Query 007944
Match_columns 584
No_of_seqs 499 out of 1954
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 14:20:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 9.3E-32 3.2E-36 270.5 10.3 235 11-299 16-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 5.3E-31 1.8E-35 268.5 13.8 240 11-304 17-268 (279)
3 3htm_A Speckle-type POZ protei 99.9 2E-23 7E-28 196.5 12.5 152 7-166 15-169 (172)
4 4eoz_A Speckle-type POZ protei 99.9 1.5E-22 5.2E-27 185.3 9.2 131 4-137 3-136 (145)
5 2if5_A Zinc finger and BTB dom 99.9 1.1E-21 3.7E-26 175.0 12.8 109 11-127 10-119 (120)
6 2vkp_A BTB/POZ domain-containi 99.9 2.5E-21 8.5E-26 169.4 11.8 101 20-129 2-107 (109)
7 1r29_A B-cell lymphoma 6 prote 99.8 5.1E-21 1.7E-25 172.4 13.4 108 12-128 15-124 (127)
8 3b84_A Zinc finger and BTB dom 99.8 3.6E-21 1.2E-25 172.0 10.3 104 15-129 13-116 (119)
9 2vpk_A Myoneurin; transcriptio 99.8 1.1E-20 3.6E-25 167.7 12.6 105 13-128 9-115 (116)
10 1buo_A POZ domain, protein (pr 99.8 1.2E-20 4.1E-25 168.9 13.0 106 12-129 14-119 (121)
11 2ppi_A Gigaxonin; BTB domain, 99.8 5.8E-21 2E-25 176.7 11.0 108 12-127 33-143 (144)
12 3hqi_A Speckle-type POZ protei 99.8 7.6E-21 2.6E-25 196.1 12.0 144 9-165 157-308 (312)
13 2yy9_A Zinc finger and BTB dom 99.8 8.4E-21 2.9E-25 173.5 10.2 105 13-129 12-117 (135)
14 2z8h_A Transcription regulator 99.8 2E-20 6.7E-25 171.4 12.1 109 11-129 21-131 (138)
15 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.1E-20 3.8E-25 168.8 10.0 102 15-128 16-117 (119)
16 3ohu_A Transcription regulator 99.8 9.7E-21 3.3E-25 170.1 9.3 103 12-118 18-124 (125)
17 2ihc_A Transcription regulator 99.8 1.3E-20 4.4E-25 169.6 9.1 107 10-120 13-123 (124)
18 3ga1_A Nucleus accumbens-assoc 99.8 3.2E-20 1.1E-24 167.9 10.3 103 13-120 20-125 (129)
19 3m5b_A Zinc finger and BTB dom 99.8 1.5E-19 5.2E-24 162.2 9.7 93 20-128 24-116 (119)
20 3fkc_A Transcriptional regulat 99.8 6.8E-19 2.3E-23 156.8 11.5 94 13-112 18-112 (116)
21 2ast_A S-phase kinase-associat 99.3 5.8E-12 2E-16 118.4 10.5 92 29-129 3-124 (159)
22 4ajy_C Transcription elongatio 99.2 6E-11 2.1E-15 102.5 9.8 79 29-110 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 2.5E-09 8.5E-14 98.6 9.4 89 29-129 4-119 (141)
24 2p1m_A SKP1-like protein 1A; F 98.6 7.5E-09 2.6E-13 97.3 1.2 90 29-129 6-123 (160)
25 1hv2_A Elongin C, ELC1; protei 98.4 8.5E-07 2.9E-11 76.9 9.6 78 29-110 6-99 (99)
26 2fnj_C Transcription elongatio 98.4 6E-07 2E-11 77.4 8.2 79 29-110 3-96 (96)
27 2eqx_A Kelch repeat and BTB do 98.2 5.6E-07 1.9E-11 78.5 3.8 76 126-227 10-85 (105)
28 3v7d_A Suppressor of kinetocho 98.1 1.2E-05 4.1E-10 76.1 11.3 93 28-129 8-131 (169)
29 1vcb_B Protein (elongin C); tu 97.9 2.4E-05 8.1E-10 69.3 8.0 79 29-110 19-112 (112)
30 3drz_A BTB/POZ domain-containi 97.8 0.00016 5.5E-09 63.2 10.9 90 28-126 7-103 (107)
31 3kvt_A Potassium channel prote 96.4 0.0037 1.3E-07 55.4 5.6 81 29-112 7-91 (115)
32 3drx_A BTB/POZ domain-containi 95.9 0.014 4.9E-07 56.5 7.4 91 29-128 14-111 (202)
33 1s1g_A Potassium voltage-gated 95.1 0.089 3E-06 47.0 9.1 79 28-112 14-98 (124)
34 1t1d_A Protein (potassium chan 94.6 0.065 2.2E-06 46.1 6.7 81 29-112 3-88 (100)
35 2nz0_B Potassium voltage-gated 94.6 0.11 3.8E-06 47.4 8.5 80 27-112 35-120 (140)
36 1nn7_A Potassium channel KV4.2 94.1 0.094 3.2E-06 45.4 6.6 78 29-112 2-85 (105)
37 2r9r_B Paddle chimera voltage 73.5 6.1 0.00021 43.2 7.6 83 28-113 53-140 (514)
38 2yy0_A C-MYC-binding protein; 54.6 16 0.00054 27.6 4.4 30 490-519 20-49 (53)
39 1vjh_A BET V I allergen family 46.9 14 0.00047 32.3 3.5 33 377-420 90-122 (122)
40 2yy0_A C-MYC-binding protein; 41.5 19 0.00066 27.1 3.0 25 495-519 18-42 (53)
41 1deb_A APC protein, adenomatou 40.7 13 0.00046 27.7 1.9 30 492-521 13-42 (54)
42 1pd7_B MAD1; PAH2, SIN3, eukar 39.4 9.3 0.00032 24.6 0.8 17 96-112 3-19 (26)
43 2eqx_A Kelch repeat and BTB do 31.3 45 0.0015 27.9 4.1 34 89-128 4-37 (105)
44 1a92_A Delta antigen; leucine 29.3 71 0.0024 23.6 4.2 31 489-519 7-37 (50)
45 3b0b_C CENP-X, centromere prot 21.7 48 0.0017 27.2 2.4 42 324-378 7-48 (81)
46 1go4_E MAD1 (mitotic arrest de 21.1 90 0.0031 26.6 4.0 31 489-519 12-42 (100)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=9.3e-32 Score=270.55 Aligned_cols=235 Identities=15% Similarity=0.216 Sum_probs=178.0
Q ss_pred hHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCc--cCCcceEEeCCCCCCHHHHHHHHHHhh
Q 007944 11 SAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESK--EADLTRINLSNIPGGPEMFEKAAKFCY 87 (584)
Q Consensus 11 ~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~--Es~~~~I~L~di~gg~~aFe~vl~F~Y 87 (584)
..+.+....++.++.+|||+|.|||+.|+|||.||+++|+||++||. ++. |+....|.|++++ +++|+.+++|+|
T Consensus 16 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Y 93 (256)
T 3hve_A 16 ARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIF 93 (256)
T ss_dssp HHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhcc
Confidence 34555566788999999999999999999999999999999999998 555 6777899999999 999999999999
Q ss_pred cccccCChhhHHHHHHHHHHccCch--hhhhHhHHHHHHHHHHHHHhhhhhhhHHhhcCHHHHHHHhHHhHHHHHHHHhh
Q 007944 88 GVNFEITVHNVAALRCAAEFLQMTD--KYCENNLAGRTEDFLSQVALSSLSGAVVVLKSCEALLPLAEDLLIVQRCIDVA 165 (584)
Q Consensus 88 tg~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~~~~e~~ln~~~~~~~adsi~vL~sc~~L~~~Ae~~~I~~rc~d~i 165 (584)
||++.++.+|+..++.+|++|+|++ +.|+.+|.... +.-||+.+..+++. ++|..|...|.+| |.++|.++.
T Consensus 94 t~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l-~~~n~~~i~~~A~~----~~~~~L~~~~~~~-i~~~f~~v~ 167 (256)
T 3hve_A 94 SGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI-AAENCIGIRDFALH----YCLHHVHYLATEY-LETHFRDVS 167 (256)
T ss_dssp HSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC-CSSTTHHHHHHHHH----TTCHHHHHHHHHH-HHHHHHHHT
T ss_pred CCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC-CHhhHHHHHHHHHH----cCcHHHHHHHHHH-HHHHHHHHh
Confidence 9999999999999999999999999 55555555544 44468888888886 8999999999999 999999876
Q ss_pred hhhhhhccCCCCCCCCCCcccccccCCHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCccc
Q 007944 166 TAKACYEANFPCRTPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRDHSAGNGTKSSDAQS 245 (584)
Q Consensus 166 a~ka~~~~~~~~~~~~dWW~EDl~~L~~d~~~rvI~a~~~~~~~ee~v~~al~~ya~k~l~~~~r~~~~~~~~~~~~~~~ 245 (584)
. .++|..|+.+.+..+|+.......+|+.|+++++.|+++..+. |
T Consensus 168 ~------------------~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~--R--------------- 212 (256)
T 3hve_A 168 S------------------TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEI--R--------------- 212 (256)
T ss_dssp T------------------CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CC--S---------------
T ss_pred C------------------CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHH--H---------------
Confidence 4 4899999999999999988877778999999998887554332 2
Q ss_pred cchHHHHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhhhhccCC-hhhHHHHHH
Q 007944 246 TNSQVRYQQRELLESIVSLMPSEKAAFPINFLCCLLRSAIFLKAS-TSCKNELEK 299 (584)
Q Consensus 246 ~~~~~~~~~r~lLE~Iv~LLP~~k~~vs~~fL~~lLr~a~~l~as-~~Cr~~LE~ 299 (584)
..+...|++.|+- +.+|+.||.+.++...++..+ +.|+..|++
T Consensus 213 -----~~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 213 -----KVHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp -----TTTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred -----HHHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 1345678999863 458899999999999999999 789999875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.97 E-value=5.3e-31 Score=268.46 Aligned_cols=240 Identities=16% Similarity=0.246 Sum_probs=195.4
Q ss_pred hHHHhhhHHHhhcCCCccEEEEEC---CeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeC------CCCCCHHHHH
Q 007944 11 SAKERTGQWVFSQEIPTDIVVAVG---EANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLS------NIPGGPEMFE 80 (584)
Q Consensus 11 ~~~~r~~~w~~~~~~~sDV~I~V~---g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~------di~gg~~aFe 80 (584)
+.+.+....++.+|.+|||+|.|| |+.|+|||.||+++|+||++||+ +++|+....|.|+ +++ +++|+
T Consensus 17 ~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~ 94 (279)
T 3i3n_A 17 SELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVE 94 (279)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHH
Confidence 334455566888999999999998 99999999999999999999999 8889998999998 777 99999
Q ss_pred HHHHHhhcccccCChhhHHHHHHHHHHccCch--hhhhHhHHHHHHHHHHHHHhhhhhhhHHhhcCHHHHHHHhHHhHHH
Q 007944 81 KAAKFCYGVNFEITVHNVAALRCAAEFLQMTD--KYCENNLAGRTEDFLSQVALSSLSGAVVVLKSCEALLPLAEDLLIV 158 (584)
Q Consensus 81 ~vl~F~Ytg~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~~~~e~~ln~~~~~~~adsi~vL~sc~~L~~~Ae~~~I~ 158 (584)
.+++|+|||++.++.+|+..|+.+|++|+|+. +.|+.+|.... +.-||+.+..+++. ++|..|...|.+| |.
T Consensus 95 ~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l-~~~n~~~i~~~A~~----~~~~~L~~~~~~~-i~ 168 (279)
T 3i3n_A 95 AVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL-HLSNCVAIHSLAHM----YTLSQLALKAADM-IR 168 (279)
T ss_dssp HHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CTTTHHHHHHHHHH----TTCHHHHHHHHHH-HH
T ss_pred HHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC-CcchHHHHHHHHHH----cCcHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999 66666666655 55578888888886 8999999999999 99
Q ss_pred HHHHHhhhhhhhhccCCCCCCCCCCcccccccCCHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHhhhhhhcccCCCCCC
Q 007944 159 QRCIDVATAKACYEANFPCRTPPNWWTEELSIIDIEFFSRIIAAMKKRGAKALTIASALITYTERSLRDLVRDHSAGNGT 238 (584)
Q Consensus 159 ~rc~d~ia~ka~~~~~~~~~~~~dWW~EDl~~L~~d~~~rvI~a~~~~~~~ee~v~~al~~ya~k~l~~~~r~~~~~~~~ 238 (584)
++|.+++. .++|..|+.+.+..+|++......+|+.|+++++.|+++..+. |
T Consensus 169 ~~f~~v~~------------------~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~--r-------- 220 (279)
T 3i3n_A 169 RNFHKVIQ------------------DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEE--R-------- 220 (279)
T ss_dssp HTHHHHTT------------------SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHH--H--------
T ss_pred HHHHHHhc------------------CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHH--H--------
Confidence 99988764 4899999999999999988777778999999999999876543 2
Q ss_pred CCCCccccchHHHHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhhhhccCChhhHHHHHHHHHhh
Q 007944 239 KSSDAQSTNSQVRYQQRELLESIVSLMPSEKAAFPINFLCCLLRSAIFLKASTSCKNELEKRVSAI 304 (584)
Q Consensus 239 ~~~~~~~~~~~~~~~~r~lLE~Iv~LLP~~k~~vs~~fL~~lLr~a~~l~as~~Cr~~LE~rig~q 304 (584)
......|++.|+- +.+|+.+|...++....+..++.|+..|.+..--+
T Consensus 221 ------------~~~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~ 268 (279)
T 3i3n_A 221 ------------ERYFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCVKLVADAVERH 268 (279)
T ss_dssp ------------TTTHHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhc
Confidence 1223445555431 67999999999999999999999999997765433
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=196.46 Aligned_cols=152 Identities=21% Similarity=0.252 Sum_probs=121.7
Q ss_pred CCCChHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHH
Q 007944 7 KRFSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKF 85 (584)
Q Consensus 7 ~~~s~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F 85 (584)
..|++.+......++.++.+|||+|.|+|+.|++||.+|+++|+||++||. ++.|+....|.|++++ +++|+.+++|
T Consensus 15 ~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~ 92 (172)
T 3htm_A 15 KVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCF 92 (172)
T ss_dssp CCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHH
Confidence 344555666667788899999999999999999999999999999999999 7888888999999999 9999999999
Q ss_pred hhcccccCChhhHHHHHHHHHHccCch--hhhhHhHHHHHHHHHHHHHhhhhhhhHHhhcCHHHHHHHhHHhHHHHHHHH
Q 007944 86 CYGVNFEITVHNVAALRCAAEFLQMTD--KYCENNLAGRTEDFLSQVALSSLSGAVVVLKSCEALLPLAEDLLIVQRCID 163 (584)
Q Consensus 86 ~Ytg~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~~~~e~~ln~~~~~~~adsi~vL~sc~~L~~~Ae~~~I~~rc~d 163 (584)
+|||++.++.+|+..|+.+|++|+|+. +.|+.+|.... +.-|++.+..+++. +++..|...|.+| |.+++.+
T Consensus 93 ~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l-~~~n~~~~~~~A~~----~~~~~L~~~~~~~-i~~~~~~ 166 (172)
T 3htm_A 93 IYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL-SVENAAEILILADL----HSADQLKTQAVDF-INYHATD 166 (172)
T ss_dssp HHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CTTTHHHHHHHHHH----TTCHHHHHHHHHH-HHHTC--
T ss_pred HhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC-CHHHHHHHHHHHHH----hCcHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999 34444444332 22345556666664 7777777777777 7777666
Q ss_pred hhh
Q 007944 164 VAT 166 (584)
Q Consensus 164 ~ia 166 (584)
++.
T Consensus 167 v~~ 169 (172)
T 3htm_A 167 VLE 169 (172)
T ss_dssp ---
T ss_pred HHc
Confidence 553
No 4
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=1.5e-22 Score=185.27 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=99.4
Q ss_pred CCCCCCChHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHH
Q 007944 4 PLNKRFSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKA 82 (584)
Q Consensus 4 ~~~~~~s~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~v 82 (584)
|....|++.+......++.++.+|||+|.|+|+.|++||.+|+++|+||++||. ++.|+....|.+++++ +++|+.+
T Consensus 3 ~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~ 80 (145)
T 4eoz_A 3 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEM 80 (145)
T ss_dssp --CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHH
T ss_pred CcccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHH
Confidence 344455566666667788899999999999999999999999999999999999 7788878899999999 9999999
Q ss_pred HHHhhcccccCChhhHHHHHHHHHHccCch--hhhhHhHHHHHHHHHHHHHhhhhhh
Q 007944 83 AKFCYGVNFEITVHNVAALRCAAEFLQMTD--KYCENNLAGRTEDFLSQVALSSLSG 137 (584)
Q Consensus 83 l~F~Ytg~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~~~~e~~ln~~~~~~~ad 137 (584)
++|+|||++.++.+|+..++.+|++|+|+. +.|+.+|.... +.-|++.+..+++
T Consensus 81 l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l-~~~n~~~~l~~A~ 136 (145)
T 4eoz_A 81 MCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL-SVENAAEILILAD 136 (145)
T ss_dssp HHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC-------------------
T ss_pred HHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHH
Confidence 999999999999999999999999999999 34444444333 3333444444443
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.86 E-value=1.1e-21 Score=174.99 Aligned_cols=109 Identities=22% Similarity=0.316 Sum_probs=95.8
Q ss_pred hHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHHhhcc
Q 007944 11 SAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKFCYGV 89 (584)
Q Consensus 11 ~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg 89 (584)
+.+.+....++.++.+|||+|.|+|+.|++||.||+++|+||++||. ++.|+....|.|++++ +++|+.+++|+|||
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~ 87 (120)
T 2if5_A 10 SDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTA 87 (120)
T ss_dssp HHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCC
Confidence 33444455578889999999999999999999999999999999999 7888888899999999 99999999999999
Q ss_pred cccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHH
Q 007944 90 NFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFL 127 (584)
Q Consensus 90 ~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~l 127 (584)
++.++.+|+..|+.+|++|+|+. |+..|++|+
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L 119 (120)
T 2if5_A 88 TLTVSTANVGDILSAARLLEIPA------VSHVCADLL 119 (120)
T ss_dssp CCCCCGGGHHHHHHHHHHTTCHH------HHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHh
Confidence 99999999999999999999999 888888776
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.85 E-value=2.5e-21 Score=169.38 Aligned_cols=101 Identities=24% Similarity=0.414 Sum_probs=89.9
Q ss_pred HhhcCCCccEEEEECC----eEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCC
Q 007944 20 VFSQEIPTDIVVAVGE----ANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEIT 94 (584)
Q Consensus 20 ~~~~~~~sDV~I~V~g----~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it 94 (584)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||. ++.|+. ..|.|++++ +++|+.+++|+|||++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 4678999999999998 8999999999999999999999 788877 899999999 9999999999999999999
Q ss_pred hhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 95 VHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 95 ~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
.+|+..|+.+|++|+|+. |+..|++|+..
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~ 107 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLET 107 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHh
Confidence 999999999999999999 77777777654
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.85 E-value=5.1e-21 Score=172.43 Aligned_cols=108 Identities=28% Similarity=0.403 Sum_probs=98.2
Q ss_pred HHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEe-CCCCCCHHHHHHHHHHhhcc
Q 007944 12 AKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINL-SNIPGGPEMFEKAAKFCYGV 89 (584)
Q Consensus 12 ~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L-~di~gg~~aFe~vl~F~Ytg 89 (584)
.+......++.++.+|||+|.|+|+.|++||.||+++|+||++||. ++.| ....|.| ++++ +++|+.+++|+|||
T Consensus 15 ~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg 91 (127)
T 1r29_A 15 DVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTS 91 (127)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCC
Confidence 3444455688899999999999999999999999999999999999 6777 6788999 9999 99999999999999
Q ss_pred cccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 90 NFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 90 ~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
++.++.+|+.+|+.+|++|+|+. |+..|+.|+.
T Consensus 92 ~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~ 124 (127)
T 1r29_A 92 RLNLREGNIMAVMATAMYLQMEH------VVDTCRKFIK 124 (127)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHH
Confidence 99999999999999999999999 8888877765
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.84 E-value=3.6e-21 Score=171.99 Aligned_cols=104 Identities=18% Similarity=0.155 Sum_probs=92.4
Q ss_pred hhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCC
Q 007944 15 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEIT 94 (584)
Q Consensus 15 r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it 94 (584)
.....++.++.+|||+|.|+|+.|++||.||+++|+||++||.+.. ...|.|++++ +++|+.+++|+|||++.++
T Consensus 13 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~ 87 (119)
T 3b84_A 13 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 87 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 3444578889999999999999999999999999999999998322 4679999999 9999999999999999999
Q ss_pred hhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 95 VHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 95 ~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
.+|+.+|+.+|++|+|++ |+..|++|+..
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (119)
T 3b84_A 88 SGNRDQVLLAARELRVPE------AVELCQSFKPK 116 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCC--
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 999999999999999999 77777777654
No 9
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.1e-20 Score=167.72 Aligned_cols=105 Identities=17% Similarity=0.274 Sum_probs=93.7
Q ss_pred HHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeC--CCCCCHHHHHHHHHHhhccc
Q 007944 13 KERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLS--NIPGGPEMFEKAAKFCYGVN 90 (584)
Q Consensus 13 ~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~--di~gg~~aFe~vl~F~Ytg~ 90 (584)
+.+....++.++.+|||+|.|+|+.|++||.||+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|||+
T Consensus 9 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~ 83 (116)
T 2vpk_A 9 LLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGT 83 (116)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCC
Confidence 34445567888999999999999999999999999999999999843 34568888 999 999999999999999
Q ss_pred ccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 91 FEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 91 i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
+.++.+|+..|+.+|++|+|+. |+..|++|+.
T Consensus 84 ~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~ 115 (116)
T 2vpk_A 84 LNLDSWNVKEIHQAADYLKVEE------VVTKCKIKME 115 (116)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999999999999 8888877764
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.84 E-value=1.2e-20 Score=168.91 Aligned_cols=106 Identities=18% Similarity=0.287 Sum_probs=95.5
Q ss_pred HHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhcccc
Q 007944 12 AKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNF 91 (584)
Q Consensus 12 ~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i 91 (584)
.+.+....++.++.+|||+|.|+|+.|++||.||+++|+||++||.+ ....|.|++++ +++|+.+++|+|||++
T Consensus 14 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~ 87 (121)
T 1buo_A 14 GLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHR----NSQHYTLDFLS--PKTFQQILEYAYTATL 87 (121)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTS----CCSEEEECSSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcC----CCcEEEeCCCC--HHHHHHHHHhhcCCCc
Confidence 34455556788899999999999999999999999999999999974 24579999999 9999999999999999
Q ss_pred cCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 92 EITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 92 ~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
.++.+|+.+++.+|++|+|+. |+..|++|+..
T Consensus 88 ~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 119 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEILEIEY------LEEQCLKMLET 119 (121)
T ss_dssp CCCGGGHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCHH------HHHHHHHHHHH
Confidence 999999999999999999999 88888877765
No 11
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.84 E-value=5.8e-21 Score=176.71 Aligned_cols=108 Identities=19% Similarity=0.265 Sum_probs=93.3
Q ss_pred HHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCcc--CCcceEEeCCCCCCHHHHHHHHHHhhc
Q 007944 12 AKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKE--ADLTRINLSNIPGGPEMFEKAAKFCYG 88 (584)
Q Consensus 12 ~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~E--s~~~~I~L~di~gg~~aFe~vl~F~Yt 88 (584)
.+......++.++.+|||+|.|+|+.|+|||.||+++|+||++||. ++.+ +....|.|++++ +++|+.+++|+||
T Consensus 33 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYt 110 (144)
T 2ppi_A 33 RLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFS 110 (144)
T ss_dssp HHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhC
Confidence 3444455678899999999999999999999999999999999998 6654 667889999999 9999999999999
Q ss_pred ccccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHH
Q 007944 89 VNFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFL 127 (584)
Q Consensus 89 g~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~l 127 (584)
|++.++.+|+..|+.+|++|+|+. |+..|++|+
T Consensus 111 g~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 143 (144)
T 2ppi_A 111 GQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFL 143 (144)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHh
Confidence 999999999999999999999999 777776664
No 12
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.83 E-value=7.6e-21 Score=196.10 Aligned_cols=144 Identities=22% Similarity=0.241 Sum_probs=112.4
Q ss_pred CChHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHHhh
Q 007944 9 FSSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKFCY 87 (584)
Q Consensus 9 ~s~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F~Y 87 (584)
|++.+.+....++.++.+|||+|.|+|+.|+|||.+|+++|+||++||. ++.|+...+|.|+|++ +++|+.+++|+|
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iY 234 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIY 234 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhc
Confidence 4445666666678889999999999999999999999999999999999 7889888999999999 999999999999
Q ss_pred cccccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHH-------HHHhhhhhhhHHhhcCHHHHHHHhHHhHHHHH
Q 007944 88 GVNFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLS-------QVALSSLSGAVVVLKSCEALLPLAEDLLIVQR 160 (584)
Q Consensus 88 tg~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln-------~~~~~~~adsi~vL~sc~~L~~~Ae~~~I~~r 160 (584)
|+++.++.+|+..|+.+|++|+|+. |+..|+.++. +..+..+++. ++|..|...|.+| |..+
T Consensus 235 t~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~~~n~~~~l~~A~~----~~~~~L~~~~~~~-i~~~ 303 (312)
T 3hqi_A 235 TGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNLSVENAAEILILADL----HSADQLKTQAVDF-INYH 303 (312)
T ss_dssp HSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCCTTTHHHHHHHHHH----TTCHHHHHHHHHH-HHHT
T ss_pred CCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccCCHHHHHHHHHHHHH----hCCHHHHHHHHHH-HHHH
Confidence 9999999999999999999999999 7777777664 3333444443 6666666666666 5555
Q ss_pred HHHhh
Q 007944 161 CIDVA 165 (584)
Q Consensus 161 c~d~i 165 (584)
+.+++
T Consensus 304 ~~~v~ 308 (312)
T 3hqi_A 304 ATDVL 308 (312)
T ss_dssp C----
T ss_pred HHHHh
Confidence 54443
No 13
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.83 E-value=8.4e-21 Score=173.53 Aligned_cols=105 Identities=18% Similarity=0.144 Sum_probs=93.1
Q ss_pred HHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHHhhcccc
Q 007944 13 KERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNF 91 (584)
Q Consensus 13 ~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i 91 (584)
+......++.++.+|||+|.|+|+.|+|||.||+++|+||++||. ++ ...|.|++++ +++|+.+++|+|||++
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~ 85 (135)
T 2yy9_A 12 VLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHL 85 (135)
T ss_dssp HHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCC
Confidence 444455688899999999999999999999999999999999998 44 4579999999 9999999999999999
Q ss_pred cCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 92 EITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 92 ~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
.++.+|+.+|+.+|++|+|+. |++.|++|+..
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~ 117 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPE------AVELCQSFQPQ 117 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHHCCC-
T ss_pred CCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 999999999999999999999 77788777654
No 14
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.83 E-value=2e-20 Score=171.42 Aligned_cols=109 Identities=20% Similarity=0.298 Sum_probs=96.8
Q ss_pred hHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeC-CCCCCHHHHHHHHHHhhc
Q 007944 11 SAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLS-NIPGGPEMFEKAAKFCYG 88 (584)
Q Consensus 11 ~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~-di~gg~~aFe~vl~F~Yt 88 (584)
+.+.+....++.++.+|||+|.|+|+.|+|||.||+++|+||++||. ++.+ ...|.++ +++ +++|+.+++|+||
T Consensus 21 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~v~--~~~~~~lL~~~Yt 96 (138)
T 2z8h_A 21 TNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA--ELTVTLPEEVT--VKGFEPLIQFAYT 96 (138)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT--TEEEECCTTSC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC--CceEEeCCCCC--HHHHHHHHHHhcC
Confidence 34555556688889999999999999999999999999999999999 5554 3478995 899 9999999999999
Q ss_pred ccccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 89 VNFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 89 g~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
|++.++.+|+..|+.+|++|+|+. |+..|++|+..
T Consensus 97 g~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 131 (138)
T 2z8h_A 97 AKLILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKF 131 (138)
T ss_dssp SCCCCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTC
T ss_pred CCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHH
Confidence 999999999999999999999999 88888887754
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.83 E-value=1.1e-20 Score=168.79 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=92.0
Q ss_pred hhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCC
Q 007944 15 RTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEIT 94 (584)
Q Consensus 15 r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it 94 (584)
+....++.++.+|||+|.|+|+.|++||.||+++|+||++||.+ ....|.+++++ +++|+.+++|+|||++.++
T Consensus 16 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~ 89 (119)
T 2q81_A 16 EQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD----QKDVVHLDISN--AAGLGQVLEFMYTAKLSLS 89 (119)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH----CCSGGGGGGCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC----CCCEEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 33445788899999999999999999999999999999999984 23468889998 9999999999999999999
Q ss_pred hhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 95 VHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 95 ~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
.+|+.+|+.+|++|+|++ |++.|++|+.
T Consensus 90 ~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 90 PENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 999999999999999999 8888877764
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=9.7e-21 Score=170.13 Aligned_cols=103 Identities=20% Similarity=0.302 Sum_probs=91.9
Q ss_pred HHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCC-CCCCHHHHHHHHHHhhcc
Q 007944 12 AKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSN-IPGGPEMFEKAAKFCYGV 89 (584)
Q Consensus 12 ~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~d-i~gg~~aFe~vl~F~Ytg 89 (584)
.+.+....++.++.+|||+|.|+|+.|+|||.||+++|+||++||. ++.+ ...|.+++ ++ +++|+.+++|+|||
T Consensus 18 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~--~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 18 NILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVT--ARGFGPLLQFAYTA 93 (125)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCC--HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCC--HHHHHHHHHhHcCC
Confidence 3445555678889999999999999999999999999999999999 5555 56799998 99 99999999999999
Q ss_pred cccCChhhHHHHHHHHHHccCch--hhhhHh
Q 007944 90 NFEITVHNVAALRCAAEFLQMTD--KYCENN 118 (584)
Q Consensus 90 ~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~n 118 (584)
++.++.+|+..|+.+|++|+|+. +.|+++
T Consensus 94 ~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 94 KLLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp EEEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred ceEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 99999999999999999999999 556544
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=1.3e-20 Score=169.57 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=91.9
Q ss_pred ChHHHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEe-CCCCCCHHHHHHHHHHhh
Q 007944 10 SSAKERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINL-SNIPGGPEMFEKAAKFCY 87 (584)
Q Consensus 10 s~~~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L-~di~gg~~aFe~vl~F~Y 87 (584)
++.+.+....++.++.+|||+|.|+|+.|+|||.||+++|+||++||. ++.++ ..|.+ .+++ +++|+.+++|+|
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~--~~~f~~lL~~iY 88 (124)
T 2ihc_A 13 STNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVT--VKGFEPLIQFAY 88 (124)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcC--HHHHHHHHHHhc
Confidence 344555566788889999999999999999999999999999999999 55543 57889 4898 999999999999
Q ss_pred cccccCChhhHHHHHHHHHHccCch--hhhhHhHH
Q 007944 88 GVNFEITVHNVAALRCAAEFLQMTD--KYCENNLA 120 (584)
Q Consensus 88 tg~i~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~ 120 (584)
||++.++.+|+.+|+.+|++|+|+. +.|+++|.
T Consensus 89 tg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 89 TAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999999999999999999 66666553
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.82 E-value=3.2e-20 Score=167.92 Aligned_cols=103 Identities=24% Similarity=0.340 Sum_probs=88.0
Q ss_pred HHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeC-CCCCCHHHHHHHHHHhhcccc
Q 007944 13 KERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLS-NIPGGPEMFEKAAKFCYGVNF 91 (584)
Q Consensus 13 ~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~-di~gg~~aFe~vl~F~Ytg~i 91 (584)
+.+....++.++.+|||+|.|+|+.|+|||.||+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|||++
T Consensus 20 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~ 94 (129)
T 3ga1_A 20 ILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRL 94 (129)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCcc
Confidence 44445557888999999999999999999999999999999999843 55689997 999 9999999999999999
Q ss_pred cCChhhHHHHHHHHHHccCch--hhhhHhHH
Q 007944 92 EITVHNVAALRCAAEFLQMTD--KYCENNLA 120 (584)
Q Consensus 92 ~it~~NV~~Ll~AA~~Lqm~e--~~c~~nL~ 120 (584)
.++.+|+..|+.+|++|+|+. +.|+++|.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999 45555544
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=1.5e-19 Score=162.22 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=84.1
Q ss_pred HhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChhhHH
Q 007944 20 VFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVHNVA 99 (584)
Q Consensus 20 ~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~NV~ 99 (584)
.+.++.+|||+|.|+|+.|+|||+||+++|+||++ ....|.|++++ +++|+.+++|+|||++.++.+|+.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36679999999999999999999999999999974 34579999999 999999999999999999999999
Q ss_pred HHHHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 100 ALRCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 100 ~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
.|+.||++|+|+. |++.|++++.
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~ 116 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARG 116 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC-
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999 7777766543
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.78 E-value=6.8e-19 Score=156.85 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=85.9
Q ss_pred HHhhhHHHhhcCCCccEEEEECCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhcccc-
Q 007944 13 KERTGQWVFSQEIPTDIVVAVGEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVNF- 91 (584)
Q Consensus 13 ~~r~~~w~~~~~~~sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i- 91 (584)
+......++.++.+|||+|.|+|+.|+|||.||+++|+||++||.+. ...|.+++++ +++|+.+++|+|||++
T Consensus 18 l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~ 91 (116)
T 3fkc_A 18 LLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIV 91 (116)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcC
Confidence 44445567888999999999999999999999999999999999842 4689999999 9999999999999999
Q ss_pred cCChhhHHHHHHHHHHccCch
Q 007944 92 EITVHNVAALRCAAEFLQMTD 112 (584)
Q Consensus 92 ~it~~NV~~Ll~AA~~Lqm~e 112 (584)
.++.+|+.+++.+|++|+|+.
T Consensus 92 ~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 92 RVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp SCCHHHHHHHHHHHHHHTCHH
T ss_pred CCCHHHHHHHHHHHHHhCccc
Confidence 799999999999999999998
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.31 E-value=5.8e-12 Score=118.44 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=77.0
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhc--cCc-cCCcceEEeCCCCCCHHHHHHHHHHhhccc--------------
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLII--ESK-EADLTRINLSNIPGGPEMFEKAAKFCYGVN-------------- 90 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~--~~~-Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~-------------- 90 (584)
|+|+. +|+.|.+|+.+ |+.|+||++||. ++. |+....|.|++++ +.+++.|++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 67765 79999999999 899999999998 445 6666789999999 999999999999987
Q ss_pred ------------ccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 91 ------------FEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 91 ------------i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
+.++.+++.+|+.||+||++.. |...|..|+..
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~ 124 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVAN 124 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHH
Confidence 8899999999999999999999 66666555544
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.19 E-value=6e-11 Score=102.51 Aligned_cols=79 Identities=18% Similarity=0.273 Sum_probs=65.6
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhcc---CccCCcceEEeCCCCCCHHHHHHHHHHhh-----c---cccc---C
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLIIE---SKEADLTRINLSNIPGGPEMFEKAAKFCY-----G---VNFE---I 93 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~~---~~Es~~~~I~L~di~gg~~aFe~vl~F~Y-----t---g~i~---i 93 (584)
|+++. +|+.|.+||.+ |+.|+||++||.+ +.|+....|.|++++ +.+++.+++||| + +.+. +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 78999999999 9999999999983 556677899999999 999999999999 5 6776 9
Q ss_pred ChhhHHHHHHHHHHccC
Q 007944 94 TVHNVAALRCAAEFLQM 110 (584)
Q Consensus 94 t~~NV~~Ll~AA~~Lqm 110 (584)
+.+++.+|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.93 E-value=2.5e-09 Score=98.58 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=76.5
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhccc-----------------
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVN----------------- 90 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~----------------- 90 (584)
|++.. +|+.|.+|+.+ |..|++|+.||.+.. ...|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 66766 78999999998 899999999998432 4579999999 899999999999865
Q ss_pred ---------ccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 91 ---------FEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 91 ---------i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
+.++.+++.+|+.||+||++.. |...|..++..
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~ 119 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVAN 119 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHH
Confidence 7789999999999999999999 66666555544
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.60 E-value=7.5e-09 Score=97.34 Aligned_cols=90 Identities=18% Similarity=0.293 Sum_probs=46.6
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhccCccCCcceEEeCCCCCCHHHHHHHHHHhhccc-----------------
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLIIESKEADLTRINLSNIPGGPEMFEKAAKFCYGVN----------------- 90 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~----------------- 90 (584)
|+|.. +|+.|.+|+.+ |..|+||+.||.+.. ....|.|++++ +.+++.|++|||...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998432 23479999999 899999999999965
Q ss_pred ----------ccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 91 ----------FEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 91 ----------i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
+.++..++.+|+.||+||++.. |...|..++..
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~ 123 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVAD 123 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHH
Confidence 4688899999999999999999 77766565543
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.43 E-value=8.5e-07 Score=76.85 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=67.2
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhc-cCccCCcceEEeCCCCCCHHHHHHHHHHhhccc--------------cc
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLII-ESKEADLTRINLSNIPGGPEMFEKAAKFCYGVN--------------FE 92 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~-~~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~--------------i~ 92 (584)
|++.. +|+.|.+|+.+ |..|++++.|+. ++ +.....|.|++++ +.+++.|++|||.-+ ..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 66766 89999999997 899999999998 44 5555689999999 899999999999732 36
Q ss_pred CChhhHHHHHHHHHHccC
Q 007944 93 ITVHNVAALRCAAEFLQM 110 (584)
Q Consensus 93 it~~NV~~Ll~AA~~Lqm 110 (584)
+..+.+.+|+.||+||++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 788899999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.41 E-value=6e-07 Score=77.35 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=64.3
Q ss_pred EEEEE-CCeEEEeeHHHhhccCHHHHHhhcc--C-ccCCcceEEeCCCCCCHHHHHHHHHHhhccc-----------ccC
Q 007944 29 IVVAV-GEANFPLHKFMLVAKSNYIRKLIIE--S-KEADLTRINLSNIPGGPEMFEKAAKFCYGVN-----------FEI 93 (584)
Q Consensus 29 V~I~V-~g~~F~~HK~vLaa~S~yFr~mf~~--~-~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~-----------i~i 93 (584)
|++.. +|..|.+|+.+ |..|++|+.|+.+ . .|+....|.|++++ +.+++.|++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 55655 79999999996 8999999999983 2 45556789999999 899999999999733 467
Q ss_pred ChhhHHHHHHHHHHccC
Q 007944 94 TVHNVAALRCAAEFLQM 110 (584)
Q Consensus 94 t~~NV~~Ll~AA~~Lqm 110 (584)
..+.+.+|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88899999999999985
No 27
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=5.6e-07 Score=78.51 Aligned_cols=76 Identities=13% Similarity=0.079 Sum_probs=65.3
Q ss_pred HHHHHHhhhhhhhHHhhcCHHHHHHHhHHhHHHHHHHHhhhhhhhhccCCCCCCCCCCcccccccCCHHHHHHHHHHHhh
Q 007944 126 FLSQVALSSLSGAVVVLKSCEALLPLAEDLLIVQRCIDVATAKACYEANFPCRTPPNWWTEELSIIDIEFFSRIIAAMKK 205 (584)
Q Consensus 126 ~ln~~~~~~~adsi~vL~sc~~L~~~Ae~~~I~~rc~d~ia~ka~~~~~~~~~~~~dWW~EDl~~L~~d~~~rvI~a~~~ 205 (584)
.-||+.+..+++. ++|.+|...|..| |.++|.++.. .++|..|+.+.+..+|+..
T Consensus 10 ~~NCl~i~~~A~~----~~~~~L~~~a~~f-i~~nF~~v~~------------------~~eFl~L~~~~L~~lL~sd-- 64 (105)
T 2eqx_A 10 VGNCLQVMWLADR----HSDPELYTAAKHC-AKTHLAQLQN------------------TEEFLHLPHRLLTDIISDG-- 64 (105)
T ss_dssp TTTHHHHHHHHHH----TTCHHHHHHHHHH-HHHTCHHHHT------------------SHHHHHSCHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHH-HHHHHHHHHh------------------cccHhhCCHHHHHHHHcCC--
Confidence 4578889999996 9999999999999 9999999875 4899999999999999873
Q ss_pred CCCChHHHHHHHHHHHHHhhhh
Q 007944 206 RGAKALTIASALITYTERSLRD 227 (584)
Q Consensus 206 ~~~~ee~v~~al~~ya~k~l~~ 227 (584)
..+|+.|++|+++|+++....
T Consensus 65 -v~~E~~vf~av~~Wv~~d~~~ 85 (105)
T 2eqx_A 65 -VPCSQNPTEAIEAWINFNKEE 85 (105)
T ss_dssp -EETTSCHHHHHHHHHHTTHHH
T ss_pred -CCCHHHHHHHHHHHHHcCHHH
Confidence 458889999999998776543
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.14 E-value=1.2e-05 Score=76.14 Aligned_cols=93 Identities=12% Similarity=0.253 Sum_probs=71.9
Q ss_pred cEEEEE-CCeEEEeeHHHhhccCHHHHHhhccCcc-----CCcceEEeCCCCCCHHHHHHHHHHhhccc-----------
Q 007944 28 DIVVAV-GEANFPLHKFMLVAKSNYIRKLIIESKE-----ADLTRINLSNIPGGPEMFEKAAKFCYGVN----------- 90 (584)
Q Consensus 28 DV~I~V-~g~~F~~HK~vLaa~S~yFr~mf~~~~E-----s~~~~I~L~di~gg~~aFe~vl~F~Ytg~----------- 90 (584)
-|+|+. +|+.|.+++.+ |..|++++.|+.+... .....|.|++++ +.+++.|++|||.-+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 356655 68999999997 7899999999983321 233679999999 899999999998632
Q ss_pred --------------ccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHHH
Q 007944 91 --------------FEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLSQ 129 (584)
Q Consensus 91 --------------i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln~ 129 (584)
+.+....+.+|+.||+||+|.. |...|...+..
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~ 131 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAE 131 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 3567788999999999999999 77666454433
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.92 E-value=2.4e-05 Score=69.29 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=63.5
Q ss_pred EEEE-ECCeEEEeeHHHhhccCHHHHHhhccC---ccCCcceEEeCCCCCCHHHHHHHHHHhhccc-----------ccC
Q 007944 29 IVVA-VGEANFPLHKFMLVAKSNYIRKLIIES---KEADLTRINLSNIPGGPEMFEKAAKFCYGVN-----------FEI 93 (584)
Q Consensus 29 V~I~-V~g~~F~~HK~vLaa~S~yFr~mf~~~---~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~-----------i~i 93 (584)
|+|+ .+|..|.+++. .|..|+.++.|+.+. .|.....|.|++|+ +.+++.|++|||.-. ..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 5555 37999999999 578999999999832 34445689999999 899999999998632 467
Q ss_pred ChhhHHHHHHHHHHccC
Q 007944 94 TVHNVAALRCAAEFLQM 110 (584)
Q Consensus 94 t~~NV~~Ll~AA~~Lqm 110 (584)
....+.+|+.||+||++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88899999999999985
No 30
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.78 E-value=0.00016 Score=63.18 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=70.5
Q ss_pred cEEEEECCeEEEeeHHHhhccC-HHHHHhhccC-c----cCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHH
Q 007944 28 DIVVAVGEANFPLHKFMLVAKS-NYIRKLIIES-K----EADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAA 100 (584)
Q Consensus 28 DV~I~V~g~~F~~HK~vLaa~S-~yFr~mf~~~-~----Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~ 100 (584)
=|+|.|||+.|...+..|.... .+|.+||.+. . .....++-+ |-+ |..|+.|++|+.+|++.+..+ ....
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRd--p~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSC--HHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCC--hHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999876 4789998731 1 112344544 677 999999999999999987543 3578
Q ss_pred HHHHHHHccCchhhhhHhHHHHHHHH
Q 007944 101 LRCAAEFLQMTDKYCENNLAGRTEDF 126 (584)
Q Consensus 101 Ll~AA~~Lqm~e~~c~~nL~~~~e~~ 126 (584)
++.-|+|+++++ |++.|++-
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~ 103 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDK 103 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHH
Confidence 999999999999 77777543
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.41 E-value=0.0037 Score=55.39 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=62.5
Q ss_pred EEEEECCeEEEeeHHHhhccCH-HHHHhhccC--ccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHHHHHH
Q 007944 29 IVVAVGEANFPLHKFMLVAKSN-YIRKLIIES--KEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAALRCA 104 (584)
Q Consensus 29 V~I~V~g~~F~~HK~vLaa~S~-yFr~mf~~~--~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~Ll~A 104 (584)
|+|.|||+.|...+..|...-+ .|.+||.+. ......++-+ |-+ |..|+.|++|.-+|++.+..+ .+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRH--PGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSC--TTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecC--hHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7899999999999999987643 456666521 1223445555 455 799999999999999987653 56789999
Q ss_pred HHHccCch
Q 007944 105 AEFLQMTD 112 (584)
Q Consensus 105 A~~Lqm~e 112 (584)
|+|+++++
T Consensus 84 a~fy~i~~ 91 (115)
T 3kvt_A 84 LEFWGLDS 91 (115)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCh
Confidence 99999999
No 32
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.93 E-value=0.014 Score=56.54 Aligned_cols=91 Identities=15% Similarity=0.227 Sum_probs=68.6
Q ss_pred EEEEECCeEEEeeHHHhhccC-HHHHHhhccC---c--cCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHHH
Q 007944 29 IVVAVGEANFPLHKFMLVAKS-NYIRKLIIES---K--EADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAAL 101 (584)
Q Consensus 29 V~I~V~g~~F~~HK~vLaa~S-~yFr~mf~~~---~--Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~L 101 (584)
|+|.|||..|...+..|.... .+|.+||.+. . .....++-| |-+ |..|+.|++|+-+|++.+..+ ....+
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 678999999999999998765 3788998721 1 112334544 556 799999999999999987543 34679
Q ss_pred HHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 102 RCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 102 l~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
+.-|+|+++++ |+..|+.-+.
T Consensus 91 ~eEA~FygL~~------Lv~~l~~~i~ 111 (202)
T 3drx_A 91 LEEAEFYNITS------LIKLVKDKIR 111 (202)
T ss_dssp HHHHHHTTCHH------HHHHHHHHHH
T ss_pred HHHHHHCCcHH------HHHHHHHHHH
Confidence 99999999999 6666655554
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.11 E-value=0.089 Score=47.05 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=58.7
Q ss_pred cEEEEECCeEEEeeHHHhhccCHHHHHhhcc-----CccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHHH
Q 007944 28 DIVVAVGEANFPLHKFMLVAKSNYIRKLIIE-----SKEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAAL 101 (584)
Q Consensus 28 DV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~-----~~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~L 101 (584)
=|+|.|||+.|..-+..|...-+ .|+.. .......++-| |-+ |..|+.||+|.-+|++.+..+ .+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSC--HHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCC--hHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 38899999999999999975432 23332 11122334444 456 899999999999999987543 47889
Q ss_pred HHHHHHccCch
Q 007944 102 RCAAEFLQMTD 112 (584)
Q Consensus 102 l~AA~~Lqm~e 112 (584)
+.-|+|+++++
T Consensus 88 ~~Ea~fy~i~~ 98 (124)
T 1s1g_A 88 DDELAFYGILP 98 (124)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHcCCCh
Confidence 99999999998
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.65 E-value=0.065 Score=46.13 Aligned_cols=81 Identities=10% Similarity=0.095 Sum_probs=59.1
Q ss_pred EEEEECCeEEEeeHHHhhccCH-HHHHhhcc--CccCCcceEEeCCCCCCHHHHHHHHHHhhc-ccccCChh-hHHHHHH
Q 007944 29 IVVAVGEANFPLHKFMLVAKSN-YIRKLIIE--SKEADLTRINLSNIPGGPEMFEKAAKFCYG-VNFEITVH-NVAALRC 103 (584)
Q Consensus 29 V~I~V~g~~F~~HK~vLaa~S~-yFr~mf~~--~~Es~~~~I~L~di~gg~~aFe~vl~F~Yt-g~i~it~~-NV~~Ll~ 103 (584)
|+|.|||+.|...+..|...-+ .+.+|+.. .-.....++-+ |-+ |..|+.|++|.-+ |++.+..+ .+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRd--p~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRN--RPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSC--STTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCC--hHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 7899999999999999965421 23334431 11223445555 555 7999999999998 89876543 4678999
Q ss_pred HHHHccCch
Q 007944 104 AAEFLQMTD 112 (584)
Q Consensus 104 AA~~Lqm~e 112 (584)
-|+|+++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999999
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.61 E-value=0.11 Score=47.43 Aligned_cols=80 Identities=16% Similarity=0.166 Sum_probs=59.5
Q ss_pred ccEEEEECCeEEEeeHHHhhccCHHHHHhhccC-----ccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHH
Q 007944 27 TDIVVAVGEANFPLHKFMLVAKSNYIRKLIIES-----KEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAA 100 (584)
Q Consensus 27 sDV~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~-----~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~ 100 (584)
.=|+|.|||+.|...+..|...-+ .|+... ......++-| |-+ |..|+.||+|.-+|++.+..+ .+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRd--p~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRD--PEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSC--HHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCC--cHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 348889999999999999975432 244321 1123344444 456 899999999999999887543 4788
Q ss_pred HHHHHHHccCch
Q 007944 101 LRCAAEFLQMTD 112 (584)
Q Consensus 101 Ll~AA~~Lqm~e 112 (584)
++.-|+|+++++
T Consensus 109 l~eEa~fy~i~~ 120 (140)
T 2nz0_B 109 YDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHTCCG
T ss_pred HHHHHHHcCCCh
Confidence 999999999999
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.11 E-value=0.094 Score=45.44 Aligned_cols=78 Identities=17% Similarity=0.240 Sum_probs=58.1
Q ss_pred EEEEECCeEEEeeHHHhhccCHHHHHhhccC-----ccCCcceEEeCCCCCCHHHHHHHHHHhhcccccCChh-hHHHHH
Q 007944 29 IVVAVGEANFPLHKFMLVAKSNYIRKLIIES-----KEADLTRINLSNIPGGPEMFEKAAKFCYGVNFEITVH-NVAALR 102 (584)
Q Consensus 29 V~I~V~g~~F~~HK~vLaa~S~yFr~mf~~~-----~Es~~~~I~L~di~gg~~aFe~vl~F~Ytg~i~it~~-NV~~Ll 102 (584)
|+|.|||+.|...+..|...-+ .|+... ......++-+ |-+ |..|+.|++|.-+|++.+..+ .+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRd--p~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRD--PDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSC--TTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCC--cHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999999976432 233321 1122344444 445 799999999999999887543 478899
Q ss_pred HHHHHccCch
Q 007944 103 CAAEFLQMTD 112 (584)
Q Consensus 103 ~AA~~Lqm~e 112 (584)
.-|+|+++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999998
No 37
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=73.50 E-value=6.1 Score=43.17 Aligned_cols=83 Identities=7% Similarity=0.070 Sum_probs=58.2
Q ss_pred cEEEEECCeEEEeeHHHhhccCHH-HHHhhc--cCccCCcceEEeCCCCCCHHHHHHHHHHhhc-ccccCChh-hHHHHH
Q 007944 28 DIVVAVGEANFPLHKFMLVAKSNY-IRKLII--ESKEADLTRINLSNIPGGPEMFEKAAKFCYG-VNFEITVH-NVAALR 102 (584)
Q Consensus 28 DV~I~V~g~~F~~HK~vLaa~S~y-Fr~mf~--~~~Es~~~~I~L~di~gg~~aFe~vl~F~Yt-g~i~it~~-NV~~Ll 102 (584)
=|+|.|||+.|...+..|...-+- +.+++. ..-.....+.-+ |-+ |..|+.+++|..+ |++.+..+ .+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~--~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRN--RPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSC--HHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCC--hHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 477899999999999998643211 111222 111223445555 666 9999999999999 99876543 456788
Q ss_pred HHHHHccCchh
Q 007944 103 CAAEFLQMTDK 113 (584)
Q Consensus 103 ~AA~~Lqm~e~ 113 (584)
.-|+|+++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 89999999983
No 38
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=54.64 E-value=16 Score=27.65 Aligned_cols=30 Identities=10% Similarity=-0.036 Sum_probs=23.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007944 490 ADVLLIKENEALRSELTRMKLYISDVQKGN 519 (584)
Q Consensus 490 ~~~~~~~e~~~lk~e~~~m~~r~~ele~~~ 519 (584)
++..+++||.+||..++.++.++.||.+..
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888888888887653
No 39
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=46.85 E-value=14 Score=32.26 Aligned_cols=33 Identities=6% Similarity=-0.023 Sum_probs=26.0
Q ss_pred hhcCCCCCChhHHHHHhhhcCCCCcccchhhHHHHHHHHHhCCC
Q 007944 377 EIATSGELSISKFNGIANLVPKGSRKVDDDLYRAIDIYLKAHPN 420 (584)
Q Consensus 377 EiA~D~~L~~~kF~~lae~lP~~aR~~~DglYrAiDiyLk~Hp~ 420 (584)
|...|.+.+|.++...+ .|+++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 56677888888886655 7889999999999994
No 40
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=41.45 E-value=19 Score=27.14 Aligned_cols=25 Identities=36% Similarity=0.303 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q 007944 495 IKENEALRSELTRMKLYISDVQKGN 519 (584)
Q Consensus 495 ~~e~~~lk~e~~~m~~r~~ele~~~ 519 (584)
.-|.+.||.|++.+|.|+.+|.+++
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~ 42 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEEN 42 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999876
No 41
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=40.67 E-value=13 Score=27.68 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=26.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 007944 492 VLLIKENEALRSELTRMKLYISDVQKGNNQ 521 (584)
Q Consensus 492 ~~~~~e~~~lk~e~~~m~~r~~ele~~~~~ 521 (584)
..++.||-.||.|++.=...++.||.|.+.
T Consensus 13 e~Lk~ENshLrrEL~dNS~~lskLE~ets~ 42 (54)
T 1deb_A 13 EALKMENSNLRQELEDNSNHLTKLETEASN 42 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHhhHHHHHHHHhhhhh
Confidence 467899999999999999999999999755
No 42
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=39.45 E-value=9.3 Score=24.65 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=14.2
Q ss_pred hhHHHHHHHHHHccCch
Q 007944 96 HNVAALRCAAEFLQMTD 112 (584)
Q Consensus 96 ~NV~~Ll~AA~~Lqm~e 112 (584)
.||+.|+.||+||+=-+
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 48999999999998544
No 43
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.29 E-value=45 Score=27.91 Aligned_cols=34 Identities=12% Similarity=0.001 Sum_probs=28.8
Q ss_pred ccccCChhhHHHHHHHHHHccCchhhhhHhHHHHHHHHHH
Q 007944 89 VNFEITVHNVAALRCAAEFLQMTDKYCENNLAGRTEDFLS 128 (584)
Q Consensus 89 g~i~it~~NV~~Ll~AA~~Lqm~e~~c~~nL~~~~e~~ln 128 (584)
+.-.++++|...++..|+.++.++ |...|..|+.
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~ 37 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAK 37 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHH
Confidence 344689999999999999999998 8888877764
No 44
>1a92_A Delta antigen; leucine zipper, coiled-coil, oligomerization; 1.80A {Hepatitis delta virus} SCOP: h.4.6.1 PDB: 1by0_A
Probab=29.35 E-value=71 Score=23.64 Aligned_cols=31 Identities=26% Similarity=0.262 Sum_probs=28.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007944 489 QADVLLIKENEALRSELTRMKLYISDVQKGN 519 (584)
Q Consensus 489 ~~~~~~~~e~~~lk~e~~~m~~r~~ele~~~ 519 (584)
..|++.++..++|+.++.+.+..+..||.+.
T Consensus 7 eqWv~~Rkk~eeler~lrk~kk~iKklEdeN 37 (50)
T 1a92_A 7 EQWVSGRKKLEELERDLRKLKKKIKKLEEDN 37 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 3588999999999999999999999999985
No 45
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=21.74 E-value=48 Score=27.15 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=32.5
Q ss_pred ccccHHHHHHHHHHHHhccccccccCCCCCccccCCCchhhhHHHhhhhhhhhhh
Q 007944 324 RLFDLESVRKIISGFVEKEKSMAVFSGSGDFRESCSCSPAMHRVAKTVGTYLGEI 378 (584)
Q Consensus 324 ~~ydvd~v~ri~~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~Vakl~D~yLaEi 378 (584)
..++.+++.||+..+...+.. ..+..++..||+++|-|..|.
T Consensus 7 ~~~~~~lI~ril~~~f~~~kt-------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 7 GGFRKETVERLLRLHFRDGRT-------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp CCCCHHHHHHHHHHHCCSTTC-------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccCcc-------------cccHHHHHHHHHHHHHHHHHH
Confidence 578999999999986643211 134678999999999999883
No 46
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.11 E-value=90 Score=26.63 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=27.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007944 489 QADVLLIKENEALRSELTRMKLYISDVQKGN 519 (584)
Q Consensus 489 ~~~~~~~~e~~~lk~e~~~m~~r~~ele~~~ 519 (584)
..|.+++++++.|+.|-++++.++.+||-+.
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999888664
Done!