVRKKKNEWKDVEQSGSVEEGDRQQKPSEDADYSSSANEGTWKNSKRRKDEEEETDER 205
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D +S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 206 DD--SSTLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQK 263
Query: 251 YRLYLTRLQKDELKTSVGGIKQKDSPSKDS-----AASFGIQNSIT 291
YRLYL RL G+ Q + +S ASFG +S++
Sbjct: 264 YRLYLRRLS---------GVSQHQNNLGNSFMSPQEASFGAMSSLS 300
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 186/263 (70%), Gaps = 12/263 (4%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
M S +D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE
Sbjct: 1 MSTASSGGVSDQF-PAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLREN 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
++GYDIVISDV+MPDMDGFKLLE +GLEMDLPVIMMS D + VMKGV HGACDYL+KP
Sbjct: 60 RNGYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKP 119
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSD----QSVDGPLLTGEDLTS 176
IR++ L+NIWQHV RK+ +E +D+E E G D QS D + + S
Sbjct: 120 IRIEALKNIWQHVVRKRKNEWKDLEQSGSVE------EGGDRPQKQSEDADYSSSANEGS 173
Query: 177 VRKRKDAENRHDDRDCGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
+ K ++ ++ D D +ST KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMN
Sbjct: 174 WKNSKRRKDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMN 233
Query: 236 VPWLTRENVASHLQKYRLYLTRL 258
VP LTRENVASHLQKYRLYL RL
Sbjct: 234 VPGLTRENVASHLQKYRLYLRRL 256
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VM G++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 72 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRMEELKNIWQHVI 131
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK +E +D E+ + R + +D G D + S RK+++ E+ D +
Sbjct: 132 RKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKKREKEDDETDLE 191
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD SST KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 192 NGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 251
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 252 FRLYLKRIAQ 261
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/250 (57%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 72 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK +E +D E+ + R + +D G D + S +K+++ E+ D +
Sbjct: 132 RKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKREKEDDETDLE 191
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD SST KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 192 NGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 251
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 252 FRLYLKRIAQ 261
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 179/256 (69%), Gaps = 16/256 (6%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE K+GYDIVIS
Sbjct: 27 SDQF-PAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVIS 85
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE +GLEMDLPVIMMS D + VMKGV HGACDYL+KPIR++ L+NI
Sbjct: 86 DVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNI 145
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH-- 187
WQHV RK+ +E RD+E E G D+ P D +S +N
Sbjct: 146 WQHVVRKRKNEWRDLEQSGSVE------EGGDRQQKQP--EDADYSSSANEGSWKNSKRR 197
Query: 188 -----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
+ + D S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRE
Sbjct: 198 KDEEEETEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRE 257
Query: 243 NVASHLQKYRLYLTRL 258
NVASHLQKYRLYL R+
Sbjct: 258 NVASHLQKYRLYLRRV 273
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/246 (57%), Positives = 181/246 (73%), Gaps = 2/246 (0%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLVVDDD LKI+E+M +C Y VTTC A AL+LLRERK +D+V+SDV+MP
Sbjct: 11 PVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMP 70
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDG+KLLEHVGLEMDLPVIMMS D TS VMKG++HGACDYL+KP+R +ELRNIWQHV
Sbjct: 71 DMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVV 130
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQS--VDGPLLTGEDLTSVRKRKDAENRHDDRDC 192
RK ++ ++++N E + G+D + E + + +KR + + +
Sbjct: 131 RKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKEEDIELES 190
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
D +++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASHLQK+R
Sbjct: 191 DDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFR 250
Query: 253 LYLTRL 258
LYL RL
Sbjct: 251 LYLKRL 256
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 179/256 (69%), Gaps = 16/256 (6%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE K+GYDIVIS
Sbjct: 27 SDQF-PAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVIS 85
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE +GLEMDLPVIMMS D + VMKGV HGACDYL+KPIR++ L+NI
Sbjct: 86 DVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNI 145
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH-- 187
WQHV RK+ +E +D+E E G D+ P D +S +N
Sbjct: 146 WQHVVRKRKNEWKDLEQSGSVE------EGGDRQQKQP--EDADYSSSANEGSWKNSKRR 197
Query: 188 -----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
+ + D S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRE
Sbjct: 198 KDEEEEAEERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRE 257
Query: 243 NVASHLQKYRLYLTRL 258
NVASHLQKYRLYL RL
Sbjct: 258 NVASHLQKYRLYLRRL 273
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 177/244 (72%), Gaps = 4/244 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLRE K+G+DIV+SDV+MP
Sbjct: 26 PAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMP 85
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 86 DMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 145
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R + + +RD+E E GSD DG + + + +K + + + D
Sbjct: 146 RMRKNGLRDVEQSGSMEEGDRPPKGSD---DGNYSSSVN-EAKSSKKRRDEDEEGDERDD 201
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
+S+ KK RVVWS++LHQ+F+ VNQ+G DK PKKIL+LMNVP LTRENVASHLQKYRLY
Sbjct: 202 SSTLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLY 261
Query: 255 LTRL 258
L RL
Sbjct: 262 LRRL 265
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/266 (57%), Positives = 182/266 (68%), Gaps = 22/266 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVL VDDD L+IL +ML+KCSYEVT C A +ALSLLRE KD +D++ISDV MP
Sbjct: 21 PAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE+VGLEMDLPVIM S +GET VMKGV HGACDYL+KP+R +ELRNIWQHV
Sbjct: 81 DMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHVV 140
Query: 135 RKKIHEVRDIENIEGFE-----------------SIHMTRSGS-----DQSVDGPLLTGE 172
RKK +E RD+E E S R S + + DG
Sbjct: 141 RKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGGDP 200
Query: 173 DLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILD 232
+ ++RKD + + D D+S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+
Sbjct: 201 NWKLAKRRKDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKAVPKKILE 260
Query: 233 LMNVPWLTRENVASHLQKYRLYLTRL 258
M+V LTRENVASHLQKYRLYL RL
Sbjct: 261 SMSVHGLTRENVASHLQKYRLYLRRL 286
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/257 (59%), Positives = 178/257 (69%), Gaps = 21/257 (8%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLR K G+DIVISD
Sbjct: 27 DQF-PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISD 85
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
V+MPDMDGFKLLEH+GLEMDLPVIMMS D VMKGV HGACDYL+KP+R++ L+NIW
Sbjct: 86 VHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIW 145
Query: 131 QHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR 190
QHV RK+ +E +D+E +SGS + D ED+ + ++ R
Sbjct: 146 QHVVRKRKNEWKDLE-----------QSGSVEDGDRQQKPSEDVDYSSSANEGNWKNSKR 194
Query: 191 ---------DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
+ D S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTR
Sbjct: 195 RKDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTR 254
Query: 242 ENVASHLQKYRLYLTRL 258
ENVASHLQKYRLYL RL
Sbjct: 255 ENVASHLQKYRLYLRRL 271
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/275 (55%), Positives = 190/275 (69%), Gaps = 16/275 (5%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R D F P G+RVL VDDD LK+LE +L +C Y VTT A AL +LRE +D +D+VI
Sbjct: 16 RRDQF-PVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVI 74
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV+MPDMDGFKLLE VGLEMDLPVIM+SV+GET V+KG+ HGACDYLLKP+R++ELRN
Sbjct: 75 SDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRN 134
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVR---KRKDAEN 185
IWQHV R+K RD N++ +E + + V G + G S R KRK+ +
Sbjct: 135 IWQHVIRRKF-STRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCS 193
Query: 186 RHDD------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
+D +D D S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV L
Sbjct: 194 EEEDEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKL 253
Query: 240 TRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
TRENVASHLQKYRLYL RL Q+ + ++GG
Sbjct: 254 TRENVASHLQKYRLYLKRLSAVASQQVSIVAALGG 288
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/275 (55%), Positives = 190/275 (69%), Gaps = 16/275 (5%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R D F P G+RVL VDDD LK+LE +L +C Y VTT A AL +LRE +D +D+VI
Sbjct: 16 RRDQF-PVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVI 74
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV+MPDMDGFKLLE VGLEMDLPVIM+SV+GET V+KG+ HGACDYLLKP+R++ELRN
Sbjct: 75 SDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRN 134
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVR---KRKDAEN 185
IWQHV R+K RD N++ +E + + V G + G S R KRK+ +
Sbjct: 135 IWQHVIRRKF-STRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCS 193
Query: 186 RHDD------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
+D +D D S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV L
Sbjct: 194 EEEDEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKL 253
Query: 240 TRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
TRENVASHLQKYRLYL RL Q+ + ++GG
Sbjct: 254 TRENVASHLQKYRLYLKRLSAVASQQVSIVAALGG 288
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 190/290 (65%), Gaps = 27/290 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L +C Y VTT G A AL LLRE KD +D+VISDV+MP
Sbjct: 26 PVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMP 85
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LR IWQHV
Sbjct: 86 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVI 145
Query: 135 RKKIHEVRDIENIE--GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD- 191
R+K + ++ N + G ++ M G G + + RK + DD D
Sbjct: 146 RRKNCDAKNRGNDDDAGQKAQGMNNEGES--------IGANRNKRQSRKSRDENGDDGDD 197
Query: 192 -------CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
GD+S+ KK RVVWS++LH+KFV AVNQ+G +K PKKILDLMNV +TRENV
Sbjct: 198 SDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENV 257
Query: 245 ASHLQKYRLYLTRLQKD-----ELKTSVGGIKQKDSPSKDSAASFGIQNS 289
ASHLQKYRLYL RL D L + GG +P+ + SFG N+
Sbjct: 258 ASHLQKYRLYLKRLSTDASRQANLAAAFGG----RNPAYINMNSFGNYNA 303
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 186/263 (70%), Gaps = 12/263 (4%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
M S +D F PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLRE
Sbjct: 11 MSTASSGGVSDQF-PAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLREN 69
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
++GYDIVISDV+MPDMDGFKLLE +GLEMDLPVIMMS D + VMKGV HGACDYL+KP
Sbjct: 70 RNGYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKP 129
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSD----QSVDGPLLTGEDLTS 176
IR++ L+NIWQHV RK+ +E +D+E E G D QS D + + S
Sbjct: 130 IRIEALKNIWQHVVRKRKNEWKDLEQSGSVE------EGGDRQQKQSEDADYSSSANEGS 183
Query: 177 VRKRKDAENRHDDRDCGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
+ K ++ ++ D D +ST KK RVVWS++LHQ+FV AV+Q+G DK PKKIL+LMN
Sbjct: 184 WKNSKRRKDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILELMN 243
Query: 236 VPWLTRENVASHLQKYRLYLTRL 258
VP LTRENVASHLQKYRLYL RL
Sbjct: 244 VPGLTRENVASHLQKYRLYLRRL 266
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 190/290 (65%), Gaps = 27/290 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L +C Y VTT G A AL LLRE KD +D+VISDV+MP
Sbjct: 26 PVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMP 85
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LR IWQHV
Sbjct: 86 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVI 145
Query: 135 RKKIHEVRDIENIE--GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD- 191
R+K + ++ N + G ++ M G G + + RK + DD D
Sbjct: 146 RRKNCDAKNRGNDDDAGQKAQGMNNEGES--------IGANRNKRQSRKSRDENGDDGDD 197
Query: 192 -------CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
GD+S+ KK RVVWS++LH+KFV AVNQ+G +K PKKILDLMNV +TRENV
Sbjct: 198 SDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENV 257
Query: 245 ASHLQKYRLYLTRLQKD-----ELKTSVGGIKQKDSPSKDSAASFGIQNS 289
ASHLQKYRLYL RL D L + GG +P+ + SFG N+
Sbjct: 258 ASHLQKYRLYLKRLSTDASRQANLAAAFGG----RNPAYINMNSFGNYNA 303
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 232/391 (59%), Gaps = 49/391 (12%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L +C Y VTT G A AL +LRE KD +D+VISDV+MP
Sbjct: 18 PVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDVHMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++L+ IWQHV
Sbjct: 78 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVV 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDC-- 192
R+ + R +N + + + Q+ DG G + + R+D EN D D
Sbjct: 138 RRNT-KTRGNDNDDAGQKV--------QNGDGE-NGGANRNKRQSRRD-ENGDDGDDSDE 186
Query: 193 -----GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
DASS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRENVASH
Sbjct: 187 NSNENADASSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASH 246
Query: 248 LQKYRLYLTRLQKD-----ELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGG 302
LQKYRLYL R+ D L ++GG ++G NS+ V H + + G
Sbjct: 247 LQKYRLYLKRMSMDASRQANLVAALGGRN----------PAYGNMNSLDVFRHYNNAYGR 296
Query: 303 Y------RFSGSNSVVQNVDAKSLEGDVKGIDTIPVT-GHKR------VLTVDIPNSHKA 349
Y S SN++V +++ S G + + P+ GH + + + + N +
Sbjct: 297 YPPVPTTTHSQSNNLVARMNSPSAFGMHGLLSSQPLQHGHAQTNMGTSLNDLGVNNGNMI 356
Query: 350 RCSQIGFNGSFVPGHSDVNFTSFDSAIPTQP 380
R +Q+ + V G S +FT+ + P P
Sbjct: 357 RAAQM---PTMVTGTSCNSFTNISNGAPLAP 384
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/266 (57%), Positives = 182/266 (68%), Gaps = 22/266 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVL VDDD L+IL +ML+KCSYEVT C A +ALSLLRE KD +D++ISDV MP
Sbjct: 11 PAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMP 70
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE+VGLEMDLPVIM S +GET VMKGV HGACDYL+KP+R +ELRNIWQHV
Sbjct: 71 DMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHVV 130
Query: 135 RKKIHEVRDIENIEGFE-----------------SIHMTRSGS-----DQSVDGPLLTGE 172
RKK +E RD+E E S R S + + DG
Sbjct: 131 RKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGGDP 190
Query: 173 DLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILD 232
+ ++RKD + + D D+S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+
Sbjct: 191 NWKLAKRRKDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKAVPKKILE 250
Query: 233 LMNVPWLTRENVASHLQKYRLYLTRL 258
M+V LTRENVASHLQKYRLYL RL
Sbjct: 251 SMSVHGLTRENVASHLQKYRLYLRRL 276
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/250 (55%), Positives = 181/250 (72%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+ TTC + ALS+LRE + G+D++ISDV+MP
Sbjct: 13 PVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVHMP 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 73 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 132
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGED--LTSVRKRKDAENRHDDRD 191
RKK ++ E+ + R + +D + G D S +K++D E + +
Sbjct: 133 RKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDGADDSWKSQKKKRDKEEDDSELE 192
Query: 192 CGDAS-STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD S S+KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 193 SGDPSNSSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 252
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 253 FRLYLKRIAQ 262
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 176/253 (69%), Gaps = 20/253 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILEKML+ C YEVT C A ALSLLR K G+DIVISDV+MP
Sbjct: 30 PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMP 89
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 90 DMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR---- 190
RK+ +E +D+E +SGS + D ED+ + ++ R
Sbjct: 150 RKRKNEWKDLE-----------QSGSVEDGDRQQKPSEDVDYSSSANEGNWKNSKRRKDE 198
Query: 191 -----DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
+ D S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVA
Sbjct: 199 EDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVA 258
Query: 246 SHLQKYRLYLTRL 258
SHLQKYRLYL RL
Sbjct: 259 SHLQKYRLYLRRL 271
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/245 (59%), Positives = 181/245 (73%), Gaps = 6/245 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLRE K+G+DIV+SDV+MP
Sbjct: 30 PAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMP 89
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D + VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 90 DMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 135 RKKIHEVRDIENIEGF-ESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
RK+ + +D+ G E ++ +D + T E +S ++R + + D DC
Sbjct: 150 RKRKNSWKDLRQSGGLDERDREKKASTDANYSSS--TNEGKSSKKRRDEEDEADDRDDC- 206
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
S++KK RVVWSI+LHQ+F+ VNQ+G DK PKKI+++MNVP LTRENVASHLQKYRL
Sbjct: 207 --STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRL 264
Query: 254 YLTRL 258
YL RL
Sbjct: 265 YLRRL 269
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 194/295 (65%), Gaps = 34/295 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 34 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 93
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 135 RKKIHEVRDIENIEGFESI-------------HMTRSGSDQSVD---GPLLTGEDL-TSV 177
RK+ E E+ E SG + +VD + G + +S
Sbjct: 154 RKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSS 213
Query: 178 RKRKD--AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
RKRKD E + DD+D DAS+ KK RVVWS++LHQ+FV AVNQ+G +K PKKIL+LMN
Sbjct: 214 RKRKDEEGEEQGDDKDE-DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMN 272
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA-----ASFG 285
VP LTRENVASHLQKYR+YL RL GG+ Q +S ASFG
Sbjct: 273 VPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTGQDASFG 318
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 194/295 (65%), Gaps = 34/295 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 34 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 93
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 135 RKKIHEVRDIENIEGFESI-------------HMTRSGSDQSVD---GPLLTGEDL-TSV 177
RK+ E E+ E SG + +VD + G + +S
Sbjct: 154 RKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSS 213
Query: 178 RKRKD--AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
RKRKD E + DD+D DAS+ KK RVVWS++LHQ+FV AVNQ+G +K PKKIL+LMN
Sbjct: 214 RKRKDEEGEEQGDDKDE-DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMN 272
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA-----ASFG 285
VP LTRENVASHLQKYR+YL RL GG+ Q +S ASFG
Sbjct: 273 VPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTGQDASFG 318
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 194/295 (65%), Gaps = 34/295 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 34 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 93
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 135 RKKIHEVRDIENIEGFESI-------------HMTRSGSDQSVD---GPLLTGEDL-TSV 177
RK+ E E+ E SG + +VD + G + +S
Sbjct: 154 RKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSS 213
Query: 178 RKRKD--AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
RKRKD E + DD+D DAS+ KK RVVWS++LHQ+FV AVNQ+G +K PKKIL+LMN
Sbjct: 214 RKRKDEEGEEQGDDKDE-DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMN 272
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA-----ASFG 285
VP LTRENVASHLQKYR+YL RL GG+ Q +S ASFG
Sbjct: 273 VPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTGQDASFG 318
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 194/295 (65%), Gaps = 34/295 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 34 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 93
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 135 RKKIHEVRDIENIEGFESI-------------HMTRSGSDQSVD---GPLLTGEDL-TSV 177
RK+ E E+ E SG + +VD + G + +S
Sbjct: 154 RKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSS 213
Query: 178 RKRKD--AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
RKRKD E + DD+D DAS+ KK RVVWS++LHQ+FV AVNQ+G +K PKKIL+LMN
Sbjct: 214 RKRKDEEGEEQGDDKDE-DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMN 272
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA-----ASFG 285
VP LTRENVASHLQKYR+YL RL GG+ Q +S ASFG
Sbjct: 273 VPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTGQDASFG 318
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 200/300 (66%), Gaps = 27/300 (9%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F+P GL+VLVVDDD L +LE+ML++C Y VTTC A AL++LRERK+ +D+VISD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
V+MPDMDGFKLLE +GLEM +PVIMMS GET VMKGV +GACDYL+KP+R++ELRNIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 131 QHVFRKKIHE--VRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRK----DAE 184
QHV R++ + VRD E E +E M + +D S + + DL +RK+K D
Sbjct: 122 QHVVRRRTKDSAVRD-EAPEEWEDF-MRSTPTDSSEEADV----DLRLLRKKKRPSCDFG 175
Query: 185 NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
D +S KKARVVWS DLHQ+FVKA+N IG +K PK+IL++MN+ LTRENV
Sbjct: 176 GGGGDESVRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENV 235
Query: 245 ASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKD----SAASFGIQNSITVHHHNDVSN 300
ASHLQKYRLYL RL G+ + P A+FG ++ +HHH S+
Sbjct: 236 ASHLQKYRLYLKRL---------SGVTPEPFPIASFQAYEGATFG--GTMQIHHHQRSSS 284
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/265 (57%), Positives = 178/265 (67%), Gaps = 17/265 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA LRVLVVDDD L ILE+ML C Y VT C A ALSLLR+ K+G+DIVISDV+MP
Sbjct: 25 PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMP 84
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+R++ L+NIWQHV
Sbjct: 85 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 135 RKKI-------HEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH 187
RKK H IE+ G + + D + + + S RKRK+ E
Sbjct: 145 RKKRNDWNVSEHSGGSIEDTGG-DRDRQQQQREDADNNSSSINEGNWRSSRKRKEEEVDE 203
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
D D SS KK RVVWS++LHQ+FV AVNQ+G DK PKKIL++MNVP LTRENVASH
Sbjct: 204 QGDDKEDTSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASH 263
Query: 248 LQKYRLYLTRLQKDELKTSVGGIKQ 272
LQKYR+YL RL GG+ Q
Sbjct: 264 LQKYRIYLRRL---------GGVSQ 279
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 177/252 (70%), Gaps = 10/252 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA LRVLVVDDD L ILE+ML C Y VT C A ALSLLR+ K+G+DIVISDV+MP
Sbjct: 25 PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMP 84
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+R++ L+NIWQHV
Sbjct: 85 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV--------RKRKDAENR 186
RKK +E E+ G SI T D+ + +SV RKRK+ E
Sbjct: 145 RKKRNEWNVSEHSGG--SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVD 202
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D D+SS KK RVVWS++LHQ+FV AVNQ+G DK PKKIL++MNVP LTRENVAS
Sbjct: 203 DQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVAS 262
Query: 247 HLQKYRLYLTRL 258
HLQKYR+YL RL
Sbjct: 263 HLQKYRIYLRRL 274
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/300 (52%), Positives = 200/300 (66%), Gaps = 27/300 (9%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F+P GL+VLVVDDD L +LE+ML++C Y VTTC A AL++LRERK+ +D+VISD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
V+MPDMDGFKLLE +GLEM +PVIMMS GET VMKGV +GACDYL+KP+R++ELRNIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 131 QHVFRKKIHE--VRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRK----DAE 184
QHV R++ + VRD E E +E M + +D S + + DL +RK+K D
Sbjct: 122 QHVVRRRTKDSAVRD-EAPEEWEDF-MRSTPTDSSEEADV----DLRLLRKKKRPSCDFG 175
Query: 185 NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
D +S KKARVVWS DLHQ+FVKA+N IG +K PK+IL++MN+ LTRENV
Sbjct: 176 GGGGDESMRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENV 235
Query: 245 ASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKD----SAASFGIQNSITVHHHNDVSN 300
ASHLQKYRLYL RL G+ + P A+FG ++ +HHH S+
Sbjct: 236 ASHLQKYRLYLKRL---------SGVTPEPFPIASFQAYEGATFG--GTMQIHHHQRSSS 284
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 194/291 (66%), Gaps = 15/291 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+L+ +L+KC Y V+T AR AL +LRE KD +D+VISDV+MP
Sbjct: 17 PVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDVHMP 76
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLL+ VGLEMDLPVIM+S + + VMKGV HGACDYL+KP+R++ELRNIWQHV
Sbjct: 77 DMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQHVI 136
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDL-----TSVRKRKDAENRHDD 189
R++ R+ + SG + G + GE+ T++RKRKD E+ +D
Sbjct: 137 RRRKSVTRNENKSADQAKPNQIASGEGGQLGG-TIPGENADQNGKTNIRKRKDEEDESED 195
Query: 190 -RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
+ D ++ KK RVVWSI+LH+KFV AVNQ+G +K PK+ILDLMNV LTRENVASHL
Sbjct: 196 GNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHL 255
Query: 249 QKYRLYLTRL-----QKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHH 294
QKYRLYL R+ Q+ + + G KDSP G+ N+ H+
Sbjct: 256 QKYRLYLKRISTVATQQANMAAAFG---VKDSPFMRMGPFGGLPNAAFPHY 303
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 177/252 (70%), Gaps = 10/252 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA LRVLVVDDD L ILE+ML C Y VT C A ALSLLR+ K+G+DIVISDV+MP
Sbjct: 25 PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMP 84
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+R++ L+NIWQHV
Sbjct: 85 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV--------RKRKDAENR 186
RKK +E E+ G SI T D+ + +SV RKRK+ E
Sbjct: 145 RKKRNEWNVSEHSGG--SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVD 202
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D D+SS KK RVVWS++LHQ+FV AVNQ+G DK PKKIL++MNVP LTRENVAS
Sbjct: 203 DQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVAS 262
Query: 247 HLQKYRLYLTRL 258
HLQKYR+YL RL
Sbjct: 263 HLQKYRIYLRRL 274
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/253 (58%), Positives = 179/253 (70%), Gaps = 9/253 (3%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F PAGLRVLVVDDD L+ILEKMLK C YEVT C A AL LLR+ ++GYDIVIS
Sbjct: 29 SDQF-PAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGYDIVIS 87
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIMMS D + VMKGV HGACDYL+KP+R++ L+NI
Sbjct: 88 DVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNI 147
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENR--- 186
WQHV RK HE ++ + +E G Q + + K+++ R
Sbjct: 148 WQHVVRKGKHEWKEKD----YEQSGSVEDGERQQKPNEDVDYSSSANEGNWKNSKKRKDD 203
Query: 187 -HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D + D+S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LMNVP LTRENVA
Sbjct: 204 EEDQEEKDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVA 263
Query: 246 SHLQKYRLYLTRL 258
SHLQKYRLYL R+
Sbjct: 264 SHLQKYRLYLRRV 276
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 183/270 (67%), Gaps = 16/270 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y VTT A ALS+LR+ +D +D+VISDV+MP
Sbjct: 18 PVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVISDVHMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 78 DMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQHVV 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH------- 187
R+K D N +G+E + + + G S R K + H
Sbjct: 138 RRKFSNC-DRANNDGYEECNRPSNADFDLAHSQITAGPPDQSGRPSKKRKEYHSEEEDEG 196
Query: 188 ---DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+ +D D S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV LTRENV
Sbjct: 197 EESNGQDNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLTRENV 256
Query: 245 ASHLQKYRLYLTRL-----QKDELKTSVGG 269
ASHLQKYRLYL RL Q+ + ++GG
Sbjct: 257 ASHLQKYRLYLKRLSAVASQQASIVAALGG 286
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 180/245 (73%), Gaps = 6/245 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLRE K+G+DIV+SDV+MP
Sbjct: 30 PAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMP 89
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+GLEMDLPVIMMS D + VMKGV HGACDYL+KP+R++ L+NIWQHV
Sbjct: 90 DMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 135 RKKIHEVRDIENIEGF-ESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
RK+ + +D+ G E ++ +D + T E +S ++R + + D DC
Sbjct: 150 RKRKNSWKDLRQSGGLDERDREKKASTDANYSSS--TNEGKSSKKRRDEEDEADDRDDC- 206
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
S++KK RVVWSI+LHQ+F+ VNQ+G DK PKKI+++MNVP LTRENVAS LQKYRL
Sbjct: 207 --STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASRLQKYRL 264
Query: 254 YLTRL 258
YL RL
Sbjct: 265 YLRRL 269
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 182/270 (67%), Gaps = 16/270 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y VTT A AL +LR+ +D +D+VISDV+MP
Sbjct: 18 PVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVISDVHMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 78 DMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQHVV 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH------- 187
R+K + NI+G+E + V + G S R K + H
Sbjct: 138 RRKFSNC-ERANIDGYEECTRPSNADFDHVHSQITGGTPDQSGRSSKKRKEYHSEEEDEG 196
Query: 188 ---DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+ ++ D S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV LTRENV
Sbjct: 197 EESNGQENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVERLTRENV 256
Query: 245 ASHLQKYRLYLTRL-----QKDELKTSVGG 269
ASHLQKYRLYL RL Q+ + + GG
Sbjct: 257 ASHLQKYRLYLKRLSAVASQQASIVAAFGG 286
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 176/252 (69%), Gaps = 10/252 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA LRVLVVD D L ILE+ML C Y VT C A ALSLLR+ K+G+DIVISDV+MP
Sbjct: 25 PANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMP 84
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+R++ L+NIWQHV
Sbjct: 85 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV--------RKRKDAENR 186
RKK +E E+ G SI T D+ + +SV RKRK+ E
Sbjct: 145 RKKRNEWNVSEHSGG--SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVD 202
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D D+SS KK RVVWS++LHQ+FV AVNQ+G DK PKKIL++MNVP LTRENVAS
Sbjct: 203 DQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVAS 262
Query: 247 HLQKYRLYLTRL 258
HLQKYR+YL RL
Sbjct: 263 HLQKYRIYLRRL 274
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/261 (54%), Positives = 181/261 (69%), Gaps = 6/261 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L+KC Y VTT A +AL++LRE ++ +D+VISDVNMP
Sbjct: 16 PVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMP 75
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D+DGFKLLE VGLEMDLPVIM+S G+T VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 76 DIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVV 135
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R+K + RD E G Q + ++ +KRKD + ++ +
Sbjct: 136 RRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSDEEEEGGEEN 195
Query: 195 A-----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
S+ KKARVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 196 EDDEDPSAQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQ 255
Query: 250 KYRLYLTR-LQKDELKTSVGG 269
KYRLYL + Q+ + ++GG
Sbjct: 256 KYRLYLKKAAQQANMVAALGG 276
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 184/275 (66%), Gaps = 9/275 (3%)
Query: 3 NGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
NG D F P G+RVL VDDD LK+LEK+L+ C Y VTT G A AL LLRE+KD
Sbjct: 14 NGGGHGAKDQF-PVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKD 72
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
+D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R
Sbjct: 73 QFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVR 132
Query: 123 MKELRNIWQHVFRKKIHEVRDIEN---IEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
+++LR IWQHV R++ + ++ N G + ++ G + + T
Sbjct: 133 IEQLRTIWQHVVRRRSCDAKNNGNDNDDSGKKLQVVSAEGDNGGGNRNKRTSRRGRDDNG 192
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
++ + + GD+S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +
Sbjct: 193 DDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENI 252
Query: 240 TRENVASHLQKYRLYLTRLQKD-----ELKTSVGG 269
TRENVASHLQKYRLYL RL D L + GG
Sbjct: 253 TRENVASHLQKYRLYLKRLSADASRQANLTAAFGG 287
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 194/295 (65%), Gaps = 35/295 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 32 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 91
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 92 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 151
Query: 135 RKKIHEVRDIENIEGFESI-------------HMTRSGSDQSVD---GPLLTGEDL-TSV 177
RK+ E E+ E SG + +VD + G + +S
Sbjct: 152 RKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSS 211
Query: 178 RKRKD--AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
RKRKD E + DD+D DAS+ KK RVVWS++LHQ+FV AVNQ+G + V PKKIL+LMN
Sbjct: 212 RKRKDEEGEEQGDDKD-EDASNLKKPRVVWSVELHQQFVAAVNQLGAEAV-PKKILELMN 269
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA-----ASFG 285
VP LTRENVASHLQKYR+YL RL GG+ Q +S ASFG
Sbjct: 270 VPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTGQDASFG 315
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 183/270 (67%), Gaps = 16/270 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y VTT A AL +LRE +D YD+VISDV+MP
Sbjct: 17 PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDVHMP 76
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 77 DMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHVV 136
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDD----- 189
R+K + R+ N++ ++ + S + G S R K + H D
Sbjct: 137 RRKFSK-RERSNLDIYKDFNKLPSADPCHGHNQITAGASDQSGRISKKRKEMHSDEEDDG 195
Query: 190 -----RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
++ + S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV LTRENV
Sbjct: 196 EENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENV 255
Query: 245 ASHLQKYRLYLTRL-----QKDELKTSVGG 269
ASHLQKYRLYL RL Q+ + + GG
Sbjct: 256 ASHLQKYRLYLKRLSAVASQQASIVAAFGG 285
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 179/250 (71%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+ TTC A AL++LRE + +D++ISDV+MP
Sbjct: 14 PVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDVHMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 74 DMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQHVV 133
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGED--LTSVRKRKDAENRHDDRD 191
RKK ++ E+ + R + +D G + S +K++D E + +
Sbjct: 134 RKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSANDGAEDSWKSQKKKRDKEEDDSELE 193
Query: 192 CGDAS-STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD S ++KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 194 SGDPSNNSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 253
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 254 FRLYLKRIAQ 263
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 185/275 (67%), Gaps = 22/275 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y V T A AL LLRE +D +D+VISDV+MP
Sbjct: 25 PVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDVHMP 84
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 85 DMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHVV 144
Query: 135 RKKIHE--------VRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENR 186
R+K + +D + G + H G Q+ G + + RKRK+ +
Sbjct: 145 RRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTAGA--SDQSGRIGRKRKEMHSD 202
Query: 187 HDD-------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
+D ++ + S+ KK RVVWSI+LH+KFV AVNQ+G DK PK+IL+LMNV L
Sbjct: 203 EEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKL 262
Query: 240 TRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
TRENVASHLQKYRLYL RL Q+ + + GG
Sbjct: 263 TRENVASHLQKYRLYLKRLSAVASQQASIVAAFGG 297
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/252 (56%), Positives = 177/252 (70%), Gaps = 11/252 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L+KC Y VTT + +AL +LRE ++ +D+VISDVNMP
Sbjct: 21 PVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLVISDVNMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +T VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 81 DMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHVI 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDG--PLLTGEDLTSVRKRK------DAENR 186
R+K E + F S + ++G ++ G P + RKRK D E +
Sbjct: 141 RRKKLEPKAKNK---FPSQNKVQNGGNEVEQGFSPTSNADSAKFNRKRKDQDDDDDDEGK 197
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
+ D D S+ KK RVVWS++LH+KFV AVNQ+G +K PKKILDLMNV LTRENVAS
Sbjct: 198 ENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVEGLTRENVAS 257
Query: 247 HLQKYRLYLTRL 258
HLQKYRLYL R+
Sbjct: 258 HLQKYRLYLKRI 269
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+ TTC A AL++LRE + G+D++ISDV+MP
Sbjct: 13 PVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMP 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 73 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVI 132
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK +E ++ E+ + TR + +D G + + S +K++D ++ + +
Sbjct: 133 RKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELE 192
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD SST KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 193 SGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 252
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 253 FRLYLKRIAQ 262
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/250 (56%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+ TTC A AL++LRE + G+D++ISDV+MP
Sbjct: 13 PVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMP 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS D T VMKG++HGACDYL+KP+RM+EL+NIWQHV
Sbjct: 73 DMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVI 132
Query: 135 RKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGEDLT--SVRKRKDAENRHDDRD 191
RKK +E ++ E+ + TR + +D G + + S +K++D ++ + +
Sbjct: 133 RKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELE 192
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD SST KK RVVWS++LHQ+FV AVN +G DK PKKIL+LMNVP LTRENVASHLQK
Sbjct: 193 SGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQK 252
Query: 251 YRLYLTRLQK 260
+RLYL R+ +
Sbjct: 253 FRLYLKRIAQ 262
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 179/263 (68%), Gaps = 8/263 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L +C Y VTT G A AL LLRE+KD +D+VISDV+MP
Sbjct: 23 PVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMP 82
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LR IWQHV
Sbjct: 83 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHVV 142
Query: 135 RKKIHEVRDIEN---IEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
R++ + ++ N G + ++ G + V+ ++ + +
Sbjct: 143 RRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDDSDDNSNE 202
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
GD+SS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRENVASHLQKY
Sbjct: 203 NGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQKY 262
Query: 252 RLYLTRLQKD-----ELKTSVGG 269
RLYL RL D L + GG
Sbjct: 263 RLYLKRLSADASRQANLTAAFGG 285
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 178/249 (71%), Gaps = 13/249 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L ILE +L++C Y VTT A AL LLRE K+ +D+VISDV+MP
Sbjct: 15 PTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAE-NRHDDRDCG 193
R+K + +D N S + R S+ + G+ +KRKD N DD+D G
Sbjct: 135 RRKKFDPKDRMN-----SGNQDRPDSENGEESADPNGK---FNKKRKDQNYNEDDDQDYG 186
Query: 194 ----DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
D+S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 187 QDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 246
Query: 250 KYRLYLTRL 258
KYRLYL R+
Sbjct: 247 KYRLYLKRI 255
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 185/270 (68%), Gaps = 16/270 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L++C Y VT A AL +LRE +D +D+VISDV+MP
Sbjct: 21 PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMFDLVISDVHMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 81 DMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELKNIWQHVV 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVR---KRKDAENRHDD-- 189
R+K RD N + +E + S + + G + S R KRK+ + +D
Sbjct: 141 RRKF-STRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQSGRPNKKRKEYHSEEEDED 199
Query: 190 -----RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+D D S+ K+ RVVWS++LH+KFV AVN +G DK PK+IL+LMNV LTRENV
Sbjct: 200 GDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKAVPKRILELMNVEKLTRENV 259
Query: 245 ASHLQKYRLYLTRL-----QKDELKTSVGG 269
ASHLQKYR+YL RL Q+ + ++GG
Sbjct: 260 ASHLQKYRVYLRRLSAVASQQAGIVAALGG 289
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/256 (57%), Positives = 180/256 (70%), Gaps = 6/256 (2%)
Query: 9 RNDTFN--PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI 66
RND+ + P G+RVL VDDD L +L+ +L++C Y VTT A AL+LLRE KD +D+
Sbjct: 7 RNDSGDEFPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDL 66
Query: 67 VISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +G+T VMKG+ HGACDYLLKP+RM+EL
Sbjct: 67 VISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGACDYLLKPVRMEEL 126
Query: 127 RNIWQHVFRKKIHEVRDIENIEGFES-IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAEN 185
+NIWQHV R+K + ++ + + +G S G E LT RK +D +
Sbjct: 127 KNIWQHVIRRKKFDSKEKNKTSNLDKPTSNSGNGLGSSGTGNSDQNEKLTKKRKDQDEDE 186
Query: 186 RHDDRDCG---DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
D + D S+ KK RVVWS+DLH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 187 DEDQENDLDNEDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRE 246
Query: 243 NVASHLQKYRLYLTRL 258
NVASHLQKYRLYL R+
Sbjct: 247 NVASHLQKYRLYLKRI 262
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 179/263 (68%), Gaps = 8/263 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L +C Y VTT G A AL LLRE+KD +D+VISDV+MP
Sbjct: 23 PVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMP 82
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LR IWQHV
Sbjct: 83 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHVV 142
Query: 135 RKKIHEVRDIEN---IEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
R++ + ++ N G + ++ G + V+ ++ + +
Sbjct: 143 RRRSCDAKNSGNDNDDSGKKLQVVSAEGDNGGVNRNKRISRKGRDDNGDDGDDSDDNSNE 202
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
GD+SS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRENVASHLQKY
Sbjct: 203 NGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQKY 262
Query: 252 RLYLTRLQKD-----ELKTSVGG 269
RLYL RL D L + GG
Sbjct: 263 RLYLKRLSADASRQANLTAAFGG 285
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 179/263 (68%), Gaps = 8/263 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L +C Y VTT G A AL LLRE+KD +D+VISDV+MP
Sbjct: 23 PVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMP 82
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+++LR IWQHV
Sbjct: 83 DMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHVV 142
Query: 135 RKKIHEVRDIEN---IEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
R++ + ++ N G + ++ G + V+ ++ + +
Sbjct: 143 RRRSCDAKNSGNDNDDSGKKLQVVSVEGDNGGVNRNKRISRKGRDDNGDDGDDSDDNSNE 202
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
GD+SS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRENVASHLQKY
Sbjct: 203 NGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQKY 262
Query: 252 RLYLTRLQKD-----ELKTSVGG 269
RLYL RL D L + GG
Sbjct: 263 RLYLKRLSADASRQANLTAAFGG 285
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/281 (53%), Positives = 189/281 (67%), Gaps = 17/281 (6%)
Query: 4 GFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
G D F P G+RVL VDDD LK+LE +L++C Y VT+ A AL LLRE +D
Sbjct: 13 GLMGRERDQF-PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDM 71
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R+
Sbjct: 72 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRI 131
Query: 124 KELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSG-SDQSVDGPLLTGEDLT--SVRKR 180
+ELRNIWQHV R+K R+ N++ + + +S +D P D S RKR
Sbjct: 132 EELRNIWQHVVRRKFGN-RERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKR 190
Query: 181 KDAENRHDD-------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDL 233
K+ DD ++ + S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+L
Sbjct: 191 KELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILEL 250
Query: 234 MNVPWLTRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
MNV LTRENVASHLQKYRLYL RL Q+ + + GG
Sbjct: 251 MNVEKLTRENVASHLQKYRLYLKRLGAVASQQASIVAAFGG 291
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/281 (53%), Positives = 189/281 (67%), Gaps = 17/281 (6%)
Query: 4 GFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
G D F P G+RVL VDDD LK+LE +L++C Y VT+ A AL LLRE +D
Sbjct: 13 GLMGRERDQF-PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDM 71
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+SV+GET VMKG+ HGACDYLLKP+R+
Sbjct: 72 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRI 131
Query: 124 KELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSG-SDQSVDGPLLTGEDLT--SVRKR 180
+ELRNIWQHV R+K R+ N++ + + +S +D P D S RKR
Sbjct: 132 EELRNIWQHVVRRKFGN-RERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKR 190
Query: 181 KDAENRHDD-------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDL 233
K+ DD ++ + S+ KK RVVWS++LH+KFV AVNQ+G DK PK+IL+L
Sbjct: 191 KELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILEL 250
Query: 234 MNVPWLTRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
MNV LTRENVASHLQKYRLYL RL Q+ + + GG
Sbjct: 251 MNVEKLTRENVASHLQKYRLYLKRLGAVASQQASIVAAFGG 291
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 177/249 (71%), Gaps = 13/249 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L ILE +L++C Y VTT A AL LLRE K+ +D+VISDV+MP
Sbjct: 15 PTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAE-NRHDDRDCG 193
R+K + +D N S + R S+ + G+ KRKD N DD+D G
Sbjct: 135 RRKKFDPKDRMN-----SGNQDRPDSENGEESADPNGK---FNXKRKDQNYNEDDDQDYG 186
Query: 194 ----DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
D+S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 187 QDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 246
Query: 250 KYRLYLTRL 258
KYRLYL R+
Sbjct: 247 KYRLYLKRI 255
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 177/261 (67%), Gaps = 6/261 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L+KC Y VTT A +AL +LRE ++ +D+VISDVNMP
Sbjct: 16 PVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDVNMP 75
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D+DGFKLLE VGLEMDLPVIM+S G+T VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 76 DIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVV 135
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R+K + RD E Q + ++ +KRKD ++ +
Sbjct: 136 RRKNFDSRDQNKASNEEKAPNIAGEGSQGLRSENSADQNKRLGKKRKDQSEEEEEDGEEN 195
Query: 195 A-----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 196 GDDEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQ 255
Query: 250 KYRLYLTR-LQKDELKTSVGG 269
KYRLYL + Q+ + ++GG
Sbjct: 256 KYRLYLKKAAQQANMVAALGG 276
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 187/257 (72%), Gaps = 11/257 (4%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
ND F P+GLR+L+VDDD + L ILEKML + Y+VT C A AL++LRERKD +D+V+S
Sbjct: 4 NDQF-PSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 70 DVNMPDMDGFKLLEHVGL-EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
DV+MP M+G+KLL+ VGL E+DLPVIMMSVDG T+ VM G+ HGACDYL+KPIR +EL+N
Sbjct: 63 DVHMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSV-------DGPLLTGEDLTSVRKRK 181
IWQHV R+K + +++ N + E SGS ++V +G L+ ++
Sbjct: 123 IWQHVVRRKCVKKKELRNSQALED--NKNSGSLETVFSVSECSEGSLMKRRKKKKKKRSV 180
Query: 182 DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
D E+ +D D D ++KK+RVVWSI+LHQ+FV AVN++ DK PK+IL+LMNVP L+R
Sbjct: 181 DREDNENDLDLLDPGNSKKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNVPGLSR 240
Query: 242 ENVASHLQKYRLYLTRL 258
ENVASHLQK+R+YL RL
Sbjct: 241 ENVASHLQKFRMYLKRL 257
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/281 (51%), Positives = 186/281 (66%), Gaps = 17/281 (6%)
Query: 4 GFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
G ++ D F P G+RVL VDDD LK+LE +L++C Y VT A AL +LRE +D
Sbjct: 8 GVAARGRDQF-PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDM 66
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +GET VMKG+ HGACDYLLKP+R+
Sbjct: 67 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRI 126
Query: 124 KELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDA 183
+ELRNIWQHV R+K D N++ +E + + V + G + R K
Sbjct: 127 EELRNIWQHVVRRKF-STPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKR 185
Query: 184 ENRH----------DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDL 233
++ H + +D D S+ K+ RVVWS++LH+KFV AVN +G DK PK+IL+L
Sbjct: 186 KDYHSEEEGEDEESNGQDDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILEL 245
Query: 234 MNVPWLTRENVASHLQKYRLYLTRL-----QKDELKTSVGG 269
MNV LTRENVASHLQKYRLYL RL Q+ + S+GG
Sbjct: 246 MNVEKLTRENVASHLQKYRLYLRRLSAVASQQAGIVASLGG 286
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/255 (58%), Positives = 181/255 (70%), Gaps = 14/255 (5%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
D F PAGLRVLVVDD+ L +LEKML CSY VTTCG A DAL LLRE D +D+VISD
Sbjct: 44 DAF-PAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISD 102
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
VNMPDMDGFKLLE VGLEMDLPVIMMS +GETS VMKG+ HGACDYLLKP+R KELRNIW
Sbjct: 103 VNMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIW 162
Query: 131 QHVFRKKIHEV---RDIENI-EGFESIHMTRSGSDQSVDGPLLTGEDL-TSVRKRKDAEN 185
QHV RK+ +V R+ +++ EG + R+G D TG+ + RK++ EN
Sbjct: 163 QHVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTGDGNWRKKRKGEN 222
Query: 186 R--------HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 237
+ +++ D S+ KK RVVWS++LHQ+FV AVNQ+G D+ PK+IL+LM V
Sbjct: 223 QTFKDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILELMGVH 282
Query: 238 WLTRENVASHLQKYR 252
LTRENVASHLQ R
Sbjct: 283 GLTRENVASHLQVIR 297
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/266 (54%), Positives = 181/266 (68%), Gaps = 13/266 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L++C Y TT A AL+LLRE KD +D+VISDV+MP
Sbjct: 15 PVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLVISDVHMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +G+T VMKG+ HGACDYLLKP+RM+EL+NIWQHV
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHVI 134
Query: 135 RKK------IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
R+K ++ R+I+ S + SG+ S LT + + +
Sbjct: 135 RRKKFDSKEKNKTRNIDKPTSNSSNGLGSSGTGNSDHNEKLTKKRKDQDEDEDEEQENDH 194
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D D D S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHL
Sbjct: 195 DND--DPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 252
Query: 249 QKYRLYLTRL-----QKDELKTSVGG 269
QKYRLYL R+ Q+ + ++GG
Sbjct: 253 QKYRLYLKRISCVANQQTNMVVALGG 278
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 177/249 (71%), Gaps = 6/249 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L++C Y VTT A AL++LRE KD +D+VISDV+MP
Sbjct: 9 PIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMP 68
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 69 DMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVI 128
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR-----KDAENRHDD 189
RKK + ++ +N + SGS G + E+ +KR + E++ +
Sbjct: 129 RKKKSDPKE-KNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENG 187
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
D D S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILD+MNV +TRENVASHLQ
Sbjct: 188 NDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQ 247
Query: 250 KYRLYLTRL 258
KYRLYL R+
Sbjct: 248 KYRLYLKRI 256
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 175/248 (70%), Gaps = 15/248 (6%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+PAGL+VLVVDDD LKILE+ML++C Y VTTC A AL++LRE + +D+VISDV
Sbjct: 10 FSPAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVY 69
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLE +GLE+DLPVIMMS DGE VM+G++HGACDYLLKP+R++ELRNIWQH
Sbjct: 70 MPDMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQH 129
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD- 191
V RK + + + E E + + D + RKRK+ R +D
Sbjct: 130 VVRKLVSPIL-VSKEESGELDEYPKHQDNADFDA---------TSRKRKE---RLEDETQ 176
Query: 192 -CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D ++ KKAR+VWS +LHQ+FV AVN +G DK P+KILD+MNV LTRENVASHLQK
Sbjct: 177 LVEDVNNLKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQK 236
Query: 251 YRLYLTRL 258
YR YL RL
Sbjct: 237 YRSYLKRL 244
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/246 (58%), Positives = 176/246 (71%), Gaps = 15/246 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGL+VLVVDD+ L I+E+ML+ C Y VTTC A AL++LRE ++ +D+VISDV MP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLE+DLPVIMMS DGET VMKG++HGACDYLLKP+R+KEL NIWQHV
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDD--RDC 192
RK + RDI E E + + D ++ RKRK+ R +D +
Sbjct: 121 RKLVTP-RDIPKEESGEWDEFPKHQDNADFD---------STARKRKE---RSEDVAQLV 167
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
D ++ KKARVVWS +LHQ+FV AVN +G DK P+KILD+MNV LTRENVASHLQKYR
Sbjct: 168 EDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHLQKYR 227
Query: 253 LYLTRL 258
LYL RL
Sbjct: 228 LYLKRL 233
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 186/252 (73%), Gaps = 5/252 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F P+GLRVLVVDDD + L+ILE+ML + Y+VT C A AL++LRERK +D+V+S
Sbjct: 4 SDQF-PSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLS 62
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MP M+G+KLL+ VGLEMDLPVIMMSVDG T+ VMKG+ HGACDYL+KPIR +EL+NI
Sbjct: 63 DVHMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNI 122
Query: 130 WQHVFRKKIHEVRDIE-NIEGFESIHMTRSGSDQSVDGPLLTGED--LTSVRKRKDAENR 186
WQHV R+K ++++ N + E + S S ++V E+ L ++R D E+
Sbjct: 123 WQHVVRRKWTMNKELQRNSQALED-NKNSSSSLETVFSVSECSEESKLRKNKRRVDREDN 181
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
+D +++KK+RVVWSI+LHQ+F AVN +G +K PK+IL+LMNVP L+RENVAS
Sbjct: 182 EEDDLLDPGNNSKKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSRENVAS 241
Query: 247 HLQKYRLYLTRL 258
HLQKYRLYL RL
Sbjct: 242 HLQKYRLYLRRL 253
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/257 (58%), Positives = 179/257 (69%), Gaps = 16/257 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVLVVDDD L +LE+ML CSY VTTCG A DAL LLRE +D+VISDV+MP
Sbjct: 9 PVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDVDMP 68
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIMMS +GETS VM+GV HGACDYL+KP+ +KELRN+WQHV
Sbjct: 69 DMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQHVV 128
Query: 135 RKKIHEV-----RDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAEN 185
RKK EV + IE G E R+G D + D T + KR+ E
Sbjct: 129 RKKRQEVKAVSMKSIEEAGGCE--RQKRAGGADDADYT-SSATDTTDGNWKLSKRRKGEF 185
Query: 186 RHDDRDCGDA----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
+ ++ D + S+ KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+LM V LTR
Sbjct: 186 KEENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQGLTR 245
Query: 242 ENVASHLQKYRLYLTRL 258
ENVASHLQKYRLYL RL
Sbjct: 246 ENVASHLQKYRLYLKRL 262
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/267 (52%), Positives = 180/267 (67%), Gaps = 16/267 (5%)
Query: 4 GFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
G + D F P G+RVL VDDD LK+LE +L++C Y VT A AL LLRE KD
Sbjct: 13 GLIAREMDQF-PVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDM 71
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+SV+GET V+KG+ HGACDYLLKP+R+
Sbjct: 72 FDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRI 131
Query: 124 KELRNIWQHVFRKKIHEVRDIENI------------EGFESIHMTRSGSDQSVDGPLLTG 171
+ELRN+WQHV R+K R+ N+ + + ++ GS
Sbjct: 132 EELRNVWQHVVRRKFSN-REPSNLDFCKEFSKPPSADSYHGLNQVTCGSSDQSSRACKKR 190
Query: 172 EDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
++L S + + +N + D + S++K+ RVVWS++LH+KFV AVN +G DK PK+IL
Sbjct: 191 KELHSEEEDEGEDNDAQEND--EPSASKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRIL 248
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRL 258
+LMNV LTRENVASHLQKYRLYL RL
Sbjct: 249 ELMNVEKLTRENVASHLQKYRLYLRRL 275
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/306 (50%), Positives = 180/306 (58%), Gaps = 55/306 (17%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+GLRVLVVDDD L ILE+ML+ C YEVT C A ALSLLR+ K G+DIVISDV+MP
Sbjct: 32 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMP 91
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEHVGLEMDLPVIMMS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV
Sbjct: 92 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 151
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG- 193
RK+ E E+ SGS + + E+ DD
Sbjct: 152 RKRRSEWSVPEH-----------SGSVEDTGERQQQQQRGGGGAAVSGGEDAADDNSSSV 200
Query: 194 -----------------------------DASSTKKARVVWSIDLHQKFVKAVNQIGFDK 224
DAS+ KK RVVWS++LHQ+FV AVNQ+G +K
Sbjct: 201 NEGNNWRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEK 260
Query: 225 VGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSA--- 281
PKKIL+LMNVP LTRENVASHLQKYR+YL RL GG+ Q +S
Sbjct: 261 AVPKKILELMNVPGLTRENVASHLQKYRIYLRRL---------GGVSQHQGNLNNSFMTG 311
Query: 282 --ASFG 285
ASFG
Sbjct: 312 QDASFG 317
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/317 (47%), Positives = 194/317 (61%), Gaps = 31/317 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L+ C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 14 PVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 74 DMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 135 RKKIHEVR------DIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD---AEN 185
R + + R D + G E + SDQ+ + RKRKD +
Sbjct: 134 RSRFDKNRGSNNNGDKRDGSGNEGV----GNSDQN---------NGKGNRKRKDQYNEDE 180
Query: 186 RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D D D+ + KK RVVW+++LH+KFV AVNQ+G++K PKKILDLMNV LTRENVA
Sbjct: 181 DEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVA 240
Query: 246 SHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
SHLQK+RLYL R + G+ + + +S F N + HH + G ++
Sbjct: 241 SHLQKFRLYLKR---------ISGVANQQAIMANSELHFMQMNGLDGFHHRPIPVGSGQY 291
Query: 306 SGSNSVVQNVDAKSLEG 322
G +++ + G
Sbjct: 292 HGGAPAMRSFPPNGILG 308
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 177/267 (66%), Gaps = 32/267 (11%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
N+ P G+RVL VDDD LK+LE +L+KC YEVTT A AL +LRE ++ YD+VIS
Sbjct: 13 NEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVIS 72
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DVNMPDMDGFKLLE VGLEMDLPVIM+S G+ V KG+ HGA DYLLKP+R++EL+NI
Sbjct: 73 DVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNI 132
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGS---DQSVDGPLLTGEDLTSV--------- 177
WQHV R+K +D ++GS D+ DG GE +TS
Sbjct: 133 WQHVIRRKKWYPQD-------------QNGSPDQDKGGDGA-GEGEQVTSTGSADQNGKV 178
Query: 178 -RKRKD-----AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
RKRKD D D ++ + KK RVVWS++LHQKFV AVNQ+G DK PKKIL
Sbjct: 179 NRKRKDQDEEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKIL 238
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRL 258
DLMNV LTRENVASHLQK+RLYL RL
Sbjct: 239 DLMNVDGLTRENVASHLQKFRLYLKRL 265
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 177/267 (66%), Gaps = 32/267 (11%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
N+ P G+RVL VDDD LK+LE +L+KC YEVTT A AL +LRE ++ YD+VIS
Sbjct: 13 NEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVIS 72
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DVNMPDMDGFKLLE VGLEMDLPVIM+S G+ V KG+ HGA DYLLKP+R++EL+NI
Sbjct: 73 DVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNI 132
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGS---DQSVDGPLLTGEDLTSV--------- 177
WQHV R+K +D ++GS D+ DG GE +TS
Sbjct: 133 WQHVIRRKKWYPQD-------------QNGSPNQDKGGDGA-GEGEQVTSTGSGDQNGKV 178
Query: 178 -RKRKD-----AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
RKRKD D D ++ + KK RVVWS++LHQKFV AVNQ+G DK PKKIL
Sbjct: 179 NRKRKDQDEEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKIL 238
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRL 258
DLMNV LTRENVASHLQK+RLYL RL
Sbjct: 239 DLMNVDGLTRENVASHLQKFRLYLKRL 265
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 181/265 (68%), Gaps = 19/265 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGL VLVVDDDL LK++EKMLK C Y+VT C A+ AL +LR RK+ +DIV+SDV+MP
Sbjct: 2 PAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHMP 61
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE + E+ LPV+MMS + ++S V++G+ HGA DYLLKP+R++ELRNIWQHV
Sbjct: 62 DMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHVV 121
Query: 135 RKKIHEVRD--IENIEGFE-SIHMTRSGSDQSVDGPLLTGEDLTSVRKR----------- 180
R+ + E++E S SGS+ + T +++S + R
Sbjct: 122 RRDYSSAKSSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKKGGKS 181
Query: 181 -KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
K+AE +D D S++KK RVVWS +LH +FV AVNQ+G DK PK+ILDLM V L
Sbjct: 182 VKEAEK----KDVVDNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQGL 237
Query: 240 TRENVASHLQKYRLYLTRLQKDELK 264
TRENVASHLQKYRLYL RLQ ++ +
Sbjct: 238 TRENVASHLQKYRLYLKRLQGNDAR 262
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 196/327 (59%), Gaps = 31/327 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L+ C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 14 PVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 74 DMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 135 RKKIHEVR------DIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD---AEN 185
R + + R D + G E + G+ +G RKRKD +
Sbjct: 134 RSRFDKNRGSNNNGDKRDGSGNEGV-----GNSDPNNG--------KGNRKRKDQYNEDE 180
Query: 186 RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D D D+ + KK RVVW+++LH+KFV AVNQ+G++K PKKILDLMNV LTRENVA
Sbjct: 181 DEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVA 240
Query: 246 SHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
SHLQK+RLYL R + G+ + + +S F N + HH + G ++
Sbjct: 241 SHLQKFRLYLKR---------ISGVANQQAIMANSELHFMQMNGLDGFHHRPIPVGSGQY 291
Query: 306 SGSNSVVQNVDAKSLEGDVKGIDTIPV 332
G +++ + G + I V
Sbjct: 292 HGGAPAMRSFPPNGILGRLNSSSGIGV 318
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/260 (54%), Positives = 186/260 (71%), Gaps = 12/260 (4%)
Query: 8 PRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIV 67
P ND F P+GLR+LVVDDD + L ILEKML + Y+VT C A AL++LRERKD +D+V
Sbjct: 2 PINDQF-PSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLV 60
Query: 68 ISDVNMPDMDGFKLLEHVGL-EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+SDV+MP M+G+ LL+ VGL EMDLPVIMMSVDG T+ VM G+ HGACDYL+KPIR +EL
Sbjct: 61 LSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEEL 120
Query: 127 RNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSV--------DGPLLTGEDLTSVR 178
+NIWQHV R+K +++ + + E SGS ++V + L+ + +
Sbjct: 121 KNIWQHVVRRKCVMKKELRSSQALED--NKNSGSLETVVVSVSECSEESLMKCRNKKKKK 178
Query: 179 KRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
KR + ++D D ++KK+RVVWSI+LHQ+FV AVN++G DK PK+IL+LMNVP
Sbjct: 179 KRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPG 238
Query: 239 LTRENVASHLQKYRLYLTRL 258
L+RENVASHLQK+RLYL RL
Sbjct: 239 LSRENVASHLQKFRLYLKRL 258
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 141/260 (54%), Positives = 186/260 (71%), Gaps = 12/260 (4%)
Query: 8 PRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIV 67
P ND F P+GLR+LVVDDD + L ILEKML + Y+VT C A AL++LRERKD +D+V
Sbjct: 2 PINDQF-PSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLV 60
Query: 68 ISDVNMPDMDGFKLLEHVGL-EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+SDV+MP M+G+ LL+ VGL EMDLPVIMMSVDG T+ VM G+ HGACDYL+KPIR +EL
Sbjct: 61 LSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEEL 120
Query: 127 RNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSV--------DGPLLTGEDLTSVR 178
+NIWQHV R+K +++ + + E SGS ++V + L+ + +
Sbjct: 121 KNIWQHVVRRKCVMKKELRSSQALED--NKNSGSLETVVVSVSECSEESLMKCRNKKKKK 178
Query: 179 KRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
KR + ++D D ++KK+RVVWSI+LHQ+FV AVN++G DK PK+IL+LMNVP
Sbjct: 179 KRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPG 238
Query: 239 LTRENVASHLQKYRLYLTRL 258
L+RENVASHLQK+RLYL RL
Sbjct: 239 LSRENVASHLQKFRLYLKRL 258
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 181/279 (64%), Gaps = 14/279 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE L++C Y VTT A AL +LRE K+ +D+VISDV+MP
Sbjct: 15 PIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDVHMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 75 DMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG- 193
R+K + +D N + + + R + + D + L RK ++ + D + G
Sbjct: 135 RRKKVDNKDQNNFDNQDKL--PRGSGEATAD------QKLNKKRKDQNEDEDEDRDEHGH 186
Query: 194 ---DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D ++ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVASHLQK
Sbjct: 187 ENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASHLQK 246
Query: 251 YRLYLTRLQ--KDELKTSVGGIKQKDSPSKDSAASFGIQ 287
YRLYL R+ ++ V + D+ + G Q
Sbjct: 247 YRLYLKRISTVANQQANMVAALGSSDASYLQMGSGLGFQ 285
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/280 (52%), Positives = 181/280 (64%), Gaps = 17/280 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+R+L VDDD LK+LE +L+KC YEVTT A AL +LRE ++ YD+VISDVNMP
Sbjct: 18 PVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S G+ V KGV HGA DYLLKP+RM+EL+NIWQHV
Sbjct: 78 DMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKNIWQHVI 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R+K D + +Q V ++ RKRKD ++ ++
Sbjct: 138 RRKKWYPEDQNRSPNQDKGDDGAGEGEQGVTSTGSADQNGKLNRKRKDQDDEDEEEGEDG 197
Query: 195 -----ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
+ + KK RVVWS+DLHQKFV AVNQ+G DK PKKILDLMNV LTRENVASHLQ
Sbjct: 198 DDNEVSGNQKKPRVVWSVDLHQKFVAAVNQMGLDKAVPKKILDLMNVDGLTRENVASHLQ 257
Query: 250 KYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNS 289
K+RLYL RL S GG +Q + S +FG ++S
Sbjct: 258 KFRLYLKRL-------SSGGNQQGNMVS-----AFGAKDS 285
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 172/247 (69%), Gaps = 11/247 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LKILE +L+ C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 14 PVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDVDMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 74 DMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD---AENRHDDRD 191
R + + R N + + G +G + RKRKD ++ + D
Sbjct: 134 RSRFDKNRGSNNGDKRDGSGNEGVGYSDQNNG--------RANRKRKDQYNEDDDEEKDD 185
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
D+S+ KK RVVW+++LH+KFV AVNQ+G++K PKKILDLMNV LTRENVASHLQK+
Sbjct: 186 NDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKF 245
Query: 252 RLYLTRL 258
RLYL R+
Sbjct: 246 RLYLKRI 252
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/300 (50%), Positives = 189/300 (63%), Gaps = 41/300 (13%)
Query: 7 SPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI 66
S D F P G+RVL VDDD LK+L+ +LKKC Y+VTT A AL +LRE ++ YD+
Sbjct: 8 SSSEDKF-PVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDL 66
Query: 67 VISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
VISDVNMPDMDGFKLLE VGLEMDLPVIM+S + V KGV HGA DYLLKP+R++EL
Sbjct: 67 VISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEEL 126
Query: 127 RNIWQHVFRKKIHEVRDIENIEGFESIHMTRS-GSDQSVDGPLLTGEDLTSV-------- 177
+NIWQHV R+K + +D +RS D+ +DG G+ ++S
Sbjct: 127 KNIWQHVIRRKKLQPKD-----------QSRSQNQDKPLDGAGEGGQGMSSSGSEDQNGK 175
Query: 178 --RKRKDAENRHDD------RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKK 229
RKRKD + ++ D + + KK RVVWS++LH+KFV AVNQ+G DK PKK
Sbjct: 176 VNRKRKDQDEDEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKK 235
Query: 230 ILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNS 289
ILDLMNV LTRENVASHLQKYRLYL R I S + A+FGI++S
Sbjct: 236 ILDLMNVEGLTRENVASHLQKYRLYLKR------------ISSTASQQANMVAAFGIKDS 283
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 176/252 (69%), Gaps = 12/252 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L++C Y VTT A AL LLRE K +D+VISDV+MP
Sbjct: 17 PIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDVHMP 76
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+ + VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 77 DMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVI 136
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENR-------- 186
R+K + ++ + + +G+ + G + ++ +KRKD +
Sbjct: 137 RRKKIDSKERNKTSDHDKPN-ADNGNGRVSAGTGNSDQNGKPSKKRKDQDEDDEEENEDG 195
Query: 187 HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
HD+ D+S+ KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV LTRENVAS
Sbjct: 196 HDNE---DSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRENVAS 252
Query: 247 HLQKYRLYLTRL 258
HLQKYRLYL R+
Sbjct: 253 HLQKYRLYLKRI 264
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 223/381 (58%), Gaps = 56/381 (14%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
ME S+ R D F PAGLRV+VVDDD WL ILE+MLK+CS EVTTC ARD L+LLRE
Sbjct: 1 MEKVPSNTRTDAF-PAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLREN 59
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVG----LEMDLPVIMMSVDGETSRVMKGVQHGACDY 116
+ GYDIVISDV MP MD F L +G E ++SVDGE SRVM+G+Q GAC+Y
Sbjct: 60 RYGYDIVISDVIMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEY 119
Query: 117 LLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTS 176
LLKPIRMKELRNI QHVFR+KI + DIE+IEG + M +G D+S G LL GE+LTS
Sbjct: 120 LLKPIRMKELRNICQHVFRRKIQKEIDIESIEGTIQVQMAINGLDKSNGGHLLCGENLTS 179
Query: 177 VRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
V+ K+ +N+HDD+ G STKK+ V++ HQKF KAVNQIG D
Sbjct: 180 VKIGKEVQNKHDDKGPGGNFSTKKSAVIF----HQKFDKAVNQIGPD------------- 222
Query: 237 PWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHN 296
++EN GIK DS S+DS AS G Q S +
Sbjct: 223 ---SKEN-------------------------GIKCSDSASRDSTASIGTQYSCN-WEYI 253
Query: 297 DVSNGGYRFSG-SNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIG 355
+ NG FSG S S+++N+++ S +G+ + I + PV K+ D + +++ SQ
Sbjct: 254 ALPNGTCGFSGNSTSLLRNMESTSYDGE-EEISSTPVAYSKK---SDFSDPSESKSSQTQ 309
Query: 356 FNGSFVPGHSDVNFTSFDSAI 376
++ S S N T+FDS
Sbjct: 310 YSHSSTSSGSGANSTAFDSTF 330
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/263 (51%), Positives = 180/263 (68%), Gaps = 15/263 (5%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG--YDIVI 68
DTF PAGLRVL VDDD LKILE+ LK C+Y T AR AL +LRERK+G +D+VI
Sbjct: 4 DTF-PAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVI 62
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV MP+MDGFKLLE +GLEMDLPVIM+S + ET +MKG++HGACDY++KP+R+++LR
Sbjct: 63 SDVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRG 122
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGS-DQSVDGPLLTGEDLTSVRKRKDAENRH 187
IW HV + +++ ++ N + + R G+ D+ + +D + R + +N+
Sbjct: 123 IWTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGM-------KDGANHRNKYSKKNKK 175
Query: 188 ----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
D D + S+ KK RV W LHQKFV+AV+QIG D+ PKKIL +MNV LTREN
Sbjct: 176 VVDVADEDSENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTREN 235
Query: 244 VASHLQKYRLYLTRLQKDELKTS 266
VASHLQKYR+YL +L +L+ S
Sbjct: 236 VASHLQKYRIYLRKLGDGKLRNS 258
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 179/283 (63%), Gaps = 28/283 (9%)
Query: 5 FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGY 64
S+P P GLRVLVVDDD LKI+EKMLK+C YEVTT +AL LRERKD +
Sbjct: 1 MSTPAVSKGFPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDF 60
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
DIV+SDV+MPDMDGFKLLEH+ LE+D+PV+MMS + T V++G+ HGA DYLLKP+R++
Sbjct: 61 DIVLSDVHMPDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIE 120
Query: 125 ELRNIWQHVFRKKIHEVR-DIENIEGFESIHM-------------TRSGSDQSVDGPLLT 170
ELRNIWQHV R+K + ++ + EG + ++ S+Q D T
Sbjct: 121 ELRNIWQHVVRRKRESSQGNLRSGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDKT 180
Query: 171 GEDLTSVRKRKDAENRHDDRDCG--------------DASSTKKARVVWSIDLHQKFVKA 216
G S K + D G D+S+ KK RVVWS +LHQ+FV A
Sbjct: 181 GSAGGSGGSSKRKKGSGKKGDEGTDEVKDGSGGDENEDSSALKKPRVVWSAELHQQFVTA 240
Query: 217 VNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
VNQ+G DK PK+ILDLM V LTRENVASHLQKYRLYL RLQ
Sbjct: 241 VNQLGIDKAVPKRILDLMGVQGLTRENVASHLQKYRLYLKRLQ 283
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 176/263 (66%), Gaps = 9/263 (3%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG--YDIVI 68
DTF PAGLRVL VDDD LKILE+ LK C+Y T AR AL +LRERKDG +D+VI
Sbjct: 4 DTF-PAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVI 62
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV MP+MDGFKLLE +GLEMDLPVIM+S + ET +MKG++HGACDY++KP+R+++LR
Sbjct: 63 SDVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRG 122
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH- 187
IW HV + + R+ + + + SG D+ G E++ + R++K ++
Sbjct: 123 IWTHVVKNGKTDPRNTISSGNDDDVQKLPSG-DELPSGDADKDENIAANRRKKYSKKNKR 181
Query: 188 ----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
D D + S+ KK RV W LH+KFV+AV+QIG D PKKIL +MNV LTREN
Sbjct: 182 IVEVADEDNENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVEGLTREN 241
Query: 244 VASHLQKYRLYLTRLQKDELKTS 266
VASHLQKYR+YL +L L S
Sbjct: 242 VASHLQKYRIYLKKLGDGTLTNS 264
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 175/249 (70%), Gaps = 6/249 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L++C Y VTT A AL+LLRE K +D+VISDV+MP
Sbjct: 17 PIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDVHMP 76
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+SV+ + VMKG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 77 DMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVI 136
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG- 193
R+K + ++ ++ + + SG+ + + ++ +KRKD + D+ +
Sbjct: 137 RRKKIDSKEQNKTSDYDKTN-SDSGNGRGSAATGNSDQNGKPSKKRKDQDEDDDEENDTD 195
Query: 194 ----DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
D S+ KK RVVWS++LH+KFV AVN +G DK PKKILDLMN LTRENVASHLQ
Sbjct: 196 HDNEDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRENVASHLQ 255
Query: 250 KYRLYLTRL 258
KYRLYL R+
Sbjct: 256 KYRLYLKRI 264
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/244 (53%), Positives = 164/244 (67%), Gaps = 31/244 (12%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +L+ +L++C Y+VTT A AL +LRE K+ +D+VISDV+MP
Sbjct: 21 PVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VM+G+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 81 DMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHVI 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R+K + +D ++S D +D D + D
Sbjct: 141 RRKKIDSKD----------------QNKSAD---------------QDNALHADGEENED 169
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
SS KK RVVWS++LH+KFV AVNQ+G +K PK+ILDLMNV LTRENVASHLQKYRLY
Sbjct: 170 PSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLY 229
Query: 255 LTRL 258
L R+
Sbjct: 230 LKRI 233
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 176/254 (69%), Gaps = 14/254 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +L+ +L++C Y+VTT A AL +LRE K+ +D+VISDV+MP
Sbjct: 21 PVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VM+G+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 81 DMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHVI 140
Query: 135 RKKIHEVRDI-ENIEGFESIHMTRSGSDQSVDGPLLTG---EDLTSVRKRKDAENRHDDR 190
R+K + +D ++ + ++H G +GP + ++ RKRKD ++
Sbjct: 141 RRKKIDSKDQNKSADQDNALHADGEGG----EGPPSSSNADQNGKLNRKRKDQNEDEEEE 196
Query: 191 DCGDA------SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+ SS KK RVVWS++LH+KFV AVNQ+G +K PK+ILDLMNV LTRENV
Sbjct: 197 GEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENV 256
Query: 245 ASHLQKYRLYLTRL 258
ASHLQKYRLYL R+
Sbjct: 257 ASHLQKYRLYLKRI 270
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/255 (52%), Positives = 178/255 (69%), Gaps = 31/255 (12%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD---GYDIVIS 69
F+P+GL+VLVVDDD LK++ ML++C+YEV T +DAL LLR+R++ +D+V+S
Sbjct: 29 FSPSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLS 88
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV MPDMDGFKLLEH+GLE+DLPVIMMS +G+T V++GV HGA D+L+KP+R++ELRN+
Sbjct: 89 DVYMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNV 148
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVR-----KRKDAE 184
WQHV R++ S+H+ R+ + S G DL + KRK+ E
Sbjct: 149 WQHVVRRR--------------SLHVGRASDEHS-------GLDLEQHQHHHGVKRKEVE 187
Query: 185 NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 244
+ A+ KK RVVWS+++HQ+FV AVNQ+G DK PK+ILDLMNV LTRENV
Sbjct: 188 ALQVQHETQGAN--KKPRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENV 245
Query: 245 ASHLQKYRLYLTRLQ 259
ASHLQKYRLYL R Q
Sbjct: 246 ASHLQKYRLYLKRAQ 260
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/246 (59%), Positives = 172/246 (69%), Gaps = 16/246 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVLVVDDD L +L+KML +C Y VT C A +AL LLRE+K +D+VISDV MP
Sbjct: 12 PIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIMMS +GETS VM+G+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 72 DMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHVV 131
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGS--DQSVDGPLLTGEDLTSVRKRKDAENRHDDRDC 192
RK+ E+ SG D S P T + RK KDA++ D
Sbjct: 132 RKRGAR----------EAAKEESSGEWDDSSEKFPEYT----SKKRKEKDADSSGGDEQI 177
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
D S KKARVVWS DLH+ FVKAVNQ+G +K PK+IL++MNV LTRENVASHLQKYR
Sbjct: 178 EDISGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGLTRENVASHLQKYR 237
Query: 253 LYLTRL 258
L L RL
Sbjct: 238 LGLKRL 243
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 173/246 (70%), Gaps = 11/246 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVLVVDD+ L ILE+ML +C+Y VTTCG A +ALS+LRE +D+VISDV+MP
Sbjct: 51 PVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDVDMP 110
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S +GETS VMKG+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 111 DMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQHVV 170
Query: 135 RKKIHEVRDI--ENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHD 188
RKK EV+ + +++E + G + D T + KR+ E + +
Sbjct: 171 RKKRREVKAVATKSVEEAGGCERPKRGGGADDADYTSSATDTTDSNWKLTKRRKGEFKDE 230
Query: 189 DRDCGDA-----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
+ + + S+ K+ RVVWS++LHQ+FV AVNQ+G DK PK+IL+LM V LTREN
Sbjct: 231 NEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQGLTREN 290
Query: 244 VASHLQ 249
VASHLQ
Sbjct: 291 VASHLQ 296
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 175/262 (66%), Gaps = 21/262 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L+KC Y VTT A AL +LRE K+ +D+VISDVNMP
Sbjct: 21 PIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDVNMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S T V KGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 81 DMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQHVL 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVD-----GPLLTGEDLTSVRKRKD------A 183
R+K V++ ++ + + + QSV+ P ++ ++ S +++KD
Sbjct: 141 RRKKPSVKN-------QNKSIIGNNTSQSVEVAKGCPPAVSTDNEKSGKRQKDQDDDEEG 193
Query: 184 ENRHDDRDCGDASSTKKARVVW---SIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
+ D+S+ KK RV W +LH+KFV AVN +G++K PKKILDLMNV LT
Sbjct: 194 GEEDSTYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAVPKKILDLMNVEGLT 253
Query: 241 RENVASHLQKYRLYLTRLQKDE 262
RENVASHLQKYR YL +L +E
Sbjct: 254 RENVASHLQKYRQYLKKLCSEE 275
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/246 (58%), Positives = 173/246 (70%), Gaps = 16/246 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVLVVDDD L +L+KML +C Y VT C A +AL LLRE+K +D+VISDV MP
Sbjct: 12 PIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIMMS +GETS VM+G+ HGACDYLLKP+R++ELRNIWQHV
Sbjct: 72 DMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHVV 131
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGS--DQSVDGPLLTGEDLTSVRKRKDAENRHDDRDC 192
RK+ + E+ SG D S P T + RK KDA++ D
Sbjct: 132 RKRGAK----------EAAKEESSGEWDDSSEKFPEYT----SKKRKDKDADSSGGDDPI 177
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
D S KKARVVWS DLH+ FVKAVNQ+G +K PK+IL++M+V LTRENVASHLQKYR
Sbjct: 178 EDMSGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGLTRENVASHLQKYR 237
Query: 253 LYLTRL 258
L L RL
Sbjct: 238 LGLKRL 243
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/253 (51%), Positives = 175/253 (69%), Gaps = 19/253 (7%)
Query: 3 NGFSSPRNDTFN--PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
+G R+D++ PAGL+VLVVDDD LK++E ML++C+Y+VTTC + AL LR+R
Sbjct: 37 SGEDLARSDSWEMFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKLRDR 96
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
+D+V+SDV MPDMDGFKLLEH+GLE+DLPVIMMS +GET+ V++GV HGA D+L+KP
Sbjct: 97 SVHFDLVLSDVYMPDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLRGVTHGAVDFLIKP 156
Query: 121 IRMKELRNIWQHVFRKK----IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTS 176
+R++ELRN+WQHV R+K + + RD +I E + + + L+ D+
Sbjct: 157 VRVEELRNVWQHVVRRKRDQAVSQARDSRDISDEEGTDDGKPRDKKRKEVILVLWWDMQR 216
Query: 177 VRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
RD D S KKARVVWS+++HQ+FV+AVNQ+G DK PK+ILDLMNV
Sbjct: 217 -------------RDSDDGVSAKKARVVWSVEMHQQFVQAVNQLGIDKAVPKRILDLMNV 263
Query: 237 PWLTRENVASHLQ 249
LTRENVASHLQ
Sbjct: 264 DGLTRENVASHLQ 276
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 195/313 (62%), Gaps = 32/313 (10%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
ND F P G+RVL VDDD L++L+ +L++C Y VTT A AL +LRE K+ +D+VIS
Sbjct: 11 NDQF-PIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVIS 69
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIM+S + + VMKG+ HGACDYLLKP+R+++L+NI
Sbjct: 70 DVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNI 129
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGE-DLTSV-RKRKDAENR- 186
WQHV R++ + RD N + + R G + G G D + +KRKD
Sbjct: 130 WQHVIRRRRFDPRDQNNSDSRDK----RQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDD 185
Query: 187 --------HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
HD+ D SS KK RVVWS++LH+KFV AVNQ+G D+ PKKILDLMNV
Sbjct: 186 DEENDENGHDNE---DPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEK 242
Query: 239 LTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
LTRENVASHLQKYRLYL R I + + A+ G +S +H N +
Sbjct: 243 LTRENVASHLQKYRLYLKR------------ISCVANQQANMVAALGSTDSTYLHSLNGL 290
Query: 299 SNGGYRFSGSNSV 311
N Y SGS +
Sbjct: 291 GN-FYNLSGSGQL 302
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/313 (48%), Positives = 195/313 (62%), Gaps = 32/313 (10%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
ND F P G+RVL VDDD L++L+ +L++C Y VTT A AL +LRE K+ +D+VIS
Sbjct: 11 NDQF-PIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVIS 69
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIM+S + + VMKG+ HGACDYLLKP+R+++L+NI
Sbjct: 70 DVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNI 129
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGE-DLTSV-RKRKDAENR- 186
WQHV R++ + RD N + + R G + G G D + +KRKD
Sbjct: 130 WQHVIRRRRFDPRDQNNSDSRDK----RQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDD 185
Query: 187 --------HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
HD+ D SS KK RVVWS++LH+KFV AVNQ+G D+ PKKILDLMNV
Sbjct: 186 DEENDENGHDNE---DPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEK 242
Query: 239 LTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDV 298
LTRENVASHLQKYRLYL R I + + A+ G +S +H N +
Sbjct: 243 LTRENVASHLQKYRLYLKR------------ISCVANQQANMVAALGSTDSTYLHSLNGL 290
Query: 299 SNGGYRFSGSNSV 311
N Y SGS +
Sbjct: 291 GN-FYNLSGSGQL 302
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 196/310 (63%), Gaps = 26/310 (8%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
ND F P G+RVL VDDD L++L+ +L++C Y VTT A AL +LRE K+ +D+VIS
Sbjct: 11 NDQF-PIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVIS 69
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV+MPDMDGFKLLE VGLEMDLPVIM+S + + VMKG+ HGACDYLLKP+R+++L+NI
Sbjct: 70 DVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNI 129
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGE-DLTSV-RKRKD----- 182
WQHV R++ + RD N + + R G + G G D + +KRKD
Sbjct: 130 WQHVIRRRRFDPRDQNNSDSRDK----RQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDD 185
Query: 183 -AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
EN + D D SS KK RVVWS++LH+KFV AVNQ+G D+ PKKILDLMNV LTR
Sbjct: 186 DEENDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTR 245
Query: 242 ENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNG 301
ENVASHLQKYRLYL R I + + A+ G +S +H N + N
Sbjct: 246 ENVASHLQKYRLYLKR------------ISCVANQQANMVAALGSTDSTYLHSLNGLGN- 292
Query: 302 GYRFSGSNSV 311
Y SGS +
Sbjct: 293 FYNLSGSGQL 302
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 172/266 (64%), Gaps = 12/266 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LEK L C Y VTT + +AL LLRE++ +D++ISDVNMP
Sbjct: 18 PVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+MDGFKLLE VGLEMDLP IM+S + RVMKGV GACDYL+KPIR++EL+NIWQHV
Sbjct: 78 EMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RKKI + I I SG D S + + ++ T RKRK+ + +
Sbjct: 138 RKKIESKDQNQGI-----ISDGVSGQDTSSEN--IPKKNKTHGRKRKEQSEEEEADTDEE 190
Query: 195 A----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
S+ KK R VW +LH+KFV VN +G DK PKKI DLMNV LTRENVASHLQK
Sbjct: 191 NDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTRENVASHLQK 250
Query: 251 YRLYLTRLQKD-ELKTSVGGIKQKDS 275
YRL L R K ++ ++ ++QK S
Sbjct: 251 YRLSLKRPSKQAKVDAALDPLQQKGS 276
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/247 (53%), Positives = 170/247 (68%), Gaps = 24/247 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLR+LVVDDD LK++E+ML+KCSYEVT C A AL++LR++ YD+V+SDV MP
Sbjct: 2 PAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYMP 61
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE VGLEMDLPVIMMS +G+TS V++GV HGACDYL+KP+R++ELRN+WQHV
Sbjct: 62 DMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHVV 121
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAE--NRHDDRDC 192
R++ D +G + GPL G + V + + ++ H R+
Sbjct: 122 RRRRQRKADA-------------AGQRERRVGPLGGGACVRRVNRAQPSKLNQGHVQRER 168
Query: 193 GDA---------SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
G S KKARVVWS+++HQ+FV AVNQ+G DK PKKIL++M V LTREN
Sbjct: 169 GRGRVGKAPLLNGSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTREN 228
Query: 244 VASHLQK 250
VASHLQK
Sbjct: 229 VASHLQK 235
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 176/277 (63%), Gaps = 32/277 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAG+RVL VDDD +LK+LEK L C+Y VTT +AL LLRE+KD +D+VISDV+MP
Sbjct: 21 PAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLP IM+SV+ + +VMK V HGAC+YL+KPIRM+EL++IWQHV
Sbjct: 81 DMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHVV 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH-----DD 189
RKKI + I I G D S + + ++ RKRK+ +D
Sbjct: 141 RKKIESKDQNQGI-----ISDGVYGQDTSSEN--IANKNKMHGRKRKEQTEEEEAEQDND 193
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD-------KVGPKKILDLMNVPWLTRE 242
C S+ KK R+VW +LH+KFV AVN +G D + PKKILDLMNV LTRE
Sbjct: 194 EKC---STRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNVEGLTRE 250
Query: 243 NVASHLQKYRLYLTRLQKD----------ELKTSVGG 269
NV+SHLQ+YR+ + L K + K SVGG
Sbjct: 251 NVSSHLQRYRIDIKWLSKQDRGDDALDPYQQKGSVGG 287
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 188/310 (60%), Gaps = 42/310 (13%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L+IL+ +L++C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 14 PVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV+HGACDYLLKP+R++EL+NIWQHV
Sbjct: 74 DMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD------AENRHD 188
RK + G +G + RKRK+ E R +
Sbjct: 134 RKSKLKKNKSNVSNG--------------------SGNCDKANRKRKEQYEEEEEEERGN 173
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D D D ++ KK RV+W+ +LH KF+ AV+ +G ++ PKKILDLMNV LTRENVASHL
Sbjct: 174 DND--DPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHL 231
Query: 249 QKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSIT-----VHHHNDVSNGGY 303
QK+R+ L ++ D I+Q + + DS F NS HHH + G
Sbjct: 232 QKFRVALKKVSDD-------AIQQANRAAIDS--HFMQMNSQKGLGGFYHHHRGIPVGSG 282
Query: 304 RFSGSNSVVQ 313
+F G ++++
Sbjct: 283 QFHGGTTMMR 292
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/281 (49%), Positives = 178/281 (63%), Gaps = 23/281 (8%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG--YDIVI 68
DTF P GLRVL VDDD LKILE+ LK C+Y T A+ AL +LRERKDG +D+VI
Sbjct: 4 DTF-PVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVI 62
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV M MDGFKLLE +GLEMDLPVIM+S + ET +MKG++HGACDY++KP+R+++LR
Sbjct: 63 SDVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRG 122
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
IW HV + + R+ + + + SG DG GE + R++K +
Sbjct: 123 IWTHVVKNSKIDPRNNIGSDSDDVVQKLPSG-----DGD--KGEKVGETRQKKYPKKNKK 175
Query: 189 DRDCGD-----ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
D D S+ KK RV W +LHQKFV+AV QIG D+ PKKIL++M+V LTREN
Sbjct: 176 TVDVADEDNEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMDVEGLTREN 235
Query: 244 VASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASF 284
VASHLQKYR+YL +L L++S SP D +F
Sbjct: 236 VASHLQKYRIYLRKLGDGTLRSS--------SPFADETEAF 268
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 176/270 (65%), Gaps = 30/270 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYE----------------VTTCGLARDALSLLR 58
P G+RVL VDDD L +L+ +L++C Y+ VTT A AL +LR
Sbjct: 21 PVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTNQAITALKMLR 80
Query: 59 ERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
E K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S + VM+G+ HGACDYLL
Sbjct: 81 ENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDQKLVMRGITHGACDYLL 140
Query: 119 KPIRMKELRNIWQHVFRKKIHEVRDI-ENIEGFESIHMTRSGSDQSVDGPLLTG---EDL 174
KP+R++EL+NIWQHV R+K + +D ++ + ++H G +GP + ++
Sbjct: 141 KPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGG----EGPPSSSNADQNG 196
Query: 175 TSVRKRKDAENRHDDRDCGDA------SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPK 228
RKRKD ++ + SS KK RVVWS++LH+KFV AVNQ+G +K PK
Sbjct: 197 KLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPK 256
Query: 229 KILDLMNVPWLTRENVASHLQKYRLYLTRL 258
+ILDLMNV LTRENVASHLQKYRLYL R+
Sbjct: 257 RILDLMNVEGLTRENVASHLQKYRLYLKRI 286
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 169/244 (69%), Gaps = 23/244 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD---V 71
PAGLR+LVVDDD LK++E+ML+KCSY+VTTC A AL+LLR++ YD+V+SD V
Sbjct: 25 PAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFLV 84
Query: 72 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
+ DMDGFKLLE VGLEMDLPVIMMS +G+TS V++GV HGACDYL+KP+R++ELRN+WQ
Sbjct: 85 SSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQ 144
Query: 132 HVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV-----RKRKDAENR 186
HV R++ + M +G +G TG +L +V
Sbjct: 145 HVVRRR-------------RQLRMMGAGCSGGANGLGSTG-NLGAVATGSAGLGLGLGTA 190
Query: 187 HDDRDCG-DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
D+ G D S+KKARVVWS+++HQ+FV AVNQ+G DK PKKIL++MNV LTRENVA
Sbjct: 191 ADELGLGLDNGSSKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNVDGLTRENVA 250
Query: 246 SHLQ 249
SHLQ
Sbjct: 251 SHLQ 254
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 172/246 (69%), Gaps = 15/246 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L+I+ +ML++C Y+VT C A +ALSLLRE +DIV+SD++MP
Sbjct: 21 PEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D+ G KLLE +GLEMD+PV+MMS D + +MKG+ HGACDY +KP+RM ++ +WQHV
Sbjct: 81 DISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHVI 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ + ++++E+ + V+G E S++++KD E+ + R+
Sbjct: 141 RKRRNGLKEMEH------------AMEDDVEGG--NEEGSRSMKRKKDREDEGESRNAM- 185
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
++ KK R+VW+ LHQ+FV AVNQ+G+ K PKKIL+ MN+P LTRENVASHLQK+RLY
Sbjct: 186 PTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTRENVASHLQKFRLY 245
Query: 255 LTRLQK 260
L+R+ +
Sbjct: 246 LSRVSE 251
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 188/306 (61%), Gaps = 28/306 (9%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L+ILE +L +C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 11 PVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDVDMP 70
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV+HGACDYLLKP+R++EL+NIWQHV
Sbjct: 71 DMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 130
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD-------AENRH 187
RK + ++ S + SDQ+ + + RKRKD E R
Sbjct: 131 RKG-----KFKKMKSSLSNGESEGNSDQN---------GVKANRKRKDQFEEEEEDEERG 176
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
+ D D ++ KK RV+W+ +LH K + AV+ +G +K PKKILDLMNV LTRENVASH
Sbjct: 177 IEND--DPTAQKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLTRENVASH 234
Query: 248 LQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSG 307
LQK+R L ++ + + + + DS ++ G+ HHH + G +F G
Sbjct: 235 LQKFRSALKKITNETNQQA--NMAAMDSHFMQMSSLKGLGG---FHHHRPIPLGSGQFHG 289
Query: 308 SNSVVQ 313
+ ++
Sbjct: 290 GAATMR 295
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 183/305 (60%), Gaps = 33/305 (10%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L+IL+ +L +C Y VTT A+ AL LLRE K+ +D+VISDV+MP
Sbjct: 14 PVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMP 73
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S + VMKGV+HGACDYLLKP+R++EL+NIWQHV
Sbjct: 74 DMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD------AENRHD 188
RK + G + SD+ + RKRK+ E R +
Sbjct: 134 RKSKLKKNKSSVSNG-------AANSDK-------------ANRKRKEQYEEEEEEERGN 173
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
+ D D ++ KK RV+W+ +LH KF+ AV+ +G +K PKKILDLMNV LTRENVASHL
Sbjct: 174 END--DPTAQKKPRVLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKLTRENVASHL 231
Query: 249 QKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGS 308
QK+R+ L ++ + + + S G +HH + G +F G
Sbjct: 232 QKFRVALKKMSDKANQQATRAALESHLMQMSSHKGLG-----GFYHHRGIPVGTGQFHGG 286
Query: 309 NSVVQ 313
++++
Sbjct: 287 ATMMR 291
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/261 (49%), Positives = 171/261 (65%), Gaps = 20/261 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L+KC Y VTT A AL +LR+ ++ +D+VISDVNMP
Sbjct: 8 PVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVISDVNMP 67
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE VGLEMDLPVIM+S G+ RVM+GV GACDYL KP+R++EL+NIWQHV
Sbjct: 68 DMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNIWQHVL 127
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGS--------------DQSVDGPLLTGEDLTSVRKR 180
R++I + +D +N E + +G Q++ T +++ +KR
Sbjct: 128 RRRI-DSKD-KNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIKLGQKR 185
Query: 181 KDAENRHDDRDCGDA----SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
K+ ++ + S+ KK R+VW +LH+KF+ AVN +G DK PK+ILDLMNV
Sbjct: 186 KELSEDEEEEEYDKENEEHSNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKRILDLMNV 245
Query: 237 PWLTRENVASHLQKYRLYLTR 257
LTRENVASHLQKYRL L +
Sbjct: 246 EGLTRENVASHLQKYRLGLRK 266
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 170/249 (68%), Gaps = 11/249 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L ILEKML+ C Y+VT C A+DALS+LRE K+ +DIV+ D++MP
Sbjct: 32 PAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVIDLHMP 91
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGF+LLE EM LPV+MMS D + + KGV HGACDYL+KP+RM+ L+ IWQHV
Sbjct: 92 DMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIWQHVI 151
Query: 135 RKKIHEVRD-IENIEGFES--IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
RKK + +D +E + G E + +T+ SD ++ G +L + R K N D +
Sbjct: 152 RKKKNTAKDELEQLIGLEDDILLLTKPDSDDD----MIHG-NLNNTRNSKRRRNNEYDDE 206
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDL---MNVPWLTRENVASHL 248
D ++T K R++W+ +LH+KFV+A N +G + P KIL+ MNV +TRE++ASHL
Sbjct: 207 PSDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKILECLQRMNVHSITREHIASHL 266
Query: 249 QKYRLYLTR 257
QKYR+YL +
Sbjct: 267 QKYRMYLRK 275
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 20/248 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL VDD L +LE +L++C Y+ T A AL +LRER +D+VISDV+M
Sbjct: 13 PEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHML 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIM S +GE +MKGV HGACDYL+KP+ +K+++NIWQHV+
Sbjct: 73 DMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHDDR 190
RK+ ++R+ G+ DG L G T + + R D +N +++
Sbjct: 133 RKRKLDIRNHNG--GYN-------------DGGELVGATRTKRKYTRKMRNDGDNYGENK 177
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D S+ K+ RVVW+ +LH+ FV AV+++G D+ P+KIL +M V ++TREN+ASHLQK
Sbjct: 178 ENMD-STLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 237 YRLYLKRI 244
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 20/248 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL VDD L +LE +L++C Y+ T A AL +LRER +D+VISDV+M
Sbjct: 13 PEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHML 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIM S +GE +MKGV HGACDYL+KP+ +K+++NIWQHV+
Sbjct: 73 DMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHDDR 190
RK+ ++R+ G+ DG L G T + + R D +N +++
Sbjct: 133 RKRKLDIRNHNG--GYN-------------DGGELVGATRTKRKYTRKMRNDGDNYGENK 177
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D S+ K+ RVVW+ +LH+ FV AV+++G D+ P+KIL +M V ++TREN+ASHLQK
Sbjct: 178 ENMD-STLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 237 YRLYLKRI 244
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 20/248 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL VDD L +LE +L++C Y+ T A AL +LRER +D+VISDV+M
Sbjct: 13 PEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHML 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIM S +GE +MKGV HGACDYL+KP+ +K+++NIWQHV+
Sbjct: 73 DMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHDDR 190
RK+ ++R+ G+ DG L G T + + R D +N +++
Sbjct: 133 RKRKLDIRNHNG--GYN-------------DGGELVGATRTKRKYTRKMRNDGDNYGENK 177
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D S+ K+ RVVW+ +LH+ FV AV+++G D+ P+KIL +M V ++TREN+ASHLQK
Sbjct: 178 ENMD-STLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 237 YRLYLKRI 244
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 20/248 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL VDD L +LE +L++C Y+ T A AL +LRER +D+VISDV+M
Sbjct: 28 PEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHML 87
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIM S +GE +MKGV HGACDYL+KP+ +K+++NIWQHV+
Sbjct: 88 DMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 147
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHDDR 190
RK+ ++R+ G+ DG L G T + + R D +N +++
Sbjct: 148 RKRKLDIRNHNG--GYN-------------DGGELVGATRTKRKYTRKMRNDGDNYGENK 192
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D S+ K+ RVVW+ +LH+ FV AV+++G D+ P+KIL +M V ++TREN+ASHLQK
Sbjct: 193 ENMD-STLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 251
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 252 YRLYLKRI 259
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 167/248 (67%), Gaps = 20/248 (8%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL VDD L +LE +L++C Y+ T A AL +LRER +D+VISDV+M
Sbjct: 13 PEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHML 72
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLE +GLEMDLPVIM S +GE +MKGV HGACDYL+KP+ +K+++NIWQHV+
Sbjct: 73 DMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT----SVRKRKDAENRHDDR 190
RK+ ++R+ G+ DG L G T + + R D +N +++
Sbjct: 133 RKRKLDIRNHNG--GYN-------------DGGELVGATRTKRKYTRKMRNDGDNYGENK 177
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D S+ K+ RVVW+ +LH+ FV AV+++G D+ P+KIL +M V ++TREN+ASHLQK
Sbjct: 178 ENMD-STLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENIASHLQK 236
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 237 YRLYLKRI 244
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 175/268 (65%), Gaps = 21/268 (7%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
+E G D F P G+RVL VDDD L +LE +L++C Y VTT A AL +LRE
Sbjct: 3 VEQGIGDSNIDQF-PIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLREN 61
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGAC YLLKP
Sbjct: 62 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKP 121
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
+R++EL+ IWQHV R+K + +D + + + GS ++V D +KR
Sbjct: 122 VRIEELKTIWQHVIRRKKSDNKDRNSSDNRDK---PNQGSSEAV-------PDQKLNKKR 171
Query: 181 KDAENRHDDRDCGDA----------SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKI 230
KD D+ D ++ KK RVVWS++LH+KFV AVNQ+G DK PKKI
Sbjct: 172 KDQNGDDDEDHDEDEDEDEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDKAVPKKI 231
Query: 231 LDLMNVPWLTRENVASHLQKYRLYLTRL 258
LDLMNV LTRENVASHLQKYR YL R+
Sbjct: 232 LDLMNVEKLTRENVASHLQKYRHYLKRI 259
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 150/209 (71%), Gaps = 4/209 (1%)
Query: 56 LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACD 115
+LRE + +D++ISDV+MPDM+GF+LLE VGLEMDLPVIMMS D T VMKG++HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 116 YLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTR-SGSDQSVDGPLLTGED- 173
YL+KP+RM+EL+NIWQHV RKK ++ E+ + R + +D G +
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSANDGAED 120
Query: 174 -LTSVRKRKDAENRHDDRDCGDAS-STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
S +K++D E + + GD S ++KK RVVWS++LHQ+FV AVN +G DK PKKIL
Sbjct: 121 SWKSQKKKRDKEEDDSELESGDPSNNSKKLRVVWSVELHQQFVNAVNHLGIDKAVPKKIL 180
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRLQK 260
+LMNVP LTRENVASHLQK+RLYL R+ +
Sbjct: 181 ELMNVPGLTRENVASHLQKFRLYLKRIAQ 209
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 164/243 (67%), Gaps = 15/243 (6%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L+I+ +ML++C Y+VT C A +ALSLLRE +DIV+SD++MP
Sbjct: 21 PEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMP 80
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D+ G KLLE +GLEMD+PV+MMS D + +MKG+ HGACDY +KP+RM ++ +WQHV
Sbjct: 81 DISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHVI 140
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK+ + ++++E+ + V+G E S++++KD E+ + R+
Sbjct: 141 RKRRNGLKEMEH------------AMEDDVEGG--NEEGSRSMKRKKDREDEGESRN-AM 185
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
++ KK R+VW+ LHQ+FV AVNQ+G+ K PKKIL+ MN+P LTRENVASHLQ
Sbjct: 186 PTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTRENVASHLQVMEKI 245
Query: 255 LTR 257
+R
Sbjct: 246 FSR 248
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 164/247 (66%), Gaps = 5/247 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LEK L C Y VTT +AL LLRE++D +D+VISDV+MP
Sbjct: 18 PVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMP 77
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+MDGFKLLE VGLE+DLP IM+S + + RVMKGV GACDYL+KPIR++EL+NIWQHV
Sbjct: 78 EMDGFKLLEQVGLEIDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RKKI E +D + I + S+ + G+ + + ++ E + D +
Sbjct: 138 RKKI-ESKDRNKGIITDGICSQDTSSENIANRNKTRGQKIKEQSEDEEEEEEEAEEDNDE 196
Query: 195 ASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
ST KK R+VW +LH+KFV V+Q+ + PKKI DLMNV LTRENVASHLQKY+L
Sbjct: 197 ERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLTRENVASHLQKYKL 253
Query: 254 YLTRLQK 260
L R K
Sbjct: 254 SLKRPSK 260
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 170/269 (63%), Gaps = 30/269 (11%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R+D F P G+RVL VDD+ L+ LE++L +C Y VT +R AL LLRE + +D+VI
Sbjct: 10 RHDKF-PVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVI 68
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV MPD DGFKLLE +GLEMDLPVIM+S + VMKG+ HGACDYL+KP+ +KEL+N
Sbjct: 69 SDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQN 127
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAEN--- 185
IW HV +K I +NI G + + P + ++ +KRK+ N
Sbjct: 128 IWHHVVKKNIKSY--AKNI-----------GPSRQLLPPSESNLVPSASKKRKEKANDSG 174
Query: 186 ------------RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDL 233
++D +A + KK RVVWS +LHQKFV AV Q+G DK PKKILDL
Sbjct: 175 DEDDSDREEDDGEGSEQDGDEAGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDL 234
Query: 234 MNVPWLTRENVASHLQKYRLYLTRLQKDE 262
M++ LTRENVASHLQKYRLYL ++ + +
Sbjct: 235 MSIEGLTRENVASHLQKYRLYLKKIDEGQ 263
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 171/256 (66%), Gaps = 11/256 (4%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R+D F P G+RVL VDD+ L+ LE++L +C Y VT +R AL +LRE + +D+VI
Sbjct: 10 RHDKF-PVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVI 68
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV MPD DGFKLLE +GLEMDLPVIM+S + VMKG+ HGACDYL+KP+ +KEL+N
Sbjct: 69 SDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQN 127
Query: 129 IWQHVFRKKIHEVRDIENIEGFESI-HMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH 187
IW HV +K I + +S+ +R D+ D +G++ S R+ D E
Sbjct: 128 IWHHVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVND----SGDEDDSDREEDDGEGSE 183
Query: 188 DDRDCGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D GD S T KK RVVWS +LHQKFV AV Q+G DK PKKILDLM++ LTRENVAS
Sbjct: 184 QD---GDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVAS 240
Query: 247 HLQKYRLYLTRLQKDE 262
HLQKYRLYL ++ + +
Sbjct: 241 HLQKYRLYLKKIDEGQ 256
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 170/257 (66%), Gaps = 13/257 (5%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R D FNPA LRVL +D ++ LK L +L+KC Y VT+ LA +AL +LRE K+ Y +VI
Sbjct: 18 RGDMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVI 77
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+DV DMDGFKLLE +GLEMDLPVI++S + S +MKG++HGA DYLLKP+R++E++N
Sbjct: 78 TDVKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQN 137
Query: 129 IWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
IWQHV RK++ + D + E I S + P+ E +T V++++ N +
Sbjct: 138 IWQHVVRKRLSDSSDKSSSFTKEIIEQESVPSTE----PMAEAE-VTGVKEKEIIGNPN- 191
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGF--DKVGPKKILDLMNVPWLTRENVAS 246
GDA S KK RV WS +LH KFV V ++ ++V PK+I ++MNV L+REN+AS
Sbjct: 192 ----GDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGLSRENIAS 247
Query: 247 HLQKYRLYLTRLQKDEL 263
HLQKYR L + KD++
Sbjct: 248 HLQKYRNLLKK-HKDKM 263
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 168/279 (60%), Gaps = 48/279 (17%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD---GYDIV 67
DTF PAGLRVL V+ D K+LE+ L+ C+Y T A+ AL +LRERK+ +D+V
Sbjct: 4 DTF-PAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLV 62
Query: 68 ISDVNMP--DMDGFKLLEHVGLEMDLPVI------------------MMSVDGETSRVMK 107
IS+V MP +MDGFKLLE +GLEMDLPVI ++S + ET +MK
Sbjct: 63 ISNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMK 122
Query: 108 GVQHGACDYLLKPIRMKELRNIWQHVFR--KKIHEVRDIENIEGFESIHMTRSGSDQSVD 165
G++HGAC+Y++KP+R+++LR IW HV + K H +R +
Sbjct: 123 GIKHGACEYMVKPVRLEQLRGIWTHVVKNSKTDHAIRKL--------------------- 161
Query: 166 GPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKV 225
P G+ + + ++ D D + S+ KK RV W +LHQKFV+A+NQIG D+
Sbjct: 162 -PCGDGDKVKNYSRKNKMVVDVADDDKDNTSTQKKQRVQWCGELHQKFVQAINQIGMDRA 220
Query: 226 GPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELK 264
PKKIL++MNV LT+ENVASHLQKYR+YL +L + L+
Sbjct: 221 VPKKILEVMNVEGLTKENVASHLQKYRIYLRKLSEGTLR 259
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/266 (50%), Positives = 169/266 (63%), Gaps = 25/266 (9%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
+E G D F P G+RVL VDDD L +LE +L++C Y VTT A AL +LRE
Sbjct: 3 VEQGIGDSNIDQF-PIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLREN 61
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGAC YLLKP
Sbjct: 62 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKP 121
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
+R++EL+ IWQHV R+K + +D + + + GS ++V L +KR
Sbjct: 122 VRIEELKTIWQHVIRRKKSDNKDRNSSDNRDK---PNQGSSEAVPDQKLN-------KKR 171
Query: 181 KDAENRHDDRDCGDA--------SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILD 232
KD D+ D ++ KK RVVWS++LH+KFV AVNQ+G DK PKKILD
Sbjct: 172 KDQNGDEDEDHDEDEDEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILD 231
Query: 233 LMNVPWLTRENVASHLQKYRLYLTRL 258
LMNV LTREN KYR YL R+
Sbjct: 232 LMNVEKLTREN------KYRHYLKRI 251
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 165/247 (66%), Gaps = 10/247 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL VDD+ L+ LE++L +C Y VT +R AL +LRE + +D+VISDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
GFKLLE +GLEMDLPVIM+S + VMKG+ HGACDYL+KP+ +KEL+NIW HV +K
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 138 IHEVRDIENIEGFESI-HMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDAS 196
I + +S+ +R D+ D +G++ S R+ D E D GD S
Sbjct: 120 IKSYAKLLPPSESDSVPSASRKRKDKVND----SGDEDDSDREEDDGEGSEQD---GDGS 172
Query: 197 ST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 255
T KK RVVWS +LHQKFV AV Q+G DK PKKILDLM++ LTRENVASHLQKYRLYL
Sbjct: 173 GTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYL 232
Query: 256 TRLQKDE 262
++ + +
Sbjct: 233 KKIDEGQ 239
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/256 (51%), Positives = 169/256 (66%), Gaps = 14/256 (5%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
R+D F P G+RVL VDD+ L+ LE++L +C Y VT +R AL +LRE + +D+VI
Sbjct: 10 RHDKF-PVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVI 68
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
SDV MPD DGFKLLE +GLEMDLPVI S + VMKG+ HGACDYL+KP+ +KEL+N
Sbjct: 69 SDVEMPDTDGFKLLE-IGLEMDLPVITHS---DYDSVMKGIIHGACDYLVKPVGLKELQN 124
Query: 129 IWQHVFRKKIHEVRDIENIEGFESI-HMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH 187
IW HV +K I + +S+ +R D+ D +G++ S R+ D E
Sbjct: 125 IWHHVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVND----SGDEDDSDREEDDGEGSE 180
Query: 188 DDRDCGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D GD S T KK RVVWS +LHQKFV AV Q+G DK PKKILDLM++ LTRENVAS
Sbjct: 181 QD---GDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVAS 237
Query: 247 HLQKYRLYLTRLQKDE 262
HLQKYRLYL ++ + +
Sbjct: 238 HLQKYRLYLKKIDEGQ 253
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 135/188 (71%), Gaps = 3/188 (1%)
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLE VGLEMDLPVIM+S + + VMKGV HGACDYL+KP+R++ELRNIWQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGED-LTSVRKRKDAEN-RHDDR 190
V R+K V EN +S SG Q P ++ T+VRKRKD EN D
Sbjct: 61 VIRRKKF-VSKNENKSADQSKPNQASGEGQGGAIPDNGDQNGKTNVRKRKDDENVSEDGN 119
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
+ D ++ KK RVVWSI+LH+KFV AVNQ+G +K PK+ILDLMNV LTRENVASHLQK
Sbjct: 120 ENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENVASHLQK 179
Query: 251 YRLYLTRL 258
YRLYL R+
Sbjct: 180 YRLYLKRI 187
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/267 (49%), Positives = 171/267 (64%), Gaps = 34/267 (12%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
+E G D F P G+RVL VDDD L +LE +L++C Y VTT A ALS+LRE
Sbjct: 3 VEQGIGDSNIDQF-PIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLREN 61
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +G+ VMKG+ HGACDYLLKP
Sbjct: 62 KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKP 121
Query: 121 IRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
+R++EL+NIWQHV R++ ++ +D + + + GS +++ L +KR
Sbjct: 122 VRIEELKNIWQHVIRRRKYDNKDRNSSDNRDK---PNQGSSEAIPDQKLN-------KKR 171
Query: 181 K---------DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
K EN H++ D ++ KK RV LH+KFV AVNQ+G DK PKKIL
Sbjct: 172 KDQNEDEDEDRDENEHENE---DPATQKKPRV-----LHRKFVAAVNQLGIDKAVPKKIL 223
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRL 258
DLMNV LTREN KYRLYL R+
Sbjct: 224 DLMNVEKLTREN------KYRLYLKRI 244
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 167/259 (64%), Gaps = 16/259 (6%)
Query: 1 MENGFSSPRND-TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M + + +P D T P GLRVL VDD++ LKIL +L++C Y+VT A +AL +LRE
Sbjct: 130 MSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRE 189
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
++ +DIVI+DV MPDMDGF LL+ +GLEMD+PVIM SV+ + S V+KG++HGA DYLLK
Sbjct: 190 NRENFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLK 249
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
P+R+ E++NIWQHV RK + F+S + G + + ++ +
Sbjct: 250 PVRVLEIKNIWQHVVRKNL-----------FDS---GKPGVKEEKAMEMEKSKEKGGGEE 295
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPW 238
++ E+ + D S KK R+ W+ +LH KF+ A++Q+ DK PKKIL++MN P
Sbjct: 296 EEEEEDHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPG 355
Query: 239 LTRENVASHLQKYRLYLTR 257
L+RENVASHLQKYR L +
Sbjct: 356 LSRENVASHLQKYRKMLRK 374
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 166/264 (62%), Gaps = 27/264 (10%)
Query: 1 MENGFSSPRND-TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M + + +P D T P GLRVL VDD++ LKIL +L++C Y+VT A +AL +LRE
Sbjct: 138 MSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRE 197
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
+ +DIVI+DV MPDMDGF LL+ +GLEMD+PVIM SV+ + S V+KG++HGA DYLLK
Sbjct: 198 NRXNFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLK 257
Query: 120 PIRMKELRNIWQHVFRKKIHE-----VRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDL 174
P+R+ E++NIWQHV RK + + V++ + +E +S G ++ D P
Sbjct: 258 PVRVLEIKNIWQHVVRKNLFDSGKPGVKEEKAMEMEKSKEKEGGGEEEEEDHP------- 310
Query: 175 TSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDL 233
+ D S KK R+ W+ +LH KF+ A++Q+ DK PKKIL++
Sbjct: 311 -------------KEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEI 357
Query: 234 MNVPWLTRENVASHLQKYRLYLTR 257
MN P L+RENVASHLQKYR L +
Sbjct: 358 MNEPGLSRENVASHLQKYRKMLRK 381
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 138/205 (67%), Gaps = 5/205 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD LK+LE +L+KC Y VTT A +AL++LRE ++ +D+VISDVNMP
Sbjct: 16 PVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMP 75
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D+DGFKLLE VGLEMDLPVIM+S G+T VMKGV HGACDYLLKP+R++EL+NIWQHV
Sbjct: 76 DIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVV 135
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R+K + RD E G Q + ++ +KRKD + ++ +
Sbjct: 136 RRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSDEEEEGGEEN 195
Query: 195 A-----SSTKKARVVWSIDLHQKFV 214
S+ KKARVVWS++LH+KFV
Sbjct: 196 EDDEDPSAQKKARVVWSVELHRKFV 220
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 134/188 (71%), Gaps = 5/188 (2%)
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMDGFKLLEHVGLEMDLPVIMMS D + VMKGV HGACDYL+KP+RM+ L+NIWQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVD--GPLLTGEDLTSVRKRKDAENRHDDR 190
V RKK +E ++ E + R + VD G + S ++RK+ E +
Sbjct: 61 VVRKKKYEWKEKEQEQSGSVEDGERQPKQEDVDYSSSANEGNNWKSSKRRKEDE---EGE 117
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D D S+ KK RVVWS++LHQ+FV AVNQ+G DK PKKIL+LM+VP L+RENVASHLQK
Sbjct: 118 DKEDTSTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPGLSRENVASHLQK 177
Query: 251 YRLYLTRL 258
YRLYL RL
Sbjct: 178 YRLYLKRL 185
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 168/275 (61%), Gaps = 14/275 (5%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
GL ++VVDDD+ L I+ +LK YEV T A+DAL+ LR R + + ++++DV+MP+M
Sbjct: 20 GLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEM 79
Query: 77 DGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF-- 134
DGF+ V E LPV+MMS D + S +++G++ GA Y++KP+ +L+N+WQ+
Sbjct: 80 DGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVGX 139
Query: 135 -RKKIHEV-RDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT---SVRKRKDAENRHDD 189
+ K H V ++IE +G + T + +S L+ E S RK N +
Sbjct: 140 KKGKSHIVMQEIERTQGASXLEKTSNNEVES----LMNEEKHNKRDSKRKTLKKTNEGNG 195
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
++ + + KKA+V+W+ LH +F++A +IG ++ PK+IL++MNVP LTRENVASHLQ
Sbjct: 196 KEKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVASHLQ 255
Query: 250 KYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASF 284
KYR++L R+ + +S G I K+ + +SF
Sbjct: 256 KYRIFLKRVME---TSSSGTITGKNISERTLRSSF 287
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 158/253 (62%), Gaps = 4/253 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++L+VDDD L I+ MLK CS +V T DALS L+ +D+VI+D++MP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF-RK 136
G +L + + E +PV++MS DG+ S +++ ++ GA Y++KP+ +++L+N+WQ+ K
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 137 KIHEV---RDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
K EV + EN +G S + + + + E+ + +K+ R D+
Sbjct: 141 KGKEVVVAEEPENNDGEASASTEKDSCEDNNSASVSANEESNNKKKKGKKRARDHDQGED 200
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
S+ KKA+VVW+ LH +F++A+N IG DK PK+IL+ MNVP LTRENVASHLQKYRL
Sbjct: 201 APSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENVASHLQKYRL 260
Query: 254 YLTRLQKDELKTS 266
+L ++ + L +S
Sbjct: 261 FLKKVAERGLWSS 273
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/262 (48%), Positives = 154/262 (58%), Gaps = 29/262 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA LRVLVVDDD L ILE+ML C Y R K+G+DIVISDV+MP
Sbjct: 25 PANLRVLVVDDDPTCLMILERMLMTCLYREQ-----RAHCLCFGRTKNGFDIVISDVHMP 79
Query: 75 DMDGFKLLEHVGLEMDLP----------VIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
DMDGFKLLEHVGLEMDLP VI+MS D S V+KGV HGA DYL+KP+R++
Sbjct: 80 DMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADDSKSVVLKGVTHGAVDYLIKPVRIE 139
Query: 125 ELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV------- 177
L+NIWQHV RKK +E E+ G SI T D+ + +SV
Sbjct: 140 ALKNIWQHVVRKKRNEWNVSEHSGG--SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRS 197
Query: 178 -RKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
RKRK+ E D D+SS KK RVVWS++LHQ+FV AVNQ+G D K LM++
Sbjct: 198 SRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDS--ELKTCLLMHL 255
Query: 237 PWLTRENVASHLQKYRLYLTRL 258
++ N+ QKYR+YL RL
Sbjct: 256 -CVSIGNIV-EFQKYRIYLRRL 275
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 161/266 (60%), Gaps = 23/266 (8%)
Query: 5 FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGY 64
++ +N +F GL V+ VDDD L+I+++M KC Y V T A DAL+ + E KD
Sbjct: 1 MATEQNVSFQFEGLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRI 60
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
D+++ DV++P+MDG++ L+H+ E+D+PVI+MSVDG TS V K + HGACDY KP
Sbjct: 61 DVILVDVHLPNMDGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSEN 120
Query: 125 ELRNIWQHVFRKKIHEVR-DIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDA 183
+ + +W+HV K +E + ++ F S +D L ++++S K D
Sbjct: 121 QFKIMWKHVAMKAWNEKKLQKKDFSEFAS---------SVLDANLKDQKEISSNSKESDV 171
Query: 184 ENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
+ DC + KK R+ W +LH +FVKAV IG DK PKKIL++MN+P LT+++
Sbjct: 172 D------DCD--AQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDH 223
Query: 244 VASHLQKYRLYLTR-----LQKDELK 264
VASHLQKYR L + +Q++E++
Sbjct: 224 VASHLQKYRFDLKKSNEVAVQQNEMQ 249
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 140/224 (62%), Gaps = 30/224 (13%)
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPD+DGFKLLE + E++LPV+MMS + ++S V++G+ HGA DYLLKP+R++ELRNIWQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 133 VFRKKIHEVRDIENIEGFE----SIHMTRSGSDQSVDGPLLTGEDLTSVRKR-------- 180
V R+ + R+ + +G S + SGSD + + S + R
Sbjct: 61 VVRRD-YSARNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAANEAGSSKARKKPAGKKG 119
Query: 181 ------KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLM 234
K+AE + D D S+KK RVVWS +LH +FV AVNQ+G DK PK+ILDLM
Sbjct: 120 AKGSKEKEAERKGDAID-----SSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILDLM 174
Query: 235 NVPWLTRENVASHLQKYRLYLTRLQKDEL------KTSVGGIKQ 272
+ LTRENVASHLQKYRLYL RLQ ++L +S GG+ Q
Sbjct: 175 GIQGLTRENVASHLQKYRLYLKRLQGNDLMRNGSNASSSGGVSQ 218
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 5/248 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLV+DDD ++L ++E +L KCSY+VTT R+A+ + + D+VISD P
Sbjct: 8 PYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFP 67
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DG +L+ V + +P ++M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+F
Sbjct: 68 TEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIF 127
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR---- 190
RK++ + ++ + E S + P T T DD
Sbjct: 128 RKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYN 187
Query: 191 -DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
+ D +K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 188 GEITDIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 247
Query: 250 KYRLYLTR 257
KYR+ L +
Sbjct: 248 KYRMQLKK 255
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 151/251 (60%), Gaps = 7/251 (2%)
Query: 5 FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGY 64
+P+ D F P GL V+ +DDD L +LE ++ KC Y VTT A L +LR+ + +
Sbjct: 68 LGTPQGDRF-PVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKF 126
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVI--MMSVDGETSRVMKGVQHGACDYLLKPIR 122
D++ISDVN+PDMDGFKLLE VGL+MDLP I + + + + V GAC+YL KPIR
Sbjct: 127 DLLISDVNIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIR 186
Query: 123 MKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
++EL+NIW+HV R +I + E Q++ T +++ +KRK+
Sbjct: 187 IEELQNIWKHVLRMRIDSKDKNKTFANEEKASYMAGECSQAMAPKNNTDQNIKLGQKRKE 246
Query: 183 AENRHDDRDCGDAS----STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
++ + + + K R+VW ++LH+KF+ AV+ +G DK PK+ILDLMNV
Sbjct: 247 QSEDEEEEEYHKENEEHLNQNKPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEG 306
Query: 239 LTRENVASHLQ 249
LTRENVASHLQ
Sbjct: 307 LTRENVASHLQ 317
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 152/261 (58%), Gaps = 31/261 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLV+DDD ++L ++E +L KCSY+VTT R+A+ + + D+VISD P
Sbjct: 8 PYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFP 67
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DG +L+ V + +P ++M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+F
Sbjct: 68 TEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 135 RKKIHEVRDIENIEGFE--------------SIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
RK++ + ++ + E + TRS + ++ PL R
Sbjct: 128 RKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPL-------ENEVR 180
Query: 181 KDAENRH----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
D N + D RD G K+R+ W+ LH++F+ AVN +G DK PKKIL +M V
Sbjct: 181 DDMVNYNGEITDIRDLG------KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKV 234
Query: 237 PWLTRENVASHLQKYRLYLTR 257
LTRE VASHLQKYR+ L +
Sbjct: 235 KHLTREQVASHLQKYRMQLKK 255
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 152/261 (58%), Gaps = 31/261 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLV+DDD ++L ++E +L KCSY+VTT R+A+ + + D+VISD P
Sbjct: 8 PYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFP 67
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DG +L+ V + +P ++M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+F
Sbjct: 68 TEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 135 RKKIHEVRDIENIEGFE--------------SIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
RK++ + ++ + E + TRS + ++ PL R
Sbjct: 128 RKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPL-------ENEVR 180
Query: 181 KDAENRH----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
D N + D RD G K+R+ W+ LH++F+ AVN +G DK PKKIL +M V
Sbjct: 181 DDMVNYNGEITDIRDLG------KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKV 234
Query: 237 PWLTRENVASHLQKYRLYLTR 257
LTRE VASHLQKYR+ L +
Sbjct: 235 KHLTREQVASHLQKYRMQLKK 255
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 148/244 (60%), Gaps = 18/244 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLR+LV D+D + L++LE L+K Y+VT C A+ LR ++ +DI I N
Sbjct: 36 PEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQGNNS 95
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D D F+ L +G EMDLP+I++S D VMK + +GA DYL+KPI+ +ELR I++H+
Sbjct: 96 DGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIFKHLV 155
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGS--DQSVDGPLLTGEDLTSVRKRK-------DAEN 185
KK+ E R + E E +S S D ++ P + RKR + E+
Sbjct: 156 -KKVRERRSVVTGEAEEKAGGEKSSSVGDSTIRNP--------NKRKRSMCLDAEVNEED 206
Query: 186 RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
RHD D A+S+KK RVVW+ +LH+KFV AV +G DK PKKIL+LMNV L+RENVA
Sbjct: 207 RHDHNDRACAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSRENVA 266
Query: 246 SHLQ 249
SHLQ
Sbjct: 267 SHLQ 270
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 140/240 (58%), Gaps = 53/240 (22%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VD D L LE L+ C Y VTT A+ AL++LRE KD +D+VI+DV++P
Sbjct: 9 PIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLP 68
Query: 75 DMDGFKLLEHVGLEMDLP-VIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
DMDG KLLE V LE DLP V+M+S + VMK V HGA D+L+KP+R++EL+ IWQHV
Sbjct: 69 DMDGLKLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQHV 128
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
RKK +D
Sbjct: 129 IRKK----------------------------------------------------KDNE 136
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
D S+ KK++ VWS++LH KFV AVNQ+G DK P+KIL LMNV +TRE+VASHL+KYRL
Sbjct: 137 DLSAQKKSQSVWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDVASHLRKYRL 196
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 151/261 (57%), Gaps = 31/261 (11%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLV+DDD ++L ++E +L KCSY+VTT R+A+ + + D+VISD P
Sbjct: 8 PYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFP 67
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DG +L+ V + +P ++M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+F
Sbjct: 68 TEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 135 RKKIHEVRDIENIEGFE--------------SIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
RK++ + ++ + E + TRS + ++ PL R
Sbjct: 128 RKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPL-------ENEVR 180
Query: 181 KDAENRH----DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNV 236
D N + D RD G K+R+ W+ LH++F+ AVN + DK PKKIL +M V
Sbjct: 181 DDMVNYNGEITDIRDLG------KSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKV 234
Query: 237 PWLTRENVASHLQKYRLYLTR 257
LTRE VASHLQKYR+ L +
Sbjct: 235 KHLTREQVASHLQKYRMQLKK 255
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 142/244 (58%), Gaps = 62/244 (25%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+RVL VDDD L +LE +L+ C Y VTT A AL++L+E D +D+VI++V+MP
Sbjct: 9 PIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEVHMP 68
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDG KLLE VGLEMDLPVIM+S GET VMK + HGA D+LLKP+
Sbjct: 69 DMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPV------------- 115
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
++ E+R+I H+ R+
Sbjct: 116 --RLEELRNIWQ-------HVIRN------------------------------------ 130
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
K+++ VWS++LH+KF++ VNQ+G DK PKKI DLMNV +TRE+VA+HLQKYRL+
Sbjct: 131 ----KESQFVWSVELHRKFLETVNQLGVDKAVPKKIFDLMNVENITREDVATHLQKYRLF 186
Query: 255 LTRL 258
L R+
Sbjct: 187 LKRM 190
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 153/257 (59%), Gaps = 17/257 (6%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYE--------VTTCGLARDALSLLRERKDGYDIVIS 69
+++LVVDDD L I+ MLK CSY+ V T DALS LR +K +D+V++
Sbjct: 18 IKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLVVT 77
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D++MP+M+G +L + V E LPVI+MS D +++ ++ GA Y++KPI +L+N+
Sbjct: 78 DLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDLKNV 137
Query: 130 WQHVFRKKIHEVR-DIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV-------RKRK 181
WQ+ K + I+ I G + + + DQ + ++ T++ R K
Sbjct: 138 WQYAVATKTGKYSLSIKEIGGSQE-SSSSTVFDQKISVDEVSSAKSTNIKICNEKDRINK 196
Query: 182 DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
+ + +D++ + KK +VVW+ LH +F++A+N IG DK PK+IL+ M+VP L+R
Sbjct: 197 NRKRTKEDQEVDSQLAPKKPKVVWTNSLHSRFLQAINHIGLDKAVPKRILEFMSVPGLSR 256
Query: 242 ENVASHLQKYRLYLTRL 258
ENVASHLQKYR++L ++
Sbjct: 257 ENVASHLQKYRIFLKKV 273
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 146/236 (61%), Gaps = 3/236 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVLV D+D ++L ILE+ L+K Y+VT C A+ LR ++ +D+ + VN
Sbjct: 39 PEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNA 98
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+ D F+ L +G EMDLP+I++S D V K + +GA DYL+KPIR ++LR +++H+
Sbjct: 99 EGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 135 RKKIHEVRDIENIEGFESI-HMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
KK+ E R + E ++ + S D ++ P + + + + E+RHD D
Sbjct: 159 -KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRS-SCLEAEVNEEDRHDHNDRA 216
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
ASS KK RVVW +LHQ F+ AV+ +G ++ PKKILD+M V +++RENVASHLQ
Sbjct: 217 CASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 103/129 (79%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PAGLRVLVVDDD L+I+EKMLK+C YEVTT +AL LR R+D +DIV+SDV+MP
Sbjct: 12 PAGLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALETLRARRDDFDIVLSDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMDGFKLLEH+ LE+D+PV+MMS + T V++G+ HGA DYLLKP+R++ELRNIWQHV
Sbjct: 72 DMDGFKLLEHIALELDVPVMMMSANCATDVVLRGIIHGAVDYLLKPVRLEELRNIWQHVV 131
Query: 135 RKKIHEVRD 143
R++ +D
Sbjct: 132 RRQREPSKD 140
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 54/69 (78%)
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D D S KK RVVWS +LHQ+FV AVNQ+G DK PK+ILDLM V LTRENVASHLQK
Sbjct: 233 DNDDTSGLKKPRVVWSPELHQQFVTAVNQLGIDKAVPKRILDLMGVQGLTRENVASHLQK 292
Query: 251 YRLYLTRLQ 259
YRLYL RLQ
Sbjct: 293 YRLYLKRLQ 301
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 148/254 (58%), Gaps = 1/254 (0%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G+R+LVV+ D L+I+ KML+ YEVTT A DAL +LRE++D ++++ + +P
Sbjct: 20 PIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILIETRLP 79
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DM+ +++LE +G LP+++ S D S ++ + GA YL+KPI +++N+WQ +
Sbjct: 80 DMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYLMKPIIKNDVKNLWQLTY 139
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
R KI + F S + P T KRK+ E ++D + +
Sbjct: 140 RTKIKTAVSGKGSNSFHGGSSEEKASSVTAGNPSSTMGMTDQKGKRKELEETNNDDEDNN 199
Query: 195 ASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
+ KK ++VW+ +LH +F++A+ +G D PKKIL MNVP L +ENV+SHLQKYRL
Sbjct: 200 NLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPKKILQHMNVPGLKKENVSSHLQKYRL 259
Query: 254 YLTRLQKDELKTSV 267
YL R Q LKT +
Sbjct: 260 YLKREQDAMLKTMI 273
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 156/266 (58%), Gaps = 17/266 (6%)
Query: 30 LKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEM 89
L I+ +L+ Y+V T DAL+ LR D + +V++DV+MP++DGF+ + V E
Sbjct: 34 LSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEEF 93
Query: 90 DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEG 149
LPV+MMS D + S ++KG++ GA Y++KP+ +L+NIWQ+ + D++++
Sbjct: 94 QLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDV-- 151
Query: 150 FESIHMTRSGSDQSVDGPLLTGEDLTSV----RKRKDAENRHDDR---DCG----DASST 198
S +++ D P+ E ++SV + ++D + + R D G DA S
Sbjct: 152 -GPAPEEESPVEKTPDDPVDI-ESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSP 209
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+ +VVW+ LH +F++AV +IG ++ PK+IL+LMN+P LTRENVASHLQKYR++L R+
Sbjct: 210 KRTKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRV 269
Query: 259 QKDELKTSVGGIKQKDSPSKDSAASF 284
E S G K + +SF
Sbjct: 270 A--EASNSTGSSTGKRIAERTLRSSF 293
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 150/263 (57%), Gaps = 9/263 (3%)
Query: 30 LKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEM 89
L I+ +L+ Y+V T DAL+ LR D + +V++DV+MP++DGF+ + V E
Sbjct: 34 LSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEEF 93
Query: 90 DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENI-E 148
LPV+MMS D + S ++KG++ GA Y++KP+ +L+NIWQ+ + D++++
Sbjct: 94 QLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVGP 153
Query: 149 GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR---KDAENR---HDDRDCGDASSTKKAR 202
E D VD ++ + + KR K A R ++ DA S K+ +
Sbjct: 154 APEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENSDAVSPKRTK 213
Query: 203 VVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDE 262
VVW+ LH +F++AV +IG ++ PK+IL+LMN+P LTRENVASHLQKYR++L R+ E
Sbjct: 214 VVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRIFLRRVA--E 271
Query: 263 LKTSVGGIKQKDSPSKDSAASFG 285
S G K + +SF
Sbjct: 272 ASNSTGSSTGKRIAERTLRSSFA 294
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 154/282 (54%), Gaps = 32/282 (11%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYE--------VTTCGLARDALSLLRERKDGYDIVIS 69
+ +L+VDDD L ++ LK SY+ V T DALS+LR +K +D+V+S
Sbjct: 17 IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVS 76
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D++MP+M+G +L + V E LPVI+MS D + + + ++ GA Y++KP +L+N+
Sbjct: 77 DLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDLKNV 136
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSV---------RKR 180
W + K I+ IEG +R S S L+ ED+ S RK
Sbjct: 137 WHYAVAIKTGNSLSIKEIEG------SREPSYSSTLVERLSLEDVNSATSINDEKRYRKN 190
Query: 181 KDAENRH---DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 237
E R DD++ ++KK +VVW+ LH +F+ A+N IG DK PK+IL+ M+V
Sbjct: 191 GRKEERKSTKDDQEVDSQPASKKPKVVWTNSLHNRFLLALNHIGLDKAVPKRILECMSVR 250
Query: 238 WLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKD 279
L+REN+ASHLQKYR++L ++ + GG K+ +D
Sbjct: 251 GLSRENIASHLQKYRIFLKKVAER------GGCSSKNLSGRD 286
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 139/221 (62%), Gaps = 15/221 (6%)
Query: 1 MENGFSSPRND-TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
M + + +P D T P GLRVL VDD++ LKIL +L++C Y+VT A +AL +LRE
Sbjct: 1 MSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRE 60
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
++ +DIVI+DV MPDMDGF LL+ +GLEMD+PVIM SV+ + S V+KG++HGA DYLLK
Sbjct: 61 NRENFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLK 120
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
P+R+ E++NIWQHV RK + F+S + G + + ++ +
Sbjct: 121 PVRVLEIKNIWQHVVRKNL-----------FDS---GKPGVKEEKAMEMEKSKEKGGGEE 166
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQI 220
++ E+ + D S KK R+ W+ +LH KF+ A++Q+
Sbjct: 167 EEEEEDHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQL 207
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 138/241 (57%), Gaps = 4/241 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +L+VDDD L I+ ML+ C Y+V T +AL LR RK +D+V++D++MP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
G +L + V E LPVIMMS D + S ++K ++ G Y++KPI + +++++WQ+ K
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASS 197
I N I S S + +++ + R + +
Sbjct: 129 ----NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSINIP 184
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
+K++V+W+ LH +F++A+ IG K PKKIL+ MNVP LTRENVASHLQKYR++L R
Sbjct: 185 IRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKR 244
Query: 258 L 258
+
Sbjct: 245 V 245
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 138/241 (57%), Gaps = 4/241 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +L+VDDD L I+ ML+ C Y+V T +AL LR RK +D+V++D++MP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
G +L + V E LPVIMMS D + S ++K ++ G Y++KPI + +++++WQ+ K
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASS 197
I N I S S + +++ + R + +
Sbjct: 129 ----NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNNKAKQNSINIP 184
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
+K++V+W+ LH +F++A+ IG K PKKIL+ MNVP LTRENVASHLQKYR++L R
Sbjct: 185 IRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASHLQKYRIFLKR 244
Query: 258 L 258
+
Sbjct: 245 V 245
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 57/302 (18%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYE----VTTCGL----------------------- 49
+RV+VVDDD+ L I+ MLK Y+ V C
Sbjct: 20 AIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSS 79
Query: 50 ------ARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETS 103
A DAL LR R + + +V++DV+MP MDGF+ + V E +LPV+MMS D + S
Sbjct: 80 VVSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKES 139
Query: 104 RVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS 163
+++G++ GA Y++KP+ +L+++WQ+ R GS
Sbjct: 140 SILRGLEAGAAFYIVKPVNYDDLKDLWQYALS--------------------PRKGSVSV 179
Query: 164 VDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD 223
+ D S +K N ++++ +A +K++VVW+ LH F++A+ +IG +
Sbjct: 180 XHEEMQNKRD--SKKKAGKKVNEGNEQEKSEAIVPRKSKVVWTTALHNDFLEAIRKIGLE 237
Query: 224 KVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAAS 283
+ PK+IL+ MN P LTRENVASHLQKYR++L R+ E +S G K+ K +S
Sbjct: 238 RAVPKRILEHMNEPGLTRENVASHLQKYRIFLKRV--TEASSSDGSSTGKNIIEKTLRSS 295
Query: 284 FG 285
F
Sbjct: 296 FA 297
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 148/255 (58%), Gaps = 4/255 (1%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
G+R+LVV+ D L+I+ KML+ YEVTT A DAL +LRE++D ++++ + ++PDM
Sbjct: 22 GVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHLPDM 81
Query: 77 DGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
D ++++E V + LP+++ S D S ++ + GA YL+KPI +++N+WQ +R
Sbjct: 82 DQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQLTYR 141
Query: 136 KKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLL---TGEDLTSVRKRKDAENRHDDRDC 192
KK F + + S + P L TG+ ++++ E +DD D
Sbjct: 142 KKKKTAVSSVGSNSFHAGLAEENASSVTAGIPSLLSTTGQSDQMGKRKELEETDNDDEDN 201
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
+ + KK +VW+ +LH +F++A+ +G D PKKIL MNV L +ENV+SHLQKYR
Sbjct: 202 DNLTVLKKPELVWTNELHNRFLQAIRILGVDGAHPKKILQHMNVSGLKKENVSSHLQKYR 261
Query: 253 LYLTRLQKDELKTSV 267
L L R Q KT +
Sbjct: 262 LSLKREQDTTQKTMI 276
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 148/254 (58%), Gaps = 5/254 (1%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
AG+ +LVVD D A L I+ KML Y+V T A DAL +LRER+ D+++++V++PD
Sbjct: 17 AGVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPD 76
Query: 76 MDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
MD ++LLE + LP++++S D + + ++ + GA YLLKPI M +++++WQ
Sbjct: 77 MDKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCV 136
Query: 136 KKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDA 195
K E + S+++ + + + +K + E + D+D +A
Sbjct: 137 KNRKNNVATEGSHSYHGHSTPEIASNEASECLSVLDTSQQNAQKSEGKELQEMDKD-EEA 195
Query: 196 SST----KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
+ T KK +++W+ +LH +F++A+ +G D PKKIL MNVP L +EN++SHLQKY
Sbjct: 196 TVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENISSHLQKY 255
Query: 252 RLYLTRLQKDELKT 265
RL L R Q+ KT
Sbjct: 256 RLSLKREQEAIQKT 269
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 96/119 (80%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVLVVDDD+ LKI+ KML+KC Y VT+ + AL LR +K+ +DIV+SDV+MPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
GFKLLE + L++D+PV+MMSV+ + S V++G+ HGA DYLLKP+R+ EL+NIWQHV RK
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRK 130
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 52/61 (85%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
KK RVVWS +LHQ+FV AVNQ+G DK PK+ILDLMNV LTRENVASHLQKYRLYL RL
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASHLQKYRLYLKRL 399
Query: 259 Q 259
Q
Sbjct: 400 Q 400
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 157 bits (397), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/81 (92%), Positives = 76/81 (93%)
Query: 26 DLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHV 85
D WLKILEKMLKKC YEVT CGLARDAL+LLRERKDGYDIVISDVNMPDMDGFKLLE V
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 86 GLEMDLPVIMMSVDGETSRVM 106
GLEMDLPVIMMSVDGETSRVM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 109/167 (65%), Gaps = 20/167 (11%)
Query: 95 MMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIH 154
+MS +G+TS VMKG+ HGACDY +KPIR++ELRNIWQHV R++ G ES+
Sbjct: 14 VMSTNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRR-----------GRESLK 62
Query: 155 --MTRSGSDQSVDGPLLTGEDLTSVRKRKD-AENRHDDRDCGDASSTKKARVVWSIDLHQ 211
+ ++ D P T+ +KRKD + D D SS K+ARV W++ LHQ
Sbjct: 63 DDLGECEDREASDSPE------TTSKKRKDTSSGDFSDEVIDDISSLKRARVHWTVQLHQ 116
Query: 212 KFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
+FV AVNQ+G DK PKKI+++M V L+RENVASHLQKYRLYL RL
Sbjct: 117 QFVVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASHLQKYRLYLKRL 163
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 146/263 (55%), Gaps = 36/263 (13%)
Query: 7 SPRND---TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
SP ND F +RVL+VD D L ++ ++ + SY+VT +A++ L + K
Sbjct: 27 SPINDDDEEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQE 86
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
D+VI D +MPD++G L +G EMDLPV++MS D + VM+ +++GACD+L+KP+
Sbjct: 87 IDLVIWDFHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSK 146
Query: 124 KELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLT---------GEDL 174
+ + +W+HV+RK+ M++SG D+ + + G+D
Sbjct: 147 EVIAVLWRHVYRKR-----------------MSKSGLDKPGESGTVESDPDEYDDLGQDN 189
Query: 175 TSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKIL-- 231
+ ++N D + G+ +TKK R+ W+ +LH KF AV ++G +K PK IL
Sbjct: 190 LYQSNEEGSKNSSDQK--GEKPATKKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKY 247
Query: 232 --DLMNVPWLTRENVASHLQKYR 252
+ MNV LTR NVASHLQKYR
Sbjct: 248 MQEEMNVQGLTRNNVASHLQKYR 270
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 138/248 (55%), Gaps = 24/248 (9%)
Query: 44 VTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETS 103
V T DALS+LR +K +D+V+SD++MP+M+G +L + V E LPVI+MS D +
Sbjct: 16 VVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKN 75
Query: 104 RVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS 163
+ + ++ GA Y++KP +L+N+W + K I+ IEG +R S S
Sbjct: 76 VISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTGNSLSIKEIEG------SREPSYSS 129
Query: 164 VDGPLLTGEDLTSV---------RKRKDAENRH---DDRDCGDASSTKKARVVWSIDLHQ 211
L+ ED+ S RK E R DD++ ++KK +VVW+ LH
Sbjct: 130 TLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPASKKPKVVWTNSLHN 189
Query: 212 KFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIK 271
+F+ A+N IG DK PK+IL+ M+V L+REN+ASHLQKYR++L ++ + GG
Sbjct: 190 RFLLALNHIGLDKAVPKRILECMSVRGLSRENIASHLQKYRIFLKKVAER------GGCS 243
Query: 272 QKDSPSKD 279
K+ +D
Sbjct: 244 SKNLSGRD 251
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 137/266 (51%), Gaps = 67/266 (25%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSY-----------------EVTTCGLARD 52
++ F+P G+RVL++D+ +LKI+ K+L C Y EVT ARD
Sbjct: 17 DEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARD 76
Query: 53 ALSLLRERKDGYDIVISDVNMP-DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQH 111
A+ L E YD+V+++V+ P +DGF LL++ G +MDLPV++ S D + V+K V
Sbjct: 77 AVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNS 136
Query: 112 GACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTG 171
GACDYL+KP+R +EL+NIWQHV+R+K+ RSG
Sbjct: 137 GACDYLVKPLRHEELKNIWQHVYRRKL------------------RSGG----------- 167
Query: 172 EDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
R+ A N + K R W +LH++FV V Q+G DK P +IL
Sbjct: 168 ------RRAAAAGN--------SSKGEIKKRFRWPKELHERFVSVVLQLGVDKATPNQIL 213
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTR 257
L+N LTR+ Q++R+ LT+
Sbjct: 214 PLLNREDLTRD------QRFRIALTK 233
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 146/266 (54%), Gaps = 40/266 (15%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA ++VLV+D D+ L +EK L + +Y+VTTC A++L+ + K +D+V+ + MP
Sbjct: 10 PANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLETQMP 68
Query: 75 DMDGFKLLEHVGLEMDLPVIM-MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
DMD F L+ + ++D+PVIM M +G T+ ++ +++GACD +KP +++ +W H
Sbjct: 69 DMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYMWHHA 128
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCG 193
RK M + Q ++ L G + + +R R D+ +D D
Sbjct: 129 VRK------------------MMKGNKKQKINEQL--GVEGSQIRARDDSNLCLNDEDIP 168
Query: 194 DASSTKKAR------------VVWSIDLHQKFVKAVNQI------GFDKVGPKKILDLMN 235
+ TKK + VVWS++LH++F+KAV ++ K PK IL+ M
Sbjct: 169 EPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKAVPKTILEHMK 228
Query: 236 VPWLTRENVASHLQKYRLYLTRLQKD 261
VP LTRE V SHLQKYRLYL + Q++
Sbjct: 229 VPGLTREQVGSHLQKYRLYLNKHQQE 254
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 130/219 (59%), Gaps = 14/219 (6%)
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MP+MDGF+ V E LPV+MMS D + S +++G++ GA Y++KP+ +L+N+WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 133 VF---RKKIHEV-RDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLT---SVRKRKDAEN 185
+ K H V ++IE +G + T + +S L+ E S RK N
Sbjct: 61 AVGPKKGKSHIVMQEIERTQGASQLEKTSNNEVES----LMNEEKHNKRDSKRKTLKKAN 116
Query: 186 RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
+ ++ + + KKA+V+W+ LH +F++A +IG ++ PK+IL++MNVP LTRENVA
Sbjct: 117 EGNGKEKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVA 176
Query: 246 SHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASF 284
SHLQKYR++L R+ + +S G I K+ + +SF
Sbjct: 177 SHLQKYRIFLKRVMET---SSSGTITGKNISERTLRSSF 212
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 142/255 (55%), Gaps = 17/255 (6%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VLVVD D L + ML+ +Y+V T DAL+++ ERKD D+V+++++MPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 80 KLLEHVGLEMDLPVI------------MMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
+LL+ + LPV+ +MS D E +++ + GA Y+ KP+ M ++
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 128 NIWQHVF-RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLT----GEDLTSVRKRKD 182
N+WQ+VF ++ +++ G + + + SD L++ G + +
Sbjct: 143 NLWQYVFLNRRDKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGYQEPTTDTVET 202
Query: 183 AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
++ D+ D + KKA++ W+ +LH KF+ A+ ++G D PKKIL LM V LT+E
Sbjct: 203 DKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHLMGVEGLTKE 262
Query: 243 NVASHLQKYRLYLTR 257
+++SHLQKYRL + R
Sbjct: 263 HISSHLQKYRLSVKR 277
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 76/118 (64%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VLVVD D L I+ ML+ +YEV T A DAL++ E G D+V+++++MPDM G
Sbjct: 523 VLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAMTLEGGCGVDLVMTELHMPDMYGL 582
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
LL+ + LPV++MS D ++K ++ GA YL+KP+ M+++ N WQ+VF+++
Sbjct: 583 DLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMEDVTNFWQYVFKRR 640
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%)
Query: 105 VMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSV 164
VMKGV HGACDYL+KP+RM+ L+NIWQHV RKK +E ++ E + R + +
Sbjct: 3 VMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKKYEWKEKEQEQSGSVEESERQPKPEDL 62
Query: 165 DGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDK 224
D E +K ++ + + D S+ KK RVVWS++LHQ+FV AVNQ+G DK
Sbjct: 63 DYSSSANEGNNWKSSKKRKDDDDEGDERDDTSTLKKPRVVWSVELHQQFVTAVNQLGIDK 122
Query: 225 VGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
PKKIL+LM++P LTRENVASHLQKYRLYL RL
Sbjct: 123 AVPKKILELMSIPGLTRENVASHLQKYRLYLKRL 156
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 140/273 (51%), Gaps = 30/273 (10%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ V+VVDDD +L I+ +ML+ Y V + ALS L+ ++D D++I+D MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 78 GFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
G +L + + E +LPV++MS D T++ + + GA ++ KPI +L I+Q
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSN 133
Query: 137 K--------------------------IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLT 170
K + E D+ + + S + S +G ++
Sbjct: 134 KRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVS 193
Query: 171 GEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKI 230
+ RKRK DD + + KK ++ W+ LH F++A+ IG DK PKKI
Sbjct: 194 TDGSRKNRKRKPNGGPSDDGESM-SQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKI 252
Query: 231 LDLMNVPWLTRENVASHLQKYRLYLTRLQKDEL 263
L M+VP+LTRENVASHLQKYR++L R+ + L
Sbjct: 253 LAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 285
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 141/254 (55%), Gaps = 15/254 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P VLVVD + L +++++K+ +Y+V+ A AL+ L K +IVI D +MP
Sbjct: 31 PGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMP 90
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG + L+ + ++DLPV++MS D +T VMK +GACDY++KP++ + + NIWQH+
Sbjct: 91 GIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIV 150
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDA-----ENRHDD 189
RK++ D+ MT S Q V L+ + L R D+ N +
Sbjct: 151 RKRLIFKPDV----APPKPRMTWSEVFQPVQSHLVPTDGLD--RDHFDSITINGGNGIQN 204
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDL---MNVPWLTRENVA 245
+ +K R+ W+ +LHQKF++A+ I G +K PK +++ M + +TR NVA
Sbjct: 205 MEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVA 264
Query: 246 SHLQKYRLYLTRLQ 259
SHLQK+R+ L Q
Sbjct: 265 SHLQKHRINLEENQ 278
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 4/199 (2%)
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
D++ISDV P D +L+ V + D+P ++MS +G+ S VMK + GA D+L+KP+R++
Sbjct: 12 DLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKPVRIE 71
Query: 125 ELRNIWQHVFRKK-IHEVRDIEN-IEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
L+NIWQHVFRK+ I E R N + + + + + S TG + +
Sbjct: 72 VLKNIWQHVFRKQLIGENRSCSNSAQHLDQVSYPPTIAPASTCATRTTGIITEAATATLE 131
Query: 183 AENRH-DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
+ R + D +K+R+ W+ LH++F+ AVN +G +K PKKIL+ M V LTR
Sbjct: 132 SATRETTNGTVTDIQDLRKSRLSWTTQLHRQFIAAVNSLG-EKAVPKKILETMKVKHLTR 190
Query: 242 ENVASHLQKYRLYLTRLQK 260
E VASHLQKYRL+L +L +
Sbjct: 191 EQVASHLQKYRLHLRKLNQ 209
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 146/270 (54%), Gaps = 42/270 (15%)
Query: 2 ENGFSSPRND---TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLR 58
++G +SP ND F RVL+V D L+ ++ + SY+VT +A++ L
Sbjct: 22 DDGIASPINDDDEEFLTKSNRVLLVGADSN--SSLKNLMTQYSYQVTKYESGEEAMAFLM 79
Query: 59 ERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
+ K D+VI D +MPD++G L +G +MDLPV++MS + + VM+ +++GACD+L+
Sbjct: 80 KNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLV 139
Query: 119 KPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVR 178
KP+ + + +W+HV+RK+ M++SG +D P +G +
Sbjct: 140 KPVSKEVIAVLWRHVYRKR-----------------MSKSG----LDKPGESGTVESDPD 178
Query: 179 KRKDAE--NRHDDRDCG---------DASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVG 226
+ D E N ++ + G + S TKK R+ W+ +LH KF AV ++G +K
Sbjct: 179 EYDDLEQDNLYESNEEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLEKAF 238
Query: 227 PKKILDLM----NVPWLTRENVASHLQKYR 252
PK IL M NV LTR NVASHLQKYR
Sbjct: 239 PKTILKYMQEELNVQGLTRNNVASHLQKYR 268
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 135/239 (56%), Gaps = 19/239 (7%)
Query: 44 VTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETS 103
V T AR AL L+E + +D+VI++ ++ M+G + +H+ + +P+IMMS D S
Sbjct: 17 VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPS 76
Query: 104 RVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQS 163
+ K +++GA Y++KP ++ ++IW++V K ++ IE++ R+ +++
Sbjct: 77 LISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGKKEKLF-IESL-------FVRNEEEET 128
Query: 164 VDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFD 223
P + K E D KK ++VW+ LH+ F+ AVNQIG +
Sbjct: 129 SSEPKNKKKHCKRKSKESQGEK--------DIQVVKKQKLVWTPYLHKMFLLAVNQIGLE 180
Query: 224 KVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAA 282
K PKKIL++MN+P LTRENVASHLQKYR++L + + K V G+ Q+ S+ +++
Sbjct: 181 KAVPKKILEIMNIPNLTRENVASHLQKYRIFLRDVAE---KGMVEGMSQRALESRFASS 236
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 142/281 (50%), Gaps = 38/281 (13%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSY------EVTTCGL--ARDALSLLRERKDGYDIVIS 69
+ V+VVDDD +L I+ +ML+ Y E+ + + ALS L+ ++D D++I+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLIIT 75
Query: 70 DVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
D MP M+G +L + + E +LPV++MS D T++ + + GA ++ KPI +L
Sbjct: 76 DYYMPGMNGLQLKKQITQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTK 133
Query: 129 IWQHVFRKK--------------------------IHEVRDIENIEGFESIHMTRSGSDQ 162
I+Q K + E D+ + + S +
Sbjct: 134 IYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVN 193
Query: 163 SVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGF 222
S +G ++ + RKRK DD + + KK ++ W+ LH F++A+ IG
Sbjct: 194 STNGSCVSTDGSRKNRKRKPNGGPSDDGESM-SQPAKKKKIQWTDSLHDLFLQAIRHIGL 252
Query: 223 DKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDEL 263
DK PKKIL M+VP+LTRENVASHLQKYR++L R+ + L
Sbjct: 253 DKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 293
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 145/286 (50%), Gaps = 54/286 (18%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +LVV+DD +L ++ +LKKC+Y+V T DALS LR + D +D+V++DV+ D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
GF+L + + ++PV++MS D + ++KG LK + + + R+
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKG---------LKGVSVDDQRDQGPCT---A 122
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASS 197
+ R + + G ++ + + G D SV+ L T
Sbjct: 123 LQVKRGKKPVPGKSAMKLGKQGKDNSVNFVLPT--------------------------- 155
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K++++W+ LH F++A++ IGFDK PKKI + M VP L+RENVASH QKYR+YL R
Sbjct: 156 --KSQIIWTDSLHNTFLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASHWQKYRIYLRR 213
Query: 258 LQKDELKTSVGGIKQKDSPSKDSAAS-------------FGIQNSI 290
+ V I ++ + AS FG+Q+S+
Sbjct: 214 VTDASSSIQVPDINLASRANQSTIASGTLGKHRQFHQENFGVQSSV 259
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 93/131 (70%), Gaps = 1/131 (0%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
++ F+P G+RVL++D+ +LKI+ K+L C Y+VT ARDA+ L E YD+V++
Sbjct: 17 DEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLT 76
Query: 70 DVNMP-DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+V+ P +DGF LL++ G +MDLPV++ S D + V+K V GACDYL+KP+R +EL+N
Sbjct: 77 EVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKN 136
Query: 129 IWQHVFRKKIH 139
IWQHV+R+ +
Sbjct: 137 IWQHVYRRNLR 147
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 38/276 (13%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSY------EVTTCGL--ARDALSLLRERKDGYDIVIS 69
+ V+VVDDD +L IL +ML++ Y ++T + + ALS L+ ++D D++I+
Sbjct: 16 INVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLIIT 75
Query: 70 DVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
D MP M+G +L + + E +LPV++MS D ++ + + GA ++ KPI +L
Sbjct: 76 DYYMPSMNGLQLKKQITQEFGNLPVLVMSSD--PNKEQESLSCGAMGFIPKPIEPADLTK 133
Query: 129 IWQHVFRKKIHEVRDI--------ENIEGFESIHMT--------------RSGSD----Q 162
I+Q K++ + N+ + I + S SD
Sbjct: 134 IYQFALTYKMNGKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSDSRTVN 193
Query: 163 SVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGF 222
S +G ++ + RKRK DD + KK ++ W+ LH F++A+ IG
Sbjct: 194 STNGSCVSTDGSRKNRKRKPNGGPSDDGESL-LQPAKKKKITWTDSLHDLFLQAIRHIGL 252
Query: 223 DKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
DK PKKIL MNV +LTRENVASHLQKYR++L R+
Sbjct: 253 DKAVPKKILAFMNVSYLTRENVASHLQKYRIFLRRV 288
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
Query: 95 MMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVR----DIENIEGF 150
++S + ET +MKG++HGACDY++KP+R+++LR IW HV + + R D + +
Sbjct: 15 VLSANSETRTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVKNSRTDPRTSIIDSGSDDDV 74
Query: 151 ESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLH 210
+ + G V + + D H + + S+ KK RV W LH
Sbjct: 75 QKLPSGDGGEGDKVGANRRKKKCSKKNKPAVDVAGGHSE----NTSAQKKPRVQWCGQLH 130
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTS 266
+KFV+AV+QIG DK PKKIL+ MNV +TRENVASHLQKYR+YL +L + L S
Sbjct: 131 RKFVEAVHQIGIDKAVPKKILEAMNVEGITRENVASHLQKYRIYLRKLIEGTLGNS 186
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 49/279 (17%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSY-EVTTCGL--ARDALSLLRERKDGYDIVISDVNMP 74
+ V+VVDD+ +L I +ML+K Y E+T + + ALS L+ ++D D++I+D MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 75 DMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
M+G +L + + E +L V++MS D ++ + + GA ++ KPI +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSD--PNKEEESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGP---LLTGEDLTSVR-KRKDAENRHDD 189
K + G ++ ++ D +V P +L E ++ K+K+ ++ D
Sbjct: 134 LTYKRN---------GKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDT 184
Query: 190 R----------------------------DCGDASST--KKARVVWSIDLHQKFVKAVNQ 219
R D G++ S KK ++ W+ L F++A+
Sbjct: 185 RTVNSTNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKKKIWWTNPLQDLFLQAIQH 244
Query: 220 IGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
IG+DKV PKKIL +MNVP+LTRENVASHLQKYRL++ R+
Sbjct: 245 IGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 49/279 (17%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSY-EVTTCGL--ARDALSLLRERKDGYDIVISDVNMP 74
+ V+VVDD+ +L I +ML+K Y E+T + + ALS L+ ++D D++I+D MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 75 DMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
M+G +L + + E +L V++MS D ++ + + GA ++ KPI +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSD--PNKEEESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGP---LLTGEDLTSVR-KRKDAENRHDD 189
K + G ++ ++ D +V P +L E ++ K+K+ ++ D
Sbjct: 134 LTYKRN---------GKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDT 184
Query: 190 R----------------------------DCGDASST--KKARVVWSIDLHQKFVKAVNQ 219
R D G++ S KK ++ W+ L F++A+
Sbjct: 185 RTVNSTNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKKKIWWTNPLQDLFLQAIQH 244
Query: 220 IGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
IG+DKV PKKIL +MNVP+LTRENVASHLQKYRL++ R+
Sbjct: 245 IGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 68/301 (22%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSY-----EVTTCGLARDALSLLRERKDGYDIVISDVN 72
L VL+VD D LK L +L++ SY +TT LA ALS+++E+ D +D+V+++V+
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMD F L HV L+M++ VI MS S K + GAC +L KPI +L+ +WQH
Sbjct: 79 MPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYMWQH 137
Query: 133 VFR------KKIHEVRDIEN---------IEGFESIHMTRS------------------- 158
V+R K+ ++ IE I+ +++ ++RS
Sbjct: 138 VYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYKPMEN 197
Query: 159 ---------GSDQSVDGPLLTG----EDLTSVRKRKDA--------------ENRHDDRD 191
GS S+ G G +D+ + + K + H+ R
Sbjct: 198 KEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPTKFGFSRIDEDHERRK 257
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
+S + RVVW+ + +KF A+N++G DK PK IL +MN P LT VA+HLQKY
Sbjct: 258 EYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQVANHLQKY 316
Query: 252 R 252
+
Sbjct: 317 K 317
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 42/235 (17%)
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
+K +D+++ D MP+MD ++HV L++ +P IMM+VD + +MK ++ GAC+Y K
Sbjct: 35 KKCCFDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTK 94
Query: 120 PIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRK 179
P+ K+ + +WQHV RK + E ++ + G + +
Sbjct: 95 PLIEKKFKTMWQHVARKGMPENKEYA-----------------------IVGSSMVQANR 131
Query: 180 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
++ E D D + K AR WS +LHQ+F+ AVNQ+G DK PKKI +M+VP +
Sbjct: 132 KRGRE----DADASKETHAKTARFSWSPELHQRFLWAVNQLGLDKATPKKIQKIMDVPNM 187
Query: 240 TRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHH 294
T+E+V KYR Y+ K K + G +K K + F Q S+ V H
Sbjct: 188 TKEHV-----KYRNYI----KSSTKETKGRMK------KSKMSPFETQFSLEVTH 227
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 68/301 (22%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYE-----VTTCGLARDALSLLRERKDGYDIVISDVN 72
L VL+VD D LK L +L++ SY +TT LA ALS+++E+ D +D+V+++V+
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 73 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
MPDMD F L HV L+M++ VI MS S K + GAC +L KPI +L+ +WQH
Sbjct: 79 MPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYMWQH 137
Query: 133 VFR------KKIHEVRDIEN---------IEGFESIHMTRS------------------- 158
V+R K+ ++ IE I+ +++ ++RS
Sbjct: 138 VYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYKPMEN 197
Query: 159 ---------GSDQSVDGPLLTG----EDLTSVRKRKDA--------------ENRHDDRD 191
GS S+ G G +D+ + + K + H+ R
Sbjct: 198 KEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPTKFGFSRIDEDHERRK 257
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
+S + RVVW+ + +KF A+N++G DK PK IL +MN P LT VA+HLQKY
Sbjct: 258 EYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQVANHLQKY 316
Query: 252 R 252
+
Sbjct: 317 K 317
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 37/215 (17%)
Query: 54 LSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGA 113
++ L + K D+VI D +MPD++G L +G +MDLPV++MS + + VM+ +++GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 114 CDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGED 173
CD+L+KP+ + + +W+HV+RK+ M++SG +D P +G
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKR-----------------MSKSG----LDKPGESGTV 99
Query: 174 LTSVRKRKDAE--NRHDDRDCG---------DASSTKKARVVWSIDLHQKFVKAVNQIG- 221
+ + D E N ++ + G + S TKK R+ W+ +LH KF AV ++G
Sbjct: 100 ESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGS 159
Query: 222 FDKVGPKKILDLM----NVPWLTRENVASHLQKYR 252
+K PK IL M NV LTR NVASHLQKYR
Sbjct: 160 LEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYR 194
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 46/280 (16%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL++++D + ++ L+ Y V+ +ALS + ++ + + + I +V+
Sbjct: 15 PKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESFHVAIVEVSTS 74
Query: 75 DMDG-FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+ +G FK LE DLP IM S S +MK + GA ++L KP+ ++LRNIWQHV
Sbjct: 75 NSNGNFKFLE---TAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQHV 131
Query: 134 FRKKIH---------------------------EVRDIENIEGFESIHMTRSGSDQSVDG 166
K + E R +N+E E++ + + ++
Sbjct: 132 VHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENV--SPAHENEYEQS 189
Query: 167 PLLTGEDLTSVRKRK-------DAEN-----RHDDRDCGDASSTKKARVVWSIDLHQKFV 214
PL S + K AEN RH + G + KK +V W+ +LH+KFV
Sbjct: 190 PLSDKYPAPSTPQLKQGASSDGSAENPNKASRH-HKSYGTKVNRKKMKVDWTPELHKKFV 248
Query: 215 KAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
+AV Q+G D+ P +IL++M V LTR NVASHLQK+R++
Sbjct: 249 QAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMH 288
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 20/170 (11%)
Query: 105 VMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSV 164
+ K +QHGAC Y++KP+R + ++NIW HV RK +R+ N R+ + +
Sbjct: 4 MAKAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVN---------NRNDNPSQI 54
Query: 165 DGPLLTGEDLTSVRKRKDAENRHDDRDCGDAS-------STKKARVVWSIDLHQKFVKAV 217
P+ +D ++ +NR D GD S + KK RV W+ LH KF++A+
Sbjct: 55 GQPVDDEKDDAKHTRKHCKKNRKD----GDGSEKDEVISTQKKQRVEWTRQLHSKFLEAI 110
Query: 218 NQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSV 267
N IG D PKKIL++MNV +T+ENVASHLQK+R+YL + ++ LK S
Sbjct: 111 NHIGMDNAVPKKILEVMNVDGITKENVASHLQKFRMYLKKQKEGTLKYSA 160
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 141/296 (47%), Gaps = 50/296 (16%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL+VL+++ D + L+ Y V+T +ALS + + + I I +V+
Sbjct: 15 PKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESFHIAIVEVSSS 74
Query: 75 D-MDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GFK LE+ DLP IM S + + +MK + GA ++L KP+ +LRNIWQHV
Sbjct: 75 SGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQHV 131
Query: 134 FRKKI------------------------------HEVR---DIENIEGF-ESIHMTRSG 159
K HE R DIE + F ++ H SG
Sbjct: 132 VHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRFVDNDHELSSG 191
Query: 160 SDQ--SVDGPLLT--------GEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDL 209
+D+ + P L G+ E+ H D C + KK +V W+ +L
Sbjct: 192 NDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSD-SCEIRGNQKKIKVDWTPEL 250
Query: 210 HQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR-LQKDELK 264
H+ FVKAV Q+G D+ P +IL+LM V LTR NVASHLQKYR++ + L K+E K
Sbjct: 251 HKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILPKEERK 306
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 127/243 (52%), Gaps = 55/243 (22%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL V+ +D D +L +E+M +C Y+VT C A +AL+LL ERKD +D+++ D +MP
Sbjct: 11 PDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVMLIDAHMP 69
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+MD + ++H ++++PVI ++ V K + +GAC+Y KP+ ++ + +WQHV
Sbjct: 70 NMDAYDFVQHATGQLNIPVI-------SNSVTKSITYGACEYWTKPLYEEQFKIMWQHVA 122
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD 194
RK + E + +++ G L D+ RKR +RD +
Sbjct: 123 RKGLRENKKHKSV------------------GSL----DVQGHRKR--------ERDDDN 152
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
+ KK R++ +F K PK IL +++ L+ +VASHLQKYR Y
Sbjct: 153 VPNVKKPRLM-------QF----------KAKPKVILKRIDIHGLSAGHVASHLQKYRNY 195
Query: 255 LTR 257
L R
Sbjct: 196 LKR 198
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 34/205 (16%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKA 201
+ TRS + ++ PL R D N + + D + K+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGE--ITDIRNLGKS 111
Query: 202 RVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKD 261
R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K
Sbjct: 112 RLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKS 168
Query: 262 ELKTSVGGI--------KQKDSPSK 278
L TS G+ K +D PS+
Sbjct: 169 ILTTSKHGVTLSSTALDKTQDHPSR 193
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 107/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + +K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLRKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D +K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 113/206 (54%), Gaps = 36/206 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ---SIHM-------TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
++ M TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL-- 255
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
Query: 256 ---TRLQKDELKTSVGGIKQKDSPSK 278
T ++ +S K +D PS+
Sbjct: 168 SIPTTSKQGATLSSTALDKTQDHPSR 193
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEIMDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRVQLKK 167
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNSMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKK+L +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSNHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSMLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN++G DK PKK+L +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILSMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 20/198 (10%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSID 208
+ M R+ + + R D N + + D + K+R+ W+
Sbjct: 61 PPSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGE--ITDIRNLGKSRLTWTTQ 118
Query: 209 LHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVG 268
LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKH 175
Query: 269 GI--------KQKDSPSK 278
G+ K +D PS+
Sbjct: 176 GVTLSSTALDKTQDHPSR 193
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M LTRE VASHLQKYR+ L +
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASHLQKYRMQLKK 167
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 23/176 (13%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKA 201
+ TRS + ++ PL R D N + + D + K+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGE--ITDIRNLGKS 111
Query: 202 RVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 112 RLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGQITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + + + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+F+K++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL ++ V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FR ++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FR+++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN + DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++ L NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++E NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 102/173 (58%), Gaps = 17/173 (9%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE--GF 150
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E G
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 151 ESIHMTRSGSDQSVDGPLLTGEDLTSVRK--RKDAENRH----DDRDCGDASSTKKARVV 204
+ + + + T L + R D N + D RD G K+R+
Sbjct: 61 PPSILATARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 115 WTAQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+ ++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN + DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 31/180 (17%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN + DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 39/209 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLEN-------EVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ + Y +
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQVHIKYRMQ 167
Query: 258 LQKDELKTSVGGI--------KQKDSPSK 278
L+K TS G K +D PS+
Sbjct: 168 LKKSIPTTSKHGATLSSTALDKTQDHPSR 196
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein
[Zea mays]
Length = 114
Score = 114 bits (285), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 66/80 (82%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P G++VLVVDDD L +L++ML +C Y+VTTC A AL++LRE + G+D++ISDV+MP
Sbjct: 12 PVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMP 71
Query: 75 DMDGFKLLEHVGLEMDLPVI 94
DMDGF+LLE VGLEMDLPVI
Sbjct: 72 DMDGFRLLELVGLEMDLPVI 91
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NI QH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGI 270
++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ +L+K TS G+
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRM---QLKKSIPTTSKHGV 177
Query: 271 --------KQKDSPSK 278
K +D PS+
Sbjct: 178 TLSSTALDKTQDHPSR 193
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P L VLVVD D L +M C+Y+VTTC A A LL E K D+V+ + MP
Sbjct: 15 PEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMD + + HV ++++ VIMM DG T+ VMK V +GAC++ +KP +++N+WQ V
Sbjct: 75 DMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVA 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGE 172
RK +E + I +S ++ GSD + D LT +
Sbjct: 135 RKVWNENKHDLGILKVKS--QSKRGSDYNADFQPLTKK 170
>gi|240254335|ref|NP_176988.4| pseudo-response regulator 6 [Arabidopsis thaliana]
gi|363548390|sp|Q9C9F6.2|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6;
AltName: Full=Pseudo-response regulator 6
gi|332196644|gb|AEE34765.1| pseudo-response regulator 6 [Arabidopsis thaliana]
Length = 755
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 29/269 (10%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +L++D D A + L ML++ S V + +A ALS++ ++K ++I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
L + L+ D+P+I+++ + +T + AC L KPI +++N+WQHVF KK
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 138 IHEVRDI------EN--------IEGFESIHMTRSGSDQSVDG--PLL-TGEDLTSVRKR 180
E++ I EN IE F + + S S+ G P + T + +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 181 KDAENRH-----------DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKK 229
K N +++ S + + +W+ + H KF+ A++ +G + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 230 ILDLMNVPWLTRENVASHLQKYRLYLTRL 258
IL++MN P LT V SHLQKY+ + ++
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQIDQI 280
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 4/98 (4%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+D F+ GL+VLVVDDD+ L+ILE+ML+ Y VTTC A AL++LRE+KD +DIV+S
Sbjct: 33 SDQFS-TGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFDIVLS 88
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMK 107
D +P M +KLLEHVGLE DLP+IMMS DG T VM+
Sbjct: 89 DARVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMR 126
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P L VLVVD D L +M C+Y+VTTC A A LL E K D+V+ + MP
Sbjct: 15 PEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQMP 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
DMD + + HV ++++ VIMM DG T+ VMK V +GAC++ +KP +++N+WQ V
Sbjct: 75 DMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVA 134
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGE----DLTSVRKRKDA 183
RK +E + I +S ++ GSD + D LT + +L +R+ + A
Sbjct: 135 RKVWNENKHDLGILKVKS--QSKRGSDYNADFQPLTKKSYIMNLALIRQSQKA 185
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 17/165 (10%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ ++ R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 23/168 (13%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE---- 148
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 149 -------GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKA 201
+ TRS + ++ PL R D N + + D + +K+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGE--ITDIRNLRKS 111
Query: 202 RVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 112 RLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLT-SVRKRKDAENRHD----DRDCGDASSTKKARVVWSIDLH 210
S + P T T ++ + E R D + + D +K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
GD+SS KK RVVWS++LH+KFV AVNQ+G DK PKKILDLMNV +TRENVASHLQKYR
Sbjct: 118 GDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASHLQKYR 177
Query: 253 LYLTRLQKD-----ELKTSVGG 269
LYL RL D L + GG
Sbjct: 178 LYLKRLSADASRQANLTAAFGG 199
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSY 42
P G+RVL VDDD LKILE +L +C Y
Sbjct: 23 PVGMRVLAVDDDPTCLKILENLLLRCQY 50
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ---SIHM-------TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
++ M TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSTLAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD----DRDCGDASS 197
+ TRS + ++ PL + E R+D + + D
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------------ENEVRYDMVNYNGEITDIRD 107
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 108 LGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 83/130 (63%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P VLVVD + L +++++K+ +Y+VT A AL+ L K +IVI D +MP
Sbjct: 31 PGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFHMP 90
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG + L+ +G +MDLPV++MS D +T VMK +GACDY++KP++ + + NIWQH+
Sbjct: 91 GIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQHIV 150
Query: 135 RKKIHEVRDI 144
RK + D+
Sbjct: 151 RKILMSKPDV 160
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 185 NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDL---MNVPWLT 240
N + + +A +K R+ W+ DLHQKF++A+ + G +K PK +LD M V +T
Sbjct: 319 NGRQNTEKKEAKKPRKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGIT 378
Query: 241 RENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHN---- 296
R NVASHLQK+R+ L Q E G + P+ S + +I+ + N
Sbjct: 379 RSNVASHLQKHRINLEENQIPEETQEDGWSTAYNRPAPSLQGSDNVNTTISPYLMNGRAV 438
Query: 297 -----DVSNGGYRFSGSNSVVQN 314
+ GY +N V+ N
Sbjct: 439 NQIQQNQYQNGYLTMNNNQVITN 461
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE---- 148
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 149 -------GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD----DRDCGDASS 197
+ TRS + ++ PL + E R+D + + D
Sbjct: 61 PPSILAMARATPATTRSTATEASLSPL-------------ENEVRYDMVNYNGEITDIRD 107
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 108 LGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 155
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 156 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDR-----DCGDASSTKKARVVWSIDLH 210
S + P T T DD + D + K+R+ W+ LH
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWTTQLH 120
Query: 211 QKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 23/168 (13%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE---- 148
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 149 -------GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKA 201
+ TRS + ++ PL R D N + D +K+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGK--ITDIRDLRKS 111
Query: 202 RVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
R+ W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 112 RLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 119/249 (47%), Gaps = 27/249 (10%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV--NMP 74
GL+VL VDDD +L+ L + L++C YEVT +AL L + DG+D V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
MDGF LL +G + VI+ S + +G Q GAC KP+R ++ IWQHV
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR--KDAENRHDDRDC 192
R + E + + S +G L ED R R D+ D
Sbjct: 139 RWR---------RENAAGVVAANANPRPSSEGGHL--EDTPRKRGRGVNDSGKGKGASDG 187
Query: 193 GD----ASSTKKARVVWSIDLHQKFVKAVNQI---GFDKVGPKKILDLMNVP--WLTREN 243
G ++TKK + W+ ++H+ FV AV Q+ G D P I + + V +LT
Sbjct: 188 GGVQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGDT--PNNIREFLEVDGIYLTTTQ 245
Query: 244 VASHLQKYR 252
V+SHLQKYR
Sbjct: 246 VSSHLQKYR 254
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P VLVVD + L +++++K+ +Y+V+ A AL+ L K +IVI D +MP
Sbjct: 31 PGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMP 90
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG + L+ + ++DLPV++MS D +T VMK +GACDY++KP++ + + NIWQH+
Sbjct: 91 GIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIV 150
Query: 135 RKKI 138
RK++
Sbjct: 151 RKRL 154
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
+K R+ W+ +LHQKF++A+ IG + + L M + +TR NVASHLQK+R+ L
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEEN 478
Query: 259 Q 259
Q
Sbjct: 479 Q 479
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P VLVVD + L +++++K+ +Y+V+ A AL+ L K +IVI D +MP
Sbjct: 31 PGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMP 90
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG + L+ + ++DLPV++MS D +T VMK +GACDY++KP++ + + NIWQH+
Sbjct: 91 GIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIV 150
Query: 135 RKKI 138
RK++
Sbjct: 151 RKRL 154
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDL---MNVPWLTRENVASHLQKYRLY 254
+K R+ W+ +LHQKF++A+ IG +K PK +++ M + +TR NVASHLQK+R+
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 255 LTRLQ 259
L Q
Sbjct: 479 LEENQ 483
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P VLVVD + L +++++K+ +Y+V+ A AL+ L K +IVI D +MP
Sbjct: 31 PGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMP 90
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG + L+ + ++DLPV++MS D +T VMK +GACDY++KP++ + + NIWQH+
Sbjct: 91 GIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIV 150
Query: 135 RKKI 138
RK++
Sbjct: 151 RKRL 154
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 199 KKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDL---MNVPWLTRENVASHLQ 249
+K R+ W+ +LHQKF++A+ I G +K PK +++ M + +TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQ 473
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VLVVDD+ + ++L+KC Y VTTC +A+ LLR R ++++++DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDID 109
Query: 78 GFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G KLL+HV LPVIMMS + + V + V+ GA DYLLKP+ +K+++ +WQHV+
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 135 RKK 137
RK+
Sbjct: 170 RKQ 172
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 107 bits (267), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 3/83 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG---YDIVISDV 71
PAGLRVLVVDDD LK+LE+ LK C+Y V AR AL +LRERKD +D+VISDV
Sbjct: 7 PAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDLVISDV 66
Query: 72 NMPDMDGFKLLEHVGLEMDLPVI 94
MP+MDGF+LLE +G+EMDLPVI
Sbjct: 67 VMPNMDGFELLELIGVEMDLPVI 89
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 17/165 (10%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFES--- 152
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 153 ----IHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASSTKKARVV 204
+ M R+ + R D N + D RD G K+R+
Sbjct: 61 PPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEITDIRDLG------KSRLT 114
Query: 205 WSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
W+ LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQ
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +++ +L+KC Y V A ++RER +D+V+++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G +LL + ++PVIMMS V++ +Q GA D+L+KP+R ELRN+WQHV+
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDG 166
R+ + + S H++ +G + S G
Sbjct: 164 RRHAMNSQTNASENNAASNHLSANGGNGSKTG 195
>gi|345286271|gb|AEN79458.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE---- 148
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 149 -------GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN + DK PKKIL +M V LTRE VASHLQ
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 4/127 (3%)
Query: 14 NPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM 73
+PA + VL+VDDD ++ MLKKC+Y+VTT +A++LL ER ++++++DV M
Sbjct: 5 SPADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMM 63
Query: 74 PDMDGFKLLEHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
PD+DG LL +V ++PV+MMS + VM ++ GA DYLLKP+ K ++++W
Sbjct: 64 PDVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMW 123
Query: 131 QHVFRKK 137
HV+R+K
Sbjct: 124 AHVWRRK 130
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
DAS++KK RVVWS++LH+KFV AVNQ+G DK PK+IL+LMNV LTRENVASHLQKYRL
Sbjct: 25 DASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRL 84
Query: 254 YLTRL 258
YL RL
Sbjct: 85 YLRRL 89
>gi|345286267|gb|AEN79456.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 31/172 (18%)
Query: 96 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE---- 151
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 152 ----------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH----DDRDCGDASS 197
+ TRS + ++ PL R D N + D RD G
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPL-------ENEVRDDMVNYNGEITDIRDLG---- 109
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
K+R+ W+ LH++F+ AVN +G DK PK IL +M V LTRE VA HLQ
Sbjct: 110 --KSRLTWTTQLHRQFIAAVNHLGEDKAVPKNILGIMKVKHLTREQVACHLQ 159
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +++ +L+KC Y V A ++R R +D+V+++VNMP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V+K +Q+GA D+L+KP+R ELRN+WQHV+
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 135 RK 136
R+
Sbjct: 158 RR 159
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y V A +L+ER D+++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 78 GFKLLEHV-GLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GF LL + G E ++PVIMMS + S V K + GA DYL+KP+R ELRN+WQHV+
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 135 RKK 137
R++
Sbjct: 181 RRQ 183
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y V A +L+ER D+++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 78 GFKLLEHV-GLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GF LL + G E ++PVIMMS + S V K + GA DYL+KP+R ELRN+WQHV+
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 135 RKK 137
R++
Sbjct: 181 RRQ 183
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Query: 194 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
+ S+ KK RVVWSI+LH+KFV AVNQ+G DK PK+IL+LMNV LTRENVASHLQKYRL
Sbjct: 19 EPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRL 78
Query: 254 YLTRL-----QKDELKTSVGG 269
YL RL Q+ + + GG
Sbjct: 79 YLKRLSAVASQQASIVAAFGG 99
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 20/185 (10%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYE-VTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LRVL+V+ D + +I+ +L+KCSY+ V T A +L+ER D+++++V++P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 77 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+ LL EH + ++PVIMMS V K + GA DYL+KPIR ELRN+WQH
Sbjct: 125 SGYALLTLIMEHE-ICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQH 183
Query: 133 VFRKKIHEVRDIENIEGFESIH-------MTRSGSDQSVDGPLLTGEDLTSVRKRKDAEN 185
V+RK+ ++ G H T + S+ + DG +GE + R ++ A
Sbjct: 184 VWRKQ-------SSLGGGNGPHDESVGQDKTEATSENNADGNHSSGEMASIQRSKEQAVK 236
Query: 186 RHDDR 190
R D +
Sbjct: 237 RSDSQ 241
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 87/127 (68%), Gaps = 4/127 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-YDIVISDVNM 73
P + +L+VDD+ ++ +L+KCSY+VT G +AL +LR + G + ++++DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 74 PDMDGFKLLEHV-GLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
PD+DG +LL HV G E +LPVIMMS + T V + ++ GA DYLLKP+ KE++++W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 131 QHVFRKK 137
QHV+R++
Sbjct: 122 QHVWRRQ 128
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 3 NGFSSPRNDTFNPA-GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERK 61
NG + R D P LRVL+V+ D + +I+ +L+KC Y V A ++RER
Sbjct: 37 NGRALVRWDQILPRRSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERA 96
Query: 62 DGYDIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLL 118
+D+V+++V MP + G +LL + + +PVIMMS V+K +Q GA D+L+
Sbjct: 97 YDFDLVLTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLV 156
Query: 119 KPIRMKELRNIWQHVFRK 136
KP+R EL N+WQHV+R+
Sbjct: 157 KPVRKNELGNLWQHVWRR 174
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + I+ +L+KCSY V + A +++E+ +DI++S+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 78 GFKLLEHV-GLEMD--LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + G E+ +PVIMMS S V K +Q GA D+L+KP+R ELRN+WQHV+
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 135 RK 136
R+
Sbjct: 177 RR 178
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 30/192 (15%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D +I+ +L+KC+Y+V A +L+ R D+++++V++P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL + +E D+ PVIMMS S V K + GA DYL+KPIR+ ELRN+WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDA---ENRHDDR 190
+R++ T+S + ++GP +D + +++ +A N +R
Sbjct: 175 WRRQ------------------TQSAATAGINGP----QDESDTQQKFEATAENNAASNR 212
Query: 191 DCGDASSTKKAR 202
GDA+ ++ +
Sbjct: 213 SGGDAACIQRNK 224
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 44 VTTCGLARDALSLLRERKDGYDIVISDVNMP-DMDGFKLLEHVGLEMDLPVIMMSVDGET 102
VT ARDA+ L E YD+V+++V+ P +DGF LL++ G +MDLPV++ S D +
Sbjct: 6 VTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDK 65
Query: 103 SRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
V+K V GACDYL+KP+R +EL+NIWQHV+R+K+
Sbjct: 66 RTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRKL 101
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 105 VMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
VM+ V +GACDY++KP+ + ++ IW+HV R ++
Sbjct: 155 VMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRL 188
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +++ +L+KC Y V A ++R R +D+V+++V+MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V++ +Q+GA D+L+KP+R ELRN+WQHV+
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDG 166
R+ + + S H++ + ++S G
Sbjct: 138 RRHSMNTQTNASENNAASNHISANSGNRSKTG 169
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+LV D+D L+ + +L KCSY+VT+ AR + L DI+++++++P
Sbjct: 30 SKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDIILAELDLPL 89
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G KLL+++ + DL PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 133 VFRKK 137
V+R++
Sbjct: 150 VWRRR 154
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A LL+ R D+++++V++P +
Sbjct: 49 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHNVDLILTEVDLPSIS 108
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL EH + ++PVIMMS S V K + GA DYL+KPIR ELRN+WQHV
Sbjct: 109 GYALLTLIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHV 167
Query: 134 FRKK-----IHEVRDIENI--EGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENR 186
+R++ I+ ++D E++ + E+ + S++S ++ + K DA++
Sbjct: 168 WRRQSSTTGINGLQD-ESVAQQKVEATAENNAASNRSSGDAACIQRNIELIEKGSDAQSS 226
Query: 187 HDDRDC 192
DC
Sbjct: 227 CTKPDC 232
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A LL+ R D+++++V++P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL EH + ++PVIMMS S V K + GA DYL+KPIR ELRN+WQHV
Sbjct: 110 GYALLTLIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHV 168
Query: 134 FRKK 137
+R++
Sbjct: 169 WRRQ 172
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +++ +L+KC Y V A ++R R +D+V+++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G +LL + ++PVIMMS V+K +Q GA D+L+KP+R ELRN+WQHV+
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 135 RK 136
R+
Sbjct: 175 RR 176
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 6/134 (4%)
Query: 9 RNDTFNPAG-LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIV 67
R D F P LRVL+V+ D + +I+ +L+KCSY V + A +L+ R G D++
Sbjct: 55 RWDGFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLI 114
Query: 68 ISDVNMPDMDGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+++V++P + G+ LL EH + ++PVIMMS S V K + GA DYL+KP+R
Sbjct: 115 LTEVDLPSISGYPLLTIIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRK 173
Query: 124 KELRNIWQHVFRKK 137
ELRN+WQHV+R++
Sbjct: 174 NELRNLWQHVWRRQ 187
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D +I+ +L+KC+Y+V A +L+ R +D+++++V++P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL + +E D +PVIMMS S V K + GA DYL+KPIR+ ELRN+WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 134 FRKK 137
+R++
Sbjct: 164 WRRQ 167
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + L ++L+KCSY+VT AR+ +S+L D+++++V++P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GFK+L+++ L P++MMS E + VMK ++ GA DYL+KP+R+ EL N+W H++
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D+D+ + +L KCSY+VT R + L DI++S+V++P
Sbjct: 18 SKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDIILSEVDLPM 77
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
GFK+L+++ + DL PVIMMS E + V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 78 AKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTNELLNLWTH 137
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDA 183
++R++ +NI E M SD + + L ED T + R+ +
Sbjct: 138 MWRRRRMLGLAEKNILNCEFDPMHSDHSDANTNSTTLFSEDDTEEKSRRSS 188
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D +I+ +L+KC+Y+V A +L+ R +D+++++V++P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL + +E D +PVIMMS S V K + GA DYL+KPIR+ ELRN+WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 134 FRKK 137
+R++
Sbjct: 139 WRRQ 142
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A +L+ R D+++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GF LL V + ++PVIMMS G + V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 135 RKKIHEV 141
R++ V
Sbjct: 160 RRQSSTV 166
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D I+ +L+KCSY V A ++ E+ +DI++S+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 78 GFKLLEHV-GLEMD--LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + G E+ +PVIMMS S V K +Q GA D+L+KP+R ELRN+WQHV+
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 135 RK 136
R+
Sbjct: 193 RR 194
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A +L+ R D+++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
GF LL V + ++PVIMMS G + V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 100 GFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVW 159
Query: 135 RKKIHEV 141
R++ V
Sbjct: 160 RRQSSTV 166
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LR+L+V+ D + +I+ +L+KCSY+V A L+ R D+V+++V +P +
Sbjct: 38 ALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPSI 97
Query: 77 DGFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
GF LL + +E D +PVIMMS + + V+K + GA D+L+KP+R ELRN+WQH
Sbjct: 98 SGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQH 156
Query: 133 VFRKK 137
V+R++
Sbjct: 157 VWRRQ 161
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A +L+ + D+++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL EH + ++PVIMMS S V K + GA DYL+KPIR ELRN+WQHV
Sbjct: 104 GYALLTLIMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHV 162
Query: 134 FRKKIHEVRDIENIEGFESI 153
+R++ R EN ES+
Sbjct: 163 WRRQSSLAR--ENCPQEESV 180
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + ++ +L+KC Y V A +L+E+ D+V+++V +P M
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL EH + ++PVIMMS + S V K + GA D+L+KPIR ELRN+WQHV
Sbjct: 99 GFLLLSTIMEHEACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 157
Query: 134 FRKKI 138
+RK++
Sbjct: 158 WRKQL 162
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 8 PRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLR-ERKDGYDI 66
P + P+ VL+VDD+ +L +L KC Y VT+ +AL LLR D + +
Sbjct: 38 PSSQQGQPSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQL 97
Query: 67 VISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
V++DV MP+++G +LL V + +L PV+MMS + V + VQ GA +YL+KP+
Sbjct: 98 VLTDVCMPELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTK 157
Query: 124 KELRNIWQHVFRKK 137
KE+++IWQHV+RK+
Sbjct: 158 KEVQHIWQHVWRKR 171
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LRVL+V+ D + +I+ +L+KCSY V A +L+ + + D+++++V++P +
Sbjct: 158 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 217
Query: 77 DGFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+ LL + +E D+ PVIMMS + V K + GA DYL+KP+R ELRN+WQH
Sbjct: 218 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 276
Query: 133 VFRKK 137
V+R++
Sbjct: 277 VWRRQ 281
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y+V A +L+E+ D++++++++P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL EH + ++PVIMMS V+K + GA DYL+KP+R EL+N+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LRVL+V+ D + +I+ +L+KCSY V A +L+ + + D+++++V++P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 77 DGFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+ LL + +E D+ PVIMMS + V K + GA DYL+KP+R ELRN+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 133 VFRKK 137
V+R++
Sbjct: 168 VWRRQ 172
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V+ D + KI+ +L+KCSY+V++ +A L+E + D+V+++V +P++
Sbjct: 31 VRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLTEVELPNVS 90
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL + +E D +PVIMMS V + + GA D+L+KPIR ELRN+WQHV
Sbjct: 91 GYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 134 FRKK 137
+R++
Sbjct: 150 WRRQ 153
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+ + +R+L+ D D A + ++++L +CSY+V+ AR + +L D+V+S+V
Sbjct: 9 FDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVE 68
Query: 73 MPDMDGFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
+P+ GFK+L+H+ + +P++MMS E + V+K ++ GA DYL+KP+R+ EL N+
Sbjct: 69 LPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNL 128
Query: 130 WQHVFRKK 137
W H++R++
Sbjct: 129 WTHMWRRR 136
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
F+ + +R+L+ D D A + ++++L +CSY+V+ AR + +L D+V+S+V
Sbjct: 9 FDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVE 68
Query: 73 MPDMDGFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
+P+ GFK+L+H+ + +P++MMS E + V+K ++ GA DYL+KP+R+ EL N+
Sbjct: 69 LPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNL 128
Query: 130 WQHVFRKK 137
W H++R++
Sbjct: 129 WTHMWRRR 136
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + ++ +L+KC Y V A LL+E+ D+V+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEVELPLMS 102
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D +PVIMMS S V K + GA D+L+KPIR ELRN+WQHV
Sbjct: 103 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 134 FRKKI 138
+RK++
Sbjct: 162 WRKQL 166
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y+V A +L+E+ D++++++++P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL EH + ++PVIMMS V+K + GA DYL+KP+R EL+N+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+ D + +I+ +L+KCSY+V A L+E+ + D++++++++P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL EH + ++PVIMMS + + V+K + GA DYL+KP+R EL+N+WQHV
Sbjct: 86 GFALLALVMEHEACK-NIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 134 FRKKIHEVRDIENIEGF 150
+R+ VRD N G
Sbjct: 145 WRRLA--VRDGHNGHGL 159
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LRVL+V+ D + +I+ +L+KCSY V A +L+ + D+++++V++P +
Sbjct: 54 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDLILAEVDLPSI 113
Query: 77 DGFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+ LL + +E D +PVIMMS + V K + GA DYL+KP+R ELRN+WQH
Sbjct: 114 SGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 172
Query: 133 VFRKK 137
V+R++
Sbjct: 173 VWRRR 177
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + I+ +L+KC Y V A +L+E+ D+V+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D +PVIMMS + S V K + GA D+L+KPIR ELRN+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 134 FRKKI 138
+RK++
Sbjct: 162 WRKQL 166
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + I+ +L+KC Y V A +L+E+ D+V+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D +PVIMMS + S V K + GA D+L+KPIR ELRN+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 134 FRKKI 138
+RK++
Sbjct: 162 WRKQL 166
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 23 VDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLL 82
++ D + +I+ +L+KCSY VT A +LR R D+++++V++P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 83 EHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+ + ++PVIMMS S V K + GA DYL+KPIR EL+N+WQHV+RK+
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L KCSY+V A L+ + D+++++V++P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 134 FRK 136
+R+
Sbjct: 154 WRR 156
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + KI+ +L+KC Y+V++ +A L+E+ + D+V+++V +P++
Sbjct: 31 LRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEVELPNVS 90
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL EH + +PVIMMS + V + + GA D+L+KPIR ELRN+WQHV
Sbjct: 91 GYALLSMMMEHETCK-SIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 134 FRKK 137
+R++
Sbjct: 150 WRRQ 153
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y+V A L+E+ D++++++++P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 78 GFKLLEHVGLE----MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL V +E ++PVIMMS + V+K + GA DYL+KP+R EL+N+WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 134 FRKKIHEVRD 143
+R+ H +RD
Sbjct: 160 WRR--HSLRD 167
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY V A L++ + D+++++V++P +
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLIS 100
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL V +E D +PVIMMS S+V+K + GA D+L+KP+R EL+N+WQHV
Sbjct: 101 GYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHV 159
Query: 134 FRKK 137
+R++
Sbjct: 160 WRRQ 163
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VLVVDD+ + +L+KC Y VTT +AL LLR R + ++++DV MP +D
Sbjct: 23 VHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLR-RGTEFHLLLTDVMMPGID 81
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL+ V + D+PVIMMS + + V + +Q+GA DYLLKP+ K ++++WQHV+
Sbjct: 82 GPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVW 141
Query: 135 RK 136
RK
Sbjct: 142 RK 143
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ CSYEVT +A +L + DIV+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVVMPSLS 136
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H+ L+ +PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 137 GIGLLDKIMSHITLKT-IPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 195
Query: 134 FRK 136
+R+
Sbjct: 196 WRR 198
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY V A L+++ D+++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S +K + GA D+L+KPIR ELRN+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 134 FRK 136
+R+
Sbjct: 148 WRR 150
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-KDGYDIV 67
R +F+P VL+ +DD L+I+E++LK+C+Y VT ++AL +L+ K +D++
Sbjct: 7 RTRSFSP---HVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLI 63
Query: 68 ISDVNMPDMDGFKLLEHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
++D+ MP +DG L+ V + LPVI+MS + + K GA DYL+KPIR
Sbjct: 64 LTDIMMPKVDGMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKN 123
Query: 125 ELRNIWQHVFRKKIHEVRDIENIEG 149
E+ +W H++RK + EN+EG
Sbjct: 124 EVATLWHHIWRKVM--AAGTENLEG 146
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A L+ D+++++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 134 FRK 136
+R+
Sbjct: 122 WRR 124
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 24/213 (11%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L VL+V+ D + +I+ +L+KCSY V A L+ D+++++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ LL EH + ++PVIMMS S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 104 GYALLTLVTEHAVCK-NIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHV 162
Query: 134 FRKKIHEV----RDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDD 189
+R++ +++ +E I+ +GS SV S RK KD +
Sbjct: 163 WRRQTLSAGQIPQNLHKVEASSEINAASNGSSDSV----------MSSRKNKDC----SE 208
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGF 222
+ C DA S+ + + H + ++ ++Q+ +
Sbjct: 209 KGC-DAQSSCTTPCLEAESAHMQNMQGLSQMKY 240
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+V+DD + ++ +L+ CSYEVT A +L + ++G D+V+++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 150 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 208
Query: 134 FRK 136
+R+
Sbjct: 209 WRR 211
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ CSYEVT +A L + DIV+++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVVMPSLT 136
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL+ + M L PVIMMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 137 GIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 135 RK 136
R+
Sbjct: 197 RR 198
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY V A L+++ D+++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S +K + GA D+L+KPIR ELRN+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 134 FRK 136
+R+
Sbjct: 148 WRR 150
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V+ D + +I+ +L+ C Y+V A + L++ +D D+V+S+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LLE + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 135 RK 136
R+
Sbjct: 141 RR 142
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + ++ +L+KC Y V A +L+E+ D+V+++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D +PVIMMS S V K + GA D+L+KP+R ELRN+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQHV 162
Query: 134 FRKKI 138
+RK++
Sbjct: 163 WRKQL 167
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 97.1 bits (240), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 8/114 (7%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD---GYDIV 67
DTF PAGLRVL V+ D KILE+ LK C+Y T A+ AL +LRERK+ +D+V
Sbjct: 27 DTF-PAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERKEYGNQFDLV 85
Query: 68 ISDVNM--PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLK 119
IS+V M P+MDGFKLLE +GLEMDLPVI V M + G +++LK
Sbjct: 86 ISNVAMPKPNMDGFKLLELIGLEMDLPVINSEVATRGGNCMSAARGG--NHMLK 137
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+DD + ++ +L+ C Y+V A SLL +R D+V++DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 78 GFKLLE---HVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL H +PV+MMS T+ V K + GA D+L+KP+R EL+N+WQH +
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 135 RK 136
RK
Sbjct: 162 RK 163
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A L+ D+++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 134 FRK 136
+R+
Sbjct: 170 WRR 172
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D+D + + +L KCSY+VT+ AR + L DI++S+V++P
Sbjct: 23 SKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPM 82
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G K+L+++ + DL PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKR 180
++R++ +NI ++ + SD + + L +D + +R
Sbjct: 143 MWRRRHMLGLAEKNILNYDFDPVASDPSDANTNSTTLFSDDTDDLSRR 190
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + S V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 135 RK 136
R+
Sbjct: 203 RR 204
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+DD A ++ +L+ C+YEVT A LL E +D+V++DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + ++ + +P+++MS V + + GACDYL+KP+R EL+N+WQHV
Sbjct: 366 GVGLLSKM-MKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHV 424
Query: 134 FRK 136
+RK
Sbjct: 425 WRK 427
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + S V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 135 RK 136
R+
Sbjct: 203 RR 204
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+ + D + ++ +L+KC Y V A +L+E+ D+V+++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D +PVIMMS S V K + GA D+L+KP+R ELRN+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQHV 162
Query: 134 FRKKI 138
+RK++
Sbjct: 163 WRKQL 167
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+DD A ++ +L+ C+YEVT A LL E +D+V++DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + ++ + +P+++MS V + + GACDYL+KP+R EL+N+WQHV
Sbjct: 246 GVGLLSKM-MKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHV 304
Query: 134 FRK 136
+RK
Sbjct: 305 WRK 307
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 1 MENGFSSPRN----DTF-NPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALS 55
MEN P N D F + + +R+L+ D+D + + +L CSY+VT AR +
Sbjct: 7 MENDEGGPSNARGSDPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVID 66
Query: 56 LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHG 112
L DI++S+V++P G K+L+++ + DL PVIMMS E S V+K ++ G
Sbjct: 67 ALNAEGPDIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLG 126
Query: 113 ACDYLLKPIRMKELRNIWQHVFRKK 137
A DYL+KP+R E+ N+W H++R++
Sbjct: 127 AADYLVKPLRTNEMLNLWTHMWRRR 151
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D +++ +L+KC YEV + A L + ++ D+V+++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQH++
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 135 RK 136
R+
Sbjct: 202 RR 203
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 12/131 (9%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDAL-------SLLRERKDGYDIVISD 70
LRVL+V+ D + +I+ +L+KCSY V + A+ +LR + + D+++++
Sbjct: 112 LRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKPESVDLILTE 171
Query: 71 VNMPDMDGFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
V++P + G+ LL + +E DL PVIMMS + V K + GA DYL+KP+R EL
Sbjct: 172 VDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 230
Query: 127 RNIWQHVFRKK 137
RN+WQHV+R++
Sbjct: 231 RNLWQHVWRRQ 241
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P LRVL+V+ D + I+ +L+ C Y+V A L+ + D+V+++V++P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 75 DMDGFKLLEHVGLEMD------LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+ GF LL + MD +P+IMMS S V K + +GA D+L+KP+R ELRN
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 129 IWQHVFRK 136
+WQHV+R+
Sbjct: 128 LWQHVWRR 135
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y+V A L+ + D+++++V++P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S V K + GA D+L+KP+R ELRN+WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 134 FRK 136
+R+
Sbjct: 152 WRR 154
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+V+DD + ++ +L+ CSY+VT A +L + ++G D+V+++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 133 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 191
Query: 134 FRK 136
+R+
Sbjct: 192 WRR 194
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYEVT +A +L + K D+V+++V+MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 134 FRKKIHEVR 142
+R + H VR
Sbjct: 183 WR-RCHSVR 190
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 11/214 (5%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D+D + + K+L KCSY+V + AR + L DI++S+V++P
Sbjct: 30 SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPM 89
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G K+L+++ + +L PVIMMS E V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRK-------DAEN 185
++R++ +NI +E + SD + + L +D +R A
Sbjct: 150 MWRRRRTLGLAEKNILNYEFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEMGITAPA 209
Query: 186 RHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQ 219
H + + G A++ + V S+ HQ V +++
Sbjct: 210 THQEDEPGIAATIVEPPAVHSVQ-HQPDVPGISE 242
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D ++ +L+KC YEV + DA L + ++ D+V+++V MP +
Sbjct: 83 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 142
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + +PVIMMS + S V K + GA D+L+KPIR EL+ +WQH++
Sbjct: 143 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 202
Query: 135 RK 136
R+
Sbjct: 203 RR 204
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC Y V+ A L+ER D+++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G+ L V +E D +PVIMMS S V+K + G+ D+L+KP+R ELRN+WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 134 FRKKIHEVRDI 144
+R++ I
Sbjct: 163 WRRQTQTAGKI 173
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 11/212 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D + + K+L KCSY+V + AR + L DI++S+V++P
Sbjct: 32 VRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAK 91
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L+++ + +L PVIMMS E V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 92 GMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 151
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRK-------DAENRH 187
R++ +NI +E + SD + + L +D +R A H
Sbjct: 152 RRRRTLGLAEKNILNYEFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEMGITAPATH 211
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQ 219
+ + G A++ + V S+ HQ V +++
Sbjct: 212 QEDEPGIAATIVEPPAVHSVQ-HQPDVPGISE 242
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VLVVDD+ + +L++C Y VT +AL LLR R + ++++DV MP +D
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTEFHMLLTDVMMPGID 88
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL+ V + D+PV+MMS + + V + +QHGA DYLLKP+ + ++++W HV+
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 135 RK 136
RK
Sbjct: 149 RK 150
>gi|297598139|ref|NP_001045125.2| Os01g0904700 [Oryza sativa Japonica Group]
gi|255673973|dbj|BAF07039.2| Os01g0904700, partial [Oryza sativa Japonica Group]
Length = 359
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 167/379 (44%), Gaps = 47/379 (12%)
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSIT 291
DLMNVP LTRENVASHLQKYRLYL+RLQK + +G +Q D K ++ + +++S
Sbjct: 1 DLMNVPGLTRENVASHLQKYRLYLSRLQKQNEERILGAARQ-DFSHKGTSENLNLRSSFQ 59
Query: 292 VHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHK-AR 350
N ++N GY + N Q S D K +PV KR L D +S
Sbjct: 60 EQPSN-IAN-GYPHASQNIQTQANMLDSQLEDTKSTVPLPVPDKKRTLASDAADSQNVTS 117
Query: 351 CSQIGFNGSF--VPGHSDVNFTSFDSAIPTQPWS-EVSETQF----QHEHKPLRLENDFT 403
S +G SF +P + D S + Q W+ + QF +H H+ L D++
Sbjct: 118 ASSLGGVLSFKSMPVNQDRK-PSETMILECQAWTGGIPSKQFMQYPKHNHERCDLLGDYS 176
Query: 404 QLPLPGPRHHIQVDCIQSGPSASSKPSVVDKD-----NLKP--FDCTYKSNYPNAIPIGS 456
LP P H + + + P S ++ D ++KP DC KS P +
Sbjct: 177 CLPKPDLEHPVGPSNLYAPPPLISMSCGMEGDARDFSDVKPAIMDCI-KSLSPA---LTC 232
Query: 457 AVDTFPVQTTSPIVNHQPFEPIARTTSSMKSQGLN-LSCIPDLEAAQRNINWG------- 508
VD+ VQ + +V +KS G++ L I D Q N
Sbjct: 233 TVDSVSVQLSDSVV--------TSIDGDLKSSGVDGLPSIKDCCLDQTNSQGSLRPSQEP 284
Query: 509 --VGSS-LTSLDEDLQLCWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDY 565
+GS+ L SL EDL L G N+GL I+ Y+D + S + + YD + F
Sbjct: 285 SIIGSTELASLPEDLPSYPLHGVSLE-NIGLSSIDLLNYSDAMILSGLQSNWYDDLEFSS 343
Query: 566 EHYYDPTECPIIDQGLFIA 584
E + P ID+ LF +
Sbjct: 344 EMM----DYPSIDECLFAS 358
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 4/169 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + +L KCSY+VT+ R + L DI++S+V++P
Sbjct: 17 SKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDIILSEVDLPM 76
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 77 SKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTNELLNLWTH 136
Query: 133 VFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRK 181
++R++ +NI ++ + SD + + L +D T R RK
Sbjct: 137 MWRRRQMLGLAEKNILSYDFDLVVSDPSDPNTNSTTLFSDD-TDDRSRK 184
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VD D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 135 RK 136
R+
Sbjct: 181 RR 182
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER 60
+E+G S + + + +R+L+ D+D + + +L +CSY+VT+ AR + L
Sbjct: 11 IESGGKSGGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAE 70
Query: 61 KDGYDIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYL 117
DI+++++++P G K+L+++ + + +PVIMMS E S V+K ++ GA DYL
Sbjct: 71 GQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYL 130
Query: 118 LKPIRMKELRNIWQHVFRKK 137
+KP+R EL N+W H++R++
Sbjct: 131 VKPLRTNELLNLWTHMWRRR 150
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 4 GFSSPRNDTF-NPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
G +S D F + + +R+L+ D+D + + +L CSY+VT+ AR + L
Sbjct: 22 GNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQ 81
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLK 119
DI++++V++P G KLL+++ + +L PVIMMS E S V+K ++ GA DYL+K
Sbjct: 82 YIDIILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVK 141
Query: 120 PIRMKELRNIWQHVFRKK 137
P+R EL N+W H++R++
Sbjct: 142 PLRTNELLNLWTHMWRRR 159
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KCSY+V A L+ D+++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS S V+K + GA D+L+KP+R EL N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 134 FRK 136
+R+
Sbjct: 170 WRR 172
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYEVT +A +L + K D+V+++V+MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 134 FRK 136
+R+
Sbjct: 183 WRR 185
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VDDD + ++ +L+ C YEVT A L + + D+V+++V MP +
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 133
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H+ L+ ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 134 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 192
Query: 134 FRK 136
+R+
Sbjct: 193 WRR 195
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + +++ +L+ CSYEVT A S+L + + D+V+++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H + ++PVIMMS V K + GA D+ +KPIR EL+N+WQHV
Sbjct: 154 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 212
Query: 134 FRK 136
+RK
Sbjct: 213 WRK 215
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VD D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 135 RK 136
R+
Sbjct: 182 RR 183
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D + + +L KCSY+VT+ AR + L DI++S+V++P
Sbjct: 22 VRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILSEVDLPMNK 81
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 82 GMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 141
Query: 135 RKK 137
R++
Sbjct: 142 RRR 144
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VD D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 135 RK 136
R+
Sbjct: 182 RR 183
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + +++ +L+ CSYEVT A S+L + + D+V+++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H + ++PVIMMS V K + GA D+ +KPIR EL+N+WQHV
Sbjct: 132 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 190
Query: 134 FRK 136
+RK
Sbjct: 191 WRK 193
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VDDD + ++ +L+ C YEVT A L + + D+V+++V MP +
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 145
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H+ L+ ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 146 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 204
Query: 134 FRK 136
+R+
Sbjct: 205 WRR 207
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYEVT +A +L + K D+V+++V+MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 134 FRK 136
+R+
Sbjct: 183 WRR 185
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LR+L+V+ D A ++ +L+ C YEVT A LL + +D+V++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + ++ + +P+++MS V + + GACDYL+KP+R ELRN+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 134 FRK 136
+RK
Sbjct: 302 WRK 304
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LR+L+V+ D A ++ +L+ C YEVT A LL + +D+V++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + ++ + +P+++MS V + + GACDYL+KP+R ELRN+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 134 FRK 136
+RK
Sbjct: 302 WRK 304
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VD D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 135 RK 136
R+
Sbjct: 182 RR 183
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+VD D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 135 RK 136
R+
Sbjct: 182 RR 183
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LR+L+V+ D A ++ +L+ C YEVT A LL + +D+V++DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + +P+++MS V + + GACDYL+KP+R ELRN+WQHV+
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 135 RK 136
RK
Sbjct: 132 RK 133
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYE+T +A +L + K D+V+++V+MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 134 FRK 136
+R+
Sbjct: 183 WRR 185
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L VL+V+ D + +++ +L+ C Y+V + + A + L ++++ D+V+++V MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS S V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 135 RKKIH 139
R++ H
Sbjct: 171 RQRCH 175
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D L + +L +CSY+VT+ AR + L DI+++++++P
Sbjct: 19 VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L ++ + DL PVIMMS E V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 135 RKK 137
R++
Sbjct: 139 RRR 141
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D L + +L +CSY+VT+ AR + L DI+++++++P
Sbjct: 21 VRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 80
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L ++ + DL PVIMMS E V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 81 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 140
Query: 135 RKK 137
R++
Sbjct: 141 RRR 143
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D L + +L +CSY+VT AR + L DI+++++++P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L ++ + DL PVIMMS E V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 135 RKK 137
R++
Sbjct: 139 RRR 141
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 11 DTFNP-AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
D+F P L+VL+V++D + ++ +L+ CSYEVT A +L + + DIV++
Sbjct: 87 DSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLT 146
Query: 70 DVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 125
+V MP + G K++ H + ++PVIMMS V K + GA D+L+KPIR E
Sbjct: 147 EVVMPFISGIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 126 LRNIWQHVFRK 136
L+N+WQHV+R+
Sbjct: 206 LKNLWQHVWRR 216
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V++D + +++ +L+KC YEV A L + ++ D+V+++V M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + S V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 135 RK 136
R+
Sbjct: 202 RR 203
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++ +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 133 VFRKK 137
V+R++
Sbjct: 146 VWRRR 150
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
FK+L+++ +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W HV+
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 135 RKK 137
R++
Sbjct: 148 RRR 150
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
FK+L+++ +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W HV+
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 135 RKK 137
R++
Sbjct: 148 RRR 150
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 28/200 (14%)
Query: 12 TFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV 71
T + + + VL+VDD +L++C Y+VTT R+A++LL ER ++++++DV
Sbjct: 4 TTHSSTVHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDV 54
Query: 72 NMPDMDGFKLLEHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
MPD+DG LL V L ++PV+MMS + VM ++ GA DY++KP+ K +++
Sbjct: 55 MMPDVDGPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKH 114
Query: 129 IWQHVFRKK--------IHEVRDIENIEGFESIHMT--RSGSDQSVDG-PLLTGEDLTSV 177
+W HV+R+K R+++ FE+ M R G D P+ E+ +S
Sbjct: 115 MWAHVWRRKQRYQMVPRFENGREVDEEREFEAAAMEELRGGVDLEAGMLPVPETEEYSS- 173
Query: 178 RKRKDAENRHDDRDCGDASS 197
D E+ D+ GDA++
Sbjct: 174 ----DGESDDDEARRGDAAA 189
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 63/84 (75%)
Query: 56 LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACD 115
+LRE K+ +D++ +D+ M +MDG +LL+ + EMDLPV+++S D E V+KGV GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 116 YLLKPIRMKELRNIWQHVFRKKIH 139
L+KP++M+ L+ WQHV RKKI+
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKKIN 84
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D + + +L +CSY+VT+ AR + L DI+++++++P
Sbjct: 30 VRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKK 89
Query: 78 GFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L+++ + + +PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 90 GMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 149
Query: 135 RKK 137
R++
Sbjct: 150 RRR 152
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+DD + ++ +L+ C YEVT A +L R D+V++D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 78 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G +LL + + D +PV+MMS V+K + GA D+L+KP+R EL+N+WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 134 FR 135
+R
Sbjct: 228 WR 229
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 3 NGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTC---GLARDALSLLRE 59
G PR P G+RVL VDDD LK+LE +L +C Y T+ G LLRE
Sbjct: 80 KGQRRPRPKDQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLRE 139
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVI 94
+KD +D VIS+V+MPDMDGFKLLE VGLEMDLP I
Sbjct: 140 KKDQFDPVISNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLL---RERKDGYDIVISDVNMPDM 76
VL+V+DD LK +E++L+KC+Y+VT R+A+ +L R D++++D+ MP++
Sbjct: 5 VLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMPEV 64
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF L+ V D+PV++MS V++ Q GA DYL+KPIR EL +WQHV
Sbjct: 65 TGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQHV 124
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 8 PRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTC---GLARDALSLLRERKDGY 64
PR P G+RVL VDDD LK+LE +L +C Y T+ G LLRE+KD +
Sbjct: 85 PRPKDQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQF 144
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVI 94
D VIS+V+MPDMDGFKLLE VGLEMDLP I
Sbjct: 145 DPVISNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++G +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 133 VFRKK 137
V+R++
Sbjct: 149 VWRRR 153
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 11 DTFNP-AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
D+F P L+VL+V++D + ++ +L+ CSYEVT A +L + + DIV++
Sbjct: 87 DSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLT 146
Query: 70 DVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 125
+V MP + G K++ H + ++PVIMMS V K + GA D+L+KPIR E
Sbjct: 147 EVVMPFISGIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 126 LRNIWQHVFRK 136
L+N+WQHV+R+
Sbjct: 206 LKNLWQHVWRR 216
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++G +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 133 VFRKK 137
V+R++
Sbjct: 149 VWRRR 153
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++G +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 133 VFRKK 137
V+R++
Sbjct: 149 VWRRR 153
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + ++L+ CSY+VT R +++L DI++++V++P
Sbjct: 31 SKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPV 90
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++ +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W H
Sbjct: 91 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 150
Query: 133 VFRKK 137
V+R++
Sbjct: 151 VWRRR 155
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+V+ D + +++ +L+ C YEV + A + L + ++ D+V+++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 135 RK 136
R+
Sbjct: 181 RR 182
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+ D D + + ++L CSY+VT R +++L DI++++V++P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 79 FKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
FK+L+++G +L P+IMMS E S V+K ++ GA +YL+KP+RM EL N+W HV+R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 136 KK 137
++
Sbjct: 121 RR 122
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + + ++L CSY VT R +++L DI++++V++P
Sbjct: 26 SKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 85
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++ DL P+IMMS E S V+K ++ GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 145
Query: 133 VFRKK 137
V+R++
Sbjct: 146 VWRRR 150
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D D + + ++L CSY VT R +++L DI++++V++P
Sbjct: 32 SKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 91
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
FK+L+++ DL P+IMMS E S V+K ++ GA +YL+KP+R EL N+W H
Sbjct: 92 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 151
Query: 133 VFRKK 137
V+R++
Sbjct: 152 VWRRR 156
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D+D + +L CSY+VT+ AR + L DI++++V++P
Sbjct: 25 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 84
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G K+L+++ + +L P+IMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 85 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 144
Query: 133 VFRKK 137
++R++
Sbjct: 145 MWRRR 149
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + + ++L CSY VT R +++L DI++++V++P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
FK+L+++ DL P+IMMS E S V+K ++ GA +YL+KP+R EL N+W HV+
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 135 RKK 137
R++
Sbjct: 144 RRR 146
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYEV +A +L + K D+V+++V +P
Sbjct: 66 LKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHS 125
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 126 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 184
Query: 134 FRK 136
+RK
Sbjct: 185 WRK 187
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+ +R+L+ D+D + +L CSY+VT+ AR + L DI++++V++P
Sbjct: 23 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 82
Query: 76 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G K+L+++ + +L P+IMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 133 VFRKK 137
++R++
Sbjct: 143 MWRRR 147
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 4 GFSSPRNDTF-NPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD 62
G +S D F + + +R+L+ D+D + + +L CSY+V + AR + L
Sbjct: 22 GNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQ 81
Query: 63 GYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLK 119
D+++++V++P G KLL+++ + +L PVIMMS E S V+K ++ GA DYL+K
Sbjct: 82 YIDMILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVK 141
Query: 120 PIRMKELRNIWQHVFRKK 137
P+R EL N+W H++R++
Sbjct: 142 PLRTNELLNLWTHMWRRR 159
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/57 (73%), Positives = 46/57 (80%)
Query: 30 LKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVG 86
L ILEKML+ C YEVT C A ALSLLR K G+DIVISDV+MPDMDGFKLLEH+G
Sbjct: 2 LMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D L + +L +CSY+VT+ AR + L DI+++++++P
Sbjct: 19 VRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L ++ + DL PVIMMS E V+K ++ GA DYL+KP+R EL N+W +++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTYMW 138
Query: 135 RKK 137
R++
Sbjct: 139 RRR 141
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ CSYEV A +L + + D+V+++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 135 RK 136
R+
Sbjct: 208 RR 209
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ CSYEV A +L + + D+V+++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 78 GFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL H L ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV
Sbjct: 134 GIGLLCKIRNHKTLR-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 192
Query: 134 FRK 136
+R+
Sbjct: 193 WRR 195
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Query: 172 EDLTSVRKRKDAENRHDDRDCG---------DASSTKKARVVWSIDLHQKFVKAVNQIGF 222
E L ++RKDA N D G +A + K+ R+VW+ LH++FV AV +G
Sbjct: 69 EALPLFKERKDAGNAKDTDSGGGPVNSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGI 128
Query: 223 DKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LMNV LTRENVASHLQKYRLYL R+Q
Sbjct: 129 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQ 165
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 178 RKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 237
R R++A + H D DA + K+ R+VW+ LH++FV AV+ +G PK I+ LMNV
Sbjct: 231 RSREEAMSHHLDGSEDDAQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQLMNVD 290
Query: 238 WLTRENVASHLQKYRLYLTRL 258
LTRENVASHLQKYRLYL RL
Sbjct: 291 GLTRENVASHLQKYRLYLKRL 311
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + + ++L C+Y VT R +++L DI++++V++P
Sbjct: 24 VRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
FK+L+++ DL P+IMMS E S V+K ++ GA +YL+KP+R EL N+W HV+
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 135 RKK 137
R++
Sbjct: 144 RRR 146
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + I+ +LK CSYEVT +A +L + D+V+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVVMPVNS 123
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K++ H L+ ++PVIMMS V K + +GA D+L+KPIR EL+N+WQHV
Sbjct: 124 GTGLLSKIMSHQTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 134 FRK 136
+R+
Sbjct: 183 WRR 185
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D D + + ++L C+Y VT R +++L DI++++V++P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEIDIILAEVDLPVSK 83
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
FK+L+++ DL P+IMMS E S V+K ++ GA +YL+KP+R EL N+W HV+
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 135 RKK 137
R++
Sbjct: 144 RRR 146
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D L + +L +CSY+VT AR + L DI+++++++P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L ++ + DL PVIMMS E V+K ++ GA DYL+KP+ EL N+W H++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNELLNLWTHMW 138
Query: 135 RKK 137
R++
Sbjct: 139 RRR 141
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ CSYEV A +L + + D+V+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 135 RK 136
R+
Sbjct: 209 RR 210
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+ PIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+ PIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+ PIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+ D + ++ +L+ CSYEV A +L + + D+V+++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PV+MMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 135 RK 136
R+
Sbjct: 199 RR 200
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 20/245 (8%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLR---ERKDGYDIVISDVNMP 74
L LV+D D A L + + L K ++ V + A AL ++ + D+V+ +VN+
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 75 DMD-----GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
+M L H+ E+ +P+ M + + K + GAC +LLKP+ + +
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDD 189
W K + + + S S + L+ + SV + E
Sbjct: 125 WHQALEHKSKKAAPQRPSLNDSTKNRMVSPSTEKPKEVLILERNNLSVPQSNGYE----- 179
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHL 248
K+ RV W+I+LH+KF++AV +G +K P+KIL LMNV LT +++ SHL
Sbjct: 180 ------EPKKQNRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVKHIGSHL 233
Query: 249 QKYRL 253
QK+RL
Sbjct: 234 QKHRL 238
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 24 DDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLE 83
+DD A ++ +L+ C+YEVT+ A LL E +D+V++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 84 HVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ L+ + +P+++MS + V + + GACDYL+KP+R EL+N+WQHV+RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 172 EDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKIL 231
E T+V K + + G A TKK R+VW+ +LH +F+ AVN +G PK IL
Sbjct: 34 ETATTVTGEKRVSDGEKEATSGRA--TKKRRLVWTPELHVRFMSAVNHLGITNAVPKTIL 91
Query: 232 DLMNVPWLTRENVASHLQKYRLYLTRL 258
LMNV +TRENVASHLQKYRLYL RL
Sbjct: 92 QLMNVEGMTRENVASHLQKYRLYLKRL 118
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 24 DDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLE 83
+DD A ++ +L+ C+YEVT+ A LL E +D+V++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 84 HVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ L+ + +P+++MS + V + + GACDYL+KP+R EL+N+WQHV+RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
LRVL+V+ D + +I+ +L+KCSY V A +L+ + + D+++++V++P +
Sbjct: 51 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 110
Query: 77 DGFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G+ LL + +E D +PVI S D + V K + GA DYL+KP+R ELRN+WQH
Sbjct: 111 SGYALLTLI-MEHDICKNIPVI--STDS-VNTVYKCMLKGAADYLVKPLRRNELRNLWQH 166
Query: 133 VFRKK 137
V+R++
Sbjct: 167 VWRRQ 171
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V+ D + ++ +L+ CSYEV A +L + + D+++++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PV+MMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 135 RK 136
R+
Sbjct: 201 RR 202
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 167 PLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG 226
P G+ + + +N + A++TK+AR+VW+ LH++FV+ V +G
Sbjct: 103 PSFPGKGAAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAV 162
Query: 227 PKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LMNV LTRENVASHLQKYRLY+ R+Q
Sbjct: 163 PKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQ 195
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 28/147 (19%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLL---RERKDGYDIVISDVNM 73
G V++V+DD LK++E++L+K SY V+T AL +L ++R D D++++D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 74 PDMDGFKLLE---HVGLEMDLPVI----------------------MMSVDGETSRVMKG 108
P++ GF L+ H D+PV+ +MS V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 109 VQHGACDYLLKPIRMKELRNIWQHVFR 135
Q GA DYL+KPIR EL +WQHV+R
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ C YEVT A +L++ + D+V+++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS + V K + GA D+L+KPIR EL+ +WQHV+
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 135 RK 136
RK
Sbjct: 157 RK 158
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRVL+V+ D + +I+ +L+KC V GL A L+++ D+++++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKCIIAVPD-GLK--AWETLKKKASELDLILTEVELPAIS 88
Query: 78 GFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
GF LL + +E D+ PVIMMS + +K + +GA D+L+KPIR ELRN+WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 134 FRK 136
+R+
Sbjct: 148 WRR 150
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+ D +++ +L+ C Y+V + + A + L ++++ DIV+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + ++PVIMMS + + V K + GA D+L+ PIR EL+N+WQHV+
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ C YEVT A +L++ + D+V+++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS + V K + GA D+L+KPIR EL+ +WQHV+
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 135 RK 136
RK
Sbjct: 212 RK 213
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ C YEVT A +L + D+V+++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 78 GFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS + V K + GA D+L KPIR EL+N+WQHV+
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 135 RK 136
RK
Sbjct: 218 RK 219
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 8/130 (6%)
Query: 15 PAG-----LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-KDGYDIVI 68
PAG L VLVVDDD A+L+ L+ ML Y VT A +AL + + +D + IV+
Sbjct: 15 PAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVM 74
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+DV+M MDGF LL + +PVIM S + VM+ V +GACDY++KP+ + ++
Sbjct: 75 TDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKF 132
Query: 129 IWQHVFRKKI 138
IW+HV R ++
Sbjct: 133 IWKHVLRWRL 142
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 200 KARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP--WLTRENVASHLQKYRLYLTR 257
+ R W+ H FV+A Q+ D+ GPKKI LM + ++T+ V+SHLQKYR +L
Sbjct: 264 RTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTKTQVSSHLQKYRSWLEN 322
Query: 258 LQKDELKTS 266
+K E TS
Sbjct: 323 ERKKEEATS 331
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L CSYEV A +L + + D+V+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V K + GA D+L+KPIR EL+N+WQHV+
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 135 RK 136
R+
Sbjct: 209 RR 210
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDV--NMP 74
GL+VL VDDD +L+ L + L++C YEVT +AL L + DG+D V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
MDGF LL +G + VI+ S + +G Q GAC KP+R ++ IWQHV
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQS--VDGPLLTGEDLTSVRKRKDAENRHDDRDC 192
R R + R S+ D P G + K K A D
Sbjct: 139 R-----WRRENAAGVVAANANPRPSSEGGHLEDTPRKRGRGVNDSGKGKGAS------DG 187
Query: 193 GD----ASSTKKARVVWSIDLHQKFVKAVNQI 220
G ++TKK + W+ ++H+ FV AV Q+
Sbjct: 188 GGVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A++TK+AR+VW+ LH++FV+ V +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 123 AAATKRARLVWTPQLHKRFVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLY 182
Query: 255 LTRLQ 259
+ R+Q
Sbjct: 183 VKRMQ 187
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 8/130 (6%)
Query: 15 PAG-----LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-KDGYDIVI 68
PAG L VLVVDDD A+L+ L+ ML Y VT A +AL + + +D + IV+
Sbjct: 15 PAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVM 74
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+DV+M MDGF LL + +PVIM S + VM+ V +GACDY++KP+ + ++
Sbjct: 75 TDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKF 132
Query: 129 IWQHVFRKKI 138
IW+HV R ++
Sbjct: 133 IWKHVLRWRL 142
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 167 PLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG 226
P G+ + + +N + A++TK+AR+VW+ LH++FV+ V +G
Sbjct: 103 PSFPGKGEAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAV 162
Query: 227 PKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LMNV LTRENVASHLQKYRLY+ R+Q
Sbjct: 163 PKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQ 195
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 8/130 (6%)
Query: 15 PAG-----LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-KDGYDIVI 68
PAG L VLVVDDD A+L+ L+ ML Y VT A +AL + + +D + IV+
Sbjct: 15 PAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVM 74
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+DV+M MDGF LL + +PVIM S + VM+ V +GACDY++KP+ + ++
Sbjct: 75 TDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKF 132
Query: 129 IWQHVFRKKI 138
IW+HV R ++
Sbjct: 133 IWKHVLRWRL 142
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 200 KARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP--WLTRENVASHLQKYRLYLTR 257
+ R W+ H FV+A Q+ D+ GPKKI LM + ++T+ V+SHLQKYR +L
Sbjct: 264 RTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTKTQVSSHLQKYRSWLEN 322
Query: 258 LQKDELKTS 266
+K E TS
Sbjct: 323 ERKKEEATS 331
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V K + GA D+L+KPIR EL+ +WQHV+
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 135 RK 136
R+
Sbjct: 205 RR 206
>gi|384252672|gb|EIE26148.1| hypothetical protein COCSUDRAFT_61138 [Coccomyxa subellipsoidea
C-169]
Length = 444
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM- 73
P GL+VLVVD D + + L + L++ +YEV+ C DA +LLR+ YDI++ +
Sbjct: 18 PNGLQVLVVDGDTSSSQCLRQKLEELAYEVSCCSSGSDASALLRKEDSSYDILLVEAKAL 77
Query: 74 --PDMDGFKLLEHVGLEMDLPVIMMS-VDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
DG L + LP+++MS T V +G++ GA D L KP+ +LRNIW
Sbjct: 78 AKDATDGGSLRDSAA---HLPLVLMSEKSSSTDAVWRGIELGAADVLEKPLSSLKLRNIW 134
Query: 131 QHVFRKKIHEVRD 143
QHV RK + +D
Sbjct: 135 QHVVRKMMSSSQD 147
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LRV++V++D + +++ +L+KC YEV A L + ++ D+V+++V MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + + D+PVIMMS + S V K + GA D+L+KP+R EL+N+WQHV+
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 135 RK 136
R+
Sbjct: 200 RR 201
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L+VL+V++D + ++ +L+ C YE T A LL++ + D+V+++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL ++ ++PVIMMS + V + + GA D+L+KPIR EL+ +WQHV+
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 135 RK 136
R+
Sbjct: 209 RR 210
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D + ++ +L+ C YEV A +L + ++ D+V+++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 78 G----FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G FK++ H + ++PV+MMS V K + GA D+L+KPIR EL+N+WQH+
Sbjct: 144 GIALLFKIMSHKSRK-NVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHL 202
Query: 134 FRK 136
+R+
Sbjct: 203 WRR 205
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G LL + ++PVIMMS V K + GA D+L+KPIR EL+ +WQHV+
Sbjct: 144 GISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 203
Query: 135 RK 136
R+
Sbjct: 204 RR 205
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 123 MKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
M +L HV R+ + D+ SI M+ D S G G + RK D
Sbjct: 37 MPDLAKTAAHVSRETRPSLLDLRVQS---SISMSFDPGDDSSKG----GGSAKNARKLAD 89
Query: 183 AENRHDDRDCG--------DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLM 234
++ D G +A + K+ R+VW+ LH++FV AV +G PK I+ LM
Sbjct: 90 SDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLM 149
Query: 235 NVPWLTRENVASHLQKYRLYLTRLQ 259
NV LTRENVASHLQKYRLYL R+Q
Sbjct: 150 NVEGLTRENVASHLQKYRLYLKRMQ 174
>gi|297723043|ref|NP_001173885.1| Os04g0348800 [Oryza sativa Japonica Group]
gi|255675355|dbj|BAH92613.1| Os04g0348800 [Oryza sativa Japonica Group]
Length = 806
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 15 PAG-LRVLVVDDDLAWLKILEKMLK-KCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
PAG L +V+D+D ML + ++ VT AL L+ +G D+V++DV+
Sbjct: 22 PAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADVH 81
Query: 73 MPDMDGFKLLEHVGLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
M +M+GF L+ V E+ + VIMMS + + + V+ GA + KP+ ++N+W
Sbjct: 82 MEEMNGFDFLK-VARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 140
Query: 131 QHVFRK--KIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
Q+V K ++ +++D+ G ES + S AEN +
Sbjct: 141 QYVDLKVLRMEKIKDLLQGIGDESTCANETNS---------------------LAENPKN 179
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D + KK ++W+ L +KF+ A+ +G D PK I +M V + +A+HL
Sbjct: 180 D-------TKKKYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHL 231
Query: 249 QKYRLYLTR 257
QK+RL LT+
Sbjct: 232 QKHRLRLTK 240
>gi|386812842|ref|ZP_10100067.1| two-component response regulator [planctomycete KSU-1]
gi|386405112|dbj|GAB62948.1| two-component response regulator [planctomycete KSU-1]
Length = 464
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 27/175 (15%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVV+DD L + +L K YEV T +AL+L R ++ YD+VI+D+ MP MDG
Sbjct: 6 KILVVEDDEYVLGSIRILLNKEGYEVNTALNGLEALNLYR--RESYDLVIADLKMPQMDG 63
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF--- 134
+LL+ + LE D+ +IMM+ G ++ ++ GA DY+ KP+ +E+R + Q F
Sbjct: 64 IELLKQLKLEFSDVSLIMMTAYGSIRTAVEAMKMGAYDYVTKPVSAEEIRLVIQRAFERQ 123
Query: 135 ---------RKKIHEVRDIENIEGFESIHMTR--------SGSDQSVDGPLLTGE 172
RK++ E ++NI G +S M R + +D +V L+TGE
Sbjct: 124 NLITEIKTLRKELEERFSLDNIIG-KSYAMQRVYDLILQVANTDATV---LITGE 174
>gi|218194631|gb|EEC77058.1| hypothetical protein OsI_15444 [Oryza sativa Indica Group]
Length = 390
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 15 PAG-LRVLVVDDDLAWLKILEKMLK-KCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
PAG L +V+D+D ML + ++ VT AL L+ +G D+V++DV+
Sbjct: 8 PAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADVH 67
Query: 73 MPDMDGFKLLEHVGLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
M +M+GF L+ V E+ + VIMMS + + + V+ GA + KP+ ++N+W
Sbjct: 68 MEEMNGFDFLK-VARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 131 QHVFRK--KIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
Q+V K ++ +++D+ G ES + S AEN +
Sbjct: 127 QYVDLKVLRMEKIKDLLQGIGDESTCANETNS---------------------LAENPKN 165
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D + KK ++W+ L +KF+ A+ +G D PK I +M V + +A+HL
Sbjct: 166 D-------TKKKYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHL 217
Query: 249 QKYRLYLTR 257
QK+RL LT+
Sbjct: 218 QKHRLRLTK 226
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R++V+DDD + L++ L++ Y+V C ARD L R YD+VISD+ MPDMD
Sbjct: 3 IRIIVIDDDAVACEFLQEALRRADYDVDICTSARDVLKGDLSR---YDLVISDIRMPDMD 59
Query: 78 GFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G +LL + + LPVI+M+ G M+ +Q GA DY+ KP + +RN+ + V
Sbjct: 60 GLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVL 117
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYE-------------VTTCGLARDALSLLRERKDGY 64
LRVL+V++D + +++ +L+KC YE V A L + ++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 65 DIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI 121
D+V+++V MP + G LL + + D+PVIMMS + V K + GA D+L+KPI
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 122 RMKELRNIWQHVFRK 136
R EL+N+WQHV+R+
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K+L H ++PVIMMS V K + GA D+L+KPIR EL+ +WQHV
Sbjct: 134 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 192
Query: 134 FRK 136
+R+
Sbjct: 193 WRR 195
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSY-EVTTCGLARDALSLLRERKDGYDIVISDV 71
++P +++LVVDD+ ++ K+L+K Y EV R A+ L+ R +++V+ D+
Sbjct: 7 WHPKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELIENR--SFNLVLCDL 64
Query: 72 NMPDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
+MPD+DG +++ V + D P++MMS + + V K + GA DYLLKPI+ ++N
Sbjct: 65 HMPDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKN 124
Query: 129 IWQHVFRKK 137
+WQ+V+RK+
Sbjct: 125 LWQNVWRKR 133
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K+L H ++PVIMMS V K + GA D+L+KPIR EL+ +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196
Query: 134 FRK 136
+R+
Sbjct: 197 WRR 199
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
RVL+V++D + ++ +L+ C Y+VT A +L++ + D+V+++VN+P + G
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSG 118
Query: 79 FKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
LL + ++PVIMMS + V+K + GA D+L+KP+R EL+ +WQH++R
Sbjct: 119 IALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWR 178
Query: 136 KK 137
++
Sbjct: 179 RR 180
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 10/90 (11%)
Query: 180 RKDAENRHDDRDCG----------DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKK 229
RK A++ +D D G +A + K+ R+VW+ LH++FV AV +G PK
Sbjct: 81 RKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKT 140
Query: 230 ILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
I+ LMNV LTRENVASHLQKYRLYL R+Q
Sbjct: 141 IMQLMNVEGLTRENVASHLQKYRLYLKRMQ 170
>gi|298248600|ref|ZP_06972405.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
gi|297551259|gb|EFH85125.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
Length = 1036
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Query: 19 RVLVVDDDLAWLKILEK--MLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
R+L+VDDD+A L+ L + ML+ +V T A DAL+ L+ R+ YD+V+SD+ MP M
Sbjct: 32 RILLVDDDMAALQALSRTFMLRMSDVDVDTSSSALDALAQLQSRE--YDVVVSDIKMPMM 89
Query: 77 DGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPI 121
DG +LL ++ M D+PV++++ GE M+ +Q GA DY LKPI
Sbjct: 90 DGIQLLSNIHKRMPDIPVLLITGHGEHELAMQALQEGAYDYTLKPI 135
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV+ +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 238 AHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLY 297
Query: 255 LTRLQ 259
L RLQ
Sbjct: 298 LKRLQ 302
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 86.3 bits (212), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG--YDIVI 68
DTF P GL VL V+DD K+LE+ LK +Y A+ L +LRERKDG +D+VI
Sbjct: 4 DTF-PIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVI 62
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPV 93
S+V +P+MDGF LL+ +GLEMDLPV
Sbjct: 63 SNVIIPNMDGFNLLKLIGLEMDLPV 87
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 11 DTFNPAGL-RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+ F P G +VL+V+ D + I+ +L+KCSYEV +A +L + + D+V++
Sbjct: 88 ERFLPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLT 147
Query: 70 DVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+V + G LL + + PVIMMS V+K + GA D+L+KPIR EL
Sbjct: 148 EVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNEL 207
Query: 127 RNIWQHVFRK 136
+N+WQHV+R+
Sbjct: 208 KNLWQHVWRR 217
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+AR+VW+ LH++FV+AV +G PK I+ LMNV LTRENVASHLQKYRLYL R+
Sbjct: 131 KRARLVWTPQLHKRFVEAVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 190
Query: 259 Q 259
Q
Sbjct: 191 Q 191
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 95 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 154
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G K+L H ++PVIMMS + K + GA D+L+KPIR EL+ +WQHV
Sbjct: 155 GVGLLCKILNHKS-RRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHV 213
Query: 134 FRK 136
+R+
Sbjct: 214 WRR 216
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 45/60 (75%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
KK R+VW+ +LH +F+ AVN +G PK IL LMNV +TRENVASHLQKYRLYL RL
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRL 117
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 53 ALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGV 109
A ++RER +D+V+++V MP + G +LL + ++PVIMMS V++ +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 110 QHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDG 166
Q GA D+L+KP+R ELRN+WQHV+R+ + + S H++ +G + S G
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTG 119
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 197 STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 256
S+K+AR+VW+ LH++FV+ V +G PK I+ LMNV LTRENVASHLQKYRLY+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 257 RLQ 259
R+Q
Sbjct: 175 RMQ 177
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 197 STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 256
S+K+AR+VW+ LH++FV+ V +G PK I+ LMNV LTRENVASHLQKYRLY+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 257 RLQ 259
R+Q
Sbjct: 175 RMQ 177
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 53 ALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGV 109
A ++RER +D+V+++V MP + G +LL + ++PVIMMS V++ +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 110 QHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDG 166
Q GA D+L+KP+R ELRN+WQHV+R+ + + S H++ +G + S G
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTG 119
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
D+ D A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASH
Sbjct: 71 DNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 130
Query: 248 LQKYRLYLTRLQKDELKTSVGGIKQKDSPSKD 279
LQKYRLYL R+Q VG + D P+ D
Sbjct: 131 LQKYRLYLKRMQGLSAGGGVGRVASAD-PTTD 161
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 184 ENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
EN +DD A + K+ R+VW+ LH++FV V +G PK I+ LMNV LTREN
Sbjct: 134 ENSNDDPS---ARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTREN 190
Query: 244 VASHLQKYRLYLTRLQ 259
VASHLQKYRLYL R+Q
Sbjct: 191 VASHLQKYRLYLKRMQ 206
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
+KAR+VW+ +LH +F+ A++ +G PK IL +MNV +TRENVASHLQKYRLYL RL
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASHLQKYRLYLRRL 262
Query: 259 QKDELKTSVGGIKQKDSPSKDS 280
GG+ KD D+
Sbjct: 263 ---------GGLSDKDRADADA 275
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV Q+G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 82 ARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 141
Query: 255 LTRLQ 259
L R+Q
Sbjct: 142 LKRMQ 146
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 174 LTSVRKRKDAENRHDDRDCGD-------ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG 226
L S + AE D D G A + K+ R+VW+ LH++FV AV +G
Sbjct: 68 LPSSQANSSAEFAADSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAV 127
Query: 227 PKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LM+V LTRENVASHLQKYRLYL R+Q
Sbjct: 128 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ 160
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 94 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLY 153
Query: 255 LTRLQ 259
L R+Q
Sbjct: 154 LKRMQ 158
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 183 AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
EN +DD A + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRE
Sbjct: 184 TENSNDDPS---ARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRE 240
Query: 243 NVASHLQKYRLYLTRLQ 259
NVASHLQKYRLYL R+Q
Sbjct: 241 NVASHLQKYRLYLKRMQ 257
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 174 LTSVRKRKDAENRHDDRDCGD-------ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG 226
L S + AE D D G A + K+ R+VW+ LH++FV AV +G
Sbjct: 69 LPSSQANSSAEFAADSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAV 128
Query: 227 PKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LM+V LTRENVASHLQKYRLYL R+Q
Sbjct: 129 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ 161
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 11 DTFNPAGL-RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+ F P G +VL+V+ D + I+ +L+ CSYEV +A +L + + D+V++
Sbjct: 88 ERFLPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLT 147
Query: 70 DVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+V + G LL + + PVIMMS V+K + GA D+L+KPIR EL
Sbjct: 148 EVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNEL 207
Query: 127 RNIWQHVFRK 136
+N+WQHV+R+
Sbjct: 208 KNLWQHVWRR 217
>gi|297838577|ref|XP_002887170.1| hypothetical protein ARALYDRAFT_315838 [Arabidopsis lyrata subsp.
lyrata]
gi|297333011|gb|EFH63429.1| hypothetical protein ARALYDRAFT_315838 [Arabidopsis lyrata subsp.
lyrata]
Length = 646
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 36/245 (14%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +L++D D A + L MLK+ S V + +A ALS++ ++K ++I+++ MP +D
Sbjct: 13 ISILLIDHDTASVASLTSMLKQFSKRVMSVDVASKALSMIEKQKKDIGLIIANIEMPHID 72
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
L V L D+P+I+++ + +T + + AC L +PI +++NIWQHV KK
Sbjct: 73 ADSFLT-VLLHKDIPLILINPEIKTKKPSDLLIKRACFSLDQPISDNDIKNIWQHVLPKK 131
Query: 138 IHEV---------------RDIENIEGFESIHMTRSGSDQSVDG--PLLTGEDLTSV-RK 179
I E +DI IE F + + S S+ G P + ++ +K
Sbjct: 132 IQESKKINITIVNQENGTDKDINQIEVFRASLKRQRTSQASLLGRQPFIDTFTISETSQK 191
Query: 180 RKD---------------AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDK 224
RK+ EN+ + D+S ++ R +W+ + H KF+ A++ +G +K
Sbjct: 192 RKNRANVEWKTKPGCLIGIENKRKEWKKMDSSVVRR-RSLWTNERHMKFLAAISILG-EK 249
Query: 225 VGPKK 229
V KK
Sbjct: 250 VLFKK 254
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 174 LTSVRKRKDAENRHDDRDCGD--------ASSTKKARVVWSIDLHQKFVKAVNQIGFDKV 225
L S + AE D D G A + K+ R+VW+ LH++FV AV +G
Sbjct: 71 LPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 130
Query: 226 GPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
PK I+ LM+V LTRENVASHLQKYRLYL R+Q
Sbjct: 131 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ 164
>gi|374289117|ref|YP_005036202.1| putative two-component response regulator [Bacteriovorax marinus
SJ]
gi|301167658|emb|CBW27241.1| putative two-component response regulator [Bacteriovorax marinus
SJ]
Length = 217
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L +L+VDDD K++EK LKK + TT D L+LLRE+ G+D+++ D+ MPD+
Sbjct: 5 LNILIVDDDQITSKLIEKRLKKRGFSTTTVHCGGDCLNLLREKNHGFDLILLDILMPDIT 64
Query: 78 GFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIWQHV 133
G ++++ + +++LP+IM + ET ++K ++ GA DY+ KP+ M L + H+
Sbjct: 65 GLEVMKELRETSSQVELPIIMTTSMKETEDIVKALKLGANDYVYKPVNMDILEARMKTHL 124
Query: 134 FRKKIHE--VRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRD 191
K+++E VR E E+ + + ++ PL ++ + + DD D
Sbjct: 125 SIKELNEQSVRQSE----LETANAMIVTYNHEINNPLTVA---MGYLQKYELTGKLDDYD 177
Query: 192 CGDASSTKKARVVWSID 208
+S + A +V I+
Sbjct: 178 KIYSSLERVAEIVKKIE 194
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 53 ALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGV 109
A ++RER +D+V+++V MP + G +LL + ++PV+MMS V+K +
Sbjct: 3 AWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLKCM 62
Query: 110 QHGACDYLLKPIRMKELRNIWQHVFRK 136
Q GA D+L+KP+R ELRN+WQHV+R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+ D+D + + +L CSY+VT R + L I+++++++P
Sbjct: 31 VRILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVIDALNAEGQHIGIILAELDLPTKK 90
Query: 78 GFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G K+L+++ + + +PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 91 GMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWMHMW 150
Query: 135 RKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
++ +NI +E + SD + + L +D KR +
Sbjct: 151 GRRRMLGLVEKNILSYEFDIVASDPSDANTNSTTLFSDDTDDKSKRSN 198
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 183 AENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
EN +DD A + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRE
Sbjct: 217 TENSNDDPS---ARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRE 273
Query: 243 NVASHLQKYRLYLTRLQ 259
NVASHLQKYRLYL R+Q
Sbjct: 274 NVASHLQKYRLYLKRMQ 290
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 188 DDRDCGDASST--KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
DD + AS T K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVA
Sbjct: 123 DDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVA 182
Query: 246 SHLQKYRLYLTRLQ 259
SHLQKYRLYL R+Q
Sbjct: 183 SHLQKYRLYLKRMQ 196
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 181 KDAENRHDDRDCGDAS--STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
+D+ D DAS ++K+ R+VW+ LH++FV V +G PK I+ LMNV
Sbjct: 120 EDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEG 179
Query: 239 LTRENVASHLQKYRLYLTRLQ 259
LTRENVASHLQKYRLYL R+Q
Sbjct: 180 LTRENVASHLQKYRLYLKRIQ 200
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 181 KDAENRHDDRDCGDAS--STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
+D+ D DAS ++K+ R+VW+ LH++FV V +G PK I+ LMNV
Sbjct: 120 EDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEG 179
Query: 239 LTRENVASHLQKYRLYLTRLQ 259
LTRENVASHLQKYRLYL R+Q
Sbjct: 180 LTRENVASHLQKYRLYLKRIQ 200
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL--LKPIR 122
D ++ +V +PD+D L + +L + E S+ M V + + L+
Sbjct: 18 DRLLWEVGLPDVDDLTPLTLQLIPSEL-AAAFRISPELSKTMTDVNRASQNTFSSLQRWH 76
Query: 123 MKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
+++ ++ F+ +E E + + + R GSD P + + D
Sbjct: 77 SQDMASMNNSYFKPFSYERTREETVTERDETDLIREGSD-----PRKLRRVESGGTEEAD 131
Query: 183 A----ENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 238
+ EN DD A + K+ R+VW+ LH++F++ V +G PK I+ LMNV
Sbjct: 132 SSLCNENFADD---SSAKTPKRPRLVWTPQLHKRFIEVVAHLGIKGAVPKTIMQLMNVEG 188
Query: 239 LTRENVASHLQKYRLYLTRLQKDELKTS 266
LTRENVASHLQKYRLY R+Q +E +S
Sbjct: 189 LTRENVASHLQKYRLYTKRMQPNEGPSS 216
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%)
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D A + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQK
Sbjct: 146 DPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 205
Query: 251 YRLYLTRLQ 259
YRLYL R+Q
Sbjct: 206 YRLYLKRMQ 214
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 13/126 (10%)
Query: 168 LLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGP 227
+L+GE++ S + + + C + +S +K +V W+ DLH+KFV+AV Q+G D+ P
Sbjct: 17 MLSGENVES---SVEYQKKRKSFPCSNKNSRRKMKVDWTPDLHRKFVQAVEQLGIDQAIP 73
Query: 228 KKILDLMNVPWLTRENVASHLQKYRLYLTR-LQKDELKTSVGGIKQKDSPSKDSAASFGI 286
KIL+LMNV LTR N+ASHLQKYR+ L KD+ + I Q KDS S +
Sbjct: 74 SKILELMNVEGLTRHNIASHLQKYRMNRRPILPKDDKR-----IWQH----KDSFPSVYM 124
Query: 287 QNSITV 292
Q +TV
Sbjct: 125 QKPVTV 130
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
P R+L+VDDD A ++ +L++ Y TT A AL RK Y +VISDV
Sbjct: 4 IAPEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVR 61
Query: 73 MPDMDGFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL-RNIW 130
MP DGF LLE + D VIM++ G+T ++ +++GA DYLLKP ++ EL R I
Sbjct: 62 MPARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIE 121
Query: 131 QHVFRKKIHEVR 142
+ + R+++ R
Sbjct: 122 RALGRRRLELAR 133
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+AR+VW+ LH++FV+ V +G PK I+ LMNV LTRENVASHLQKYRLY+ R+
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 176
Query: 259 Q 259
Q
Sbjct: 177 Q 177
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 192 CGDASST-KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
GD T K+ R+VW+ LH++FV AV +G PK I+ LMNV LTRENVASHLQK
Sbjct: 105 AGDEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQK 164
Query: 251 YRLYLTRLQ 259
YRLYL R+Q
Sbjct: 165 YRLYLKRMQ 173
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 107 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLY 166
Query: 255 LTRLQ 259
L R+Q
Sbjct: 167 LKRMQ 171
>gi|150018635|ref|YP_001310889.1| two component, sigma54 specific, Fis family transcriptional
regulator [Clostridium beijerinckii NCIMB 8052]
gi|149905100|gb|ABR35933.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Clostridium beijerinckii NCIMB 8052]
Length = 472
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVLV DD+L+ +L+ L K YEV T ++AL + +E + YD+ I D+ MP++D
Sbjct: 15 VRVLVADDELSLRMVLQTALNKVGYEVDTVKNGKEALCMAQE--NHYDVAILDIRMPEVD 72
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
G + + ++ +LP+I+M+ G + + ++HGA DY+LKP + E++ I R
Sbjct: 73 GLQAFYEIHKIKPNLPIILMTAFGSSETAVNAMKHGAYDYILKPFNLDEVKIIVSRAIR 131
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
P R+L+VDDD A ++ +L++ Y TT A AL RK Y +VISDV
Sbjct: 4 IAPEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVR 61
Query: 73 MPDMDGFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL-RNIW 130
MP DGF LLE + D VIM++ G+T ++ +++GA DYLLKP ++ EL R I
Sbjct: 62 MPARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIE 121
Query: 131 QHVFRKKIHEVR 142
+ + R+++ R
Sbjct: 122 RALGRRRLELAR 133
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 189 DRDCGDAS--STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVAS 246
D DAS ++K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVAS
Sbjct: 118 DSGTEDASGRTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVAS 177
Query: 247 HLQKYRLYLTRLQ 259
HLQKYRLYL R+Q
Sbjct: 178 HLQKYRLYLKRIQ 190
>gi|38346503|emb|CAE02104.2| OSJNBa0020I02.17 [Oryza sativa Japonica Group]
Length = 376
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 21 LVVDDDLAWLKILEKMLK-KCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+V+D+D ML + ++ VT AL L+ +G D+V++DV+M +M+GF
Sbjct: 1 MVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADVHMEEMNGF 60
Query: 80 KLLEHVGLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK- 136
L+ V E+ + VIMMS + + + V+ GA + KP+ ++N+WQ+V K
Sbjct: 61 DFLK-VARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLWQYVDLKV 119
Query: 137 -KIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDA 195
++ +++D+ G ES + S AEN +D
Sbjct: 120 LRMEKIKDLLQGIGDESTCANETNS---------------------LAENPKND------ 152
Query: 196 SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 255
+ KK ++W+ L +KF+ A+ +G D PK I +M V + +A+HLQK+RL L
Sbjct: 153 -TKKKYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHLQKHRLRL 210
Query: 256 TR 257
T+
Sbjct: 211 TK 212
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 48/76 (63%)
Query: 184 ENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 243
EN DD A + K+ R+VW+ LH++FV V +G PK I+ MNV LTREN
Sbjct: 86 ENWVDDPSSAAARTLKRPRLVWTPQLHKRFVDVVGHLGMKNAVPKTIMQWMNVEGLTREN 145
Query: 244 VASHLQKYRLYLTRLQ 259
VASHLQKYRLYL R Q
Sbjct: 146 VASHLQKYRLYLKRKQ 161
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+VDD+ + E++ + +T+C A AL +L++ D +D+VI+D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+LL ++ E DL VIM++ ++ +Q+GA DY+ KP +EL Q ++
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 139 HEVRDIEN 146
+ ++ N
Sbjct: 134 KQQEEVNN 141
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
+ ++ K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKY
Sbjct: 135 SAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 194
Query: 252 RLYLTRLQ 259
RLYL R+Q
Sbjct: 195 RLYLKRMQ 202
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 181 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
++A++ + ++ K+ R+VW+ LH++FV V +G PK I+ LMNV LT
Sbjct: 125 EEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 184
Query: 241 RENVASHLQKYRLYLTRLQ 259
RENVASHLQKYRLYL R+Q
Sbjct: 185 RENVASHLQKYRLYLKRMQ 203
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 152 ARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLY 211
Query: 255 LTRLQ 259
L R+Q
Sbjct: 212 LKRMQ 216
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
KKAR+VW+ +LH++FV+AV +G PK I+ LMNV LTRENVASHLQKYRLYL RL
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKRL 159
Query: 259 Q 259
Sbjct: 160 H 160
>gi|326796472|ref|YP_004314292.1| Fis family transcriptional regulator [Marinomonas mediterranea
MMB-1]
gi|326547236|gb|ADZ92456.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas mediterranea MMB-1]
Length = 450
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++LVV+DD + LE L Y+ + G + +A+ L +K YD+V+SD+N+P MD
Sbjct: 4 VKLLVVEDDRGLAEALEDTLLLAGYDCSMVGSSEEAI--LSLKKQSYDMVVSDINLPGMD 61
Query: 78 GFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
G+ LL+HV +LP+++M+ G+ + ++ ++ GA DYLLKP EL + Q
Sbjct: 62 GYGLLKHVTDHYPELPIMLMTAYGDIAHAVEAMREGAVDYLLKPFEEAELLEVIQ 116
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+ +D+ L +L+ C YEVTT + AL LR+ +D+V+ D+ MP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 80 KLL------EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+LL E + L LPV++MS DG+ + ++ GA DYL+KP+R +E + + +H+
Sbjct: 69 ELLTLMQEDEKLSL---LPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSDQSVD 165
+ + + +E I G+ +D
Sbjct: 126 SVTASSADKSEKGLHKYEKIRYVDGGATGQID 157
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 182 DAENRHDDRDCGDAS--STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWL 239
DA D D S + K+ R+VW+ LH++FV V +G PK I+ LMNV L
Sbjct: 125 DAAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGL 184
Query: 240 TRENVASHLQKYRLYLTRLQ 259
TRENVASHLQKYRLYL R+Q
Sbjct: 185 TRENVASHLQKYRLYLKRMQ 204
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 160 SDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGD-------ASSTKKARVVWSIDLHQK 212
S Q+ PL T + + ++ D D G A + K+ R+VW+ LH++
Sbjct: 45 SPQAPTPPLPTPQVAPPPPSQPNSAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKR 104
Query: 213 FVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQ 259
FV AV +G PK I+ LM+V LTRENVASHLQKYRLYL R+Q
Sbjct: 105 FVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ 151
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%)
Query: 175 TSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLM 234
T + AE D A + K+ R+VW+ LH++FV AV +G PK I+ LM
Sbjct: 59 TPSQANSSAEFAADSAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 118
Query: 235 NVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKD 274
+V LTRENVASHLQKYRLYL R+Q G + + D
Sbjct: 119 SVDGLTRENVASHLQKYRLYLKRMQSGGGGGGGGNVGESD 158
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 85 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 144
Query: 255 LTRLQ 259
L R+Q
Sbjct: 145 LKRMQ 149
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 183 AENRHDDRDCGDASS-------TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMN 235
AE D D G A + K+ R+VW+ LH++FV AV +G PK I+ LM+
Sbjct: 80 AEYAADSADLGSAGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 139
Query: 236 VPWLTRENVASHLQKYRLYLTRLQ 259
V LTRENVASHLQKYRLYL R+Q
Sbjct: 140 VDGLTRENVASHLQKYRLYLKRMQ 163
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLYL R+
Sbjct: 143 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 202
Query: 259 Q 259
Q
Sbjct: 203 Q 203
>gi|86143810|ref|ZP_01062186.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
gi|85829853|gb|EAQ48315.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
Length = 451
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+++DD+A+ K+LE L K YEV + A +A +L D+VI+DV +PD DG
Sbjct: 3 KILLIEDDVAFCKMLETFLSKKGYEVISAFAAGEAYKILANH--AVDLVITDVRLPDDDG 60
Query: 79 FKLLEHVGLEMD-LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+L+H+ + + +PVI+M+ E ++ ++ ++ GA DY+ KP+R EL I + +
Sbjct: 61 LSILKHIKEDYNNIPVILMTGYAEVNKAVEAMKEGAFDYISKPVRPDELLKIVDKALQAE 120
Query: 138 IHE 140
E
Sbjct: 121 AEE 123
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L VDD+ ++LE L++ Y+ ++AL++LR D D+V+SD++MP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILR--NDNIDLVVSDLHMPVMDG 63
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
KLLE + E +D PVI+++ GE S ++ ++ GA DY+L+P ++ L
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETL 112
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 76 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 135
Query: 255 LTRLQ 259
L R+Q
Sbjct: 136 LKRMQ 140
>gi|376297804|ref|YP_005169034.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
gi|323460366|gb|EGB16231.1| response regulator receiver protein [Desulfovibrio desulfuricans
ND132]
Length = 123
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+VDD+L +L++L K L+K Y VT G + + +LR+ + +D+ + D+ + DMD
Sbjct: 6 IRVLLVDDELGFLEVLAKRLRKRGYAVTAAGSGSEGIRVLRD--NDFDVAVLDLKLEDMD 63
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
G ++L+ + + +LPVIM++ G +GV+ GA DYLLKP + +L
Sbjct: 64 GIEVLQIMKKMVPELPVIMLTGHGSEQAAREGVESGAFDYLLKPCDLDDL 113
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 169 LTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPK 228
+ GE S ++AE+RH + + KKA+V W+ DLH++FV+AV Q+G DK P
Sbjct: 159 VLGEKSPSSTTSQEAESRHKSSN-KHSHGKKKAKVDWTPDLHRRFVQAVEQLGIDKAVPS 217
Query: 229 KILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTS 266
+IL++M + LTR N+ASHLQKYR + + E++ +
Sbjct: 218 RILEIMGIDSLTRHNIASHLQKYRSHRKHMLAREVEAA 255
>gi|315655447|ref|ZP_07908347.1| subtilin biosynthesis regulatory protein SpaR [Mobiluncus curtisii
ATCC 51333]
gi|315490387|gb|EFU80012.1| subtilin biosynthesis regulatory protein SpaR [Mobiluncus curtisii
ATCC 51333]
Length = 224
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ A ++ K LK+ S+ VT C A++AL+L R + +D++I DV M DMDGF
Sbjct: 4 ILVVDDEAAICDVIAKSLKRASFSVTACTSAKEALTL---RLEQFDLMIFDVMMSDMDGF 60
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL-RNIWQHVFRKK 137
+L +V ++D P++ ++ + V++G+ GA DY+ KP EL + H+ R+K
Sbjct: 61 ELCRNVREKVDCPILFLTAKTTETDVIQGLAMGADDYIRKPFTPSELVSRVNAHIRREK 119
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
++T P GL++LV DD+ +ILE L +EV +AL L R + D+V+
Sbjct: 5 SETSRPEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVL 62
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV MP++DGF ++E + + ++P+I+++ G+ + + G+Q GA DY++KP KEL
Sbjct: 63 DVMMPELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEAR 122
Query: 130 WQHVFRK 136
+ V R+
Sbjct: 123 IRCVMRR 129
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 106 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 165
Query: 255 LTRLQ 259
L R+Q
Sbjct: 166 LKRMQ 170
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D A + K+ R+ W+ LH++FV V+ +G PK I+ +MNV LTRENVASHLQK
Sbjct: 141 DAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQK 200
Query: 251 YRLYLTRLQ 259
YRLYL R Q
Sbjct: 201 YRLYLKRTQ 209
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 105 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 164
Query: 255 LTRLQ 259
L R+Q
Sbjct: 165 LKRMQ 169
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 91 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 150
Query: 255 LTRLQ 259
L R+Q
Sbjct: 151 LKRMQ 155
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLYL R+
Sbjct: 143 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 202
Query: 259 Q 259
Q
Sbjct: 203 Q 203
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 92 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 151
Query: 255 LTRLQ 259
L R+Q
Sbjct: 152 LKRMQ 156
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 188 DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 247
D +S ++ R+VW+ LH++FV V +G K PK I++LMNV LTRENVASH
Sbjct: 80 DSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASH 139
Query: 248 LQKYRLYLTRLQ 259
LQKYRLY+ R++
Sbjct: 140 LQKYRLYVKRMR 151
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 189 DRDCGDAS---STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
DRD + + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVA
Sbjct: 117 DRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVA 176
Query: 246 SHLQKYRLYLTRLQ 259
SHLQKYRLYL R+Q
Sbjct: 177 SHLQKYRLYLKRMQ 190
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%)
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D + K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHL
Sbjct: 120 DSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHL 179
Query: 249 QKYRLYLTRLQ 259
QKYRLYL R+Q
Sbjct: 180 QKYRLYLKRMQ 190
>gi|229828178|ref|ZP_04454247.1| hypothetical protein GCWU000342_00235 [Shuttleworthia satelles DSM
14600]
gi|229792772|gb|EEP28886.1| hypothetical protein GCWU000342_00235 [Shuttleworthia satelles DSM
14600]
Length = 250
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+V+DD A +K LE L+ +VT+ G +AL L+ER YD+V+ D+ +PD
Sbjct: 21 IHVLIVEDDPAIVKSLEDFLRGQEMQVTSAGGQEEALQKLQERP--YDLVLLDITLPDGS 78
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL----RNIWQHV 133
G+ + V + PVI ++ G+ + V+ G GA DY+ KP R +EL RN+ +H
Sbjct: 79 GYSVCNAVKRDYQTPVIFLTASGDENSVVTGFDLGAEDYIAKPFRPRELVSRIRNVLRHT 138
Query: 134 FRKK-IHEVRDI 144
R+ I V+D+
Sbjct: 139 KRQSNIERVQDL 150
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 92 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 151
Query: 255 LTRLQ 259
L R+Q
Sbjct: 152 LKRMQ 156
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 192 CGD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQ
Sbjct: 79 AGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 138
Query: 250 KYRLYLTRLQ 259
KYRLYL R+Q
Sbjct: 139 KYRLYLKRMQ 148
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 192 CGD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQ
Sbjct: 82 AGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 141
Query: 250 KYRLYLTRLQ 259
KYRLYL R+Q
Sbjct: 142 KYRLYLKRMQ 151
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+V++D I+ +L+ CSYEV A +L + + DIV+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 78 GF----KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G K+L H ++PVIMMS V K + GA D+L+KPIR EL+ +WQH
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 196 SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 255
+S ++ R+VW+ LH++FV V +G K PK I++LMNV LTRENVASHLQKYRLY+
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASHLQKYRLYV 171
Query: 256 TRLQ 259
R++
Sbjct: 172 KRMR 175
>gi|414077097|ref|YP_006996415.1| two-component response regulator [Anabaena sp. 90]
gi|413970513|gb|AFW94602.1| two-component response regulator [Anabaena sp. 90]
Length = 242
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL + R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|12325328|gb|AAG52609.1|AC016447_18 hypothetical protein; 77882-74563 [Arabidopsis thaliana]
Length = 663
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 29/241 (12%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +L++D D A + L ML++ S V + +A ALS++ ++K ++I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
L + L+ D+P+I+++ + +T + AC L KPI +++N+WQHVF KK
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 138 IHEVRDI------EN--------IEGFESIHMTRSGSDQSVDG--PLL-TGEDLTSVRKR 180
E++ I EN IE F + + S S+ G P + T + +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 181 KDAENRH-----------DDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKK 229
K N +++ S + + +W+ + H KF+ A++ +G + + K
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEVLFKKP 251
Query: 230 I 230
I
Sbjct: 252 I 252
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++L+V+DD+ + L L+ ++V T DALS L++ + YDI++ DVN+PD
Sbjct: 7 VKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQ--NPYDILLLDVNLPDYS 64
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIWQHV 133
G +LL+ + E+ LP I++S G+T + ++GA DY++KPI ++EL IW +
Sbjct: 65 GMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIWVQL 121
>gi|209527854|ref|ZP_03276344.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|376006010|ref|ZP_09783358.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|423064997|ref|ZP_17053787.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
gi|209491711|gb|EDZ92076.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|375325627|emb|CCE19111.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|406714240|gb|EKD09408.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
Length = 243
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L Y+V T +AL + R+ + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFRQTEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 100 ARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLY 159
Query: 255 LTRLQ 259
L R+Q
Sbjct: 160 LRRMQ 164
>gi|345862538|ref|ZP_08814758.1| transcriptional regulator [Desulfosporosinus sp. OT]
gi|344324398|gb|EGW35956.1| transcriptional regulator [Desulfosporosinus sp. OT]
Length = 465
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DD+ A I+ + LK+ YE+ G A + LSLL+E D V+ D+ +PD DG
Sbjct: 6 KILILDDEEALRAIIAQRLKRKGYEIVEAGTAEEGLSLLKETL--IDTVLLDIKLPDGDG 63
Query: 79 FKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
LL + L+ DL V+M++ +G ++ ++HGA DYL KP + EL Q K+
Sbjct: 64 LILLPKIKQLQPDLQVVMLTGNGTIESAIEAMKHGAYDYLTKPCNLSELEITLQKALEKR 123
Query: 138 I 138
+
Sbjct: 124 M 124
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 190 RDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
+ C A KK +V W+ +LHQKFV+AV Q+G DK P +IL+ M V LTR N+ASHLQ
Sbjct: 340 KSCKSAPGRKKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGVKCLTRHNIASHLQ 399
Query: 250 KYRLYLTRLQKDELKTSVGGIKQK--DSPSKDSAASFGIQNSI 290
KYR + L + E + +V ++ D+ SK+ A + Q I
Sbjct: 400 KYRSHRKHLLQREAEAAVNWSHRRHSDTWSKNRAPTQSRQTPI 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL VLV D + + +L+ CSY VT DAL+ + + K + + D
Sbjct: 13 PKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATNR 72
Query: 75 DM-DGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
D+ DGFK+LE +L VIM+S + +M+ + GA D+L KP ++L+NIWQHV
Sbjct: 73 DIFDGFKVLEAAK---ELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQHV 129
Query: 134 FRKKI 138
RK +
Sbjct: 130 ARKAM 134
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ +L ++E +L YEV T AL L R++ D+V++D+ MP M G
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALEL--TRRNDLDLVVTDMKMPRMSGI 61
Query: 80 KLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LLE + + DLPVIMM+ G + ++ ++ GA DY+LKP + +E+
Sbjct: 62 ELLEQLKQVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYILKPFKNEEI 109
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 196 SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 255
+S ++ R+VW+ LH++FV V +G K PK I++LMNV LTRENVASHLQKYRLY+
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNVEGLTRENVASHLQKYRLYV 171
Query: 256 TRLQ 259
R++
Sbjct: 172 KRMR 175
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 86 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 145
Query: 255 LTRLQ 259
L R+Q
Sbjct: 146 LKRMQ 150
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 192 CGD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQ
Sbjct: 70 TGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 129
Query: 250 KYRLYLTRLQ 259
KYRLYL R+Q
Sbjct: 130 KYRLYLKRMQ 139
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
CG KKAR+VW+ +LH +FV+AV +G PK I+ LMNV LTRENVASHLQKY
Sbjct: 103 CG-----KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKY 157
Query: 252 RLYLTRLQ 259
RLYL R +
Sbjct: 158 RLYLKRTR 165
>gi|87119489|ref|ZP_01075386.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
gi|86164965|gb|EAQ66233.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+V+DD + LE L +Y A DA+ LRE+ +D+V+SDVN+P MDG+
Sbjct: 6 LLIVEDDKELAEALEDTLMLANYHCVLAYSAEDAVLALREQ--AFDMVVSDVNLPGMDGY 63
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
LL HV + DLP+++M+ G+ + ++ ++ GA DYLLKP + EL
Sbjct: 64 GLLSHVIEKYPDLPIMLMTAFGDIAHAVEAMREGAVDYLLKPFQADEL 111
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 99 ARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLY 158
Query: 255 LTRLQ 259
L R+Q
Sbjct: 159 LRRMQ 163
>gi|159900549|ref|YP_001546796.1| two component transcriptional regulator [Herpetosiphon aurantiacus
DSM 785]
gi|159893588|gb|ABX06668.1| two component transcriptional regulator, winged helix family
[Herpetosiphon aurantiacus DSM 785]
Length = 248
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 6 SSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-Y 64
++ R++ NP ++LV DDD A L+++E L Y++ T +AL + R DG Y
Sbjct: 7 TNERHEDNNPHQRKILVADDDPAILRLVEVALSGQRYQLVTVSNGLEALKMYR---DGEY 63
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
+++ DV MP +DGF + E + D+P+I+++ T V+ G + GA DY+ KP R
Sbjct: 64 QLLLIDVMMPYIDGFTVTERIRARSDVPIIIITARDGTDDVVHGFELGADDYITKPFRTA 123
Query: 125 ELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGP----LLTGEDL 174
EL+ + + R+ +E + ++ + R G D +D P LL GED+
Sbjct: 124 ELQARVEAIIRR-------VEGYQHRKASPIVRIG-DLEIDEPRHKVLLAGEDV 169
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
K+ R+VW+ LH++FV V +G PK I+ +MNV LTRENVASHLQKYRLYL R+
Sbjct: 143 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTRENVASHLQKYRLYLKRM 202
Query: 259 Q 259
Q
Sbjct: 203 Q 203
>gi|440682389|ref|YP_007157184.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
gi|428679508|gb|AFZ58274.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
Length = 242
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL + R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 18/141 (12%)
Query: 144 IENIEGFESIHMTRSGSDQSVDGPLLT----GEDLTSVRKRKDAENRHD-------DRDC 192
I+N+E E I T S S V L T GE++ S +K +++ + + + D
Sbjct: 102 IKNVERKEEIEKTGSVSASDVGSGLTTSLNQGEEIVSTQKSEESTQQRNQNIVTPKESDK 161
Query: 193 GDASST-------KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
G SS +K +V W+ +LH++FV+AV Q+G DK P +IL++M + LTR N+A
Sbjct: 162 GKKSSKNHNLPGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIA 221
Query: 246 SHLQKYRLYLTRLQKDELKTS 266
SHLQKYR + L E++ +
Sbjct: 222 SHLQKYRSHRKHLLAREVEAA 242
>gi|146298401|ref|YP_001192992.1| two component sigma-54 specific Fis family transcriptional
regulator [Flavobacterium johnsoniae UW101]
gi|146152819|gb|ABQ03673.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Flavobacterium johnsoniae UW101]
Length = 453
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LV++DD+++ K+LEK L K YEV+ A +A +++ + + +D++++D+ +PD DG
Sbjct: 3 KILVIEDDISFCKLLEKFLTKNKYEVSVAFSASEARAII--KNESFDLILTDLRLPDSDG 60
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
L+ E +PVI+M+ + + +K +++GA DY+ KP E+ + + +
Sbjct: 61 IGLMSEFKNEYPQVPVILMTGYSDVNTAVKAIKNGAADYISKPFNPDEVLLVITNALQTS 120
Query: 138 IHEVRDIEN-IEGFESIHMTRSGSDQSVDG 166
E +IE ++ +++ T S ++ V G
Sbjct: 121 KEEQEEIETPVKQKKAVKKTASTENEFVKG 150
>gi|86606063|ref|YP_474826.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
gi|86554605|gb|ABC99563.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
Length = 243
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L Y+V T +AL + R K D+V+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFR--KQDPDLVVLDVMMPKLDG 65
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|320333135|ref|YP_004169846.1| response regulator receiver and SARP domain-containing protein
[Deinococcus maricopensis DSM 21211]
gi|319754424|gb|ADV66181.1| response regulator receiver and SARP domain protein [Deinococcus
maricopensis DSM 21211]
Length = 343
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
RVLVVDDD A LK++ +L + +EV TC +AL LL D+VISDV MP M G
Sbjct: 3 RVLVVDDDAAILKLVSVILTRAGHEVRTCAHPNEALDLLNVMTP--DLVISDVVMPYMTG 60
Query: 79 FKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
++ LEHV + DLP +++S E V +G+ GA DYL KP +L + R
Sbjct: 61 YEFLEHVRAQPNMADLPFMLLSSHAERDDVRRGMNLGADDYLPKPFTPHDLTSAVDARLR 120
Query: 136 KKIHEVRDIENIEG 149
+ +V+ +E
Sbjct: 121 RAGQKVQAQSGLEA 134
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 13/181 (7%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
+ VLV +DD L +L C Y+VT R A L ++ DIV+ D+ MP+M
Sbjct: 2 NIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPEM 61
Query: 77 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
DGF+LL EH L+ +PVIMMS D E +V + GA DY+ KP+R++ ++ I ++
Sbjct: 62 DGFELLSLMQEHENLQ-KIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKY 120
Query: 133 VFRK----KIHEVRDIENIEGFESIHMTRSGSDQSV---DGPLLTGEDLTSVRKRKDAEN 185
V K K + I+ + +++ SGS + V DG L + + S++ D E
Sbjct: 121 VQYKDQGDKNSNLVGIQQYKVLKTLGQGASGSVELVQKNDGNLYALKTI-SMKYMNDTEK 179
Query: 186 R 186
R
Sbjct: 180 R 180
>gi|182412142|ref|YP_001817208.1| two component transcriptional regulator [Opitutus terrae PB90-1]
gi|177839356|gb|ACB73608.1| two component transcriptional regulator, winged helix family
[Opitutus terrae PB90-1]
Length = 241
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 6 SSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYD 65
SSPR+ P RVL++DDD +L + L++ + V RD L L+ D D
Sbjct: 4 SSPRSAKRRPDPTRVLIIDDDERLTALLTEYLRRFGFTVRAAAHPRDGLRALK--ADPPD 61
Query: 66 IVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE 125
+VI DV +PD DG + V + +P+IM++ G+ + + G++ GA DYL KP +E
Sbjct: 62 LVILDVMLPDTDGLAVCREVRADSRIPIIMLTARGDVTDRIVGLEMGADDYLPKPFEPRE 121
Query: 126 LRNIWQHVFRKKIHEVRDIENIEGFESIHMTRS 158
L Q V R+ + + + E TRS
Sbjct: 122 LVARIQAVLRRGTRDDAEALRLGALEVNWTTRS 154
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
+K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLY+ R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKR 200
Query: 258 LQ 259
+Q
Sbjct: 201 MQ 202
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 175 TSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLM 234
++ ++AE+RH ++ KKA+V W+ +LH++FV+AV Q+G DK P +IL++M
Sbjct: 164 STASSSQEAESRHKSSRKKNSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIM 223
Query: 235 NVPWLTRENVASHLQKYRLYLTRLQKDELKTS 266
+ LTR N+ASHLQKYR + + E + +
Sbjct: 224 GIDSLTRHNIASHLQKYRSHRKHMLAREAEAA 255
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 197 STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 256
++K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLY+
Sbjct: 111 TSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 170
Query: 257 RLQ 259
R+Q
Sbjct: 171 RMQ 173
>gi|282898472|ref|ZP_06306462.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
gi|281196638|gb|EFA71544.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
Length = 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KANPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|75908099|ref|YP_322395.1| two component transcriptional regulator [Anabaena variabilis ATCC
29413]
gi|427709346|ref|YP_007051723.1| winged helix family two component transcriptional regulator [Nostoc
sp. PCC 7107]
gi|427715805|ref|YP_007063799.1| winged helix family two component transcriptional regulator
[Calothrix sp. PCC 7507]
gi|75701824|gb|ABA21500.1| two component transcriptional regulator, winged helix family
[Anabaena variabilis ATCC 29413]
gi|427348241|gb|AFY30965.1| two component transcriptional regulator, winged helix family
[Calothrix sp. PCC 7507]
gi|427361851|gb|AFY44573.1| two component transcriptional regulator, winged helix family
[Nostoc sp. PCC 7107]
Length = 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSDPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LMNV LTRENVASHLQKYRLY
Sbjct: 103 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLY 162
Query: 255 LTRLQ 259
L R+Q
Sbjct: 163 LKRMQ 167
>gi|119511035|ref|ZP_01630155.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
gi|119464286|gb|EAW45203.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
Length = 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
G S+ KK +V W+ +LH+KFV+AV Q+G D+ P +ILDLM V LTR NVASHLQKYR
Sbjct: 309 GTKSNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKYR 368
Query: 253 LYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 305
++ ++ E++ + DS + I + +H N V+ GG +
Sbjct: 369 MHRKQILPKEVERRWPNPQPIDSVQRSYYPHKPIM-TFPQYHSNHVAPGGQFY 420
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL+VL++D+D ++ L+K Y V + +AL+ + + +G+ + I +V+
Sbjct: 15 PKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSAG 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+ DG +L + DLP IM S S +MK + GA ++L KP+ +L+NIWQHV
Sbjct: 75 NSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHVV 132
Query: 135 RKKIHEVRDI 144
K + +D+
Sbjct: 133 HKAFNTRKDV 142
>gi|186685833|ref|YP_001869029.1| two component transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186468285|gb|ACC84086.1| two component transcriptional regulator, winged helix family
[Nostoc punctiforme PCC 73102]
Length = 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|434406928|ref|YP_007149813.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
gi|428261183|gb|AFZ27133.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
Length = 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|268316364|ref|YP_003290083.1| Fis family two component sigma-54 specific transcriptional
regulator [Rhodothermus marinus DSM 4252]
gi|262333898|gb|ACY47695.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus DSM 4252]
Length = 472
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+VDD+ + E++ + +T+C A A+ +L++ D +D+VI+D MPDMDG
Sbjct: 11 ILLVDDEHLLHTLFERLFTRHGLRLTSCYNALQAMEVLKKEADAFDLVITDFKMPDMDGL 70
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF--RK 136
+LL ++ E DL VIM++ ++ +Q+GA DY+ KP +EL Q R+
Sbjct: 71 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 130
Query: 137 KIHEVR 142
+ E R
Sbjct: 131 EQQEAR 136
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 43/59 (72%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
KK R+VW+ +LH +F+ AV +G PK IL LMNV +TRENVASHLQKYRLYL R
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 59
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 50/63 (79%)
Query: 196 SSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 255
++ KK RV+W+ +LH KF+ AV+ +G ++ PKKILDLMNV LTRENVASHLQK+R+ L
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVAL 60
Query: 256 TRL 258
++
Sbjct: 61 KKV 63
>gi|428772622|ref|YP_007164410.1| winged helix family two component transcriptional regulator
[Cyanobacterium stanieri PCC 7202]
gi|428686901|gb|AFZ46761.1| two component transcriptional regulator, winged helix family
[Cyanobacterium stanieri PCC 7202]
Length = 248
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L Y+V T DA++ E + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEDAIATFHETQP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|17231314|ref|NP_487862.1| two-component response regulator [Nostoc sp. PCC 7120]
gi|17132956|dbj|BAB75521.1| two-component response regulator [Nostoc sp. PCC 7120]
Length = 242
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KSDPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|402299077|ref|ZP_10818716.1| two-component response regulator [Bacillus alcalophilus ATCC 27647]
gi|401725776|gb|EJS99044.1| two-component response regulator [Bacillus alcalophilus ATCC 27647]
Length = 232
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+VDD+ +L + +E+TT G ++AL L++E++ +D+++ D+ MP+M+G
Sbjct: 3 KILIVDDEKQMQSLLCVCIGSSEFELTTAGSGKEALELIKEQQ--FDLMLLDIMMPEMNG 60
Query: 79 FKLL-EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
F++L E E+ +P I++S GET +V++G+ GA DY+ KP KEL V R +
Sbjct: 61 FQVLKELTEKELLVPTIIISAIGETDQVVEGLNLGASDYITKPFEPKELVARVNSVLR-R 119
Query: 138 IHEVRDIENIEGFESIHMTRS 158
+ ++ +E +G I + S
Sbjct: 120 VEPLQQVEKRKGMFGITIDHS 140
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
C + KKAR+ W+ +LH +FV AV +G PK I+ LMNV LTRENVASHLQKY
Sbjct: 189 CRGGRAEKKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVEGLTRENVASHLQKY 248
Query: 252 RLYLTRLQKDELKTSVG 268
R+YL K + ++ G
Sbjct: 249 RIYL----KQQARSPAG 261
>gi|428301223|ref|YP_007139529.1| winged helix family two component transcriptional regulator
[Calothrix sp. PCC 6303]
gi|428237767|gb|AFZ03557.1| two component transcriptional regulator, winged helix family
[Calothrix sp. PCC 6303]
Length = 242
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 18/134 (13%)
Query: 178 RKRKDAE-NRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMN 235
RK +D + N H+ G S T+ R VW+++LHQKFV AV Q+G DK P++I LMN
Sbjct: 27 RKEEDGKGNEHN----GMESCTRMKRTVWTVELHQKFVNAVQQLGGVDKASPEQIHALMN 82
Query: 236 VPWLTRENVASHLQKYRLYLTRL---QKDELKTS----VGGIKQKDSPSKDSAASFGIQN 288
V L NVASHLQKYRLYL ++ Q+ + T G +PS +SF
Sbjct: 83 VEGLPVINVASHLQKYRLYLKKIDEGQQLYMATRQLLLSAGSHLPQTPSTKHCSSF---- 138
Query: 289 SITVHHHNDVSNGG 302
I HH + SN
Sbjct: 139 -IQQGHHQNSSNSA 151
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query: 196 SSTKK--ARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYR 252
S T+K RVVWS +LHQKF+ A++Q+G DK PKKIL +MNV LTR NVA+HLQKYR
Sbjct: 334 SRTRKNHGRVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQKYR 393
>gi|282898613|ref|ZP_06306601.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
gi|281196481|gb|EFA71390.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
Length = 242
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KADPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|357632197|ref|ZP_09130075.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
gi|357580751|gb|EHJ46084.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
Length = 453
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L VDDD L++LE L Y+V T G +AL +L +R +VISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 80 KLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+LLE + + LP+I ++ G ++ ++HGA DYL KP +EL VF +
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLTRVTEVFAR 126
>gi|406596174|ref|YP_006747304.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407683118|ref|YP_006798292.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407687035|ref|YP_006802208.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|406373495|gb|AFS36750.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407244729|gb|AFT73915.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407290415|gb|AFT94727.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 446
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE-RKDGYDIVISDVNMPDMDG 78
+L+VDDD + L++L L+ YEVT D S LR+ + D YD+V+SD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYEVTAV---EDGQSALRKLQNDNYDVVLSDLRMPGLDG 67
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + G+ D+PVI+M+ G + + Q G +L KP+ ELR + Q
Sbjct: 68 LSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQKAL 124
>gi|392954660|ref|ZP_10320211.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
gi|391857317|gb|EIT67848.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
Length = 457
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LR+LVVDD+ ++LE ML + ++ + G + A LLRE G+D+VISD+ MP ++
Sbjct: 10 LRILVVDDEANMRRVLEIMLSRRGHKTVSAGDGQAAFELLRE--GGFDLVISDLRMPVVN 67
Query: 78 GFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
G +LL + + +P+IM++ G ++ ++ GACDYLL+P ++ L V R
Sbjct: 68 GIELLAKLREAGIGVPLIMITAQGSIESAVEAMRLGACDYLLRPFDVEALDLAINRVLR 126
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL+VL++D+D + ++ L+K Y V T +ALS + + +G+ + I +V+
Sbjct: 15 PKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSAG 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
D DG +L+ + +LP IM S S +MK + GA ++L KP+ +L+NIWQHV
Sbjct: 75 DNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHVV 132
Query: 135 RKKIHEVRDI 144
K + +D+
Sbjct: 133 HKAFNARKDV 142
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
G S+ KK +V W+ +LH+KFV+AV Q+G D+ P +ILD+M V LTR N+ASHLQKYR
Sbjct: 309 GTKSNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASHLQKYR 368
Query: 253 LYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGG 302
++ ++ E++ + +DS ++ + + +H N V+ G
Sbjct: 369 MHRRQILPREVERRWPHPQPRDSVQRNYYPHKPVM-TFPPYHSNHVAPAG 417
>gi|354568271|ref|ZP_08987436.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
gi|353540634|gb|EHC10107.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
Length = 242
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KTDPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|386393158|ref|ZP_10077939.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385734036|gb|EIG54234.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 453
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L VDDD L++LE L Y+V T G +AL +L +R +VISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 80 KLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+LLE + + LP+I ++ G ++ ++HGA DYL KP +EL VF +
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLTRVTEVFAR 126
>gi|119357584|ref|YP_912228.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium phaeobacteroides
DSM 266]
gi|119354933|gb|ABL65804.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium phaeobacteroides
DSM 266]
Length = 931
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 7 SPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI 66
S R D G +L VDD+LA ++I+E+M+ + +++ +C AL L R+ + +D+
Sbjct: 798 SARADVAKGKGC-ILFVDDELATIRIMERMMTRIGFKIQSCSSPLQALELFRKNPETFDL 856
Query: 67 VISDVNMPDMDGFKLL-EHVGLEMDLPVIMMSVDGETSRVMKGVQH-GACDYLLKPIRMK 124
VI+D+ MP+M G L E + LP+I+M+ GE M + G C L KP+ M
Sbjct: 857 VITDLTMPEMTGIALAGELRKISSRLPIILMTGYGEEIETMSSLSLVGICKLLKKPVNMA 916
Query: 125 ELRNIWQHVFRKK 137
EL + + V K
Sbjct: 917 ELISAVKEVILHK 929
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD-----GYD 65
D +P LRVLVVD + + + +L+KC+Y+V +AL LL++++ G D
Sbjct: 744 DILSPQSLRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLLKDQQARDGAPGVD 803
Query: 66 IVISDVNMPDMDGFKLLEHVGLEMDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPI 121
+++ + + P + +LL LE D+ PV++MS + ++ +Q GA DY+++P+
Sbjct: 804 LILKEHDPPAANACRLLRRT-LEDDVLRTVPVVVMSSQEDRDVMVACLQLGAADYMIRPL 862
Query: 122 RMKELRNIWQHVF 134
R ELRN+W V+
Sbjct: 863 RHNELRNLWARVY 875
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 189 DRDCG---DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 245
+RD G + +K+ R+VW+ LH +F+ AV ++G PK I+ +MNV LTRENVA
Sbjct: 95 ERDIGVEREVELSKRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVA 154
Query: 246 SHLQKYRLYLTRLQKDELKTSVGG 269
SHLQKYRL L R Q T G
Sbjct: 155 SHLQKYRLTLKRAQDSSESTRASG 178
>gi|298490023|ref|YP_003720200.1| winged helix family two component transcriptional regulator
['Nostoc azollae' 0708]
gi|298231941|gb|ADI63077.1| two component transcriptional regulator, winged helix family
['Nostoc azollae' 0708]
Length = 242
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|427729957|ref|YP_007076194.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
gi|427365876|gb|AFY48597.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
Length = 242
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KADPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|402698894|ref|ZP_10846873.1| DNA-binding response regulator [Pseudomonas fragi A22]
Length = 242
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 13 FNPAGL---RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
NP + R+L ++DD L + L +C +EV C ++ L+ R R++ +D+V+
Sbjct: 1 MNPVAVSPSRLLAIEDDPVLGAYLHEQLLRCGFEVVWCQNGQEGLA--RARQEPFDVVLM 58
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D+ +P M+G ++L + LPVI+MS G + + G Q GA DYL KP M ELR
Sbjct: 59 DILLPGMNGLQVLTQLRQTHALPVILMSALGAEADRISGFQLGADDYLPKPFSMAELRVR 118
Query: 130 WQHVFRK 136
Q + R+
Sbjct: 119 IQAILRR 125
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL++DDD + L++ Y V+T +ALS + + + + + I +V+
Sbjct: 15 PKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVSTG 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+ FK LE DLP IM+S S +MK + GA ++L KP+ +LRNIWQHV
Sbjct: 75 NNGSFKFLETA---KDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSEDKLRNIWQHVV 131
Query: 135 RK 136
K
Sbjct: 132 HK 133
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
CG ++ KK +V W+ +LH+KFV+AV Q+G D+ P +IL+LM V LTR NVASHLQKY
Sbjct: 308 CGTRANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKY 367
Query: 252 RLY 254
R++
Sbjct: 368 RMH 370
>gi|332709113|ref|ZP_08429081.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
gi|332352119|gb|EGJ31691.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
Length = 242
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL+ R+ + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALNTFRDTEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|168059575|ref|XP_001781777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669163|gb|AAV54520.1| golden 2-like protein 1 [Physcomitrella patens]
gi|162666779|gb|EDQ53425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 511
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 184 ENRHDDRDCGDAS-STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRE 242
EN+ + C A+ KKA+V W+ +LH++FV AV Q+G +K P +IL+LM V LTR
Sbjct: 205 ENQQSPKSCKSAAPGKKKAKVDWTPELHRRFVHAVEQLGVEKAFPSRILELMGVQCLTRH 264
Query: 243 NVASHLQKYRLYLTRLQKDELKTS 266
N+ASHLQKYR + L E + +
Sbjct: 265 NIASHLQKYRSHRRHLAAREAEAA 288
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 50 ARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVM 106
+ A + L ++ + D+V+++V MP + G LL + + ++PVIMMS + S V
Sbjct: 43 GQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSDDMSTVF 102
Query: 107 KGVQHGACDYLLKPIRMKELRNIWQHVFRKKIH 139
K + GA D+L+KPIR EL+N+WQHV+R++ H
Sbjct: 103 KCLSKGAVDFLVKPIRKNELKNLWQHVWRQRCH 135
>gi|407474743|ref|YP_006789143.1| two-component response regulator [Clostridium acidurici 9a]
gi|407051251|gb|AFS79296.1| two-component response regulator [Clostridium acidurici 9a]
Length = 188
Score = 79.3 bits (194), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVV+DD+ +++ L K Y +T ++ L ++ K YD+VI D+ MP+MDG
Sbjct: 4 KILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQKNK--YDLVIVDIMMPEMDG 61
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIWQHVFRKK 137
F L +++ ++ D+P+++MS + +KG+ GA DY+ KP + EL I H+ R K
Sbjct: 62 FTLCKNIRMKSDIPILIMSAKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYK 121
>gi|392409544|ref|YP_006446151.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
gi|390622680|gb|AFM23887.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
Length = 139
Score = 79.3 bits (194), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
RVL+VDD+ +L+ L K LKK +VT+ R AL +++ D D+V+ DV MPDMD
Sbjct: 4 FRVLLVDDETEFLETLVKRLKKRKLDVTSADSGRKALEIIQS--DPIDVVVLDVRMPDMD 61
Query: 78 GFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
G + L+ + L+ + VIM++ ++G++ GA DYL+KP+ + EL Q +++
Sbjct: 62 GLETLKEIKRLKPSIEVIMLTGHASVEVAIQGMELGAFDYLMKPMDIDELLFKLQDAYKR 121
Query: 137 K 137
K
Sbjct: 122 K 122
>gi|83647863|ref|YP_436298.1| sigma 54-dependent transcriptional activator [Hahella chejuensis
KCTC 2396]
gi|83635906|gb|ABC31873.1| sigma 54-dependent transcriptional activator containing CheY-like
receiver domain [Hahella chejuensis KCTC 2396]
Length = 467
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+V+DDL L L L+ Y+ AR+ALS+L +R D++ISDVNMP M+GF
Sbjct: 6 LLIVEDDLELLDALTTTLEMNGYDYIGVDSAREALSVLEQR--AVDMIISDVNMPGMNGF 63
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
+L+ V + +PV++M+ G+ S+ + +Q GA DYL+KP
Sbjct: 64 ELMLEVRRQYPGVPVVLMTAYGQISQAVAAMQSGAADYLVKP 105
>gi|343512279|ref|ZP_08749414.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
gi|342795682|gb|EGU31393.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
Length = 252
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+V+DDL L +L+ SY VT AL+LL+ R+ +D+++ DVN+P++DGF
Sbjct: 26 ILLVEDDLNLNHQLTALLQANSYTVTNLECGAQALTLLKMRQ--FDLILLDVNVPNIDGF 83
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
LL++V PVIM++ G +KG+++GA DY+ KP +E++ + V R+
Sbjct: 84 GLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRNGADDYISKPCNFEEVKLRIEAVLRR 140
>gi|347733397|ref|ZP_08866457.1| response regulator [Desulfovibrio sp. A2]
gi|347517853|gb|EGY25038.1| response regulator [Desulfovibrio sp. A2]
Length = 146
Score = 79.0 bits (193), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 6 SSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYD 65
S P PA +R+L+VDD+ ++++++K L + Y V T G +AL LR YD
Sbjct: 13 SPPDGGLGGPAPVRLLLVDDEAGFIRVMQKRLARRGYVVDTAGSGGEALRTLRGAT--YD 70
Query: 66 IVISDVNMPDMDGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
+ D+ M DMDGF+LL V + ++ VIM++ G +G++ GA YLLKP M+
Sbjct: 71 AAVFDLKMDDMDGFELLRVVRRMAPEMAVIMLTGHGGAEEAREGMRLGAAGYLLKPCEME 130
Query: 125 EL 126
+L
Sbjct: 131 DL 132
>gi|443322742|ref|ZP_21051758.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Gloeocapsa sp. PCC 73106]
gi|442787495|gb|ELR97212.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Gloeocapsa sp. PCC 73106]
Length = 244
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL++ E D+V+ DV MP +DG
Sbjct: 9 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALAVFHETHP--DLVVLDVMMPKLDG 66
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 67 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 124
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 192 CGD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQ
Sbjct: 71 TGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 130
Query: 250 KYRLYLTRLQ 259
KYRLYL R++
Sbjct: 131 KYRLYLKRMK 140
>gi|304569547|ref|NP_441728.2| OmpR subfamily protein [Synechocystis sp. PCC 6803]
gi|407961633|dbj|BAM54873.1| OmpR subfamily [Bacillus subtilis BEST7613]
Length = 243
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L YEV T +A++ E D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|170077600|ref|YP_001734238.1| two-component DNA binding response regulator [Synechococcus sp. PCC
7002]
gi|169885269|gb|ACA98982.1| Two-component DNA binding response regulator [Synechococcus sp. PCC
7002]
Length = 242
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L YEV T +AL+ E D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEADP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 191 DCGDASS--TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
DC A++ KK +V W+ DLH+KFV+AV Q+G DK P +IL++MNV LTR NVASHL
Sbjct: 133 DCLSANNEIKKKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHL 192
Query: 249 QKYRLYLTRLQKDELKTSVGGIKQ 272
QKYR + L E + + +++
Sbjct: 193 QKYRSHRKHLLAREAEAASWNLRR 216
>gi|427735900|ref|YP_007055444.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
gi|427370941|gb|AFY54897.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
Length = 242
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KAIPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 79.0 bits (193), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG--YDIVISDVN 72
P+ LR+LVVD + ++L++C+Y+VT AR+ L L E + G +D+V+ +
Sbjct: 1500 PSKLRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGANFDLVLKEHE 1559
Query: 73 MPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
P + +LL+ + L PV++ S E VM + GA DYL+KP+R ELR+I
Sbjct: 1560 PPSANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNELRHI 1619
Query: 130 WQHVF 134
W V+
Sbjct: 1620 WTRVW 1624
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV+ V +G PK I+ LMNV LTR+NVASHLQKYRLY
Sbjct: 120 ARALKRPRLVWTPQLHKRFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASHLQKYRLY 179
Query: 255 LTRL 258
L R+
Sbjct: 180 LKRM 183
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 192 CGD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 249
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQ
Sbjct: 71 TGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 130
Query: 250 KYRLYLTRLQ 259
KYRLYL R++
Sbjct: 131 KYRLYLKRMK 140
>gi|422302664|ref|ZP_16390025.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|425442909|ref|ZP_18823143.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|425472686|ref|ZP_18851527.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
gi|389715919|emb|CCH99776.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|389788043|emb|CCI16590.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|389881212|emb|CCI38224.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
Length = 242
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|428223345|ref|YP_007107515.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
gi|427996685|gb|AFY75380.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 7502]
Length = 242
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T G +A+++ R+ + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAGDGEEAIAMFRD--EIPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ + + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALSDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|452972816|gb|EME72643.1| two-component response regulator [Bacillus sonorensis L12]
Length = 222
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L VDDD A L+++ KML +EVTT +D + E + Y++++ DV MPD DG
Sbjct: 3 KILAVDDDAAILRLVRKMLSIKKHEVTTLQSIKD---ITIEELNKYNLILLDVMMPDEDG 59
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
FK+ E + +D+P+I M+ + S ++KG+ G DY++KP + E+
Sbjct: 60 FKICEKIRSLIDIPIIFMTAKSDESSIIKGLSIGGDDYIVKPFSIHEV 107
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|397904466|ref|ZP_10505377.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
gi|397162476|emb|CCJ32711.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
Length = 225
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD+ +LE L+K Y+V DAL + +ER+ D+++ DV MP +DG
Sbjct: 4 RILIVDDDVNICDLLEIYLEKEGYKVYKANSGVDALKIFKERQ--LDLIVLDVMMPGLDG 61
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
++ L+ + +PV+M++ GET + G++ GA DY++KP KEL + V R+
Sbjct: 62 YETLKEIRKTSAIPVVMLTAKGETFDRVLGLELGADDYIVKPFEPKELVARIRAVLRR 119
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+VLVVDDD ++L K+L++ ++V + AL +LRE + Y +++ DV MPDMDG
Sbjct: 91 KVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDMDG 150
Query: 79 FKLLE--HVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
+LL+ D+P+IM+S + + + Q GA D+L KP++++ L+
Sbjct: 151 LQLLKIFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILK 201
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
D+V+++V +P M GF LL + +E D +PVIMMS + S V K + GA D+L+KP
Sbjct: 2 DLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 121 IRMKELRNIWQHVFRKKIHEVR-DIENIEGFESI 153
IR ELRN+WQHV+RK++ D++ I+ E++
Sbjct: 61 IRKNELRNLWQHVWRKQLANGEIDVQQIQQEENV 94
>gi|410632594|ref|ZP_11343249.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
gi|410147831|dbj|GAC20116.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
Length = 448
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VL+VDDD + L+++ LK Y V + ++AL L+ + +D+V+SD+ MP +DG
Sbjct: 11 VLLVDDDESLLRLMAIRLKGEGYNVQSASGGKEALKLINTQ--NFDVVLSDLRMPGLDGL 68
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
L E + GL D+PVI+M+ G ++ Q G +L KPI ELR++ +K +
Sbjct: 69 SLFEEIMGLRKDVPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHDELRSL----MKKAV 124
Query: 139 HEVRDIENIEGFESIHMTRS 158
+ + +N + E I +TRS
Sbjct: 125 SQSQGAQNGKWCEKI-ITRS 143
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVAS LQKYRLY
Sbjct: 96 ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASQLQKYRLY 155
Query: 255 LTRLQ 259
L R+Q
Sbjct: 156 LKRMQ 160
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
CG ++ KK +V W +LH+KFV+AV Q+G D+ P +IL+LM V LTR NVASHLQKY
Sbjct: 314 CGTRANRKKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKY 373
Query: 252 RLY 254
R++
Sbjct: 374 RMH 376
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL++DDD + L++ Y V+T +ALS + + + + + I +V+
Sbjct: 15 PKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVSTG 74
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGV------QHGACDYLLKPIRMKELRN 128
+ FK LE DLP I + + + V Q GA ++L KP+ +LRN
Sbjct: 75 NNGSFKFLETA---KDLPTIRAGMHFLLTISLMDVFDNQMFQLGAVEFLRKPLSEDKLRN 131
Query: 129 IWQHVFRK 136
IWQHV K
Sbjct: 132 IWQHVVHK 139
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
D+V+++V +P M GF LL + +E D +PVIMMS + S V K + GA D+L+KP
Sbjct: 2 DLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 121 IRMKELRNIWQHVFRKKIHEVR-DIENIEGFESI 153
IR ELRN+WQHV+RK++ D++ I+ E++
Sbjct: 61 IRKNELRNLWQHVWRKQLANGEIDVQQIQQEENV 94
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 134 FRK 136
+R+
Sbjct: 152 WRR 154
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|393772702|ref|ZP_10361104.1| two component transcriptional regulator [Novosphingobium sp. Rr
2-17]
gi|392721786|gb|EIZ79249.1| two component transcriptional regulator [Novosphingobium sp. Rr
2-17]
Length = 255
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE--RKDGYDIV 67
ND+ P ++L+VDD+ A + L + L + +EV+ C A DA + LRE + +D+V
Sbjct: 9 NDSTAP---KLLLVDDEAALREPLAEYLARQGFEVSQCSSAADARNRLREAQHESRFDLV 65
Query: 68 ISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
+ D+ MP DG L H+ DLPVI ++ GE + + G++ GA DY++KP +EL
Sbjct: 66 LLDIMMPGEDGLSLCRHLVEAQDLPVIFLTARGEATDRIVGLEIGADDYVVKPFEPRELV 125
Query: 128 NIWQHVFRKKIH 139
+ V R+ +
Sbjct: 126 ARIRSVLRRALR 137
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 134 FRK 136
+R+
Sbjct: 151 WRR 153
>gi|428769888|ref|YP_007161678.1| winged helix family two component transcriptional regulator
[Cyanobacterium aponinum PCC 10605]
gi|428684167|gb|AFZ53634.1| two component transcriptional regulator, winged helix family
[Cyanobacterium aponinum PCC 10605]
Length = 244
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T DA++ E + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEDAIATFHETQP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 134 FRK 136
+R+
Sbjct: 151 WRR 153
>gi|440753439|ref|ZP_20932642.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443651756|ref|ZP_21130689.1| response regulator [Microcystis aeruginosa DIANCHI905]
gi|440177932|gb|ELP57205.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443334397|gb|ELS48909.1| response regulator [Microcystis aeruginosa DIANCHI905]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|410613157|ref|ZP_11324225.1| transcriptional regulatory protein zraR [Glaciecola psychrophila
170]
gi|410167299|dbj|GAC38114.1| transcriptional regulatory protein zraR [Glaciecola psychrophila
170]
Length = 448
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
+ N + VL+VDDD + L+++ LK Y V + G ++AL L+ + +D+V+SD
Sbjct: 2 NQLNTSDPNVLLVDDDESLLRLMAIRLKGEGYNVQSAGGGKEALRLINTQN--FDVVLSD 59
Query: 71 VNMPDMDGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
+ MP +DG L E + L D+PVI+M+ G ++ Q G +L KPI ELR++
Sbjct: 60 LRMPGLDGLNLFEEIMALGKDVPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHDELRSL 119
Query: 130 WQHVFRKKIHEVRDIENIEGFESIHMTRS 158
+K + + + +N + E I +TRS
Sbjct: 120 ----MKKAVSQSQGAQNGQWCEKI-ITRS 143
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 193 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYR 252
G + KK R+ WS +LH +F+ A+ Q+G PK IL LMNV LTRENVASHLQKYR
Sbjct: 849 GTCKAPKKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYR 908
Query: 253 LYLTR 257
+ L R
Sbjct: 909 ILLKR 913
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 182 DAENRHDDRDCGDAS-STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 240
+AE+RH + G +S KKA+V W+ +LH++FV+AV Q+G DK P +IL++M + LT
Sbjct: 164 EAESRH--KSSGKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLT 221
Query: 241 RENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNS 289
R N+ASHLQKYR + + E + + +++ + AA+ Q+S
Sbjct: 222 RHNIASHLQKYRSHRKHMMAREAEAASWTQRRQMYAAGGPAAAVKRQDS 270
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 134 FRK 136
+R+
Sbjct: 152 WRR 154
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|166364957|ref|YP_001657230.1| OmpR family two-component response regulator [Microcystis
aeruginosa NIES-843]
gi|425465510|ref|ZP_18844819.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9809]
gi|166087330|dbj|BAG02038.1| two-component response regulator OmpR subfamily [Microcystis
aeruginosa NIES-843]
gi|389832235|emb|CCI24318.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9809]
Length = 246
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
C + ++ KK +V W+ +LH+KFVKAV Q+G D+ P +IL+LM V LTR NVASHLQKY
Sbjct: 303 CENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKY 362
Query: 252 RLY 254
R++
Sbjct: 363 RMH 365
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM- 73
P GLRVL+++ D + L+ Y V+T +ALS + + + I +V++
Sbjct: 15 PKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSIS 74
Query: 74 -PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
PD GFK LE+ DLP IM S + +MK + GA ++L KP+ +L+NIWQH
Sbjct: 75 CPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQH 130
Query: 133 VFRK 136
V K
Sbjct: 131 VVHK 134
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 134 FRK 136
+R+
Sbjct: 152 WRR 154
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 134 FRK 136
+R+
Sbjct: 151 WRR 153
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|118578876|ref|YP_900126.1| response regulator receiver protein [Pelobacter propionicus DSM
2379]
gi|118501586|gb|ABK98068.1| response regulator receiver protein [Pelobacter propionicus DSM
2379]
Length = 124
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ L K+L + YEV + G ++AL+ LR R ++VI+D+NMP+M+G
Sbjct: 7 RILVVDDEENARIALSKILTREGYEVASAGNGQEALTYLRARD--VELVITDINMPEMNG 64
Query: 79 FKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
L + + VIM++ GE ++ + GA +Y+ KP+++ EL+ I VF+K
Sbjct: 65 MAFLRELNKIRPASNVIMITAYGEVESYIEAMNLGAFEYINKPVKIDELKRIIAKVFKK 123
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|149072098|ref|YP_001293493.1| OmpR-like protein [Rhodomonas salina]
gi|134303049|gb|ABO70853.1| OmpR-like protein [Rhodomonas salina]
Length = 248
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
DT ++LVVDD+ + +ILE L Y V T +AL+LL+ K+ ++++ D
Sbjct: 3 DTLENHKEKILVVDDEASIRRILETRLSMIGYNVVTAADGEEALNLLK--KENPNLIVLD 60
Query: 71 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
+ +P +DG+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL
Sbjct: 61 IMIPKLDGYGVCQEIRKESDVPIIMLTALGDVADRITGLELGADDYVIKPFSPKELEARI 120
Query: 131 QHVFRK--KIH 139
+ V R+ ++H
Sbjct: 121 RSVLRRVERVH 131
>gi|22299907|ref|NP_683154.1| two-component response regulator [Thermosynechococcus elongatus
BP-1]
gi|22296092|dbj|BAC09916.1| two-component response regulator [Thermosynechococcus elongatus
BP-1]
Length = 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y V T +AL+ R+ + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYTVVTAADGEEALTKFRQEQP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|119486641|ref|ZP_01620691.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
gi|119456258|gb|EAW37390.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
Length = 243
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL+++ D + + + L+ Y+V+T +ALS L G+ + I +V+
Sbjct: 15 PKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIVEVSTS 74
Query: 75 -DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+ GFK LE+ DLP IM S D + +MK + GA ++L KP+ +L+NIWQHV
Sbjct: 75 CSLGGFKFLENA---KDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHV 131
Query: 134 FRKKIHEVRDI 144
K + ++
Sbjct: 132 VHKAFNSGENV 142
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
C ++ KK +V W+ +LH+KFVKAV Q+G D+ P +IL++M V LTR NVASHLQKY
Sbjct: 305 CEIKANRKKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKY 364
Query: 252 RLY 254
R++
Sbjct: 365 RIH 367
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|390442009|ref|ZP_10230030.1| putative transcriptional regulator ycf27 [Microcystis sp. T1-4]
gi|425435455|ref|ZP_18815906.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9432]
gi|425444992|ref|ZP_18825032.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9443]
gi|425450838|ref|ZP_18830661.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 7941]
gi|425456892|ref|ZP_18836598.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9807]
gi|425459379|ref|ZP_18838865.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9808]
gi|159027454|emb|CAO89419.1| ycf27 [Microcystis aeruginosa PCC 7806]
gi|389679979|emb|CCH91267.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9432]
gi|389735141|emb|CCI01327.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9443]
gi|389768144|emb|CCI06659.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 7941]
gi|389801912|emb|CCI18986.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9807]
gi|389822920|emb|CCI29278.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9808]
gi|389834672|emb|CCI34156.1| putative transcriptional regulator ycf27 [Microcystis sp. T1-4]
Length = 246
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|383453102|ref|YP_005367091.1| sigma-54 dependent DNA-binding response regulator [Corallococcus
coralloides DSM 2259]
gi|380732817|gb|AFE08819.1| sigma-54 dependent DNA-binding response regulator [Corallococcus
coralloides DSM 2259]
Length = 463
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VLVVDDD A LK+L +L + A+DAL+LL R D+V+SDV MP M G
Sbjct: 9 VLVVDDDPALLKVLGALLTQAGLTPHPASNAKDALALLARRP--IDVVLSDVRMPGMSGM 66
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LL VG D+PV++M+ G ++ ++ GA D++LKP +EL
Sbjct: 67 ELLAEVGRGWPDVPVLLMTAHGTVPLAVEAMKAGAADFVLKPFDREEL 114
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL+++ D + + + L+ Y V+T +ALS L +G+ + I +V+
Sbjct: 15 PKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVSTS 74
Query: 75 -DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+ GFK LE+ DLP IM S D + +MK + GA ++L KP+ +L+NIWQHV
Sbjct: 75 CSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHV 131
Query: 134 FRKKIHEVRDI--ENI----EGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRH 187
K + ++ E++ E ES+ ++ S P + L + D + H
Sbjct: 132 VHKAFNAGANVLSESLKPVKESVESMLQLQTESAVCDKYPAPSTPQLKQGTRLLDDGDCH 191
Query: 188 DDRDCGDASSTKKARV 203
D +C ST+K V
Sbjct: 192 DQTNC----STEKESV 203
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKY 251
C ++ KK +V W+ +LH+KFVKAV Q+G D+ P +IL++M V LTR NVASHLQKY
Sbjct: 280 CEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKY 339
Query: 252 RLY 254
R++
Sbjct: 340 RIH 342
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220906550|ref|YP_002481861.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7425]
gi|219863161|gb|ACL43500.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7425]
Length = 243
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y V T +AL RE + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYNVVTAADGEEALETFRE--EVPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYD-------------- 65
VL VDD + K++E +LK SY+VTT AL LL R +G +
Sbjct: 12 VLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSSSS 71
Query: 66 -----------IVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQH 111
++I+D MP M G+ LL+ V D+PV++MS + +R+ + +Q
Sbjct: 72 SSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQD 131
Query: 112 GACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTG 171
GA ++ LKP++ +++ + H+ ++K ++ + ES Q V P
Sbjct: 132 GAEEFFLKPVKPADMKKLKSHLLKRKQPNQKNKPQAQAVESPEQQLDPHPQPVHEPEEAA 191
Query: 172 EDLTSVRKRKDA 183
D V KRK A
Sbjct: 192 ADRNGVNKRKAA 203
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|406917000|gb|EKD55886.1| response regulator receiver protein [uncultured bacterium]
Length = 271
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LV+DDD + L++L K LK + V DA+ ++ K +D+VI+D+ MPD+DG
Sbjct: 10 ILVIDDDESILRLLTKFLKSEGHGVAAEINGSDAIETFKKEK--FDLVITDMYMPDLDGL 67
Query: 80 KLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
++ ++ + ++P+I+++ G + V+ ++ GA +Y+ KP+ + E+R I Q F
Sbjct: 68 DIIRNIKDINQNIPIIVLTAAGSITNVVHSLKLGAFNYMTKPVNINEVREIIQKAF 123
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L +DD+ ++LE L++ Y+ R+AL +LRE G D+V+SD++MP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LL+ + E + +PVI+++ GE S + ++ GA DY+L+P ++ L
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETL 112
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L +DD+ ++LE L++ Y+ R+AL +LRE G D+V+SD++MP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LL+ + E + +PVI+++ GE S + ++ GA DY+L+P ++ L
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETL 112
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 134 FRK 136
+R+
Sbjct: 163 WRR 165
>gi|308272553|emb|CBX29157.1| Acetoacetate metabolism regulatory protein atoC [uncultured
Desulfobacterium sp.]
Length = 445
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 13/131 (9%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD--GYDIVISDVNMPDM 76
R+LV+DDDL ++L++ L + Y+V C A++AL KD Y+++ISD+ MP+
Sbjct: 8 RILVIDDDLVACEVLQETLIRAQYDVDICTSAKEALG-----KDLSSYNLLISDIRMPEA 62
Query: 77 DGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
DG LL V + +LPVIM++ G M+ ++ GA DY+ KP + +R +
Sbjct: 63 DGLNLLHQVQKQWPELPVIMVTAYGSLETTMESLRLGASDYISKPFSPEAIR-----LKV 117
Query: 136 KKIHEVRDIEN 146
KK+ +V+D++
Sbjct: 118 KKLLDVKDLQQ 128
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
KK R+ WS +LH +F+ A+ Q+G PK IL LMNV LTRENVASHLQKYR+ L R
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 1329
>gi|170722859|ref|YP_001750547.1| Fis family two component sigma-54 specific transcriptional
regulator [Pseudomonas putida W619]
gi|169760862|gb|ACA74178.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pseudomonas putida W619]
Length = 458
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
++VL+V+DD A + L L+ + G A +AL ++ +D Y +VISDVNMP MD
Sbjct: 3 IKVLLVEDDRALRQALGDTLEIGGFAYRAVGSAEEALEAVQ--RDAYSLVISDVNMPGMD 60
Query: 78 GFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
G +LL H+ + LPV++M+ R ++ ++ GA DYL+KP K L ++ +
Sbjct: 61 GHQLLAHLRRQHPQLPVLLMTAHAAVERAVEAMRQGAVDYLVKPFEPKALLSLVER 116
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PV+MMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|307149957|ref|YP_003885341.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7822]
gi|306980185|gb|ADN12066.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7822]
Length = 242
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R+ D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRQTNP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|409993465|ref|ZP_11276605.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
gi|291569758|dbj|BAI92030.1| two-component response regulator [Arthrospira platensis NIES-39]
gi|409935677|gb|EKN77201.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
Length = 243
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRLTEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|218887422|ref|YP_002436743.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758376|gb|ACL09275.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 151
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
A +R+L+VDD+ ++++++K L + Y V T G +AL L R YD + D+ M D
Sbjct: 28 APIRLLLVDDEAGFIRVMQKRLSRRGYVVDTAGSGAEALRTL--RGAAYDAAVFDLKMDD 85
Query: 76 MDGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
MDGF+LL V + ++ VIM++ G +G++ GA YLLKP M+EL
Sbjct: 86 MDGFELLRVVRRMAPEMAVIMLTGHGGAEEAREGMRLGAAGYLLKPCEMEEL 137
>gi|218782909|ref|YP_002434227.1| response regulator receiver protein [Desulfatibacillum alkenivorans
AK-01]
gi|218764293|gb|ACL06759.1| Protein with response regulator receiver domain [Desulfatibacillum
alkenivorans AK-01]
Length = 444
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ L+ + K+L K YEV A++AL + +R Y ++ISD+ MP+M+G
Sbjct: 6 RILVVDDEPGILQNVTKILSKAEYEVFQASSAKEALEEMAKR--SYSLLISDIVMPEMNG 63
Query: 79 FKLLEHVGLEMDLP-VIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+LL+ V + L V+MM+ T +K ++ GA DYL KP ELR +
Sbjct: 64 LELLKMVKNQWPLTQVLMMTAYASTETAVKAIRLGALDYLPKPFTPDELRALVDRSVAGD 123
Query: 138 IHE--VRDIENIEGFESIHM 155
++E V D+E E +++H+
Sbjct: 124 LYEASVGDVER-EDIDAMHL 142
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD++A + K+LKK Y V +AL + K Y ++I D+ MP + G
Sbjct: 327 ILVVDDEVAVNNNIRKILKKGQYTVDQATTRDEALE--KVSKGFYRVIILDLKMPGVVGL 384
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
+LLE V ++ + +++++ ++ + GA Y+ KP E+R + R
Sbjct: 385 ELLEAVHKMQPNAKIVIITGYASIETAVETSRLGAMLYVPKPFTPAEIRTAVEKASR 441
>gi|258404235|ref|YP_003196977.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257796462|gb|ACV67399.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L++DD+ LK+L L K YEV T R L+ L+E G+D++I+D+ +PD+ G
Sbjct: 6 RILLIDDEPNTLKVLSAFLTKEGYEVGTAKDGRSGLNHLQE--GGWDMLITDLKLPDITG 63
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+LE V LPV+M++ G S ++ ++ GA +YL KP+ EL + Q+VF +
Sbjct: 64 LDILEQVKATWPKLPVVMITAYGSISNAVQAMKLGAFNYLTKPVDPDELLLLVQNVFER 122
>gi|407773846|ref|ZP_11121146.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
gi|407283292|gb|EKF08833.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
Length = 456
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P +R+L+VDD+ ++++ L L+ +VT DA +RE K +DI++ D+ +P
Sbjct: 2 PRQIRILIVDDEESFVRSLSFALRTEGMDVTGVHSGEDAFLQVRENK--FDIILLDLRLP 59
Query: 75 DMDGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+G ++L+ + L++D+PVIM+S G+T +K V+ GA DYL KP + EL
Sbjct: 60 GANGMEVLDSIRKLDIDVPVIMISAHGDTRAAVKAVKLGAADYLSKPFELDEL 112
>gi|86609993|ref|YP_478755.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558535|gb|ABD03492.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 246
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L Y+V T +AL + K D+V+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTASDGEEALEVFH--KQDPDLVVLDVMMPKLDG 65
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|262197622|ref|YP_003268831.1| response regulator receiver modulated metal dependent
phosphohydrolase [Haliangium ochraceum DSM 14365]
gi|262080969|gb|ACY16938.1| response regulator receiver modulated metal dependent
phosphohydrolase [Haliangium ochraceum DSM 14365]
Length = 526
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ IL + L Y V + AL+ LR R YD+VISD+ MP + G
Sbjct: 20 RILVVDDEQVIRDILSEFLSMEGYVVRSVDCGERALTELRLRP--YDMVISDLKMPGISG 77
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+LLE++G E +D+ ++M+ G + ++ GA DY+LKP +++E+ HV R+
Sbjct: 78 LELLENIGTENIDVLTVIMTGFGTVETAITAMKKGAYDYILKPFKVEEV----MHVVRRG 133
Query: 138 IHEVR-DIENIEGFESI 153
+ R ENI ES+
Sbjct: 134 LERQRLQAENIRLRESL 150
>gi|378787395|gb|AFC40026.1| hypothetical protein [Porphyra umbilicalis]
Length = 243
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL + R K+ +V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ GE + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>gi|407699472|ref|YP_006824259.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
gi|407248619|gb|AFT77804.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
Length = 446
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE-RKDGYDIVISDVNMPDMDG 78
+L+VDDD + L++L L+ Y VT D S LR+ + D YD+V+SD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYHVTAV---EDGQSALRKLQNDNYDVVLSDLRMPGLDG 67
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + G+ D+PVI+M+ G + + Q G +L KP+ ELR + Q
Sbjct: 68 LSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQKAL 124
>gi|218441116|ref|YP_002379445.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7424]
gi|218173844|gb|ACK72577.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7424]
Length = 247
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R+ D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRQTSP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI---- 66
D + + VLVVDD + K++EK+LK SY VT R AL L D D+
Sbjct: 8 DAASTSEFHVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDN 67
Query: 67 -----VISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
+I+D MP M G+ LL V D+PV++MS + SR+ + + GA ++LL
Sbjct: 68 IQVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLL 127
Query: 119 KPIRMKELRNIWQHVFRK 136
KP+++ +++ + H+ K
Sbjct: 128 KPVQLSDVKKLRSHILNK 145
>gi|226310343|ref|YP_002770237.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226093291|dbj|BAH41733.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1067
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L +DDD L++L++ML Y++TTC RDAL LL + +D++I DV MP M G+
Sbjct: 732 ILAIDDDPVNLRVLDRMLSSSHYQITTCASPRDALDLLFTEQ--WDLLIIDVMMPHMSGY 789
Query: 80 KLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIW 130
+L + V +LP+++++ ++ V G GA DY+ KP+ EL+ +W
Sbjct: 790 ELTQRVREHFSVSELPILLLTARSQSEDVYTGYLSGANDYVCKPVDGMELKYRVW 844
>gi|428209322|ref|YP_007093675.1| winged helix family two component transcriptional regulator
[Chroococcidiopsis thermalis PCC 7203]
gi|428011243|gb|AFY89806.1| two component transcriptional regulator, winged helix family
[Chroococcidiopsis thermalis PCC 7203]
Length = 242
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFR--KADPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|297569043|ref|YP_003690387.1| Fis family transcriptional regulator [Desulfurivibrio alkaliphilus
AHT2]
gi|296924958|gb|ADH85768.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfurivibrio alkaliphilus AHT2]
Length = 461
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ +L IL ++L+ YE T G A + L + R D++I+D+ MP MDG
Sbjct: 4 ILVVDDEPNYLVILSELLRDEGYETFTAGSAEEGLEI--ARHTDLDLIITDMRMPGMDGL 61
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LL+ + G+ LPVIM++ GE + + ++ GA +YL KP EL
Sbjct: 62 ELLKTIKGINPSLPVIMITAFGEVDKAVAAMRAGAFNYLTKPFDNDEL 109
>gi|11465824|ref|NP_053968.1| Ycf27 [Porphyra purpurea]
gi|1723330|sp|P51358.1|YCF27_PORPU RecName: Full=Probable transcriptional regulator ycf27; AltName:
Full=OmpR-like protein
gi|1276824|gb|AAC08244.1| hypothetical chloroplast ORF 27 (chloroplast) [Porphyra purpurea]
Length = 243
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL + R K+ +V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ GE + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>gi|409397904|ref|ZP_11248762.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas sp. Chol1]
gi|409117643|gb|EKM94070.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas sp. Chol1]
Length = 458
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+V+DD A + L L+ Y A AL LRE + + +V+SDVNMP MDG
Sbjct: 4 RILLVEDDHALREALGDTLEVGGYAYRAVASAEAALQALRE--EAFSLVVSDVNMPGMDG 61
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN-IWQHV 133
+LL + +PV++M+ G R ++ ++ GA DYLLKP K L N I QH
Sbjct: 62 HELLSVIRQRYPQVPVLLMTAFGAIERAVQAMRQGAVDYLLKPFEPKALLNLIAQHA 118
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
+ VLV +DD L +L C Y+VT R A L + DIV+ D+ MP+M
Sbjct: 8 SIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKADSNIDIVLLDLYMPEM 67
Query: 77 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 132
DG +LL EH L+ +PVIMMS D E RV + +GA DYL+KP+R++ ++ + ++
Sbjct: 68 DGIELLLLMQEHEHLK-RIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRIQNVKGLAKY 126
Query: 133 V 133
V
Sbjct: 127 V 127
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 134 FRK 136
+R+
Sbjct: 156 WRR 158
>gi|417926155|ref|ZP_12569564.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341590005|gb|EGS33256.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
Length = 220
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
G +LVVDDD ++E LK+ + V TC A++ LSL D +D++I DV MPDM
Sbjct: 2 GQNILVVDDDEQTRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 77 DGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
DGF+L +V ++D P++ ++ + V +G+ G DY+ KP EL
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLALGGDDYIRKPFTPLEL 108
>gi|226315460|ref|YP_002775356.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098410|dbj|BAH46852.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1024
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R++VVDDD L IL KML+ YEV+T A+ ALS+L ++ D+VISDV MP + G
Sbjct: 698 RIIVVDDDSINLNILSKMLESDQYEVSTATSAQQALSIL--ERNPVDLVISDVMMPHVSG 755
Query: 79 FKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
++L + ++LPV++++ + ++ G Q GA DY+ KP+ EL+
Sbjct: 756 YELTRIIRERFSVLELPVLLLTARSRSEDIIAGFQAGANDYVKKPVDAWELK 807
>gi|330836364|ref|YP_004411005.1| winged helix family two component transcriptional regulator
[Sphaerochaeta coccoides DSM 17374]
gi|329748267|gb|AEC01623.1| two component transcriptional regulator, winged helix family
[Sphaerochaeta coccoides DSM 17374]
Length = 224
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDDD +++ +L+K + V +ALS L K D+ I D+ MP+MDG
Sbjct: 3 KILVVDDDPHLRELVRIILQKEGFAVYEAADGLEALSKLETSKA--DLAIIDLMMPNMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI-------RMKELRNIWQ 131
F+L + + D+PV+M++ GET++ +KG Q GA DYL+KP R+K L +Q
Sbjct: 61 FELCQELRASYDIPVLMLTAKGETAQKIKGFQAGADDYLVKPFEPLELMARVKALLKRYQ 120
Query: 132 HVFRKKIHEVRDIENIEGFESI 153
+ + + + + N + +E I
Sbjct: 121 IIASQNVQIGKLMMNRKNYEVI 142
>gi|126740923|ref|ZP_01756607.1| C4-dicarboxylate transport transcriptional regulatory protein DctD
[Roseobacter sp. SK209-2-6]
gi|126718023|gb|EBA14741.1| C4-dicarboxylate transport transcriptional regulatory protein DctD
[Roseobacter sp. SK209-2-6]
Length = 446
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LV DDD A L ++L+ ++ T DAL LL+ER +D+++SDV MP M G
Sbjct: 9 ILVADDDKAMRHSLAELLEVAGWQCETVARGADALKLLQERP--FDVLLSDVQMPGMSGL 66
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+LL H+ L D P++++S G+ ++ +Q GA ++ KP + L +I H
Sbjct: 67 ELLSHLNLAKDPPLVLISAHGDIPMAVQAMQDGAYSFVEKPYEPRRLLSILAHA 120
>gi|428212246|ref|YP_007085390.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
gi|428000627|gb|AFY81470.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
Length = 242
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--TENPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 134 FRK 136
+R+
Sbjct: 151 WRR 153
>gi|428225836|ref|YP_007109933.1| winged helix family two component transcriptional regulator
[Geitlerinema sp. PCC 7407]
gi|427985737|gb|AFY66881.1| two component transcriptional regulator, winged helix family
[Geitlerinema sp. PCC 7407]
Length = 243
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--NTAPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|417924814|ref|ZP_12568241.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|417924910|ref|ZP_12568337.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341592111|gb|EGS34997.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
gi|341592207|gb|EGS35093.1| subtilin biosynthesis regulatory protein SpaR [Finegoldia magna
SY403409CC001050417]
Length = 220
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
G +LVVDDD ++E LK+ + V TC A++ LSL D +D++I DV MPDM
Sbjct: 2 GQNILVVDDDEQIRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 77 DGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
DGF+L +V ++D P++ ++ + V +G+ G DY+ KP EL
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLALGGDDYIRKPFTPLEL 108
>gi|333893877|ref|YP_004467752.1| two-component system response regulator [Alteromonas sp. SN2]
gi|332993895|gb|AEF03950.1| two-component system response regulator [Alteromonas sp. SN2]
Length = 446
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+VDDD + L++L L+ Y+VT AL L+ D +D+V+SD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYQVTAVEDGNAALRKLQ--NDAFDVVLSDLRMPGLDGL 68
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + G+ D+PVI+M+ G S + Q G +L KP+ ELR + Q
Sbjct: 69 SLFEEIMGIRKDIPVILMTAHGTISDAVAATQRGVFGFLPKPVDHDELRTLLQKAL 124
>gi|81300262|ref|YP_400470.1| two component transcriptional regulator [Synechococcus elongatus
PCC 7942]
gi|81169143|gb|ABB57483.1| two component transcriptional regulator, winged helix family
[Synechococcus elongatus PCC 7942]
Length = 244
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLAMIGYEVVTAADGEEALITFRNATP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|317130175|ref|YP_004096457.1| winged helix family two component transcriptional regulator
[Bacillus cellulosilyticus DSM 2522]
gi|315475123|gb|ADU31726.1| two component transcriptional regulator, winged helix family
[Bacillus cellulosilyticus DSM 2522]
Length = 230
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+VDD+ K+L+ +++ +A L+ +++ YD++I D+ MP++DG
Sbjct: 4 KILLVDDEQEMRKLLKVCFSASPFQLDEASNGDEAF--LKVQENNYDLIILDIMMPEIDG 61
Query: 79 FKLLEHVGLEMD--LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
F+LL + +E+D +PVI+++ G+T RV++G++ GA DY++KP KEL + V R+
Sbjct: 62 FELLNMLRVELDTEIPVILLTALGDTERVVEGLKRGADDYVVKPFEPKELVARVESVLRR 121
>gi|303234315|ref|ZP_07320955.1| putative subtilin biosynthesis regulatory protein SpaR [Finegoldia
magna BVS033A4]
gi|302494568|gb|EFL54334.1| putative subtilin biosynthesis regulatory protein SpaR [Finegoldia
magna BVS033A4]
Length = 220
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
G +LVVDDD ++E LK+ + V TC A++ LSL D +D++I DV MPDM
Sbjct: 2 GQNILVVDDDEQIRSVIETSLKRAQFSVYTCASAKETLSL---SLDQFDLMIFDVMMPDM 58
Query: 77 DGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
DGF+L +V ++D P++ ++ + V +G+ G DY+ KP EL
Sbjct: 59 DGFELCRNVREKVDCPILFLTAKSTEADVAEGLAIGGDDYIRKPFTPLEL 108
>gi|410861006|ref|YP_006976240.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
gi|410818268|gb|AFV84885.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
Length = 446
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE-RKDGYDIVISDVNMPDMDG 78
+L+VDDD + L++L L+ Y+VT D S LR+ + D +D+V+SD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYDVTAV---EDGQSALRKLQNDSFDVVLSDLRMPGLDG 67
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + G+ D+PVI+M+ G + + Q G +L KP+ ELR + Q
Sbjct: 68 LSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLLQKAL 124
>gi|428779964|ref|YP_007171750.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
gi|428694243|gb|AFZ50393.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
Length = 244
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +A++ E + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEAITTFNE--NNPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRV- 123
Query: 139 HEVRDIENIEGFESIHMTRSGS 160
D E + G S + + GS
Sbjct: 124 ----DKEGLSGIPSSGVIQIGS 141
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
+ + R+VW+ +LH++F+ AVN +G D PK I+ +MNV LTRENVASHLQKYRL
Sbjct: 504 SNRNRLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYRLKQMT 563
Query: 258 LQKDELKTSVGGIKQKDS 275
++ + +K+ +S
Sbjct: 564 AEEKAAMNAKSAMKKNES 581
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+L+ + L+ +L+K Y+V T + AL R K +D+VI+D+ MP M G
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE--RAEKTAFDLVITDIRMPGMSGL 63
Query: 80 KLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
LL + L+ D+ VIM++ + ++ GA DY+ KP + E++ + + V +K+
Sbjct: 64 DLLARLKQLQADIGVIMITAFASPDDAVTAMKSGAFDYITKPFNVDEIKTVIRAVLKKR 122
>gi|182678495|ref|YP_001832641.1| nitrogen metabolism transcriptional regulator NtrC [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182634378|gb|ACB95152.1| nitrogen metabolism transcriptional regulator, NtrC, Fis Family
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 493
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-YDIVISDVNMP 74
AG +LV DDD A +L + L + YEV G A +L R + G D+VI+DV MP
Sbjct: 2 AGGNILVADDDTAIRTVLSQALSRAGYEVRATG---TAATLWRWVQSGDGDLVITDVVMP 58
Query: 75 DMDGFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
D + F+LL + L DLP+I+MS +K + GA DYL KP ++EL +I
Sbjct: 59 DENAFELLPKMKKLRPDLPIIVMSAQNTFMTAIKASERGAYDYLPKPFDLRELVSIVGRA 118
Query: 134 F---RKKIHEVRDIENIEGF 150
+ ++HE + E++EG
Sbjct: 119 MSGPKNRVHEEKP-EDLEGM 137
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 134 FRK 136
+R+
Sbjct: 152 WRR 154
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 134 FRK 136
+R+
Sbjct: 151 WRR 153
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSY-EVTTCGLARDALSLLRERKDG---YDIVISDV 71
AGLRVL VD+D L +L+++LK C Y VT AL +LRERKDG +D+VISD
Sbjct: 8 AGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFDLVISDF 67
Query: 72 NMPD--MDGFKLLEHVGLEMDLPVIMMSV 98
+P+ ++G K LE V +EMD+PVI +S+
Sbjct: 68 FIPNNGINGLKFLELVAVEMDIPVIGISL 96
>gi|428307458|ref|YP_007144283.1| winged helix family two component transcriptional regulator
[Crinalium epipsammum PCC 9333]
gi|428248993|gb|AFZ14773.1| two component transcriptional regulator, winged helix family
[Crinalium epipsammum PCC 9333]
Length = 241
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|427725815|ref|YP_007073092.1| winged helix family two component transcriptional regulator
[Leptolyngbya sp. PCC 7376]
gi|427357535|gb|AFY40258.1| two component transcriptional regulator, winged helix family
[Leptolyngbya sp. PCC 7376]
Length = 242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + +ILE L YEV T +AL + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYEVVTAADGEEALGTFTDADP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|318040122|ref|ZP_07972078.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L++L+ DD+ +ILE L ++V +AL L R + D+V+ DV MP++D
Sbjct: 9 LKILIADDEANIRRILETRLAMQGHQVAAAQDGTEALELFRSVEP--DVVVLDVMMPELD 66
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
GF +LE + + ++PVIM++ G+ + + G++ GA DY++KP KEL Q V R+
Sbjct: 67 GFAVLERIRAQSEVPVIMLTALGDVADRITGLELGADDYMVKPFSPKELEARIQCVMRR 125
>gi|11467627|ref|NP_050679.1| Ycf27 [Guillardia theta]
gi|6136611|sp|O78428.1|YCF27_GUITH RecName: Full=Probable transcriptional regulator ycf27; AltName:
Full=OmpR-like protein
gi|3602952|gb|AAC35613.1| ompR homolog (chloroplast) [Guillardia theta]
Length = 254
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+VL+VDD+ + KILE L Y V T +AL+L + + D+VI D+ MP +DG
Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQ--EMPDVVILDIMMPKLDG 73
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+ + + + + D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 74 YGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRRT- 132
Query: 139 HEVRDIENIEGFESIHMTRSG 159
N F S H+T SG
Sbjct: 133 -------NKAAFSS-HLTTSG 145
>gi|434391939|ref|YP_007126886.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
gi|428263780|gb|AFZ29726.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
Length = 242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFR--KAQPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 16/183 (8%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+ +D L +L+ C+Y+V C A L + ++ +D+++ D+ +P+M
Sbjct: 14 INVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEMT 73
Query: 78 GFKLLEHVGL---EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G +LL+ + D+PVIMMS D ET V + GA DY++KP+ K+L+ + Q
Sbjct: 74 GLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGL-QTFV 132
Query: 135 RKKIHEVRDIENIEGFE------------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
+KK + + +N +G+ S+ + R +DQ + + + ++RK+
Sbjct: 133 KKKPKQRNNNQNEKGYYTIVRNIGKGASGSVELVRKSTDQELYAMKVIPTFFMNEQERKN 192
Query: 183 AEN 185
AEN
Sbjct: 193 AEN 195
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VL+VDD++ ++L MLK+ YEVTT AL +L K +V++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLH--KTPVHVVVTDLVMPKVGGM 61
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
+LL VG + D+PVIM++ G + ++ GA DY+ KP EL+ + R
Sbjct: 62 ELLRRVGADFPDVPVIMITAHGSVDSAVGALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL++D D + ++ L++ Y V T DALS + + + + + I +V
Sbjct: 15 PKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTTS 74
Query: 75 DMDG-FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+ +G FK LE DLP IM+S S +MK + GA ++L KP+ +LRNIWQHV
Sbjct: 75 NHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQHV 131
Query: 134 FRK 136
K
Sbjct: 132 VHK 134
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL-QK 250
CG S KK +V W+ +LH+KFV+AV Q+G ++ P +IL+LM V LTR NVASHL QK
Sbjct: 306 CGTKISRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQK 365
Query: 251 YRLY 254
YR++
Sbjct: 366 YRMH 369
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GLRVL++D D + ++ L++ Y V T DALS + + + + + I +V
Sbjct: 15 PKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTTS 74
Query: 75 DMDG-FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
+ +G FK LE DLP IM+S S +MK + GA ++L KP+ +LRNIWQHV
Sbjct: 75 NHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQHV 131
Query: 134 FRK 136
K
Sbjct: 132 VHK 134
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 192 CGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL-QK 250
CG S KK +V W+ +LH+KFV+AV Q+G ++ P +IL+LM V LTR NVASHL QK
Sbjct: 306 CGTKISRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQK 365
Query: 251 YRLY 254
YR++
Sbjct: 366 YRMH 369
>gi|339442514|ref|YP_004708519.1| response regulator [Clostridium sp. SY8519]
gi|338901915|dbj|BAK47417.1| response regulator [Clostridium sp. SY8519]
Length = 223
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LV DD+ A + + + YEV +A+ + RE+ YD++I D+ MP +DG
Sbjct: 3 RLLVADDEAAIRLGIREYAEFEGYEVDEACDGSEAVQMCREKD--YDLLILDIMMPKIDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
F + + D+PVIM+S GE + G + G DY++KP +KEL + V R+
Sbjct: 61 FAACKKIRSMKDIPVIMLSAKGEEYDKLYGFELGVEDYVVKPFSLKELMARVEVVLRRYR 120
Query: 139 HEVRDIENIEGFESIHMTRSGSDQSVDG 166
+NI FE + + +G ++DG
Sbjct: 121 KAAETEKNILSFEGLELNITGRSVTIDG 148
>gi|333907190|ref|YP_004480776.1| two component, sigma54 specific, Fis family transcriptional
regulator [Marinomonas posidonica IVIA-Po-181]
gi|333477196|gb|AEF53857.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas posidonica IVIA-Po-181]
Length = 449
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++L+V+DD + LE L SY+ A +A+ L+ + +D+V+SDVN+P MD
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKMVYSAEEAVIALKHGQ--FDMVVSDVNLPGMD 61
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
G+ LL HV +LP+++M+ G+ + ++ ++ GA DYLLKP + +EL N
Sbjct: 62 GYGLLHHVVDAYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|134276940|ref|YP_537039.2| Ycf27 [Pyropia yezoensis]
gi|125991250|sp|Q1XDC9.2|YCF27_PORYE RecName: Full=Probable transcriptional regulator ycf27; AltName:
Full=OmpR-like protein
Length = 243
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +AL + R K+ +V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFR--KEYPSLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ GE + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>gi|254414140|ref|ZP_05027907.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178815|gb|EDX73812.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 245
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 10 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRTSEP--DLVVLDVMMPKLDG 67
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 68 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 125
>gi|172038915|ref|YP_001805416.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|354552794|ref|ZP_08972102.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
gi|171700369|gb|ACB53350.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|353556116|gb|EHC25504.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
Length = 243
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHEAVP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|427418250|ref|ZP_18908433.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425760963|gb|EKV01816.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 263
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 10 NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
+T ++LVVDD+ + +ILE L Y+V T +AL R + D+V+
Sbjct: 19 QETLESVKEKILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFRH--EIPDLVVL 76
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
DV MP +DG+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL
Sbjct: 77 DVMMPKLDGYGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEAR 136
Query: 130 WQHVFRK 136
+ V R+
Sbjct: 137 IRSVLRR 143
>gi|451946632|ref|YP_007467227.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
gi|451905980|gb|AGF77574.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
Length = 757
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VL+VDDD A +K+ E+MLK Y+V+ +AL+ R + +D++I+D+ MP + G
Sbjct: 633 VLIVDDDEAIVKMEEQMLKSFGYQVSAFNRCEEALNEFRSHPNAFDLIITDMTMPGITGL 692
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+L V L D+PVI+ + E K G C YL+KP+ K+L + V KK
Sbjct: 693 QLTREVLALRSDMPVILCTGFSELINEKKAKDAGICQYLMKPLLKKDLAIAVREVLDKK 751
>gi|126658619|ref|ZP_01729765.1| two-component response regulator [Cyanothece sp. CCY0110]
gi|126620056|gb|EAZ90779.1| two-component response regulator [Cyanothece sp. CCY0110]
Length = 243
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHEAIP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VLV +DD L +L C+Y+VT R A L + D+V+ D+ MP+MD
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSNIDVVLLDLWMPEMD 70
Query: 78 GFKLL---EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G++LL ++ ++PVIMMS D E +V + HGA DYL+KPIR++ ++ I HV
Sbjct: 71 GWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHVI 130
>gi|425900913|ref|ZP_18877504.1| DNA-binding response regulator [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883901|gb|EJL00388.1| DNA-binding response regulator [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 240
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L ++DDL + + L +C ++VT C ++ L++ R++ +D+V+ D+ +P MDG
Sbjct: 10 RILSIEDDLVLGAYVHEQLGRCGFDVTWCQNGQEGLTMARQQP--FDVVLMDILLPGMDG 67
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+L H PV++MS G + + G + GA DYL KP M ELR + + R+
Sbjct: 68 LTVLTHFRQSHSTPVLLMSALGAEADRISGFRLGADDYLPKPFSMAELRVRIEAILRR 125
>gi|334116724|ref|ZP_08490816.1| two component transcriptional regulator, winged helix family
[Microcoleus vaginatus FGP-2]
gi|428316884|ref|YP_007114766.1| two component transcriptional regulator, winged helix family
[Oscillatoria nigro-viridis PCC 7112]
gi|333461544|gb|EGK90149.1| two component transcriptional regulator, winged helix family
[Microcoleus vaginatus FGP-2]
gi|428240564|gb|AFZ06350.1| two component transcriptional regulator, winged helix family
[Oscillatoria nigro-viridis PCC 7112]
Length = 247
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRNTEP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|443476767|ref|ZP_21066656.1| two component transcriptional regulator, winged helix family
[Pseudanabaena biceps PCC 7429]
gi|443018233|gb|ELS32521.1| two component transcriptional regulator, winged helix family
[Pseudanabaena biceps PCC 7429]
Length = 245
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +A+ + + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIQVFH--TENPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|427713333|ref|YP_007061957.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 6312]
gi|427377462|gb|AFY61414.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechococcus sp. PCC 6312]
Length = 251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R+ + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYQVVTAADGEEALVTFRD--EFPDLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|302337934|ref|YP_003803140.1| nitrogen specific signal transduction histidine kinase NtrB
[Spirochaeta smaragdinae DSM 11293]
gi|301635119|gb|ADK80546.1| signal transduction histidine kinase, nitrogen specific, NtrB
[Spirochaeta smaragdinae DSM 11293]
Length = 900
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VL VDD+ L ML C YEVTT ++A+ LLR+ D YDI + D+ MP+ G
Sbjct: 775 VLFVDDEEMLLSNGSAMLHACGYEVTTASSGKNAMELLRKAPDRYDIAVVDIIMPEFSGL 834
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+ L+ + E+ LPVI+ S + ++ +G++ GA +L KP ++ L ++ + ++
Sbjct: 835 ECLKAIQKEVPSLPVILTSGNSGDEQISEGIEAGAAAFLPKPYSIETLSSLIADTLKPRL 894
>gi|300024142|ref|YP_003756753.1| Fis family two component sigma-54 specific transcriptional
regulator [Hyphomicrobium denitrificans ATCC 51888]
gi|299525963|gb|ADJ24432.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Hyphomicrobium denitrificans ATCC 51888]
Length = 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLR-ERKDGYDIVISDVNMPDMD 77
RVL+VDDD A +ILE+ +K+ +E TCG AL +L + +D +VI D+ MP +D
Sbjct: 4 RVLIVDDDPAQRRILEETVKRFGFETKTCGSGEQALQILESQERDPIALVILDLVMPGVD 63
Query: 78 GFKLLEHVGLEMDL-PVIMMSVDGETSRVMKGVQHGACDYLLKP 120
G +LE VG + P+I+ + G + ++ GA D+++KP
Sbjct: 64 GMAVLERVGHAQGMPPIIVQTAHGSIETAINAMRRGAVDFVVKP 107
>gi|302390526|ref|YP_003826347.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
gi|302201154|gb|ADL08724.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
Length = 229
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
+G R+LVVDD+ L +++ L+K + VT +AL LL +RK +D+V+ D+ MP+
Sbjct: 2 SGYRILVVDDEDKLLDLIKNFLEKEGFAVTCADSGVEALKLLEKRK--FDLVVLDIMMPE 59
Query: 76 MDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 135
+ GF +L + ++ +PVI ++ E + G++ G DY+ KP ++EL + V R
Sbjct: 60 VSGFDVLRRIREKIQIPVIFLTARAEEPDKLLGLELGGDDYITKPFSLRELAARIRAVLR 119
Query: 136 K 136
+
Sbjct: 120 R 120
>gi|363898544|ref|ZP_09325067.1| hypothetical protein HMPREF9625_00084 [Oribacterium sp. ACB1]
gi|395208096|ref|ZP_10397433.1| response regulator receiver domain protein [Oribacterium sp. ACB8]
gi|361961011|gb|EHL14241.1| hypothetical protein HMPREF9625_00084 [Oribacterium sp. ACB1]
gi|394706304|gb|EJF13823.1| response regulator receiver domain protein [Oribacterium sp. ACB8]
Length = 244
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD + +++ L+K + T +ALSL K+G D++I D+ +P +DG
Sbjct: 6 RILIVDDDSSIAELISLYLEKECFSTTIAEDGEEALSLYE--KEGADLLILDLMLPGIDG 63
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+++ + D+P+IM+S GET + G++ GA DY+LKP KEL + V R+
Sbjct: 64 YEVCRRIRASSDVPIIMLSAKGETFDKVLGLELGADDYILKPFDTKELVARVKAVLRR 121
>gi|56965768|ref|YP_177502.1| two-component response regulator [Bacillus clausii KSM-K16]
gi|56912014|dbj|BAD66541.1| two-component response regulator [Bacillus clausii KSM-K16]
Length = 226
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VLVVDD+ L+++ L+K SY T DAL R +D D+VI DV M MDGF
Sbjct: 6 VLVVDDEPELLELVVTYLRKESYRALTADNGADALK--RIEQDAVDLVILDVMMEGMDGF 63
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIH 139
+ E + + LPVIM++ G + ++G++ GA DY++KP KEL + R+
Sbjct: 64 HVCERIRQKHSLPVIMLTARGNEADKVRGLKTGADDYMVKPFSPKELMARVEAALRRA-- 121
Query: 140 EVRDIENIEG----FESIHMTRSGSDQSVDGPLLT 170
+++ I G F + + + G +V G L++
Sbjct: 122 ---NMDKIRGRRLVFGELELDQDGRAVTVAGSLIS 153
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 191 DC--GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
DC D KK +V W+ +LH+KFV+AV Q+G DK P +IL++MNV LTR NVASHL
Sbjct: 118 DCLSNDNDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHL 177
Query: 249 QKYRLYLTRLQKDELKTSVGGIKQ 272
QKYR + L E + + +++
Sbjct: 178 QKYRSHRKHLLAREAEAASWNLRR 201
>gi|67921096|ref|ZP_00514615.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|416381162|ref|ZP_11684168.1| two-component response regulator [Crocosphaera watsonii WH 0003]
gi|67857213|gb|EAM52453.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|357265562|gb|EHJ14311.1| two-component response regulator [Crocosphaera watsonii WH 0003]
Length = 243
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHEAIP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|218779221|ref|YP_002430539.1| Fis family two component sigma-54 specific transcriptional
regulator [Desulfatibacillum alkenivorans AK-01]
gi|218760605|gb|ACL03071.1| Two-component, sigma54 specific, transcriptional regulator, Fis
family [Desulfatibacillum alkenivorans AK-01]
Length = 466
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+VDD+L + L ML++ YEV+T G R+AL LL +K YD+++ D+ + D+ G
Sbjct: 8 KILIVDDELGMREFLGLMLERDGYEVSTAGGGREALGLL--KKHSYDLLLCDIRLGDISG 65
Query: 79 FKLLE-HVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
++L +GL VIM+S T +K + GA DY+ KP ELR + +K
Sbjct: 66 LEVLRMAMGLNPKPVVIMISAFSSTESAVKAMNEGAFDYIPKPFDNDELRGTIANALERK 125
Query: 138 IHE 140
E
Sbjct: 126 TLE 128
>gi|330831457|ref|YP_004394409.1| two-component system response regulator [Aeromonas veronii B565]
gi|406675314|ref|ZP_11082503.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
gi|423203229|ref|ZP_17189807.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|423211893|ref|ZP_17198426.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|328806593|gb|AEB51792.1| Two-component system response regulator [Aeromonas veronii B565]
gi|404612694|gb|EKB09752.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|404613458|gb|EKB10480.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|404627646|gb|EKB24446.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
Length = 426
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD++ LK++ L+ YEV T A AL LR+++ D+V+SD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQR--ADLVLSDLRMAGMDG 60
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + + + LPVI+M+ G ++ + G +L KPI EL +H
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELFATIEHAL 117
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA ++L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD + ++ +L + Y VT A AL R + +VISDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDA--ARLTDFSLVISDVRMPGKDG 67
Query: 79 FKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL-RNIWQHVFRK 136
F LLE V L D VIM++ G+T ++ +++GA DYLLKP ++ +L R I + + R+
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 137 KIHEVR 142
++ R
Sbjct: 128 RLELAR 133
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|363898504|ref|ZP_09325027.1| hypothetical protein HMPREF9625_00044 [Oribacterium sp. ACB1]
gi|395208030|ref|ZP_10397367.1| response regulator receiver domain protein [Oribacterium sp. ACB8]
gi|361960971|gb|EHL14201.1| hypothetical protein HMPREF9625_00044 [Oribacterium sp. ACB1]
gi|394706238|gb|EJF13757.1| response regulator receiver domain protein [Oribacterium sp. ACB8]
Length = 224
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L++LVVDD+ K+L+ LK YEV T G +A+ + ++KD +VI DV MP MD
Sbjct: 4 LKILVVDDEERMRKLLQDFLKMKDYEVLTAGDGEEAIDIFFQKKD-IALVILDVMMPKMD 62
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
G+++L+ + +PVIM++ E S +KG +GA +Y+ KP K L + + R+
Sbjct: 63 GWEVLKTIREHSKVPVIMLTARSEESDELKGFDYGADEYISKPFSPKILVARVEALLRRT 122
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGP 167
+ ++ + G I M S +VDG
Sbjct: 123 GVQKEEVLEVGG---IRMDESAHSVTVDGK 149
>gi|325291379|ref|YP_004267560.1| response regulator receiver protein [Syntrophobotulus glycolicus
DSM 8271]
gi|324966780|gb|ADY57559.1| response regulator receiver protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 123
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDD + ++L ++ K C YE+ TC AL ++ E K D+++ DV MP M+G
Sbjct: 3 RILIVDDQVGIRRLLTEVFKDCGYEIETCASGVKALEIMSEFKP--DLLLMDVKMPGMNG 60
Query: 79 FKLLEHVGLEMD--LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+L+ + E D + VIMM+ G+ + + G +++KP + ELR + V R+
Sbjct: 61 IDVLKKIREENDRQIKVIMMTAYGDQEHINTAEELGVVGFIIKPFDINELREQIKDVLRE 120
Query: 137 K 137
K
Sbjct: 121 K 121
>gi|126700939|ref|YP_001089836.1| two-component response regulator [Clostridium difficile 630]
gi|254976918|ref|ZP_05273390.1| two-component response regulator [Clostridium difficile QCD-66c26]
gi|255094303|ref|ZP_05323781.1| two-component response regulator [Clostridium difficile CIP 107932]
gi|255102486|ref|ZP_05331463.1| two-component response regulator [Clostridium difficile QCD-63q42]
gi|255308391|ref|ZP_05352562.1| two-component response regulator [Clostridium difficile ATCC 43255]
gi|255316058|ref|ZP_05357641.1| two-component response regulator [Clostridium difficile QCD-76w55]
gi|255518715|ref|ZP_05386391.1| two-component response regulator [Clostridium difficile QCD-97b34]
gi|255651836|ref|ZP_05398738.1| two-component response regulator [Clostridium difficile QCD-37x79]
gi|260684864|ref|YP_003216149.1| two-component response regulator [Clostridium difficile CD196]
gi|260688522|ref|YP_003219656.1| two-component response regulator [Clostridium difficile R20291]
gi|306521624|ref|ZP_07407971.1| two-component response regulator [Clostridium difficile QCD-32g58]
gi|384362532|ref|YP_006200384.1| two-component response regulator [Clostridium difficile BI1]
gi|423090370|ref|ZP_17078674.1| subtilin biosynthesis regulatory protein SpaR [Clostridium
difficile 70-100-2010]
gi|115252376|emb|CAJ70217.1| Two-component response regulator [Clostridium difficile 630]
gi|260211027|emb|CBA66352.1| two-component response regulator [Clostridium difficile CD196]
gi|260214539|emb|CBE07065.1| two-component response regulator [Clostridium difficile R20291]
gi|357556679|gb|EHJ38264.1| subtilin biosynthesis regulatory protein SpaR [Clostridium
difficile 70-100-2010]
Length = 219
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+L LK++E +LK+ +EV A+++ + ++++I DV MP MDG
Sbjct: 3 KILVVDDELDMLKLIENVLKRDGHEVKVISDVEKAMNM---DFNYFNLIILDVMMPKMDG 59
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIWQHVFRKK 137
F++ + + ++D P++ ++ S +M G+ GA DY+ KP + ELR I H+ R
Sbjct: 60 FEVCKTIRNKVDCPILFLTAKNMESDIMYGLGIGADDYITKPFGVGELRARITAHLRR-- 117
Query: 138 IHEVRDIENIEGFESIHMTRSGSDQSVDGP 167
E R+ +N+ ++ G + S+DG
Sbjct: 118 --ESREKKNLLTISNVQFNFLGKEVSIDGK 145
>gi|347732913|ref|ZP_08865983.1| response regulator [Desulfovibrio sp. A2]
gi|347518321|gb|EGY25496.1| response regulator [Desulfovibrio sp. A2]
Length = 119
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++L+VDD+ +L ++ K L + EV T DA++ R + GYD V+ DV MP MD
Sbjct: 1 MKILIVDDETEFLDLMHKRLARRGMEVDTADNGTDAVA--RVEQGGYDAVVLDVKMPGMD 58
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
G + L + L ++PV++++ + G++ GA DY+LKP+ + EL
Sbjct: 59 GLETLRRIKALRPEVPVVLLTGHASLGAALTGMELGAFDYMLKPVAINEL 108
>gi|443315643|ref|ZP_21045123.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442784737|gb|ELR94597.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 242
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRTAHP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|443312755|ref|ZP_21042370.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
gi|442777211|gb|ELR87489.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
Length = 256
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + R K ++V+ DV MP +DG
Sbjct: 21 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFR--KAEPNLVVLDVMMPKLDG 78
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 79 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 136
>gi|434387698|ref|YP_007098309.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
gi|428018688|gb|AFY94782.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
Length = 242
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ + +ILE L Y+V T +AL RE D+V+ DV MP +DG+
Sbjct: 8 ILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRE--TCPDLVVLDVMMPKLDGY 65
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 66 GVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+ A + L++ + D+V+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA D+L KPIR EL+N+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 134 FRK 136
+R+
Sbjct: 155 WRR 157
>gi|118722731|gb|ABL10089.1| golden 2-like protein [Triticum aestivum]
Length = 461
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 182 DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR 241
+AE+RH ++ KKA+V W+ +LH++FV+AV Q+G DK P +IL++M + LTR
Sbjct: 164 EAESRHKS-SSKNSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTR 222
Query: 242 ENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNS 289
N+ASHLQKYR + + E + + +++ + AA+ Q+S
Sbjct: 223 HNIASHLQKYRSHRKHMIAREAEAASWTQRRQMYAAGGPAAAVKRQDS 270
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLL--------------RERK 61
A VL VDD L K++E++LK S++VTT AL L +++
Sbjct: 7 APFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQE 66
Query: 62 DGYDIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
G +++I+D MP M G+ LL+ + D+PV++MS D SR+ + ++ GA ++ L
Sbjct: 67 VGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFL 126
Query: 119 KPIRMKELRNIWQHVFRKKIHE 140
KP+R+ ++ + H+ + + E
Sbjct: 127 KPVRLSDMSKLKPHILKSRCKE 148
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDI---- 66
D + + VL VDD + K++EK+LK SY VTT R AL L D D+
Sbjct: 8 DAASTSEFHVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDN 67
Query: 67 -----VISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
+I+D MP M G+ LL V D+PV++MS + SR + + GA ++LL
Sbjct: 68 IQVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLL 127
Query: 119 KPIRMKELRNIWQHVFRK 136
KP+++ +++ + H+ K
Sbjct: 128 KPVQLSDVKKLRSHILNK 145
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD-------------GYDI 66
VL VDD L K++E++LK S++VTT AL L D ++
Sbjct: 47 VLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLDVAVNL 106
Query: 67 VISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+I+D MP M G+ LL+ + D+PV++MS + SR+ + ++ GA ++ LKP+R+
Sbjct: 107 IITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRL 166
Query: 124 KELRNIWQHVFRKKIHEVRDIENIEGFES 152
++ + H+ + + E E ++ +S
Sbjct: 167 SDMNKLKPHILKSRCREHNHQEQLQQSDS 195
>gi|290770180|gb|ADD61939.1| putative protein [uncultured organism]
Length = 230
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M+EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMEEL 108
>gi|159471197|ref|XP_001693743.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283246|gb|EDP08997.1| predicted protein [Chlamydomonas reinhardtii]
Length = 366
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P+ L VL++D D + +E LK+ +Y VT C + +A + L++ +D++++DV
Sbjct: 22 PSDLSVLLLDPDFKARQEVEAQLKENNYAVTPCSCSFEAAAHLQDADKHFDLLLADVRCM 81
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+ V +P+++MS G + VM G++ GA D+L KP+ +L+NIWQH+
Sbjct: 82 QQQSAEHKAVVQAAKSIPLVLMSESGAPNEVMLGIKLGAVDFLEKPLSPLKLKNIWQHLV 141
Query: 135 RKKI 138
R+ +
Sbjct: 142 RRML 145
>gi|255021371|ref|ZP_05293419.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Acidithiobacillus caldus ATCC 51756]
gi|340782224|ref|YP_004748831.1| two component sigma-54 specific Fis family transcriptional
regulator [Acidithiobacillus caldus SM-1]
gi|254969234|gb|EET26748.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Acidithiobacillus caldus ATCC 51756]
gi|340556377|gb|AEK58131.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Acidithiobacillus caldus SM-1]
Length = 447
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 13 FNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-YDIVISDV 71
AG RVL+V+DD+ + ++L + L++ EV ++AL+ LR DG +D+++SD
Sbjct: 1 MGAAGARVLLVEDDVDFAEVLAEGLEEAGMEVQQAADGKEALNRLR---DGQFDLILSDA 57
Query: 72 NMPDMDGFKLLEHVGLEMD-LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
M MDG+ LL + + PV+MM+ G ++ +Q+GA DYL+KP M+EL
Sbjct: 58 QMQPMDGYGLLAALRAQPGHPPVVMMTAWGTIDEAVRALQNGAVDYLVKPFAMQELLTKL 117
Query: 131 QH 132
Q
Sbjct: 118 QR 119
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
KK +V W+ +LH+KFV+AV Q+G DK P +IL++MNV LTR NVASHLQKYR + L
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
Query: 259 QKDELKTSVGGIKQ 272
E + + +++
Sbjct: 206 LAREAEAASWNLRR 219
>gi|398814793|ref|ZP_10573471.1| signal transduction histidine kinase [Brevibacillus sp. BC25]
gi|398035881|gb|EJL29107.1| signal transduction histidine kinase [Brevibacillus sp. BC25]
Length = 1024
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+++VVDDD L IL KML+ YEV+T A+ ALS+L ERK D+VISDV MP + G
Sbjct: 698 KIIVVDDDSINLNILSKMLESDQYEVSTATSAQQALSIL-ERKP-VDLVISDVMMPHVSG 755
Query: 79 FKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
++L + ++LPV++++ + ++ G Q GA DY+ KP+ EL+
Sbjct: 756 YELTRIIRKRFSVLELPVLLLTARNRSQDIVTGFQAGANDYVKKPVDAWELK 807
>gi|343505269|ref|ZP_08742847.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
gi|342808228|gb|EGU43390.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
Length = 252
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L +L+V+DD+ L +L+ Y V+ AL+LL+ R+ +D+++ DVN+P++D
Sbjct: 24 LSILLVEDDINLNHQLTALLQSEHYCVSNVECGAKALTLLKMRQ--FDLILLDVNIPNID 81
Query: 78 GFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
GF LL++V PVIM++ G +KG+++GA DY+ KP +E++ + V R+
Sbjct: 82 GFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRYGADDYISKPCNFEEVKLRIEAVLRR 140
>gi|443329058|ref|ZP_21057648.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
gi|442791333|gb|ELS00830.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
Length = 242
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRGAEP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|428777674|ref|YP_007169461.1| winged helix family two component transcriptional regulator
[Halothece sp. PCC 7418]
gi|428691953|gb|AFZ45247.1| two component transcriptional regulator, winged helix family
[Halothece sp. PCC 7418]
Length = 245
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +A++ E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEAIATFNENHP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRV- 123
Query: 139 HEVRDIENIEGFESIHMTRSGS 160
D E + G S + + GS
Sbjct: 124 ----DKEGMSGIPSSGVIQVGS 141
>gi|434397268|ref|YP_007131272.1| two component transcriptional regulator, winged helix family
[Stanieria cyanosphaera PCC 7437]
gi|428268365|gb|AFZ34306.1| two component transcriptional regulator, winged helix family
[Stanieria cyanosphaera PCC 7437]
Length = 246
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRVAEP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|11467431|ref|NP_043139.1| hypothetical protein CypaCp002 [Cyanophora paradoxa]
gi|1351749|sp|P48259.1|YCF27_CYAPA RecName: Full=Probable transcriptional regulator ycf27; AltName:
Full=OmpR-like protein
gi|1016232|gb|AAA81319.1| ycf27 [Cyanophora paradoxa]
Length = 239
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+++ +ILE L YEV T +AL++ + + ++V+ DV MP +DG
Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQ--LEHPNLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + + R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122
>gi|411118817|ref|ZP_11391197.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
gi|410710680|gb|EKQ68187.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoriales cyanobacterium
JSC-12]
Length = 245
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRNADP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 174 LTSVRKRKDAENR---HDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKI 230
L++ + A N+ H D C KK +V W+ +LH+KFVKAV Q+G D+ P +I
Sbjct: 309 LSNTDRNTKASNKVGVHSD-SCEIRGKRKKIKVDWTPELHKKFVKAVEQLGIDQAIPSRI 367
Query: 231 LDLMNVPWLTRENVASHLQKYRLYLTRLQKDE 262
L+LM V LTR NVASHLQKYR++ ++ E
Sbjct: 368 LELMKVESLTRHNVASHLQKYRMHKRQILPKE 399
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P GL+VL+ + D + L+ Y V+T DALS++ + + I I +V+
Sbjct: 38 PKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESFHIAIVEVSSS 97
Query: 75 DMDG-FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G FK LE+ DLP IM S + + +MK + GA ++L KP+ +LRNIWQHV
Sbjct: 98 SAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 154
Query: 134 FRKKIHEVRDI 144
K + +I
Sbjct: 155 VHKAFNAGANI 165
>gi|303326614|ref|ZP_07357056.1| response regulator [Desulfovibrio sp. 3_1_syn3]
gi|345890501|ref|ZP_08841371.1| hypothetical protein HMPREF1022_00031 [Desulfovibrio sp.
6_1_46AFAA]
gi|302862602|gb|EFL85534.1| response regulator [Desulfovibrio sp. 3_1_syn3]
gi|345047687|gb|EGW51549.1| hypothetical protein HMPREF1022_00031 [Desulfovibrio sp.
6_1_46AFAA]
Length = 126
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDAL----SLLRERKDGYDIVISDVNM 73
+RVL VDD++ +L+++EK L + EV+T + AL ++L E + + +V+ DV M
Sbjct: 1 MRVLFVDDEVEFLQLMEKRLSRRGMEVSTAPDGQSALDMLGAVLAEGGEMFKVVVMDVRM 60
Query: 74 PDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
P MDG + L H+ + +LPVI+++ ++G+ GA DY+LKP+ + EL
Sbjct: 61 PGMDGLETLRHMKAKAPELPVILLTGHACMGVAVQGMDLGAYDYMLKPVSISEL 114
>gi|260687106|ref|YP_003218240.1| two-component response regulator [Clostridium difficile R20291]
gi|260213123|emb|CBE04540.1| two-component response regulator [Clostridium difficile R20291]
Length = 247
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 20 KILIIDDDKELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 77
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 78 FETLEEIRKEYSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 125
>gi|428778533|ref|YP_007170319.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
gi|428692812|gb|AFZ48962.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
Length = 241
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ A +IL+ L YEV T G AL + E + D+V+ DV MP+ DG
Sbjct: 3 KILVVDDEAAVRRILQTRLSMVGYEVITAGDGEQALKVFAE--EDPDLVVLDVMMPNGDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + E ++P+IM++ G+ + + G+Q GA DYL+KP KEL V R+
Sbjct: 61 YFTCKELRKESNVPIIMLTALGDVADRITGLQIGADDYLVKPFSPKELEARINTVLRR 118
>gi|339778519|gb|AEK06141.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|225374967|ref|ZP_03752188.1| hypothetical protein ROSEINA2194_00590 [Roseburia inulinivorans DSM
16841]
gi|225213219|gb|EEG95573.1| hypothetical protein ROSEINA2194_00590 [Roseburia inulinivorans DSM
16841]
Length = 230
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKEYSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|339778525|gb|AEK06144.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778501|gb|AEK06132.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|398814194|ref|ZP_10572876.1| histidine kinase,Response regulator receiver domain protein,
partial [Brevibacillus sp. BC25]
gi|398036954|gb|EJL30160.1| histidine kinase,Response regulator receiver domain protein,
partial [Brevibacillus sp. BC25]
Length = 503
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 4 GFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG 63
F F +L +DDD L +L++ML Y++TTC RDAL LL +
Sbjct: 152 AFQETAAHAFVERKANILAIDDDPVNLMVLDRMLSSSQYQITTCTSPRDALDLLFTEQ-- 209
Query: 64 YDIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
+D++I DV MP M G++L + V +LP+++++ ++ V G GA DY+ KP
Sbjct: 210 WDLLIIDVMMPHMSGYELTQRVREHFSVSELPILLLTARSQSEDVYTGYLSGANDYVCKP 269
Query: 121 IRMKELR-NIW 130
+ EL+ +W
Sbjct: 270 VDGMELKYRVW 280
>gi|339778505|gb|AEK06134.1| timing of cab 1 [Populus balsamifera]
gi|339778507|gb|AEK06135.1| timing of cab 1 [Populus balsamifera]
gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus balsamifera]
gi|339778513|gb|AEK06138.1| timing of cab 1 [Populus balsamifera]
gi|339778515|gb|AEK06139.1| timing of cab 1 [Populus balsamifera]
gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus balsamifera]
gi|339778527|gb|AEK06145.1| timing of cab 1 [Populus balsamifera]
gi|339778531|gb|AEK06147.1| timing of cab 1 [Populus balsamifera]
gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus balsamifera]
gi|339778539|gb|AEK06151.1| timing of cab 1 [Populus balsamifera]
gi|339778541|gb|AEK06152.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778509|gb|AEK06136.1| timing of cab 1 [Populus balsamifera]
gi|339778517|gb|AEK06140.1| timing of cab 1 [Populus balsamifera]
gi|339778521|gb|AEK06142.1| timing of cab 1 [Populus balsamifera]
gi|339778529|gb|AEK06146.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|339778503|gb|AEK06133.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
++ DDD A KIL+ ML+K Y VT C L LLR+ ++ D+++ D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+LLE + +P++M++ + MK ++ GA DYL KP+ + L + V
Sbjct: 65 ELLEMIRASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKRVL 120
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 16/134 (11%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-------------KDGYDI 66
VL VDD L K++E +LK SY+VTT AL LL R + ++
Sbjct: 12 VLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVNL 71
Query: 67 VISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+I+D MP M G+ LL+ V D+PV++MS + +R+ + +Q GA ++ LKP+++
Sbjct: 72 IITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKL 131
Query: 124 KELRNIWQHVFRKK 137
+++ + H+ ++K
Sbjct: 132 ADMKKLKSHLLKRK 145
>gi|395796689|ref|ZP_10475984.1| DNA-binding response regulator [Pseudomonas sp. Ag1]
gi|421141469|ref|ZP_15601454.1| Two component Transcriptional regulator, Winged helix family
protein [Pseudomonas fluorescens BBc6R8]
gi|395339253|gb|EJF71099.1| DNA-binding response regulator [Pseudomonas sp. Ag1]
gi|404507478|gb|EKA21463.1| Two component Transcriptional regulator, Winged helix family
protein [Pseudomonas fluorescens BBc6R8]
Length = 242
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 13 FNPAGL---RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
NPA L +L ++DD + + L C ++VT C + L + R+++ +D+V+
Sbjct: 1 MNPAALGLPSILAIEDDPVLGAYVHEQLGLCGFQVTWCQNGQQGLQMARDQR--FDVVLM 58
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D+ +P MDG +L H+ +PVI+MS G + + G + GA DYL KP M ELR
Sbjct: 59 DILLPGMDGLSVLTHLRQSHSMPVILMSALGAEADRISGFRLGADDYLPKPFSMAELRVR 118
Query: 130 WQHVFRK 136
+ + R+
Sbjct: 119 IEAILRR 125
>gi|253995418|ref|YP_003047482.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera mobilis JLW8]
gi|253982097|gb|ACT46955.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera mobilis JLW8]
Length = 457
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L VDD+ + L++LE L++ Y+ T R+AL ++ ++ D V++D++MP MDG
Sbjct: 8 ILAVDDEPSMLRLLEISLRQAGYQPLTARDGREALEVINAQQ--VDCVVTDLHMPRMDGL 65
Query: 80 KLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+LL+ V + +LPVI+++ GE + +++GA DY+L+P + EL
Sbjct: 66 QLLKEVRKTDTELPVIIVTAQGEIGSAIDAMKNGASDYILRPFDLAEL 113
>gi|339778533|gb|AEK06148.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|42523020|ref|NP_968400.1| regulator protein pilR [Bdellovibrio bacteriovorus HD100]
gi|39575225|emb|CAE79393.1| regulator protein pilR [Bdellovibrio bacteriovorus HD100]
Length = 468
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ + + LE MLKK YE+T + A LL K +D++ISD+ MP + G
Sbjct: 4 RILVVDDEESIREFLEIMLKKEGYEITLAEDGQKAKDLL--AKKTFDMIISDLQMPHVTG 61
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+LL+HV D ++++ G T ++ ++ GA DYL KP ++ E+R Q+ R +
Sbjct: 62 IELLKHVKESYPDTVFMLITAFGTTETAVEAMKMGAYDYLTKPFKIDEVRLNIQNALRSR 121
Query: 138 IHEVRD 143
EV +
Sbjct: 122 NLEVEN 127
>gi|300869112|ref|ZP_07113711.1| two component transcriptional regulator [Oscillatoria sp. PCC 6506]
gi|300332881|emb|CBN58907.1| two component transcriptional regulator [Oscillatoria sp. PCC 6506]
Length = 247
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFRNTDP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|423204367|ref|ZP_17190923.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
gi|404627232|gb|EKB24037.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
Length = 426
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD++ LK++ L+ YEV T A AL LR+++ D+V+SD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQR--ADLVLSDLRMGGMDG 60
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + + + LPVI+M+ G ++ + G +L KPI EL +H
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELLATIEHAL 117
>gi|257439442|ref|ZP_05615197.1| DNA-binding response regulator VicR [Faecalibacterium prausnitzii
A2-165]
gi|257198101|gb|EEU96385.1| response regulator receiver domain protein [Faecalibacterium
prausnitzii A2-165]
Length = 247
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 20 KILIIDDDKELCTLIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 77
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 78 FETLEEIRKEYSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 125
>gi|428203515|ref|YP_007082104.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
gi|427980947|gb|AFY78547.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
Length = 246
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + + D+V+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFHQTNP--DLVVLDVMMPKLDG 68
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|339778537|gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 45 TTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGE 101
T+ AR + L DI++S+V++P G K+L+++ + DL PVIMMS E
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 102 TSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
S V+K ++ GA DYL+KP+R EL N+W H++R++
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 96
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 80/150 (53%), Gaps = 21/150 (14%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYD-------------- 65
VL VDD + K++E +LK SY+VTT AL LL R +G +
Sbjct: 12 VLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSSSPDHQE 71
Query: 66 ----IVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
++I+D MP M G+ LL+ V D+PV++MS + +R+ + ++ GA ++ L
Sbjct: 72 IDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEFFL 131
Query: 119 KPIRMKELRNIWQHVFRKKIHEVRDIENIE 148
KP+++ +++ + H+ ++K + ++ +E
Sbjct: 132 KPVKLADMKKLKSHLLKRKQPKKPQVQAVE 161
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 198 TKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
+K+ R+VW+ LH++FV V +G PK I+ LMNV LTRENVASHLQKYRLY+ R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKR 200
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 16/134 (11%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-------------KDGYDI 66
VL VDD L K++E +LK SY+VTT AL LL R + ++
Sbjct: 12 VLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVNL 71
Query: 67 VISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+I+D MP M G+ LL+ V D+PV++MS + +R+ + +Q GA ++ LKP+++
Sbjct: 72 IITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKL 131
Query: 124 KELRNIWQHVFRKK 137
+++ + H+ ++K
Sbjct: 132 ADMKKLKSHLLKRK 145
>gi|336316621|ref|ZP_08571513.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
gi|335879086|gb|EGM76993.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
Length = 1056
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
LR+LVVDD +L +M++ C + V CG + AL LL +K +D+VI+D NMP MD
Sbjct: 828 LRILVVDDHDVNRMLLVRMVEYCQHHVKACGDGKQALELL--QKHHFDLVITDCNMPVMD 885
Query: 78 GFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G++L + L+ D+PV ++ E + + G + L KPI + EL+ +++
Sbjct: 886 GYQLTSAIRLDPILKDIPVFGLTASAENKERQRCLHAGMNECLFKPIGIAELQQVFKAYL 945
Query: 135 RKK--IHEVRDIENIEG 149
+ + + V ++++ G
Sbjct: 946 KSQPSVFSVEKLKHLAG 962
>gi|410637506|ref|ZP_11348086.1| transcriptional regulatory protein zraR [Glaciecola lipolytica E3]
gi|410143129|dbj|GAC15291.1| transcriptional regulatory protein zraR [Glaciecola lipolytica E3]
Length = 451
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD L+++ L+ Y+V T ++AL LL + +D+V+SD+ MP +DG
Sbjct: 11 RILLVDDDENLLRLMTIRLQGEGYQVATAEGGKEALRLLNTQ--SFDVVLSDLRMPGLDG 68
Query: 79 FKLLEH-VGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
L E V L D+PVI+M+ G ++ Q G +L KPI LR +
Sbjct: 69 LSLFEEIVSLRRDIPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHDALREL 120
>gi|210616118|ref|ZP_03290951.1| hypothetical protein CLONEX_03170 [Clostridium nexile DSM 1787]
gi|210149938|gb|EEA80947.1| hypothetical protein CLONEX_03170 [Clostridium nexile DSM 1787]
Length = 226
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 74/120 (61%), Gaps = 8/120 (6%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L+++DD + ++ L+ +++ +AR A+ LL+ + + +VI DV +PD +
Sbjct: 2 IRILLIEDDEHIAQSIQFFLEGEGFQIKVAAMARQAMELLK--SEDFQLVILDVTLPDGN 59
Query: 78 GFKLLEHVGLEMDLPVIMM-SVDGETSRVMKGVQHGACDYLLKPIRMKEL----RNIWQH 132
GF+L E + +LPVI + ++DGE ++KG + GA +Y+ KP R +EL RN+ +H
Sbjct: 60 GFELFEEIKARKELPVIFLTALDGE-EEIVKGFELGADEYITKPFRPRELLSRIRNVIRH 118
>gi|410696421|gb|AFV75489.1| putative domain HDIG-containing protein [Thermus oshimai JL-2]
Length = 316
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVLVVDD+ +L + L EV ++AL LLRE+ + +V++D++MP MD
Sbjct: 1 MRVLVVDDEPTQRLLLMRALAPLGVEVAEARNGKEALDLLREK--FFHLVLTDLHMPVMD 58
Query: 78 GFKLLEHVGLEMD-LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR-NIWQHVFR 135
G +L+ V + LPVI+++ DGE +KG++ GA D+L +P+ + ELR + + R
Sbjct: 59 GLELIRAVKAQDPFLPVILLTADGERETRLKGLEAGADDFLNRPLDLAELRLRVKGQLER 118
Query: 136 KKIHEVRDIENIE 148
+++ E ++E +E
Sbjct: 119 RRLQE--EVEELE 129
>gi|312961644|ref|ZP_07776142.1| two component transcriptional regulator, winged helix family
[Pseudomonas fluorescens WH6]
gi|311283903|gb|EFQ62486.1| two component transcriptional regulator, winged helix family
[Pseudomonas fluorescens WH6]
Length = 242
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 13 FNPAGLR---VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
NPA + +L ++DD + + L +C ++VT C R L + R++ +D+V+
Sbjct: 1 MNPAAVSLPSILTIEDDPVLGAYVHEHLGRCGFQVTWCRNGRQGLQMARDQ--AFDVVLM 58
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D+ +P +DG +L H+ +PVI+MS G + + G + GA DYL KP M ELR
Sbjct: 59 DILLPGLDGLSILTHLRQSHSIPVILMSALGAEADRVSGFRLGADDYLPKPFSMVELRVR 118
Query: 130 WQHVFRK 136
+ + R+
Sbjct: 119 IEAILRR 125
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 258
KK +V W+ +LH+KFV+AV Q+G DK P +IL++MNV LTR NVASHLQKYR + L
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
Query: 259 QKDELKTSVGGIKQ 272
E + + +++
Sbjct: 206 LAREAEAASWNLRR 219
>gi|225375459|ref|ZP_03752680.1| hypothetical protein ROSEINA2194_01084 [Roseburia inulinivorans DSM
16841]
gi|347532992|ref|YP_004839755.1| two-component response regulator [Roseburia hominis A2-183]
gi|225212656|gb|EEG95010.1| hypothetical protein ROSEINA2194_01084 [Roseburia inulinivorans DSM
16841]
gi|345503140|gb|AEN97823.1| two-component response regulator [Roseburia hominis A2-183]
Length = 230
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDKELCTLIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKEYSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|395216223|ref|ZP_10401240.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
gi|394455509|gb|EJF09975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
Length = 433
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L++DDD + +L LK+ YEV T A + LS L + D +D++++D +PD +G
Sbjct: 3 RILLIDDDPTFCLMLSTFLKRQQYEVKTAYTAGEGLSQL--KADSFDLILTDFRLPDKNG 60
Query: 79 FKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI 121
+LLE + L+ +PVI+M+ + +K ++ GA +YL KPI
Sbjct: 61 LELLEQIRVLDTQVPVILMTHYADIRTAVKAIKMGAFEYLAKPI 104
>gi|256371361|ref|YP_003109185.1| winged helix family two component transcriptional regulator
[Acidimicrobium ferrooxidans DSM 10331]
gi|256007945|gb|ACU53512.1| two component transcriptional regulator, winged helix family
[Acidimicrobium ferrooxidans DSM 10331]
Length = 237
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 14 NPA-GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
PA G+RVLVVDD+L ++L+ L Y+V+ R+AL +LR K D++I DV
Sbjct: 6 KPAKGVRVLVVDDELPITELLQMALTFEGYDVSVASSGREALDVLRTVKP--DLLILDVM 63
Query: 73 MPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
MP MDGF LL + E D+PV++++ ++G+Q G+ DY+ KP + EL +
Sbjct: 64 MPGMDGFTLLRRLREERNDVPVLLLTAKDAVEDRVQGLQLGSDDYVTKPFSLAELVARVE 123
Query: 132 HVFRK 136
+ R+
Sbjct: 124 AILRR 128
>gi|254432325|ref|ZP_05046028.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
gi|197626778|gb|EDY39337.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
Length = 253
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ + +ILE L Y+V T +AL RE D+V+ DV MP +DG+
Sbjct: 16 ILVVDDEASIRRILETRLSMIGYQVVTASDGMEALECFRESHP--DLVVLDVMMPKLDGY 73
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + E D+P++M++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 74 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRR 130
>gi|254421179|ref|ZP_05034897.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
gi|196188668|gb|EDX83632.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
Length = 242
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFRNTIP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|399008251|ref|ZP_10710728.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pseudomonas sp. GM17]
gi|398117180|gb|EJM06933.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pseudomonas sp. GM17]
Length = 240
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L ++DDL + + L +C ++VT C ++ L++ ++ YD+V+ D+ +P MDG
Sbjct: 10 RILSIEDDLVLGAYVHEQLGRCGFDVTWCQNGQEGLAMASQQP--YDVVLMDILLPGMDG 67
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+L H PV++MS G + + G + GA DYL KP M ELR + + R+
Sbjct: 68 LTVLTHFRQSHSTPVLLMSALGAEADRISGFRLGADDYLPKPFSMAELRVRIEAILRR 125
>gi|148655422|ref|YP_001275627.1| response regulator receiver protein [Roseiflexus sp. RS-1]
gi|148567532|gb|ABQ89677.1| response regulator receiver protein [Roseiflexus sp. RS-1]
Length = 430
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 1 MENGFSSPRNDTFNPAGLRVLVVDDDLAWLKILEKML--KKCSYEVTTCGLARDALSLLR 58
M G +P + PA +RV++VDD LEK+L +K V R+AL+L +
Sbjct: 1 MAGGSRTP--EAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAK 58
Query: 59 ERKDGYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYL 117
+ + D+V+ D+NMPDMDG E + ++ + VIMMSV GE + + + GA ++L
Sbjct: 59 QHRP--DVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFL 116
Query: 118 LKPIRMKELRNIWQHVFR 135
KPI +EL + +HV+R
Sbjct: 117 PKPIGAEELYSAIRHVYR 134
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
L VL+V+DD + L ++ ML+ C + VTT ++A+ L + D+V++D+ MP++D
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 78 GFKLLEHVGLE----MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G +L++ V +P+I+MS K + GA DYL+KP++ ++ ++ +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 134 FRKKIHEVRDIENIEGFESIHMTRSGSD----QSVDGPLLTGEDLTSV 177
D IH SG+ Q GP G+D T+
Sbjct: 173 VGGGAGMSVD--------RIHSNNSGASTETAQGRRGPSPDGQDATTA 212
>gi|428309726|ref|YP_007120703.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Microcoleus sp. PCC 7113]
gi|428251338|gb|AFZ17297.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Microcoleus sp. PCC 7113]
Length = 248
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL R D+V+ DV MP +DG
Sbjct: 13 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRNADP--DLVVLDVMMPKLDG 70
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 71 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 128
>gi|51891888|ref|YP_074579.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
gi|51855577|dbj|BAD39735.1| two-component response regulator, probably involved in phosphate
sensing [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P R+LVVDD+ + L+++ L++ +EV T D L + RE + D+VI DV +P
Sbjct: 3 PVPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREEE--IDLVILDVMLP 60
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DGF++L + +LPV+M++ GE + G + GA DY+ KP +EL + +
Sbjct: 61 GIDGFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAIL 120
Query: 135 RK 136
R+
Sbjct: 121 RR 122
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 16/134 (11%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRER-------------KDGYDI 66
VL VDD L K++E +LK SY+VTT AL LL R + ++
Sbjct: 12 VLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVNL 71
Query: 67 VISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRM 123
+I+D MP M G+ LL+ V D+PV++MS + +R+ + +Q GA ++ LKP+++
Sbjct: 72 IITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKL 131
Query: 124 KELRNIWQHVFRKK 137
+++ + H+ ++K
Sbjct: 132 ADMKKLKSHLLKRK 145
>gi|302343346|ref|YP_003807875.1| Fis family transcriptional regulator [Desulfarculus baarsii DSM
2075]
gi|301639959|gb|ADK85281.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfarculus baarsii DSM 2075]
Length = 449
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDD+ +L +LE +L+ Y+V T + AL L E D D+VI+D+ MP M G
Sbjct: 3 RILVVDDEKNYLVVLEALLRGEGYDVRTADNGQAALRLADE--DEPDLVITDMKMPRMSG 60
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
+L++ + ++ DLPVI+M+ G ++ ++ GA DY++KP +EL + R +
Sbjct: 61 IELIQALRVDHPDLPVIVMTAYGTVENAVEAMKLGATDYIIKPFENRELLLTTEKTLRMR 120
>gi|218960391|ref|YP_001740166.1| putative response regulator [Candidatus Cloacamonas
acidaminovorans]
gi|167729048|emb|CAO79959.1| putative response regulator [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 360
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 72/112 (64%), Gaps = 8/112 (7%)
Query: 19 RVLVVDDDLAWLKILEKMLKK---CSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPD 75
++L+VDDDLA L + L+K C +T C +R+AL LL + ++++ISD+ MP+
Sbjct: 7 QILIVDDDLAILDCIRMSLQKDFPC--RITACSDSREALELLE--SNIFNVIISDIGMPN 62
Query: 76 MDGFKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+ GF+LLE++ L ++PVI+++ + +T ++ VQ GA D L KP + +L
Sbjct: 63 LSGFQLLEYINKLNPNIPVILITGEVDTEKIRSAVQLGAFDILHKPFELSDL 114
>gi|428217568|ref|YP_007102033.1| winged helix family two component transcriptional regulator
[Pseudanabaena sp. PCC 7367]
gi|427989350|gb|AFY69605.1| two component transcriptional regulator, winged helix family
[Pseudanabaena sp. PCC 7367]
Length = 250
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L YEV T +A+ + + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIDMFHH--EIPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|449015491|dbj|BAM78893.1| MYB-related protein [Cyanidioschyzon merolae strain 10D]
Length = 798
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
AS +K R+VW+ LH++FVKAVN IG D+ PK ++ LMNV LT E+V SHLQKYR
Sbjct: 509 ASIMRKRRLVWTPQLHERFVKAVNLIGVDQAMPKILVSLMNVEGLTPEHVKSHLQKYRRN 568
Query: 255 LTRLQKDE 262
L R + ++
Sbjct: 569 LRRAKSEQ 576
>gi|298206890|ref|YP_003715069.1| rteB, two-component system response regulator [Croceibacter
atlanticus HTCC2559]
gi|83849524|gb|EAP87392.1| rteB, two-component system response regulator [Croceibacter
atlanticus HTCC2559]
Length = 478
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVV+DD+A+ K+L K L++ ++V+T A + E+K Y+++I+D+ +PD G
Sbjct: 25 RILVVEDDVAFGKMLSKFLERKGFQVSTALNGNHARKQMEEQK--YELLITDLKLPDDSG 82
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
LLE+ + D +I+M+ E S ++ ++ GA DY+ KP R +EL
Sbjct: 83 LNLLEYCQSVSADTNIILMTSYAEVSTAVEAIKKGALDYISKPFRPEEL 131
>gi|406895984|gb|EKD40397.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator), partial [uncultured bacterium]
Length = 202
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD L++LE L+ Y V AL LL+ + D+++SD+ MP+M G
Sbjct: 6 RILIVDDDQNILEVLEARLQAAGYRVYRAASGPAALDLLKSKP--VDVLVSDMKMPEMSG 63
Query: 79 FKL-LEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+L +E V ++ LPVI ++ G + V+ GA DYL KP KEL
Sbjct: 64 MELFVEAVAIQPQLPVIFLTAYGTIPDAVTAVKAGAVDYLTKPFDGKEL 112
>gi|188996860|ref|YP_001931111.1| response regulator receiver protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931927|gb|ACD66557.1| response regulator receiver protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 130
Score = 75.5 bits (184), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSY-EVTTCGLARDALSLLRERKDGYDIVISDVNM 73
P R+L VDD KI++ +L + Y + ++AL+ L++ K YD+V+ D NM
Sbjct: 4 PVASRILTVDDMATMRKIIKSLLNQLGYTNIDEAENGKEALAKLKQSK--YDLVLLDWNM 61
Query: 74 PDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR--- 127
P+MDG LL+ + + D+PVIM++ + + V+ +Q GA +Y++KP + L+
Sbjct: 62 PEMDGITLLQEIRKDTHLKDIPVIMVTAEAKKENVLIAIQSGANNYIVKPFTAETLKEKL 121
Query: 128 -NIWQHV 133
+WQ +
Sbjct: 122 EKVWQQI 128
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
Query: 16 AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKD------GYD---- 65
A VL VDD L K++E++LK SY+VTT AL L KD +D
Sbjct: 8 AQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAFDSPKN 67
Query: 66 -------IVISDVNMPDMDGFKLLEHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACD 115
+VI+D MP M G++LL+ V D+PV++MS + SR+ + ++ GA +
Sbjct: 68 HQVVEVNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINRCLEEGAEE 127
Query: 116 YLLKPIRMKELRNIWQHVFRKK 137
+ LKP+R+ ++ + H+ + K
Sbjct: 128 FFLKPVRLSDVNKLRPHMMKAK 149
>gi|20807567|ref|NP_622738.1| chemotaxis protein CheY [Thermoanaerobacter tengcongensis MB4]
gi|20516103|gb|AAM24342.1| CheY-like receiver domains [Thermoanaerobacter tengcongensis MB4]
Length = 267
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD + +++ +L Y V + +A+ ++ RK+ +D++I D+N+PD +GF
Sbjct: 10 ILVVDDSVLIRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 80 KLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+ + ++ E +PVI++S+D + + V+ GA DYL+KP + +EL
Sbjct: 70 EFIRNLKSEEKYRHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEEL 119
>gi|403382341|ref|ZP_10924398.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1041
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD+ A LK+L ML+ Y V G ++AL ++ K D++I D+ MP M G+
Sbjct: 713 ILVVDDEPANLKVLIIMLQSLHYSVIAVGSGQEALDVITTEK--VDLLILDLMMPHMTGY 770
Query: 80 KLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
++ + V + DL PVI+++ G+ S ++ Q GA DYL KP+ +KEL
Sbjct: 771 EVCKTVRQDYDLVELPVIILTASGQLSDLVASFQFGANDYLQKPVNLKEL 820
>gi|260588299|ref|ZP_05854212.1| DNA-binding response regulator VicR [Blautia hansenii DSM 20583]
gi|260541350|gb|EEX21919.1| DNA-binding response regulator VicR [Blautia hansenii DSM 20583]
Length = 230
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C +D L L+E++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKDGLQKLKEQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|85860826|ref|YP_463028.1| response regulator [Syntrophus aciditrophicus SB]
gi|85723917|gb|ABC78860.1| response regulator with sigma 54 interaction domain [Syntrophus
aciditrophicus SB]
Length = 502
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+VL+VDD+L +L+ MLKK Y+V +AL L K+ D+V++D+ MP + G
Sbjct: 3 KVLIVDDELNMRVVLQAMLKKKGYQVAQAADGLEALECL--EKEQIDVVVTDLKMPKLSG 60
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
LLEHV + PVI+++ G + ++ GA DY+ KP EL ++ + R +
Sbjct: 61 LGLLEHVTSTYPETPVIIITAHGTIETAVDALKKGAFDYITKPFDRDELISVIEKAIRTR 120
Query: 138 I 138
I
Sbjct: 121 I 121
>gi|317968094|ref|ZP_07969484.1| two-component response regulator [Synechococcus sp. CB0205]
Length = 249
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
PA +LVVDD+ + +ILE L Y+V T ++AL R D+V+ DV MP
Sbjct: 7 PAKETILVVDDEPSIRRILETRLSMIGYQVVTACDGQEALEAFRNTNP--DLVVLDVMMP 64
Query: 75 DMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
+DG+ + + + E D+P++M++ G+ + + G++ GA DY++KP KEL + V
Sbjct: 65 KLDGYGVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVL 124
Query: 135 RK 136
R+
Sbjct: 125 RR 126
>gi|253579795|ref|ZP_04857063.1| two-component system response regulator [Ruminococcus sp.
5_1_39B_FAA]
gi|251848794|gb|EES76756.1| two-component system response regulator [Ruminococcus sp.
5_1_39BFAA]
Length = 230
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|254478010|ref|ZP_05091394.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|214036014|gb|EEB76704.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 267
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDD + +++ +L Y V + +A+ ++ RK+ +D++I D+N+PD +GF
Sbjct: 10 ILVVDDSVLVRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 80 KLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
+ + ++ E +PVI++S+D + + V+ GA DYL+KP + +EL
Sbjct: 70 EFIRNLKSEEKYKHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEEL 119
>gi|149924907|ref|ZP_01913239.1| regulator protein pilR [Plesiocystis pacifica SIR-1]
gi|149814217|gb|EDM73828.1| regulator protein pilR [Plesiocystis pacifica SIR-1]
Length = 363
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+VDD++ + L L + +EVT DAL LL E + YD+VI+D+ MP + G
Sbjct: 1 MLIVDDEVGMREFLAVCLGRAGHEVTAAKSGADALRLLSEEEGRYDVVITDLTMPGVPGM 60
Query: 80 KLLEHVGLEMDLP-VIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
++L H P VIM++ T ++ ++ GA DYL+KP ++ E++ + Q ++
Sbjct: 61 EVLRHACALPSAPQVIMVTAYATTDTAVEAMKIGAYDYLIKPFKVDEIQVVVQRALERR 119
>gi|126698685|ref|YP_001087582.1| two-component response regulator,Tn1549-like,CTn4-Orf26
[Clostridium difficile 630]
gi|115250122|emb|CAJ67943.1| Two-component response regulator,Tn1549-like,CTn4-Orf26
[Clostridium difficile 630]
Length = 230
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+VL++DDD ++++ + E C ++ L L+ER+ Y +VI D+ MP MDG
Sbjct: 3 KVLIIDDDKELCALIKRSVLSEDIEADFCNTGKEGLQKLKERE--YQLVILDIMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + +++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSASKVRGLRAGADDYLTKPFDMDEL 108
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-YDIVISDVNMPDMD 77
RVLVVDD+ K+L +L + YEV T AL+ ++ G +D+VISD+ MP+MD
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 78 GFKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
G LLE + E LPVI+++ G ++ V+ GA D+L KP R+ H+ K
Sbjct: 67 GMALLEALTAEDSSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFE----RDQIDHLVSK 122
Query: 137 KIHEVR 142
+ R
Sbjct: 123 AVKTRR 128
>gi|168011157|ref|XP_001758270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669165|gb|AAV54521.1| golden 2-like protein 2 [Physcomitrella patens]
gi|162690726|gb|EDQ77092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 195 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 254
A KKA+V W+ +LH++FV AV Q+G +K P +IL+LM V LTR N+ASHLQKYR +
Sbjct: 221 APGKKKAKVDWTPELHRRFVHAVEQLGVEKAYPSRILELMGVQCLTRHNIASHLQKYRSH 280
Query: 255 LTRLQKDELKTS 266
L E + +
Sbjct: 281 RRHLAAREAEAA 292
>gi|260063704|ref|YP_003196784.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
gi|88783149|gb|EAR14322.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
Length = 229
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG-YDIVISDVNMPD 75
G R+L+++D+ A + + L++ Y V C L +L +DG +D+VI D+ +P
Sbjct: 2 GNRILLIEDEYAIASFVTQGLQESGYAVAVCYDGEKGLEML---QDGDFDLVILDIVLPG 58
Query: 76 MDGFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
MDG ++ + G +DLP++M++ G T V++G+ GA DYL+KP + KEL + +
Sbjct: 59 MDGREVARTIRGQGLDLPILMLTALGSTENVVRGLDSGADDYLVKPFKFKELEARVRALS 118
Query: 135 RKK 137
R++
Sbjct: 119 RRR 121
>gi|374993930|ref|YP_004969429.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfosporosinus orientis DSM 765]
gi|357212296|gb|AET66914.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfosporosinus orientis DSM 765]
Length = 463
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+VL++DD+ A I+ + LK+ YEV G AR+ LSLL++ D V+ D+ +PD DG
Sbjct: 6 KVLILDDEEALRAIIAQRLKRKGYEVLEAGTAREGLSLLKDTL--IDAVLLDIKLPDGDG 63
Query: 79 FKLLEHVG-LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKK 137
LL + + DL VIM++ +G ++ ++ GA DYL KP + EL Q +
Sbjct: 64 LILLPKIKQFQTDLHVIMLTGNGTIESAIEAMKLGAYDYLTKPCNLSELEITLQKALENR 123
>gi|365102038|ref|ZP_09332576.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
gi|363646537|gb|EHL85779.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
Length = 441
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ +LVVDDD++ IL+ +L+ YEV R AL L+RER +D+V+ DV M +MD
Sbjct: 6 INILVVDDDISHCTILQALLRGWGYEVALAYSGRAALELVRERV--FDLVLCDVRMAEMD 63
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
G L+ + L +PV++M+ ++ ++ GA DYL+KP+ L Q K
Sbjct: 64 GIATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRL----QETLEK 119
Query: 137 KIHEVRD 143
+ R+
Sbjct: 120 ALAHTRE 126
>gi|346309340|ref|ZP_08851433.1| hypothetical protein HMPREF9457_03142 [Dorea formicigenerans
4_6_53AFAA]
gi|345899715|gb|EGX69553.1| hypothetical protein HMPREF9457_03142 [Dorea formicigenerans
4_6_53AFAA]
Length = 230
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|443311958|ref|ZP_21041580.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
gi|442778033|gb|ELR88304.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
Length = 892
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 5 FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGY 64
SSP + A +L+VDD +A K+L+++L K Y+V C ++A+ +L D Y
Sbjct: 759 LSSPAFKPSSSAKATILIVDDSIAVRKLLDQLLSKSGYQVMQCRDGKEAVEVLNRSGDFY 818
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKP 120
D+VISD+ MP MDGF LL + +LPV M++ K GA Y KP
Sbjct: 819 DLVISDIEMPRMDGFTLLREIRTSKNWSNLPVAMLTSRENDQHRQKAKALGANAYFTKP 877
>gi|226310855|ref|YP_002770749.1| two-component response regulator [Brevibacillus brevis NBRC 100599]
gi|226093803|dbj|BAH42245.1| two-component response regulator [Brevibacillus brevis NBRC 100599]
Length = 229
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+V+D+L ++++ L+K YEV + +A+ L E+K D+V+ DV +P+ +G+
Sbjct: 4 ILLVEDELVIARVIKAYLQKAGYEVWSANDGLEAMELFDEKKP--DLVLLDVMLPERNGW 61
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIH 139
++L+++ + PVI+M+ G+T + +KG+ GA DY+ KP E+ V R+ +
Sbjct: 62 EILQYIREKSSCPVIIMTALGQTDQKLKGLNQGADDYITKPFVADEVVARVNAVLRRSVI 121
Query: 140 EVRDIEN-IEG-----FESIHMTRSG 159
V+D E + G F+S H+T G
Sbjct: 122 LVKDQETRLFGSLKINFQSHHVTLHG 147
>gi|60893116|gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+VDD ++ +LKK Y+VT D L L + D++ISD+NMP MDGF
Sbjct: 6 ILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKLYSMEQ-VDLIISDINMPKMDGF 64
Query: 80 KLLEHVG---LEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR-MKELRNI 129
+ HV L DLP++++S +G+ + +G+Q GA Y++KP + K LRN+
Sbjct: 65 TFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANLYMVKPAQPEKLLRNV 118
>gi|22298565|ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
gi|22294745|dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 6 SSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYD 65
+SP P +VL+VDD + ++L+++L++ Y V C ++AL L D
Sbjct: 728 ASPMESPQQPITPQVLIVDDSITVRRLLDRVLRQAGYNVVQCRDGKEALDFLLAAGDQVS 787
Query: 66 IVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
+VI+D+ MP +DG+ LLE + L LPV M++ G + K +Q GA Y+ KP +
Sbjct: 788 LVITDIEMPRLDGYDLLEAIRLSARLRHLPVAMLTSRGGDTHRQKALQLGANGYITKPFQ 847
>gi|410464065|ref|ZP_11317534.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409982822|gb|EKO39242.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 130
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
GLRVL VDD+ +++ L K VT G DAL+LL ++ +D+VI D+ MP M
Sbjct: 2 GLRVLAVDDEADFIETLVKRFTYRQIPVTAAGNGPDALALL--ERESFDVVILDMRMPGM 59
Query: 77 DGFKLLEHVGLEMDL-PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF- 134
DG +L+ + L VI+++ M+G+ GA DY+LKP+ EL + +
Sbjct: 60 DGLAVLQEIKKRHPLVEVIILTGHASVESGMQGMSLGAYDYVLKPVDFGELLEKAKKAYE 119
Query: 135 RKKIHEVR 142
RKK++E R
Sbjct: 120 RKKLNESR 127
>gi|6862579|gb|AAD30119.2| DNA binding response regulator RpaB [Tolypothrix sp. PCC 7601 =
UTEX B 481]
Length = 233
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 22 VVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGFKL 81
+VDD+ + +ILE L Y+V T G +AL R K D+V+ DV MP +DG+ +
Sbjct: 1 MVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KADPDLVVLDVMMPKLDGYGV 58
Query: 82 LEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 59 CQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 113
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 11 DTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISD 70
+T++P+ + +LVVDDD KILE LKK Y VT +A ++L YD+V++D
Sbjct: 174 NTYSPSKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTD 233
Query: 71 VNMPDMDGFKLLEHVGLEMDL---PVIMMS---VDGETSRVMKGVQHGACDYLLKPIR-- 122
V MP++ GF LL+ + ++ PVI+MS +D + + ++ G D+L KPI
Sbjct: 234 VMMPNISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYAN--DTIKIGGQDFLTKPIAKE 291
Query: 123 --MKELRNIWQHVFRKK 137
K++ + + R+K
Sbjct: 292 LLKKKIDTVLNSILREK 308
>gi|293189436|ref|ZP_06608156.1| DNA-binding response regulator [Actinomyces odontolyticus F0309]
gi|292821526|gb|EFF80465.1| DNA-binding response regulator [Actinomyces odontolyticus F0309]
Length = 227
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDDD+A +++ +L+ YEV +C AL+ +E D+V+ DV +P MDG
Sbjct: 4 RILVVDDDVALAEMIGIVLQNEGYEVVSCADGSAALTQFQEHNP--DLVLLDVMLPGMDG 61
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F + + D P++M++ +TS V+ G++ GA DY+ KP + KEL
Sbjct: 62 FDVCRAIRRVSDAPIVMLTARSDTSDVVTGLEAGADDYVPKPFKPKEL 109
>gi|395652548|ref|ZP_10440398.1| DNA-binding response regulator [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 242
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 13 FNPAGL---RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
NP + R+L ++DD + + L +C ++VT C + L L R++ +D+V+
Sbjct: 1 MNPVAIDLPRILTIEDDPVLGAYVHEHLGRCGFQVTWCQNGQQGLQLARDQ--AFDVVLM 58
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D+ +P +DG +L H+ +PVI+MS G + + G + GA DYL KP M ELR
Sbjct: 59 DILLPGLDGLSILTHLRRSHSIPVILMSALGAEADRVSGFRLGADDYLPKPFSMIELRVR 118
Query: 130 WQHVFRK 136
+ + R+
Sbjct: 119 IEAILRR 125
>gi|350272045|ref|YP_004883353.1| putative two-component response regulator [Oscillibacter
valericigenes Sjm18-20]
gi|348596887|dbj|BAL00848.1| putative two-component response regulator [Oscillibacter
valericigenes Sjm18-20]
Length = 146
Score = 75.1 bits (183), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
+++VVDDD +++ +LKK +EV DAL+ L K D+++ D+ MP+MDG
Sbjct: 3 KLMVVDDDSNIRELIRLILKKEGFEVLEASDGVDALAKLENNK--VDLIVLDIMMPNMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK-- 136
++ DLP++M++ G TS+ +KG + GA DYL KP EL + + ++
Sbjct: 61 WEFCREARKFWDLPILMLTAKGGTSQKVKGFELGADDYLTKPFEPAELTARVKALLKRCN 120
Query: 137 ----KIHEVRDIENIEG 149
KI E+ I I G
Sbjct: 121 IAASKIIELGKITTIRG 137
>gi|406980680|gb|EKE02250.1| hypothetical protein ACD_20C00407G0003 [uncultured bacterium]
Length = 248
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDD+ + +ILE LK YEV T +AL K D++I DV MP +DG
Sbjct: 16 RILIVDDEASIRRILETRLKMVGYEVLTAADGEEALDAFS--KFNPDLLILDVMMPKLDG 73
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ ++ V + P+I+++ G+ S + G++ GA DY++KP KEL + V R+
Sbjct: 74 YGVVREVRKTSETPIIVLTALGDVSERITGLELGADDYVIKPFSPKELEARVKAVLRR 131
>gi|145297354|ref|YP_001140195.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362107|ref|ZP_12962751.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142850126|gb|ABO88447.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356686742|gb|EHI51335.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 426
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+L+VDDD++ LK++ L+ YEV T A AL LR+++ D+V+SD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQR--ADLVLSDLRMAGMDG 60
Query: 79 FKLLEHVGLE-MDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
L E + + + LPVI+M+ G ++ + G +L KPI EL +H
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHAL 117
>gi|381187060|ref|ZP_09894625.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
gi|379650670|gb|EIA09240.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
Length = 442
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+++DD+++ K+LEK L K +Y VTT A +A + L + + +D+V++D+ +PD DG
Sbjct: 3 KILLIEDDISFCKLLEKFLIKNAYTVTTSFSAAEARNAL--KAEIFDLVLTDLRLPDEDG 60
Query: 79 FKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPI 121
L+ + + PVI+M+ + + +K +++GA DY+ KPI
Sbjct: 61 ISLMAEIKVAFPQTPVILMTGYADVNTAVKAIKNGASDYISKPI 104
>gi|452851397|ref|YP_007493081.1| Response regulator receiver protein (fragment) [Desulfovibrio
piezophilus]
gi|451895051|emb|CCH47930.1| Response regulator receiver protein (fragment) [Desulfovibrio
piezophilus]
Length = 123
Score = 75.1 bits (183), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 15 PAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMP 74
P +RVL+VDD++ + ++L K L K VT+ A+ LR +D+ I D+ M
Sbjct: 3 PPSIRVLIVDDEIGFTEVLHKRLAKRGLTVTSATSGSQAIRTLRLHD--FDVAILDLKME 60
Query: 75 DMDGFKLLE-HVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
DMDG ++L+ + ++PVIM++ G +G++ GA DYLLKP M+ + I
Sbjct: 61 DMDGIEVLQIFKKMVPEMPVIMLTGHGSEKAAKEGLKAGAYDYLLKPCAMEAVLEIIHQA 120
Query: 134 FRK 136
+K
Sbjct: 121 VKK 123
>gi|291545612|emb|CBL18720.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Ruminococcus sp. SR1/5]
Length = 230
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L++DDD ++++ ++ + E C ++ L LRE++ Y +V+ DV MP MDG
Sbjct: 3 KILIIDDDRELCALIKRSVQAENIEADFCNTGKEGLQKLREQE--YQLVVLDVMMPGMDG 60
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 61 FETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 108
>gi|320449473|ref|YP_004201569.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermus scotoductus SA-01]
gi|320149642|gb|ADW21020.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermus scotoductus SA-01]
Length = 225
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+RVL+VDDD A L++L L+ +EV AL L D++I D+ +P +D
Sbjct: 1 MRVLLVDDDPALLEVLGAYLRGAGFEVLEAKDGEKALELFPR----ADLIILDLMLPKLD 56
Query: 78 GFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
GFK+LE V E +LP++M++ GE +KG++ GA DY++KP KE+ + + R+
Sbjct: 57 GFKVLEEVRRERPELPILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRR 116
>gi|222628652|gb|EEE60784.1| hypothetical protein OsJ_14365 [Oryza sativa Japonica Group]
Length = 335
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 36/241 (14%)
Query: 15 PAG-LRVLVVDDDLAWLKILEKMLK-KCSYEVTTCGLARDALSLLRERKDGYDIVISDVN 72
PAG L +V+D+D ML + ++ VT AL L+ +G D+V++DV+
Sbjct: 8 PAGRLSAMVIDEDKCHADSTSYMLSAELNFSVTVFTSPIKALDFLQNHAEGVDLVLADVH 67
Query: 73 MPDMDGFKLLEHVGLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 130
M +M+GF L+ V E+ + VIMMS + + + V+ GA + KP+ ++N+W
Sbjct: 68 MEEMNGFDFLK-VARELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 131 QHVFRK--KIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHD 188
Q+V K ++ +++D+ G ES + S AEN +
Sbjct: 127 QYVDLKVLRMEKIKDLLQGIGDESTCANETNS---------------------LAENPKN 165
Query: 189 DRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHL 248
D + KK ++W+ L +KF+ A+ +G D PK I +M V + +A+HL
Sbjct: 166 D-------TKKKYYLMWTPHLQKKFLHALQILGKD-ASPKNIKKIMGVDNIDCRQIAAHL 217
Query: 249 Q 249
Q
Sbjct: 218 Q 218
>gi|218247106|ref|YP_002372477.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 8801]
gi|257060175|ref|YP_003138063.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 8802]
gi|218167584|gb|ACK66321.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 8801]
gi|256590341|gb|ACV01228.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 8802]
Length = 243
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL K D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTFH--KADPDLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|390565258|ref|ZP_10245941.1| putative transcriptional regulator ycf27 [Nitrolancetus hollandicus
Lb]
gi|390171496|emb|CCF85275.1| putative transcriptional regulator ycf27 [Nitrolancetus hollandicus
Lb]
Length = 233
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+LVVDDD+ L+++ L+ Y V T G DALS L E + D+V+ D+ MP MDGF
Sbjct: 6 ILVVDDDVPILRLVRAKLQADGYSVMTAGNGEDALSALEEERP--DLVVLDLMMPGMDGF 63
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIH 139
+ + + + +P+I+++ S ++G+ GA DY+ KP EL + V R+
Sbjct: 64 ETMRRIREDSTIPIILLTARTGASDKIQGLDLGADDYVTKPFNPDELSSRIAAVLRRTTG 123
Query: 140 EVRDIENIEGFESIHMTRSGSDQSVDG 166
R + ++ + + +VDG
Sbjct: 124 GARPKNQVLRYDHLTINLEKRRVTVDG 150
>gi|186686341|ref|YP_001869537.1| two component transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186468793|gb|ACC84594.1| two component transcriptional regulator, winged helix family
[Nostoc punctiforme PCC 73102]
Length = 241
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +ALS R D+++ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTASDGEEALSTFRVSTP--DLIVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKI 138
+ + + + E D+P+IM++ G + + G++ GA DY+ KP KEL + R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGNVADRITGLELGADDYMTKPFSPKELEARIACILRRCF 124
Query: 139 HE 140
H+
Sbjct: 125 HK 126
>gi|395494518|ref|ZP_10426097.1| DNA-binding response regulator [Pseudomonas sp. PAMC 25886]
Length = 242
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 13 FNPAGL---RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVIS 69
NPA + +L ++DD + + L +C + VT C + L + R++ +D+V+
Sbjct: 1 MNPAAVGLPSILAIEDDPVLGAYVHEQLGRCGFRVTWCQNGQQGLQMARDQS--FDVVLM 58
Query: 70 DVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
D+ +P MDG +L H+ +PVI+MS G + + G + GA DYL KP M ELR
Sbjct: 59 DILLPGMDGLSVLTHLRRSHSIPVILMSALGAEADRISGFRLGADDYLPKPFSMAELRVR 118
Query: 130 WQHVFRK 136
+ + R+
Sbjct: 119 IEAILRR 125
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNM-PDM 76
+RVL+V+ D + +++ +L+ C Y+V A + L++ + D+V+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 77 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
G LL + + D+PVIMMS V+ + +GA ++L KPIR EL+N+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 134 FRK 136
+R+
Sbjct: 158 WRR 160
>gi|260777772|ref|ZP_05886665.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605785|gb|EEX32070.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
Length = 250
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
+L+V+DD + L +L+ Y+VT +AL+ L++ +D++I D+N+P++DGF
Sbjct: 27 ILLVEDDRHLNQQLTSLLQDSRYQVTNLDCGAEALNCLKQ--SNFDLIILDINLPEVDGF 84
Query: 80 KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIH 139
LL + + PVIM++ G ++G+++GA DY+ KP E+ + + R+ H
Sbjct: 85 GLLNFIRFHSNTPVIMLTAYGAEEHRIRGLRYGADDYISKPCNFTEVSLRIEAILRRTGH 144
>gi|315604878|ref|ZP_07879936.1| DNA-binding response regulator [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313417|gb|EFU61476.1| DNA-binding response regulator [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 227
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
R+LVVDDDLA +++ +L+ + V CG AL+ +E D+V+ DV +P MDG
Sbjct: 4 RILVVDDDLALAEMIGIVLQNEGFRVVFCGDGSQALAQFQEHHP--DLVLLDVMLPGMDG 61
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
F + + D+P++M++ +TS V+ G++ GA DY+ KP + KEL
Sbjct: 62 FDVCRAIRHVSDVPIVMLTARSDTSDVVTGLEAGADDYVPKPFKPKEL 109
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 43/61 (70%)
Query: 197 STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 256
+ KK R+ WS +LH +F+ A+ Q+G PK IL LMNV LTRENVASHLQKYR+ L
Sbjct: 1 APKKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLK 60
Query: 257 R 257
R
Sbjct: 61 R 61
>gi|222056452|ref|YP_002538814.1| Fis family transcriptional regulator [Geobacter daltonii FRC-32]
gi|221565741|gb|ACM21713.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter daltonii FRC-32]
Length = 457
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 12/141 (8%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
++VVDD+ + + L +L++ Y V C A ALSLL+ G+D+VISDVNMP ++G
Sbjct: 5 IMVVDDEQSMREFLVILLEREGYAVQQCESAACALSLLQ--SSGFDLVISDVNMPGLNGM 62
Query: 80 KLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF---- 134
+LLE + + V+M++ + ++ ++ GA DY+ KP +++E++ + ++
Sbjct: 63 ELLERIKSTTPETAVLMITAYTTAEQAVEAMKLGAYDYIAKPFKVEEVKVLVKNALEKSS 122
Query: 135 -----RKKIHEVRDIENIEGF 150
R+ HEV+++ G
Sbjct: 123 LQKENRRLKHEVQELYGFSGL 143
>gi|410616337|ref|ZP_11327329.1| transcriptional regulatory protein zraR [Glaciecola polaris LMG
21857]
gi|410164046|dbj|GAC31467.1| transcriptional regulatory protein zraR [Glaciecola polaris LMG
21857]
Length = 449
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++L+VDDD + L+++ L+ Y V + +DAL L+ + +D+V+SD+ MP +DG
Sbjct: 11 QILLVDDDESLLRLMAIRLEGEGYSVQSAEGGKDALRLMNTQN--FDVVLSDLRMPGLDG 68
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
L E + L DLPVI+M+ G ++ Q G +L KPI ELR++
Sbjct: 69 LSLFEEIMSLGKDLPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHTELRDL 120
>gi|386826644|ref|ZP_10113751.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
gi|386427528|gb|EIJ41356.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
Length = 691
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 18/152 (11%)
Query: 7 SPRNDTFNP-------AGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
SP +T N +G+ +LV+DDD+ ++L+ L + +Y V T + L L ++
Sbjct: 409 SPAKETLNDIQHLLVNSGI-ILVIDDDILVRELLQSYLTRLNYSVATAENGEEGLKLAKK 467
Query: 60 RKDGYDIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDY 116
+ D ++ DV MPD+DG+ +L + L ++PV M+S++ E S KGV GA DY
Sbjct: 468 LRP--DAILLDVKMPDLDGWNVLSALKSDNLLAEIPVFMISMENEQS---KGVALGATDY 522
Query: 117 LLKPIRMKELRNIWQ--HVFRKKIHEVRDIEN 146
L+KP+ +++ NI Q H+ + H V +E+
Sbjct: 523 LMKPVGRQQVINILQKYHIGEQGSHAVMIVED 554
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDGF 79
VLVVDD L L L ++L++ + V + AL++ +E D+++ DV MP+ DG+
Sbjct: 8 VLVVDDTLTNLAFLNQVLQQEGFTVLLAKNGKSALNIAQETPP--DLILLDVTMPEWDGY 65
Query: 80 ---KLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKE-LRNIWQHVFR 135
+ L+ + +PV+ +S + ++ + G DY+ KP + KE L + HV
Sbjct: 66 ETCRRLKAIPRLATIPVLFLSALTQAENRLQAFEVGGVDYVNKPFQEKELLARVRTHVAL 125
Query: 136 KKIHE 140
++ E
Sbjct: 126 HRLQE 130
>gi|329926298|ref|ZP_08280817.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328939333|gb|EGG35690.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1050
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+R+L VDDD L+IL +L Y + A +AL LL + +D++I+DV MP+M
Sbjct: 719 VRILAVDDDPVNLRILAGILSAEPYNLNVVASAAEALELLGSQP--WDLLIADVMMPEMS 776
Query: 78 GFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
G++L V +LPV++++ GE++ V G Q GA DY+ KP+ ELR
Sbjct: 777 GYELTRTVRERFNASELPVLLLTARGESADVYAGFQSGANDYVTKPVDPVELR 829
>gi|257439473|ref|ZP_05615228.1| DNA-binding response regulator VicR [Faecalibacterium prausnitzii
A2-165]
gi|257198132|gb|EEU96416.1| response regulator receiver domain protein [Faecalibacterium
prausnitzii A2-165]
Length = 241
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 9 RNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVI 68
+N N A ++L++DDD ++++ ++ E C ++ L L+E++ Y +V+
Sbjct: 4 QNKERNYAMNKILIIDDDRELCALIKRSVQSEHIEADFCNTGKEGLQKLKEQE--YQLVV 61
Query: 69 SDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
DV MP MDGF+ LE + E LP++M + ++ ++G++ GA DYL KP M EL
Sbjct: 62 LDVMMPGMDGFETLEEIRKENSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDEL 119
>gi|284929471|ref|YP_003421993.1| winged helix family two component transcriptional regulator
[cyanobacterium UCYN-A]
gi|284809915|gb|ADB95612.1| two component transcriptional regulator, winged helix family
[cyanobacterium UCYN-A]
Length = 243
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
++LVVDD+ + +ILE L Y+V T +AL + + D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFYDSVP--DLVVLDVMMPKLDG 64
Query: 79 FKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRK 136
+ + + + E D+P+IM++ G+ + + G++ GA DY++KP KEL + V R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|318040600|ref|ZP_07972556.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 253
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 5 FSSPRNDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGY 64
++ T + A +LVVDD+ + +ILE L Y+V T ++AL R R D
Sbjct: 1 MTASTGTTASAAKETILVVDDEASIRRILETRLSMIGYQVVTACDGQEALEAFR-RTDP- 58
Query: 65 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 124
D+V+ DV MP +DG+ + + + E D+P++M++ G+ + + G++ GA DY++KP K
Sbjct: 59 DLVVLDVMMPKLDGYGVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPK 118
Query: 125 ELRNIWQHVFRK 136
EL + V R+
Sbjct: 119 ELEARIRCVLRR 130
>gi|322417765|ref|YP_004196988.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M18]
gi|320124152|gb|ADW11712.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M18]
Length = 357
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMDG 78
RV++VDDD L+ + +L +EV C DAL LLR+ D+V++DVNMP M G
Sbjct: 8 RVILVDDDPYVLESVALLLSVSGFEVHPCTNGMDALGLLRQSPP--DVVLTDVNMPQMSG 65
Query: 79 FKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 122
LLE + + D+PVI+M+ E + ++ GA D+++KP +
Sbjct: 66 IDLLEQIHDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 199 KKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 257
K+AR+VW+ LH +FV V ++G D PK I+ +MNV LTRENVASHLQKYR+ L R
Sbjct: 74 KRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKR 132
>gi|294675080|ref|YP_003575696.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
gi|294473361|gb|ADE82750.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
Length = 1284
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 19 RVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLL-RERKDGYDIVISDVNMPDMD 77
+VL+VDDD + + + L C Y +T R+AL LL E + +D+V+SDV MP+MD
Sbjct: 1026 QVLIVDDDEEIGRYIAQELG-CYYHITPVTSGREALRLLLSESEKQFDLVVSDVMMPEMD 1084
Query: 78 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 129
GF LL + M+L PV+M++ + ++G++ GA +L KP M EL +
Sbjct: 1085 GFTLLRMIKTNMNLNHIPVVMLTSKAAVANRLEGLEKGADAFLAKPFDMDELHMV 1139
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 21/139 (15%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG---------------- 63
VL VDD L K++E +LK SY+VTT AL LL R +G
Sbjct: 12 VLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQE 71
Query: 64 --YDIVISDVNMPDMDGFKLLEHVGLE---MDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
+++I+D MP M G+ LL+ V D+PV++MS + +R+ + ++ GA ++ L
Sbjct: 72 IDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFL 131
Query: 119 KPIRMKELRNIWQHVFRKK 137
KP+++ +++ + H+ ++K
Sbjct: 132 KPVKLADMKKLKSHLLKRK 150
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+ VL+ +D L +L+ C+Y+V C A L + ++ +D+++ D+ +P+M
Sbjct: 14 INVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEMT 73
Query: 78 GFKLLEHVGL---EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
G +LL+ + D+PVIMMS D ET V + GA DY++KP+ K+L+ + Q
Sbjct: 74 GLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGL-QTFV 132
Query: 135 RKKIHEVRDIENIEGFE------------SIHMTRSGSDQSVDGPLLTGEDLTSVRKRKD 182
+KK +N +G+ S+ + R +DQ + + + ++RK+
Sbjct: 133 KKKPKPRNSNQNEKGYYTIVRNIGKGASGSVELVRKSTDQELYAMKVIPTFFMNEQERKN 192
Query: 183 AENR 186
AEN
Sbjct: 193 AENE 196
>gi|398894911|ref|ZP_10646919.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM55]
gi|398181654|gb|EJM69207.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM55]
Length = 461
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 17 GLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDM 76
G++VL+V+DD A + L L ++ G A DAL+ + + + +V+SDVNMP M
Sbjct: 2 GIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEDALAAVG--GEAFSLVVSDVNMPGM 59
Query: 77 DGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 126
DG +LL + + LPV++M+ G R + ++ GA DYL+KP K L
Sbjct: 60 DGHQLLAMLRVRQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKAL 110
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 20 VLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDG---------------- 63
VL VDD L K++E++LK SY+VTT AL L ++D
Sbjct: 13 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPFVSPNNHQE 72
Query: 64 --YDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLL 118
+++I+D MP M G+ LL+ V L PV++MS + SR+ + ++ GA ++ L
Sbjct: 73 VEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 132
Query: 119 KPIRMKELRNIWQHVFRKKI 138
KP+R+ +L + H+ + KI
Sbjct: 133 KPVRLSDLNRLKPHMMKTKI 152
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 191 DCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 250
D G + K+ R+VW+ LH+KF AV ++G DK PK I+ MN+ LTRENVASHLQK
Sbjct: 383 DDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQK 442
Query: 251 YRL 253
YR+
Sbjct: 443 YRM 445
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 2 ENGFSSPR--NDTFNPAGLRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRE 59
E + PR + + +RVL+V+ D + +++ +L+ C Y+V A + L++
Sbjct: 20 EEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQD 79
Query: 60 RKDGYDIVISDVNM-PDMDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACD 115
+ D+V+++V M + G LL + + D+PVIMMS V+ + +GA D
Sbjct: 80 MQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAD 139
Query: 116 YLLKPIRMKELRNIWQHVFRK 136
+L KPIR EL+N+W HV+R+
Sbjct: 140 FLAKPIRKNELKNLWAHVWRR 160
>gi|152997453|ref|YP_001342288.1| two component sigma-54-specific Fis family transcriptional
regulator [Marinomonas sp. MWYL1]
gi|150838377|gb|ABR72353.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas sp. MWYL1]
Length = 448
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 18 LRVLVVDDDLAWLKILEKMLKKCSYEVTTCGLARDALSLLRERKDGYDIVISDVNMPDMD 77
+++L+V+DD + LE L SY+ + +A+ L+ +D+VISDVN+P MD
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKIVYSSEEAVVALKHSL--FDMVISDVNLPGMD 61
Query: 78 GFKLLEHV-GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRN 128
G+ LL HV +LP+++M+ G+ + ++ ++ GA DYLLKP + +EL N
Sbjct: 62 GYGLLHHVIDTYPELPMMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,560,170,824
Number of Sequences: 23463169
Number of extensions: 409541981
Number of successful extensions: 1186019
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19512
Number of HSP's successfully gapped in prelim test: 81280
Number of HSP's that attempted gapping in prelim test: 1065122
Number of HSP's gapped (non-prelim): 109695
length of query: 584
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 436
effective length of database: 8,886,646,355
effective search space: 3874577810780
effective search space used: 3874577810780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)