Query 007949
Match_columns 583
No_of_seqs 442 out of 5078
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 17:29:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007949.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007949hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0511 Ankyrin repeat protein 100.0 4.6E-43 9.9E-48 333.0 21.3 489 6-574 9-504 (516)
2 KOG0783 Uncharacterized conser 100.0 2.5E-32 5.4E-37 281.9 18.7 279 168-492 556-854 (1267)
3 PHA02713 hypothetical protein; 100.0 7E-29 1.5E-33 268.4 16.2 210 325-564 8-220 (557)
4 KOG4441 Proteins containing BT 99.9 9.9E-28 2.1E-32 258.3 13.5 214 321-561 15-228 (571)
5 PHA02790 Kelch-like protein; P 99.9 1.1E-27 2.4E-32 255.5 13.5 178 336-542 16-197 (480)
6 PHA03098 kelch-like protein; P 99.9 3.5E-27 7.5E-32 257.2 12.8 194 339-563 6-201 (534)
7 KOG4350 Uncharacterized conser 99.9 1.9E-24 4.1E-29 208.1 7.9 189 332-544 34-224 (620)
8 KOG4441 Proteins containing BT 99.8 1.5E-20 3.2E-25 202.8 11.6 223 168-441 34-270 (571)
9 KOG4412 26S proteasome regulat 99.8 1.5E-20 3.2E-25 162.9 8.8 127 7-143 52-184 (226)
10 PHA03098 kelch-like protein; P 99.8 3E-20 6.5E-25 202.7 11.6 191 167-408 6-212 (534)
11 PHA02790 Kelch-like protein; P 99.8 1.6E-20 3.6E-25 200.5 7.4 174 168-373 20-205 (480)
12 PHA02713 hypothetical protein; 99.8 3.8E-20 8.3E-25 200.5 8.8 174 151-361 12-198 (557)
13 KOG4412 26S proteasome regulat 99.8 2E-19 4.4E-24 155.9 6.4 118 16-143 28-151 (226)
14 KOG4350 Uncharacterized conser 99.8 5.9E-19 1.3E-23 170.5 6.6 175 151-361 31-218 (620)
15 KOG2075 Topoisomerase TOP1-int 99.7 8.6E-18 1.9E-22 166.8 9.8 201 330-553 102-308 (521)
16 KOG0509 Ankyrin repeat and DHH 99.7 1.1E-16 2.5E-21 164.7 10.0 120 15-144 68-191 (600)
17 KOG4682 Uncharacterized conser 99.7 3.9E-16 8.4E-21 151.4 10.8 182 335-538 62-245 (488)
18 PHA02859 ankyrin repeat protei 99.6 1.6E-15 3.4E-20 144.1 12.0 115 15-139 76-200 (209)
19 KOG0509 Ankyrin repeat and DHH 99.6 7.9E-16 1.7E-20 158.6 10.4 128 7-143 92-224 (600)
20 PHA02946 ankyin-like protein; 99.6 1.8E-15 3.9E-20 160.0 12.2 159 8-190 54-218 (446)
21 PF00651 BTB: BTB/POZ domain; 99.6 4.8E-16 1E-20 132.3 5.5 106 335-449 3-110 (111)
22 PHA02878 ankyrin repeat protei 99.6 2E-15 4.3E-20 162.5 11.6 154 8-189 149-309 (477)
23 PHA02874 ankyrin repeat protei 99.6 4.7E-15 1E-19 157.6 14.2 126 9-144 107-236 (434)
24 PHA02791 ankyrin-like protein; 99.6 3.2E-15 7E-20 147.5 11.9 147 37-203 65-217 (284)
25 PHA02741 hypothetical protein; 99.6 3.4E-15 7.5E-20 137.0 10.9 117 17-143 13-144 (169)
26 PHA02791 ankyrin-like protein; 99.6 4.6E-15 9.9E-20 146.4 12.2 123 9-143 77-206 (284)
27 KOG4591 Uncharacterized conser 99.6 2.4E-15 5.3E-20 132.1 9.0 150 334-500 58-212 (280)
28 PHA02884 ankyrin repeat protei 99.6 4.2E-15 9.2E-20 146.6 11.3 118 18-144 25-150 (300)
29 PHA03100 ankyrin repeat protei 99.6 8.1E-15 1.7E-19 158.2 12.3 173 7-203 87-273 (480)
30 KOG0508 Ankyrin repeat protein 99.6 2.2E-15 4.8E-20 148.9 6.8 118 15-143 107-227 (615)
31 PHA02878 ankyrin repeat protei 99.6 1E-14 2.2E-19 157.0 12.1 125 7-141 182-310 (477)
32 PF00651 BTB: BTB/POZ domain; 99.6 1.4E-14 3.1E-19 123.1 10.3 96 169-264 9-107 (111)
33 PHA02875 ankyrin repeat protei 99.6 1.4E-14 3.1E-19 153.1 12.3 170 7-203 16-225 (413)
34 KOG0195 Integrin-linked kinase 99.6 9.6E-15 2.1E-19 135.7 8.7 115 15-139 24-141 (448)
35 KOG0512 Fetal globin-inducing 99.6 1.4E-14 3E-19 125.1 9.0 107 34-142 64-174 (228)
36 KOG0502 Integral membrane anky 99.6 5.1E-15 1.1E-19 132.5 6.3 120 15-144 150-272 (296)
37 PHA02716 CPXV016; CPX019; EVM0 99.6 1.4E-14 2.9E-19 158.6 10.8 78 16-101 167-249 (764)
38 PHA02743 Viral ankyrin protein 99.5 1.5E-14 3.2E-19 132.3 8.9 119 15-143 10-140 (166)
39 PHA02859 ankyrin repeat protei 99.5 3.5E-14 7.6E-19 134.9 11.8 112 18-139 44-166 (209)
40 PHA03095 ankyrin-like protein; 99.5 2.9E-14 6.3E-19 153.5 12.5 127 7-143 28-164 (471)
41 PHA02798 ankyrin-like protein; 99.5 3.7E-14 8.1E-19 152.9 12.6 127 6-141 51-192 (489)
42 PHA02874 ankyrin repeat protei 99.5 4.7E-14 1E-18 150.0 12.6 127 7-143 49-202 (434)
43 PHA03095 ankyrin-like protein; 99.5 4.2E-14 9.1E-19 152.3 12.0 127 7-143 64-199 (471)
44 PHA03100 ankyrin repeat protei 99.5 5.9E-14 1.3E-18 151.5 11.9 127 7-143 122-262 (480)
45 PHA02743 Viral ankyrin protein 99.5 8.4E-14 1.8E-18 127.3 11.0 107 15-131 47-161 (166)
46 PHA02946 ankyin-like protein; 99.5 7E-14 1.5E-18 148.0 12.0 126 7-143 86-220 (446)
47 PHA02989 ankyrin repeat protei 99.5 7.8E-14 1.7E-18 150.6 12.4 168 15-203 98-279 (494)
48 PHA02875 ankyrin repeat protei 99.5 7.9E-14 1.7E-18 147.4 12.1 112 22-143 99-214 (413)
49 PHA02716 CPXV016; CPX019; EVM0 99.5 5.5E-14 1.2E-18 153.9 10.9 124 7-140 193-361 (764)
50 PLN03192 Voltage-dependent pot 99.5 9.1E-14 2E-18 158.5 12.2 125 7-143 539-667 (823)
51 KOG0512 Fetal globin-inducing 99.5 5.7E-14 1.2E-18 121.3 7.8 116 16-141 88-208 (228)
52 KOG2838 Uncharacterized conser 99.5 4.9E-14 1.1E-18 129.8 7.6 64 171-234 131-196 (401)
53 smart00225 BTB Broad-Complex, 99.5 1.5E-13 3.3E-18 111.5 9.8 89 172-260 1-89 (90)
54 PHA02798 ankyrin-like protein; 99.5 1.2E-13 2.5E-18 149.1 11.2 128 7-143 19-157 (489)
55 KOG4591 Uncharacterized conser 99.5 1.3E-13 2.9E-18 121.3 8.9 126 157-291 59-199 (280)
56 PHA02795 ankyrin-like protein; 99.5 1.8E-13 3.9E-18 140.4 10.6 126 6-143 131-266 (437)
57 PHA02917 ankyrin-like protein; 99.5 1.9E-13 4.2E-18 150.3 11.4 136 7-144 49-242 (661)
58 KOG0508 Ankyrin repeat protein 99.5 1.2E-13 2.6E-18 136.8 7.7 114 20-143 79-195 (615)
59 PHA02876 ankyrin repeat protei 99.4 3.7E-13 8E-18 151.3 12.0 106 35-142 343-453 (682)
60 PHA02876 ankyrin repeat protei 99.4 5E-13 1.1E-17 150.3 12.3 118 15-142 365-487 (682)
61 PHA02989 ankyrin repeat protei 99.4 4.8E-13 1E-17 144.5 11.4 127 7-143 125-301 (494)
62 KOG0510 Ankyrin repeat protein 99.4 3.1E-13 6.6E-18 142.3 9.2 118 18-143 266-389 (929)
63 PF12796 Ank_2: Ankyrin repeat 99.4 1.7E-12 3.8E-17 105.5 11.0 84 37-124 1-87 (89)
64 smart00225 BTB Broad-Complex, 99.4 5.1E-13 1.1E-17 108.4 7.7 90 344-443 1-90 (90)
65 KOG0510 Ankyrin repeat protein 99.4 9.4E-13 2E-17 138.7 10.6 183 9-201 104-327 (929)
66 PHA02736 Viral ankyrin protein 99.4 2.7E-13 6E-18 122.5 5.7 115 17-143 9-138 (154)
67 KOG4214 Myotrophin and similar 99.4 1.4E-12 3E-17 100.8 7.5 92 15-115 25-116 (117)
68 KOG4177 Ankyrin [Cell wall/mem 99.4 1.2E-12 2.5E-17 146.4 9.8 127 15-143 464-618 (1143)
69 PHA02741 hypothetical protein; 99.4 1.9E-12 4.1E-17 118.8 9.7 100 15-122 50-158 (169)
70 KOG2075 Topoisomerase TOP1-int 99.4 6.9E-12 1.5E-16 125.2 13.4 124 168-291 112-251 (521)
71 PHA02917 ankyrin-like protein; 99.4 3.1E-12 6.7E-17 140.9 11.7 174 14-202 21-253 (661)
72 PHA02736 Viral ankyrin protein 99.3 2E-12 4.4E-17 116.8 7.6 98 18-123 48-153 (154)
73 PHA02730 ankyrin-like protein; 99.3 3.6E-12 7.8E-17 137.1 10.7 123 7-140 360-505 (672)
74 KOG0514 Ankyrin repeat protein 99.3 2E-12 4.3E-17 124.4 6.9 118 17-145 260-387 (452)
75 KOG4177 Ankyrin [Cell wall/mem 99.3 2.4E-12 5.3E-17 143.8 8.7 118 15-140 530-653 (1143)
76 PHA02795 ankyrin-like protein; 99.3 5.1E-12 1.1E-16 129.8 10.0 154 9-191 93-265 (437)
77 PHA02884 ankyrin repeat protei 99.3 7.9E-12 1.7E-16 123.5 10.9 117 7-138 47-172 (300)
78 KOG0505 Myosin phosphatase, re 99.3 3.1E-12 6.6E-17 129.5 7.9 124 11-144 58-244 (527)
79 PF12796 Ank_2: Ankyrin repeat 99.3 9.8E-12 2.1E-16 101.0 7.7 77 8-96 12-89 (89)
80 KOG0502 Integral membrane anky 99.3 1.7E-11 3.6E-16 110.2 8.8 117 15-143 119-238 (296)
81 cd00204 ANK ankyrin repeats; 99.3 6.6E-11 1.4E-15 102.1 11.9 114 20-143 2-118 (126)
82 PHA02730 ankyrin-like protein; 99.2 3.5E-11 7.5E-16 129.6 10.8 119 17-143 32-167 (672)
83 PLN03192 Voltage-dependent pot 99.2 5.6E-11 1.2E-15 135.8 12.2 121 7-139 572-697 (823)
84 KOG4214 Myotrophin and similar 99.2 5.5E-11 1.2E-15 92.0 7.5 100 36-138 5-107 (117)
85 PF13637 Ank_4: Ankyrin repeat 99.2 3.6E-11 7.7E-16 87.5 6.1 50 37-86 5-54 (54)
86 KOG0514 Ankyrin repeat protein 99.2 6.1E-11 1.3E-15 114.3 7.7 126 9-145 284-421 (452)
87 PHA02792 ankyrin-like protein; 99.2 1.1E-10 2.5E-15 124.4 10.6 122 7-140 322-452 (631)
88 KOG3676 Ca2+-permeable cation 99.1 1.5E-10 3.2E-15 123.1 9.5 112 22-143 181-320 (782)
89 PF13857 Ank_5: Ankyrin repeat 99.1 7.2E-11 1.6E-15 86.4 4.9 54 52-105 1-55 (56)
90 TIGR00870 trp transient-recept 99.1 1.3E-10 2.8E-15 131.9 9.5 116 22-145 125-271 (743)
91 KOG0195 Integrin-linked kinase 99.1 1.7E-10 3.6E-15 107.8 7.9 109 8-124 49-161 (448)
92 TIGR00870 trp transient-recept 99.1 1.5E-10 3.2E-15 131.5 8.9 126 7-142 31-219 (743)
93 KOG0505 Myosin phosphatase, re 99.1 1.6E-10 3.4E-15 117.3 7.6 126 6-141 86-274 (527)
94 PF13857 Ank_5: Ankyrin repeat 99.1 1.1E-10 2.5E-15 85.3 4.3 51 15-73 6-56 (56)
95 PTZ00322 6-phosphofructo-2-kin 99.0 9.3E-10 2E-14 122.2 11.8 103 35-139 84-196 (664)
96 KOG0507 CASK-interacting adapt 99.0 2.1E-10 4.6E-15 120.3 5.1 117 17-143 41-160 (854)
97 PHA02792 ankyrin-like protein; 99.0 9.6E-10 2.1E-14 117.4 9.9 109 7-123 353-480 (631)
98 COG0666 Arp FOG: Ankyrin repea 99.0 2.8E-09 6E-14 102.2 12.2 120 16-145 64-194 (235)
99 KOG0507 CASK-interacting adapt 99.0 4.9E-10 1.1E-14 117.7 7.1 130 7-144 63-202 (854)
100 KOG0783 Uncharacterized conser 99.0 1.1E-09 2.3E-14 115.6 8.8 122 170-291 710-848 (1267)
101 KOG0511 Ankyrin repeat protein 99.0 4.1E-09 8.8E-14 102.2 12.0 110 180-290 301-430 (516)
102 KOG1710 MYND Zn-finger and ank 98.9 3E-09 6.5E-14 99.6 8.3 93 17-117 37-133 (396)
103 COG0666 Arp FOG: Ankyrin repea 98.9 1E-08 2.2E-13 98.4 9.9 97 15-119 96-203 (235)
104 KOG0515 p53-interacting protei 98.9 4.4E-09 9.6E-14 105.9 7.2 117 37-154 554-673 (752)
105 PTZ00322 6-phosphofructo-2-kin 98.8 6.9E-09 1.5E-13 115.3 8.7 89 8-104 97-193 (664)
106 KOG0515 p53-interacting protei 98.8 8.3E-09 1.8E-13 104.0 8.1 87 31-117 581-673 (752)
107 PF07707 BACK: BTB And C-termi 98.8 2.3E-09 5E-14 89.6 3.1 96 458-568 1-97 (103)
108 KOG4682 Uncharacterized conser 98.8 2E-08 4.3E-13 98.4 8.7 128 157-291 62-203 (488)
109 cd00204 ANK ankyrin repeats; 98.8 5.1E-08 1.1E-12 83.8 10.3 100 8-115 22-125 (126)
110 PF13637 Ank_4: Ankyrin repeat 98.7 3.1E-08 6.7E-13 71.9 5.8 51 66-116 1-54 (54)
111 KOG4369 RTK signaling protein 98.7 1.9E-08 4.2E-13 109.2 5.5 128 9-144 773-905 (2131)
112 KOG0818 GTPase-activating prot 98.6 1.1E-07 2.5E-12 95.2 7.7 97 18-116 120-220 (669)
113 PF13606 Ank_3: Ankyrin repeat 98.5 1.1E-07 2.4E-12 59.3 3.8 30 65-94 1-30 (30)
114 PF00023 Ank: Ankyrin repeat H 98.4 3.8E-07 8.2E-12 58.5 4.2 33 65-97 1-33 (33)
115 smart00875 BACK BTB And C-term 98.4 1.6E-07 3.6E-12 77.9 2.4 95 458-567 1-95 (101)
116 KOG2384 Major histocompatibili 98.3 7.5E-07 1.6E-11 78.9 5.3 135 56-207 2-143 (223)
117 KOG1710 MYND Zn-finger and ank 98.3 1.8E-06 3.9E-11 81.3 7.9 102 37-140 16-121 (396)
118 KOG3676 Ca2+-permeable cation 98.3 3.2E-06 7E-11 90.7 9.4 87 33-119 240-331 (782)
119 PF13606 Ank_3: Ankyrin repeat 98.2 2.5E-06 5.4E-11 53.2 3.7 30 24-61 1-30 (30)
120 KOG0506 Glutaminase (contains 98.1 3.3E-06 7.2E-11 84.6 5.1 89 36-124 509-601 (622)
121 KOG0705 GTPase-activating prot 98.1 8.2E-06 1.8E-10 83.7 8.0 90 33-122 624-720 (749)
122 PF00023 Ank: Ankyrin repeat H 98.0 6.7E-06 1.5E-10 52.7 3.7 33 24-64 1-33 (33)
123 KOG0782 Predicted diacylglycer 98.0 9.7E-06 2.1E-10 82.8 6.1 106 36-143 869-979 (1004)
124 KOG0705 GTPase-activating prot 97.9 1.7E-05 3.8E-10 81.4 6.4 68 18-93 654-721 (749)
125 KOG4369 RTK signaling protein 97.9 1.4E-05 3.1E-10 87.6 5.0 115 15-139 847-967 (2131)
126 KOG2384 Major histocompatibili 97.8 6.1E-05 1.3E-09 67.0 6.6 70 15-92 2-72 (223)
127 KOG0506 Glutaminase (contains 97.7 2E-05 4.4E-10 79.2 2.7 70 13-90 527-597 (622)
128 KOG0522 Ankyrin repeat protein 97.6 0.00014 3E-09 74.7 7.2 83 36-118 23-111 (560)
129 KOG0522 Ankyrin repeat protein 97.6 0.00013 2.8E-09 74.8 6.9 66 15-88 45-110 (560)
130 KOG0782 Predicted diacylglycer 97.6 0.00017 3.7E-09 74.0 7.1 86 33-118 899-989 (1004)
131 KOG0818 GTPase-activating prot 97.5 0.00016 3.4E-09 73.2 6.6 66 14-87 155-221 (669)
132 KOG0521 Putative GTPase activa 97.3 0.00016 3.4E-09 80.6 4.3 81 37-117 660-743 (785)
133 KOG2716 Polymerase delta-inter 97.2 0.0018 4E-08 60.8 9.1 97 345-450 7-105 (230)
134 KOG2838 Uncharacterized conser 97.2 0.00024 5.1E-09 66.7 2.7 100 331-437 119-220 (401)
135 KOG1987 Speckle-type POZ prote 96.9 0.0018 3.8E-08 65.2 6.3 133 351-496 109-246 (297)
136 KOG3473 RNA polymerase II tran 96.7 0.011 2.3E-07 46.6 7.9 82 345-434 19-111 (112)
137 KOG0520 Uncharacterized conser 96.7 0.00082 1.8E-08 74.7 2.6 121 37-158 578-711 (975)
138 KOG3609 Receptor-activated Ca2 96.4 0.0062 1.3E-07 66.5 6.4 106 32-143 24-143 (822)
139 PF11822 DUF3342: Domain of un 96.3 0.0029 6.3E-08 62.1 3.0 116 351-475 13-136 (317)
140 KOG2716 Polymerase delta-inter 96.3 0.025 5.4E-07 53.4 8.9 90 172-262 6-99 (230)
141 KOG2505 Ankyrin repeat protein 96.2 0.0095 2.1E-07 61.0 6.1 72 46-117 404-481 (591)
142 PF07707 BACK: BTB And C-termi 96.1 0.00084 1.8E-08 55.7 -1.4 97 263-406 1-101 (103)
143 PF02214 BTB_2: BTB/POZ domain 96.1 0.0034 7.3E-08 51.1 2.0 90 345-442 1-94 (94)
144 PF02214 BTB_2: BTB/POZ domain 96.0 0.014 2.9E-07 47.5 5.2 83 173-256 1-89 (94)
145 smart00248 ANK ankyrin repeats 95.9 0.013 2.7E-07 34.9 3.7 28 66-93 2-29 (30)
146 KOG0521 Putative GTPase activa 95.6 0.011 2.3E-07 66.4 3.9 78 64-143 654-734 (785)
147 smart00512 Skp1 Found in Skp1 95.5 0.049 1.1E-06 45.2 6.7 62 345-415 4-66 (104)
148 KOG3609 Receptor-activated Ca2 95.5 0.032 6.9E-07 61.2 6.9 95 15-124 52-159 (822)
149 KOG1724 SCF ubiquitin ligase, 95.2 0.099 2.2E-06 46.7 8.0 102 350-461 13-138 (162)
150 KOG0520 Uncharacterized conser 94.8 0.035 7.6E-07 62.2 5.1 37 55-91 630-666 (975)
151 KOG1665 AFH1-interacting prote 94.8 0.097 2.1E-06 48.2 6.9 94 344-444 10-105 (302)
152 PF03931 Skp1_POZ: Skp1 family 94.8 0.14 2.9E-06 38.0 6.6 56 173-231 3-59 (62)
153 COG5201 SKP1 SCF ubiquitin lig 94.6 0.25 5.4E-06 41.3 8.1 97 349-458 9-130 (158)
154 smart00248 ANK ankyrin repeats 94.3 0.072 1.6E-06 31.4 3.6 24 37-60 6-29 (30)
155 KOG2714 SETA binding protein S 94.1 0.15 3.3E-06 51.7 7.3 87 345-440 13-102 (465)
156 KOG2505 Ankyrin repeat protein 94.1 0.066 1.4E-06 55.1 4.7 40 35-74 432-471 (591)
157 KOG3473 RNA polymerase II tran 93.6 0.32 6.8E-06 38.6 6.5 73 178-251 25-110 (112)
158 smart00512 Skp1 Found in Skp1 93.3 0.37 8.1E-06 39.9 7.3 59 173-232 4-64 (104)
159 PF01466 Skp1: Skp1 family, di 92.9 0.31 6.7E-06 38.0 5.8 54 418-471 11-64 (78)
160 KOG2714 SETA binding protein S 92.8 0.44 9.5E-06 48.5 7.9 87 173-260 13-104 (465)
161 PF03931 Skp1_POZ: Skp1 family 91.7 0.65 1.4E-05 34.3 5.9 56 345-412 3-59 (62)
162 smart00875 BACK BTB And C-term 90.9 0.04 8.6E-07 45.1 -1.4 71 263-362 1-71 (101)
163 KOG1987 Speckle-type POZ prote 88.2 0.26 5.6E-06 49.5 1.8 112 179-290 109-233 (297)
164 KOG1778 CREB binding protein/P 87.7 0.24 5.1E-06 49.5 1.1 144 344-500 28-173 (319)
165 PF11822 DUF3342: Domain of un 85.7 1.2 2.5E-05 44.2 4.7 79 180-259 14-95 (317)
166 KOG1665 AFH1-interacting prote 85.6 2.8 6.1E-05 38.9 6.7 90 171-261 9-104 (302)
167 KOG2715 Uncharacterized conser 83.9 16 0.00035 32.4 10.3 101 343-450 21-122 (210)
168 KOG1724 SCF ubiquitin ligase, 73.7 27 0.00059 31.4 8.9 53 178-232 13-66 (162)
169 PF06128 Shigella_OspC: Shigel 73.3 7.5 0.00016 36.4 5.3 84 37-121 183-279 (284)
170 KOG2715 Uncharacterized conser 70.3 10 0.00022 33.7 5.2 92 171-265 21-119 (210)
171 PF11929 DUF3447: Domain of un 69.5 12 0.00027 28.7 5.2 45 37-88 10-54 (76)
172 PF03158 DUF249: Multigene fam 67.3 12 0.00026 34.0 5.2 45 37-87 147-191 (192)
173 KOG3840 Uncharaterized conserv 46.8 58 0.0012 32.0 6.3 87 344-436 97-185 (438)
174 KOG2723 Uncharacterized conser 42.2 1.3E+02 0.0028 28.5 7.8 94 342-444 7-104 (221)
175 PF06128 Shigella_OspC: Shigel 40.9 1.3E+02 0.0029 28.4 7.5 26 65-90 253-278 (284)
176 PF01466 Skp1: Skp1 family, di 30.7 1E+02 0.0022 23.8 4.4 34 454-487 12-45 (78)
177 KOG2723 Uncharacterized conser 27.7 1.3E+02 0.0028 28.6 5.3 91 170-261 7-103 (221)
178 COG4029 Uncharacterized protei 26.2 16 0.00034 30.6 -0.9 17 561-578 115-131 (142)
179 COG5201 SKP1 SCF ubiquitin lig 23.7 4.7E+02 0.01 22.4 8.5 114 172-288 3-120 (158)
No 1
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=4.6e-43 Score=332.96 Aligned_cols=489 Identities=31% Similarity=0.404 Sum_probs=371.1
Q ss_pred ccchhhhcccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 6 QSTIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 6 ~~~~~~~~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.|+++.+++..+++..+.....|+.+..+..|++||+.|+.+.|++|++.|+++|+.|.+.++||.+|+..||.+++++|
T Consensus 9 ~~~~~~dl~dk~mD~~~~~~s~~~~~~~f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklL 88 (516)
T KOG0511|consen 9 SWTLESDLEDKDMDLQDYKPSVPLKKVPFGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLL 88 (516)
T ss_pred chhhhcchhhhhcchhhcCcccccccCchHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHH
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchHHHHHhhHHHHHHHHhCCCCCCCCCCcccCCccchhccccccccchhhhhhhcccccccCCCCC
Q 007949 86 LESGAICSEHTFDGDRCHYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASN 165 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~~~aa~~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~ 165 (583)
+++||-+.....+|..+||+|.+..|.++|+++...... =.++|...++++++.+..+-
T Consensus 89 LenGAiC~rdtf~G~RC~YgaLnd~IR~mllsydi~KA~---------------------d~~qP~aahi~s~l~dt~l~ 147 (516)
T KOG0511|consen 89 LENGAICSRDTFDGDRCHYGALNDRIRRMLLSYDILKAF---------------------DARQPPAAHIQSSLRDTFLG 147 (516)
T ss_pred HHcCCcccccccCcchhhhhhhhHHHHHHHHHHHHHHHh---------------------hccCCcchHHHHHhhccccc
Confidence 999999999999999999999999999999987653211 12456667788777776552
Q ss_pred CCCCCCcEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHH
Q 007949 166 SDSFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (583)
Q Consensus 166 ~~~~~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (583)
+..|++|.+ +|..|.|||..|++||++|...+..-|.. ...|.-..+-+.+|..+++|+|-..-.+-++....+
T Consensus 148 ---~~~di~f~~q~g~~f~ahkfll~arSs~~~~k~v~~~~~--~heI~~~~v~~~~f~~flk~lyl~~na~~~~qynal 222 (516)
T KOG0511|consen 148 ---CCHDIDFLQQEGANFDAHKFLLEARSSNYFPKDVMFYVQ--GHEIEAHRVILSAFSPFLKQLYLNTNAEWKDQYNAL 222 (516)
T ss_pred ---cccchHHHhhccccccHHHHHHHhhhcccCchhhhhccc--cCchhhhhhhHhhhhHHHHHHHHhhhhhhhhHHHHH
Confidence 356999987 67888999999999999987766544421 233433467789999999999987544555666888
Q ss_pred HHHHhHhchHHHHHHHHHH--HHHHHHHHHcCChhHHHHHHHH-HHhcCCCCccCchhHHHHHHHHHhhhcccCCCcccc
Q 007949 245 VKICKVCKCESLQRIIEKE--LIHQKYAEYKALRDVDNSQKRF-ILQGSALPEEDRLPAALSRILQISLARSNMDHNIDN 321 (583)
Q Consensus 245 l~~a~~~~~~~l~~~l~~~--l~~~~~a~~~~~~~l~~~~~~~-i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 321 (583)
+++..+++.+.+...+... -...+....+.|......-.++ +..+ .+. ++.
T Consensus 223 lsi~~kF~~e~l~~~~~kdr~~~~sR~~k~~q~~~tq~~~~~~Li~~~------------------~~~--------ykt 276 (516)
T KOG0511|consen 223 LSIEVKFSKEKLSLEISKDRMEDLSRICKVCQCESTQKIIEKELIHQR------------------YAE--------YKT 276 (516)
T ss_pred HhhhhhccHHHhHHHHhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHH------------------hhh--------hcc
Confidence 8888888777776666521 1111122222221111111111 0000 000 000
Q ss_pred chhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHH
Q 007949 322 GICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKE 401 (583)
Q Consensus 322 ~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~ 401 (583)
+.+..-+-. ..+.-.+.+ +.+..+ .++|||++++ .|++||+.||.+ +|.|+.. +...+...++.+...
T Consensus 277 ~~dl~Ns~~---~~fsl~~ay--iql~~~-~RyP~hla~i-~R~eyfk~mf~g--~f~e~s~---n~~~p~lslp~~~~~ 344 (516)
T KOG0511|consen 277 HRDLDNSPM---KRFSLQGAY--IQLPEE-DRYPAHLARI-LRVEYFKSMFVG--DFIESSV---NDTRPGLSLPSLADV 344 (516)
T ss_pred chhhccChh---heeeecccc--cccccc-ccccHHHHHH-HHHHHHHHHhcc--chhhhcC---CccccccccchHHHH
Confidence 000000000 000000111 333333 4599999998 889999999998 9999643 235677888989999
Q ss_pred HHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCch--H-HHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHH
Q 007949 402 TFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLF--P-LKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCL 478 (583)
Q Consensus 402 ~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~--~-l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~ 478 (583)
+.+.+++|+|+++. ++.++-+.+++..|+++.+. . |+......+.+....+..-+++.++.++...+...|...+.
T Consensus 345 vveI~lr~lY~d~t-di~~~~A~dvll~ad~lal~~dr~Lkt~as~~itq~~e~id~y~V~dIl~~~wd~~~~rlEqfa~ 423 (516)
T KOG0511|consen 345 VVEIDLRNLYCDQT-DIIFDVASDVLLFADKLALADDRLLKTAASAEITQWLELIDMYGVLDILEYCWDLVACRLEQFAE 423 (516)
T ss_pred HHHHHHHHhhcccc-cchHHHHhhHHHHhhHhhhhhhhhhhhhhhHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999 89999999999999999775 2 67777777777665456678999999999999999999999
Q ss_pred HHHHhhHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHHhHHHH
Q 007949 479 EVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKR 558 (583)
Q Consensus 479 ~~i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~~~~~~ 558 (583)
.|++.|+..+...|++....+. + .+..+ ..+|||++|+++++ ||+.....+.+-+|+++.++++|
T Consensus 424 ~~~a~hl~~l~~dPe~~~~~~~-------s-----~~ri~-~rqeTDtieLlDDi--Ry~l~~~~~~~~~D~~~~~~~d~ 488 (516)
T KOG0511|consen 424 THEARHLLLLLPDPEGDSSLRT-------S-----VPRIP-ARQETDTIELLDDI--RYLLAEALELDMRDESALIFDDR 488 (516)
T ss_pred HHHHHHHHHhcCCchhhHHHHh-------c-----cchhh-hhcccchhHHHHHH--HHHHHHHcCCCcchhHHhhhhhh
Confidence 9999999999999999877654 2 22223 45899999999874 59999999999999999999999
Q ss_pred HHHHHHHhhhccCCCC
Q 007949 559 LEMLMQVAKDEKSEPI 574 (583)
Q Consensus 559 ~~~~~~~~~~~~~~~~ 574 (583)
+.|+.++||-+|++..
T Consensus 489 L~~l~~i~Ey~k~m~m 504 (516)
T KOG0511|consen 489 LAMLVEIAEYEKSMSM 504 (516)
T ss_pred HHHHHHHHHHhhhhhH
Confidence 9999999999998753
No 2
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=100.00 E-value=2.5e-32 Score=281.91 Aligned_cols=279 Identities=23% Similarity=0.317 Sum_probs=193.1
Q ss_pred CCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCC--Cc----------ccEEEcCCCCHHHHHHHhhhhcCCccc
Q 007949 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY--RN----------EIRFSREKLSYPALYGLIHFFYSDRLE 235 (583)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e--~~----------~~~i~l~~v~~~~~~~lL~ylYtg~~~ 235 (583)
..++||+|.||+..|+|||.||++||++|+++|....+. .. .-.|.+++++|..|+.+|+||||+..-
T Consensus 556 ds~hDVtf~vg~~~F~aHKfIl~~rs~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~mfe~lL~~iYtdt~~ 635 (1267)
T KOG0783|consen 556 DSFHDVTFYVGTSMFHAHKFILCARSSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPLMFEILLHYIYTDTLL 635 (1267)
T ss_pred cccceEEEEecCeecccceEEEEeccHHHHHHHHhhccccccceeeeecccccCceeeeccCCHHHHHHHHHHHhccccc
Confidence 457899999999999999999999999999999754322 22 223447899999999999999999642
Q ss_pred C--ChhhHHHHHHHHhHhchHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcc
Q 007949 236 I--AVDDMEDLVKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARS 313 (583)
Q Consensus 236 i--~~~~~~~ll~~a~~~~~~~l~~~l~~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (583)
- ..|++. ..+....-.-+.+.-..|-.....++.+++.+|......+.. ...+++++.+......
T Consensus 636 ~P~heDdid---ci~fs~~k~N~~qrtrtCeMl~~~lekf~l~el~~~~~s~~~-------~~~~~n~ia~~~~N~l--- 702 (1267)
T KOG0783|consen 636 SPWHEDDID---CIRFSPLKENLSQRTRTCEMLANLLEKFHLAELLPFSVSRQP-------LLSLTNDIAQLYNNFL--- 702 (1267)
T ss_pred CCccccchh---hhhccccccChhhcccHHHHHHHHHhhhhHHhhhhhhhhccc-------hhhcccHHHHHhcCee---
Confidence 2 233321 111000000011111134444455555555444433322221 1112222332221111
Q ss_pred cCCCccccchhhHHHHHHHhcccccCCCCCcEEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCe
Q 007949 314 NMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPC 392 (583)
Q Consensus 314 ~~~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~ 392 (583)
.+.+.++.-|+.+.. +|+.++||+++|++|.+||..||.. -|.|+.. ..
T Consensus 703 ---------------------~lsdh~e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~--~w~E~sS-------~t 752 (1267)
T KOG0783|consen 703 ---------------------VLSDHEETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQF--VWMESSS-------IT 752 (1267)
T ss_pred ---------------------EecCCccceeEEEEecCCcCcccceeEeeeHHHHHHHHHHH--HHhhhcc-------ce
Confidence 111123344666666 6778999999999999999999998 8988743 33
Q ss_pred eecCCCCHHHHHHHhhhhcCC-CCC----CCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHh
Q 007949 393 IEEHDLSKETFEKMIEYMYTD-GLK----DIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDM 467 (583)
Q Consensus 393 i~l~~v~~~~~~~~l~~iYt~-~~~----~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~ 467 (583)
+....+..+.++.+|+|+|+. +.. .-..+.+.+++..||.|.+.+|+..|+..|.+.+ +..+|-.++++|..
T Consensus 753 ~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~~dF~~~il~iaDqlli~~Lk~Ice~~ll~kl---~lk~~~~llefaam 829 (1267)
T KOG0783|consen 753 VNLSPLTVEHMSIVLDYLYSDDKVELFKDLKESDFMFEILSIADQLLILELKSICEQSLLRKL---NLKTLPTLLEFAAM 829 (1267)
T ss_pred eecCcchHHHHHHHHHHHHccchHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHh---cccchHHHHHHHHH
Confidence 444455699999999999954 331 1123678999999999999999999999999988 89999999999999
Q ss_pred cCcHHHHHHHHHHHHhhHHHhhCch
Q 007949 468 YGVFKVREYCLEVIACNFETFADSR 492 (583)
Q Consensus 468 ~~~~~L~~~c~~~i~~nf~~v~~~~ 492 (583)
|+++.|+..|++||+.|+..++...
T Consensus 830 Y~ak~L~~~C~dfic~N~~~~Lear 854 (1267)
T KOG0783|consen 830 YHAKELYSRCIDFICHNIEFFLEAR 854 (1267)
T ss_pred hhHHHHHHHHHHHHHHhHHHHHHhc
Confidence 9999999999999999998877543
No 3
>PHA02713 hypothetical protein; Provisional
Probab=99.96 E-value=7e-29 Score=268.45 Aligned_cols=210 Identities=14% Similarity=0.184 Sum_probs=177.5
Q ss_pred hHHHHHHHhcccccCCCCCcEEEEEC-CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHH
Q 007949 325 KLSSSVEAMHISDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (583)
Q Consensus 325 ~l~~~l~~l~~l~~~~~~~Dv~~~~~-~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~ 403 (583)
....+++.|+.++.++.+|||++.++ |+.|+|||.+||++|+||++||.+ +|.|+. ....|.+.++++++|
T Consensus 8 h~~~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~--~~~e~~------~~~~v~l~~v~~~~~ 79 (557)
T PHA02713 8 HNRRVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTT--PMIIRD------LVTRVNLQMFDKDAV 79 (557)
T ss_pred hhHHHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcC--Cchhhc------cCceEEeccCCHHHH
Confidence 34567788888999999999999997 899999999999999999999998 676642 235799999999999
Q ss_pred HHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 007949 404 EKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIAC 483 (583)
Q Consensus 404 ~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~ 483 (583)
+.+|+|+||+. ++.++++++|.+|++|+++.|++.|++||.+++ +++||+.++.+|..+++..|.+.|.+||++
T Consensus 80 ~~ll~y~Yt~~---i~~~nv~~ll~aA~~lqi~~l~~~C~~~l~~~l---~~~NCl~i~~~~~~~~~~~L~~~a~~~i~~ 153 (557)
T PHA02713 80 KNIVQYLYNRH---ISSMNVIDVLKCADYLLIDDLVTDCESYIKDYT---NHDTCIYMYHRLYEMSHIPIVKYIKRMLMS 153 (557)
T ss_pred HHHHHHhcCCC---CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHhhC---CccchHHHHHHHHhccchHHHHHHHHHHHH
Confidence 99999999996 578999999999999999999999999999999 799999999999999999999999999999
Q ss_pred hHHHhhCchhHHHHHhcCCCCCCCccccc-cCCC-CCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHHhHHHHHHH
Q 007949 484 NFETFADSREFRAMLLTLPPPSGDSSFRT-TVPS-APGAIINVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKRLEM 561 (583)
Q Consensus 484 nf~~v~~~~~f~~l~~~~~~~~~~~~~~~-~~~~-~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~ 561 (583)
||..+.++++|.+|+.+ .+..+ ++++ +.+.+| .+++ +++++|++++.... .....+++.+|+
T Consensus 154 ~f~~v~~~~ef~~L~~~-------~l~~lL~~d~~l~v~~E----e~v~-eav~~W~~~d~~~r----~~~~~ll~~VR~ 217 (557)
T PHA02713 154 NIPTLITTDAFKKTVFE-------ILFDIISTNDNVYLYRE----GYKV-TILLKWLEYNYITE----EQLLCILSCIDI 217 (557)
T ss_pred HHHHHhCChhhhhCCHH-------HHHHHhccccccCCCcH----HHHH-HHHHHHHhcCHHHH----HHHhhhHhhhhH
Confidence 99999999999988766 33333 3345 456667 4666 99999999997542 224456666665
Q ss_pred HHH
Q 007949 562 LMQ 564 (583)
Q Consensus 562 ~~~ 564 (583)
+..
T Consensus 218 ~~l 220 (557)
T PHA02713 218 QNL 220 (557)
T ss_pred hhc
Confidence 543
No 4
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.95 E-value=9.9e-28 Score=258.28 Aligned_cols=214 Identities=21% Similarity=0.275 Sum_probs=186.9
Q ss_pred cchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCH
Q 007949 321 NGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSK 400 (583)
Q Consensus 321 l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~ 400 (583)
.........++.|+.++..+.+|||++.++++.|+|||.+||++|+||++||.+ ++.|+ ....|.+.++++
T Consensus 15 ~~~~h~~~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~--~l~e~-------~~~~i~l~~v~~ 85 (571)
T KOG4441|consen 15 TDPSHSKFLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTS--GLKES-------KQKEINLEGVDP 85 (571)
T ss_pred ccHHHHHHHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHHHHhcC--Ccccc-------cceEEEEecCCH
Confidence 445666778888999999999999999999999999999999999999999998 55554 567999999999
Q ss_pred HHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHH
Q 007949 401 ETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEV 480 (583)
Q Consensus 401 ~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~ 480 (583)
.+++.+++|+||+.+ .++.+++++|+.+|++||++.+.+.|++||.+++ +++||+.+..+|+.|++.+|.+.+..|
T Consensus 86 ~~l~~ll~y~Yt~~i-~i~~~nVq~ll~aA~~lQi~~v~~~C~~fL~~~l---~~~Nclgi~~~a~~~~~~~L~~~a~~~ 161 (571)
T KOG4441|consen 86 ETLELLLDYAYTGKL-EISEDNVQELLEAASLLQIPEVVDACCEFLESQL---DPSNCLGIRRFAELHSCTELLEVADEY 161 (571)
T ss_pred HHHHHHHHHhhcceE-EechHhHHHHHHHHHHhhhHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 999999999999999 8999999999999999999999999999999999 799999999999999999999999999
Q ss_pred HHhhHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHHhHHHHHH
Q 007949 481 IACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKRLE 560 (583)
Q Consensus 481 i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~~~~~~~~ 560 (583)
|.+||.++..+++|.+|+.+ .+..+ +.++++.+..| .+++ +++++|++++... |-.++..+++.+|
T Consensus 162 i~~~F~~v~~~eefl~L~~~----~l~~l--l~~d~l~v~~E----~~vf-~a~~~Wv~~d~~~---R~~~~~~ll~~vr 227 (571)
T KOG4441|consen 162 ILQHFAEVSKTEEFLLLSLE----ELIGL--LSSDDLNVDSE----EEVF-EAAMRWVKHDFEE---REEHLPALLEAVR 227 (571)
T ss_pred HHHHHHHHhccHHhhCCCHH----HHHhh--ccccCCCcCCH----HHHH-HHHHHHHhcCHhh---HHHHHHHHHHhcC
Confidence 99999999999999987665 22222 24555666666 3455 9999999999876 4456666777777
Q ss_pred H
Q 007949 561 M 561 (583)
Q Consensus 561 ~ 561 (583)
+
T Consensus 228 ~ 228 (571)
T KOG4441|consen 228 L 228 (571)
T ss_pred c
Confidence 4
No 5
>PHA02790 Kelch-like protein; Provisional
Probab=99.95 E-value=1.1e-27 Score=255.52 Aligned_cols=178 Identities=14% Similarity=0.206 Sum_probs=155.2
Q ss_pred cccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeec--CCCCHHHHHHHhhhhcCC
Q 007949 336 SDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE--HDLSKETFEKMIEYMYTD 413 (583)
Q Consensus 336 l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l--~~v~~~~~~~~l~~iYt~ 413 (583)
++.++.+|||++.+ |+.|+|||.|||+.|+||++||.+ +|.|+++ .|.+ .++++++|+.+|+|+|||
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~~HR~VLAa~S~YFraMF~~--~~~Es~~--------~v~~~~~~v~~~~l~~lldy~YTg 84 (480)
T PHA02790 16 LSMTKKFKTIIEAI-GGNIIVNSTILKKLSPYFRTHLRQ--KYTKNKD--------PVTRVCLDLDIHSLTSIVIYSYTG 84 (480)
T ss_pred HHhhhhhceEEEEc-CcEEeeehhhhhhcCHHHHHHhcC--Ccccccc--------ceEEEecCcCHHHHHHHHHhheee
Confidence 34557899998755 568999999999999999999998 7777632 3443 489999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCc--
Q 007949 414 GLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADS-- 491 (583)
Q Consensus 414 ~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~-- 491 (583)
++ .++.+++++++.+|++||++.+++.|++||.++| +++||+.++.+|+.|++.+|.+.|.+||.+||..|.++
T Consensus 85 ~l-~it~~nV~~ll~aA~~Lqi~~v~~~C~~fL~~~l---~~~NCl~i~~~A~~y~~~~L~~~a~~fi~~nF~~v~~~~~ 160 (480)
T PHA02790 85 KV-YIDSHNVVNLLRASILTSVEFIIYTCINFILRDF---RKEYCVECYMMGIEYGLSNLLCHTKDFIAKHFLELEDDII 160 (480)
T ss_pred eE-EEecccHHHHHHHHHHhChHHHHHHHHHHHHhhC---CcchHHHHHHHHHHhCHHHHHHHHHHHHHHhHHHHhcccc
Confidence 99 8999999999999999999999999999999999 89999999999999999999999999999999999986
Q ss_pred hhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHh
Q 007949 492 REFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEA 542 (583)
Q Consensus 492 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~ 542 (583)
++|..|+.. ..++++++.+.+| .+++ +++++|++++.
T Consensus 161 ~ef~~L~~~---------~lLssd~L~v~~E----e~V~-eav~~Wl~~~~ 197 (480)
T PHA02790 161 DNFDYLSMK---------LILESDELNVPDE----DYVV-DFVIKWYMKRR 197 (480)
T ss_pred hhhhhCCHH---------HhcccccCCCccH----HHHH-HHHHHHHHhhH
Confidence 899877542 2346677777788 4666 99999999853
No 6
>PHA03098 kelch-like protein; Provisional
Probab=99.94 E-value=3.5e-27 Score=257.19 Aligned_cols=194 Identities=18% Similarity=0.276 Sum_probs=168.9
Q ss_pred CCCCCcEEEEE--CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCC
Q 007949 339 VDDLADVCVRV--DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK 416 (583)
Q Consensus 339 ~~~~~Dv~~~~--~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~ 416 (583)
++.+|||++.+ +|++|+|||.+|+++|+||++||.+ +|. ...|.+++ ++++|+.+|+|+|||++
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~--~~~----------~~~i~l~~-~~~~~~~~l~y~Ytg~~- 71 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKN--NFK----------ENEINLNI-DYDSFNEVIKYIYTGKI- 71 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhC--CCC----------CceEEecC-CHHHHHHHHHHhcCCce-
Confidence 68899999998 9999999999999999999999998 554 24688998 99999999999999999
Q ss_pred CCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCchhHHH
Q 007949 417 DIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRA 496 (583)
Q Consensus 417 ~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~ 496 (583)
.++.+++.+|+.+|++|+++.|++.|+++|.+.+ +.+||+.++.+|..|++..|++.|.+||++||..+.++++|.+
T Consensus 72 ~i~~~~~~~ll~~A~~l~~~~l~~~C~~~l~~~l---~~~nc~~~~~~a~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~ 148 (534)
T PHA03098 72 NITSNNVKDILSIANYLIIDFLINLCINYIIKII---DDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIELIYNDPDFIY 148 (534)
T ss_pred EEcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHhHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCchhhc
Confidence 8999999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred HHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHHhHHHHHHHHH
Q 007949 497 MLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKRLEMLM 563 (583)
Q Consensus 497 l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (583)
|+.+ .+.. .++++++.+.+| .+++ +++++|+++++.. |......+++-+|+++
T Consensus 149 l~~~----~l~~--ll~~~~L~v~~E----~~v~-~av~~W~~~~~~~---r~~~~~~ll~~vR~~~ 201 (534)
T PHA03098 149 LSKN----ELIK--ILSDDKLNVSSE----DVVL-EIIIKWLTSKKNN---KYKDICLILKVLRITF 201 (534)
T ss_pred CCHH----HHHH--HhcCCCcCcCCH----HHHH-HHHHHHHhcChhh---hHhHHHHHHhhccccc
Confidence 8765 2111 235566667777 4666 9999999998754 3445556777777654
No 7
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.90 E-value=1.9e-24 Score=208.08 Aligned_cols=189 Identities=21% Similarity=0.346 Sum_probs=170.2
Q ss_pred HhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhc
Q 007949 332 AMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY 411 (583)
Q Consensus 332 ~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iY 411 (583)
.+..+..+..++||++++++++|+|||.|||+||+||++|+.+ +|.|+. ...|.+++-..++|+.+|+|||
T Consensus 34 ~~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFRAlLYg--Gm~Es~-------q~~ipLq~t~~eAF~~lLrYiY 104 (620)
T KOG4350|consen 34 SFDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFRALLYG--GMQESH-------QQLIPLQETNSEAFRALLRYIY 104 (620)
T ss_pred HHHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHHHHHhh--hhhhhh-------hcccccccccHHHHHHHHHHHh
Confidence 3445677799999999999999999999999999999999998 666664 4679999888999999999999
Q ss_pred CCCCC--CCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhh
Q 007949 412 TDGLK--DIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFA 489 (583)
Q Consensus 412 t~~~~--~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~ 489 (583)
||++. ....+..++.|.+|.+|++..|.....+|+++.+ ..+|++.++..|..|+.++|...|+.|..+|-..++
T Consensus 105 tg~~~l~~~~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL---~~~NvCmifdaA~ly~l~~Lt~~C~mfmDrnA~~lL 181 (620)
T KOG4350|consen 105 TGKIDLAGVEEDILLDYLSLAHRYGFIQLETAISEYLKEIL---KNENVCMIFDAAYLYQLTDLTDYCMMFMDRNADQLL 181 (620)
T ss_pred hcceecccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH---cccceeeeeeHHHHhcchHHHHHHHHHHhcCHHhhh
Confidence 99982 2345789999999999999999999999999999 799999999999999999999999999999999999
Q ss_pred CchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhh
Q 007949 490 DSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAE 544 (583)
Q Consensus 490 ~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~ 544 (583)
..++|..|+++ +++.+..++--..+| +.+| .|+.+|.++++.+
T Consensus 182 ~~~sFn~LSk~-------sL~e~l~RDsFfApE----~~IF-lAv~~W~~~Nske 224 (620)
T KOG4350|consen 182 EDPSFNRLSKD-------SLKELLARDSFFAPE----LKIF-LAVRSWHQNNSKE 224 (620)
T ss_pred cCcchhhhhHH-------HHHHHHhhhcccchH----HHHH-HHHHHHHhcCchh
Confidence 99999999998 666667778888889 8999 9999999998854
No 8
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.83 E-value=1.5e-20 Score=202.81 Aligned_cols=223 Identities=22% Similarity=0.354 Sum_probs=169.8
Q ss_pred CCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHHH
Q 007949 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (583)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (583)
+.+|||++.+++++|+|||.|||+.||||++||+++++|+.+..|.+.++++.++..+++|+|||.+.++.+++++++.+
T Consensus 34 ~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll~y~Yt~~i~i~~~nVq~ll~a 113 (571)
T KOG4441|consen 34 GLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLLDYAYTGKLEISEDNVQELLEA 113 (571)
T ss_pred CCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHHHHhhcceEEechHhHHHHHHH
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhchHHHHHHH--------H--HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcccCCC
Q 007949 248 CKVCKCESLQRII--------E--KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDH 317 (583)
Q Consensus 248 a~~~~~~~l~~~l--------~--~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 317 (583)
|..+|+..+.+.+ . ||+++..+|+.++|.+|...+..|+.+||. ++ ...++
T Consensus 114 A~~lQi~~v~~~C~~fL~~~l~~~Nclgi~~~a~~~~~~~L~~~a~~~i~~~F~---------------~v----~~~ee 174 (571)
T KOG4441|consen 114 ASLLQIPEVVDACCEFLESQLDPSNCLGIRRFAELHSCTELLEVADEYILQHFA---------------EV----SKTEE 174 (571)
T ss_pred HHHhhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH---------------HH----hccHH
Confidence 9777755554433 2 999999999999999999999999999974 22 24788
Q ss_pred ccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeee----ccCHHHHHHHcCccccccCCCCCCCCCCCee
Q 007949 318 NIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLA----SRSEYFKARLSRMKDFYEGKEGLPGDILPCI 393 (583)
Q Consensus 318 ~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~----~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i 393 (583)
|+.++.+++..++.+ + ++.+.-|...|.+--.|+. .|..++..++.. |
T Consensus 175 fl~L~~~~l~~ll~~-------d---~l~v~~E~~vf~a~~~Wv~~d~~~R~~~~~~ll~~------------------v 226 (571)
T KOG4441|consen 175 FLLLSLEELIGLLSS-------D---DLNVDSEEEVFEAAMRWVKHDFEEREEHLPALLEA------------------V 226 (571)
T ss_pred hhCCCHHHHHhhccc-------c---CCCcCCHHHHHHHHHHHHhcCHhhHHHHHHHHHHh------------------c
Confidence 999999999999877 5 5666555555555544432 244555555553 4
Q ss_pred ecCCCCHHHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHH
Q 007949 394 EEHDLSKETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRA 441 (583)
Q Consensus 394 ~l~~v~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~ 441 (583)
+++-+++..+...+. .+.+ .-....+.+++..|.+|++.+..+.
T Consensus 227 r~~ll~~~~l~~~v~---~~~~-~~~~~~c~~~l~ea~~~~~~~~~~~ 270 (571)
T KOG4441|consen 227 RLPLLPPQFLVEIVE---SEPL-IKRDSACRDLLDEAKKYHLLPQRRP 270 (571)
T ss_pred CccCCCHHHHHHHHh---hhhh-hccCHHHHHHHHHHHHHhhCcccCc
Confidence 555566555433222 2222 1223456666666666665554433
No 9
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=1.5e-20 Score=162.92 Aligned_cols=127 Identities=24% Similarity=0.285 Sum_probs=113.8
Q ss_pred cchhhhc-c-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCChhHHHHHHHhCCHHHHH
Q 007949 7 STIDAEL-D-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAAR 83 (583)
Q Consensus 7 ~~~~~~~-~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 83 (583)
.+++..+ . +..+|.+|+.|||| ||.||..|+.++|+.|+.+ |+++|..+..|.|+||||+..|+.++++
T Consensus 52 eiv~fLlsq~nv~~ddkDdaGWtP--------lhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaq 123 (226)
T KOG4412|consen 52 EIVYFLLSQPNVKPDDKDDAGWTP--------LHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQ 123 (226)
T ss_pred hHHHHHHhcCCCCCCCccccCCch--------hhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHH
Confidence 4555666 2 78899999999999 7999999999999999998 9999999999999999999999999999
Q ss_pred HHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 84 MLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 84 ~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+++|+.++++|..|.| +|.||. +.+++++|+..|+.++. ++..|.||||.|-..+|
T Consensus 124 lLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~--qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 124 LLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT--QDKYGFTPLHHALAEGH 184 (226)
T ss_pred HHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc--ccccCccHHHHHHhccC
Confidence 999999999999999998 588888 89999999999988888 79999999999944444
No 10
>PHA03098 kelch-like protein; Provisional
Probab=99.82 E-value=3e-20 Score=202.74 Aligned_cols=191 Identities=16% Similarity=0.238 Sum_probs=159.6
Q ss_pred CCCCCcEEEEE--CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHH
Q 007949 167 DSFPPDVVFYV--QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (583)
Q Consensus 167 ~~~~~Dv~~~v--~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (583)
++.+|||++.+ +|+.|+|||.||+++|+||++||.+++. +..|.+++ ++++|+.+|+|+|||++.++.+++.++
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~~~~---~~~i~l~~-~~~~~~~~l~y~Ytg~~~i~~~~~~~l 81 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKNNFK---ENEINLNI-DYDSFNEVIKYIYTGKINITSNNVKDI 81 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhCCCC---CceEEecC-CHHHHHHHHHHhcCCceEEcHHHHHHH
Confidence 35567999998 9999999999999999999999999888 46688888 999999999999999999999999999
Q ss_pred HHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhccc
Q 007949 245 VKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSN 314 (583)
Q Consensus 245 l~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 314 (583)
+.+|..++++.|++.+. ||+.++.+|..+++..|.+.|..|+..||. ++ ..
T Consensus 82 l~~A~~l~~~~l~~~C~~~l~~~l~~~nc~~~~~~a~~~~~~~L~~~~~~~i~~nf~---------------~v----~~ 142 (534)
T PHA03098 82 LSIANYLIIDFLINLCINYIIKIIDDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIE---------------LI----YN 142 (534)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhCCHhHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH---------------HH----hc
Confidence 99999999888776654 899999999999999999999999999874 11 24
Q ss_pred CCCccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeee----ccCHHHHHHHcCccccccCCCCCCCCCC
Q 007949 315 MDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLA----SRSEYFKARLSRMKDFYEGKEGLPGDIL 390 (583)
Q Consensus 315 ~~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~----~~S~~F~~~~~~~~~~~e~~~~~~~~~~ 390 (583)
.++|..++.+.+..+|.+ + ++.+..|...|.+...|+. .|..++..++..
T Consensus 143 ~~~f~~l~~~~l~~ll~~-------~---~L~v~~E~~v~~av~~W~~~~~~~r~~~~~~ll~~---------------- 196 (534)
T PHA03098 143 DPDFIYLSKNELIKILSD-------D---KLNVSSEDVVLEIIIKWLTSKKNNKYKDICLILKV---------------- 196 (534)
T ss_pred CchhhcCCHHHHHHHhcC-------C---CcCcCCHHHHHHHHHHHHhcChhhhHhHHHHHHhh----------------
Confidence 678999999999988877 5 5666666667777777663 355667777763
Q ss_pred CeeecCCCCHHHHHHHhh
Q 007949 391 PCIEEHDLSKETFEKMIE 408 (583)
Q Consensus 391 ~~i~l~~v~~~~~~~~l~ 408 (583)
|+++.++++.+..+..
T Consensus 197 --vR~~~~~~~~l~~~~~ 212 (534)
T PHA03098 197 --LRITFLSEEGIKKLKR 212 (534)
T ss_pred --ccccccCHHHHHHHHH
Confidence 7777788877776654
No 11
>PHA02790 Kelch-like protein; Provisional
Probab=99.81 E-value=1.6e-20 Score=200.52 Aligned_cols=174 Identities=14% Similarity=0.142 Sum_probs=138.0
Q ss_pred CCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEc--CCCCHHHHHHHhhhhcCCcccCChhhHHHHH
Q 007949 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR--EKLSYPALYGLIHFFYSDRLEIAVDDMEDLV 245 (583)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l--~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll 245 (583)
+.+|||++.+|+ .|+|||+|||+.||||++||++++.|+.. .+.+ .++++++++.+|+|+|||++.++.+|+++++
T Consensus 20 ~~~~~~~~~~~~-~~~~HR~VLAa~S~YFraMF~~~~~Es~~-~v~~~~~~v~~~~l~~lldy~YTg~l~it~~nV~~ll 97 (480)
T PHA02790 20 KKFKTIIEAIGG-NIIVNSTILKKLSPYFRTHLRQKYTKNKD-PVTRVCLDLDIHSLTSIVIYSYTGKVYIDSHNVVNLL 97 (480)
T ss_pred hhhceEEEEcCc-EEeeehhhhhhcCHHHHHHhcCCcccccc-ceEEEecCcCHHHHHHHHHhheeeeEEEecccHHHHH
Confidence 345699887665 89999999999999999999999998854 3443 4899999999999999999999999999999
Q ss_pred HHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcccC
Q 007949 246 KICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNM 315 (583)
Q Consensus 246 ~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 315 (583)
.+|..+|++.+.+.|. ||+.++.+|+.+++.+|.+.+.+|+.+||. ++. ....
T Consensus 98 ~aA~~Lqi~~v~~~C~~fL~~~l~~~NCl~i~~~A~~y~~~~L~~~a~~fi~~nF~---------------~v~--~~~~ 160 (480)
T PHA02790 98 RASILTSVEFIIYTCINFILRDFRKEYCVECYMMGIEYGLSNLLCHTKDFIAKHFL---------------ELE--DDII 160 (480)
T ss_pred HHHHHhChHHHHHHHHHHHHhhCCcchHHHHHHHHHHhCHHHHHHHHHHHHHHhHH---------------HHh--cccc
Confidence 9998888666655543 899999999999999999999999999975 111 0112
Q ss_pred CCccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHc
Q 007949 316 DHNIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLS 373 (583)
Q Consensus 316 ~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~ 373 (583)
++|..++. .++|++ + ++.+.-|...|.|...|+..+......++.
T Consensus 161 ~ef~~L~~---~~lLss-------d---~L~v~~Ee~V~eav~~Wl~~~~~~~~~l~~ 205 (480)
T PHA02790 161 DNFDYLSM---KLILES-------D---ELNVPDEDYVVDFVIKWYMKRRNRLGNLLL 205 (480)
T ss_pred hhhhhCCH---HHhccc-------c---cCCCccHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 56766764 344444 5 677777777888888888766555555554
No 12
>PHA02713 hypothetical protein; Provisional
Probab=99.81 E-value=3.8e-20 Score=200.53 Aligned_cols=174 Identities=20% Similarity=0.216 Sum_probs=143.3
Q ss_pred hhhcccccccCCCCCCCCCCCcEEEEEC-CEeEehhHHHHhhccHHHHHhhcCCCCCCc-ccEEEcCCCCHHHHHHHhhh
Q 007949 151 VVLGISGVTSNGASNSDSFPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETDWRYRN-EIRFSREKLSYPALYGLIHF 228 (583)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~~~~Dv~~~v~-~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~-~~~i~l~~v~~~~~~~lL~y 228 (583)
...++.++..++.+ |||++.|+ |+.|+|||+|||++|+||++||+++++|.. +..|.++++++++|+.+|+|
T Consensus 12 ~l~~l~~lr~~~~l------~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l~~v~~~~~~~ll~y 85 (557)
T PHA02713 12 VVSNISNLLDDDIL------CDVIITIGDGEEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNIVQY 85 (557)
T ss_pred HHHHHHHHHhCCCC------CCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEeccCCHHHHHHHHHH
Confidence 33455566666554 59999997 899999999999999999999999999764 67899999999999999999
Q ss_pred hcCCcccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCch
Q 007949 229 FYSDRLEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRL 298 (583)
Q Consensus 229 lYtg~~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l 298 (583)
+|||. ++.+++++++.+|..+|++.+++.|. ||+.++.++..+.+..|.+.+.+|+++||.
T Consensus 86 ~Yt~~--i~~~nv~~ll~aA~~lqi~~l~~~C~~~l~~~l~~~NCl~i~~~~~~~~~~~L~~~a~~~i~~~f~------- 156 (557)
T PHA02713 86 LYNRH--ISSMNVIDVLKCADYLLIDDLVTDCESYIKDYTNHDTCIYMYHRLYEMSHIPIVKYIKRMLMSNIP------- 156 (557)
T ss_pred hcCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHhhCCccchHHHHHHHHhccchHHHHHHHHHHHHHHH-------
Confidence 99997 68999999999998888777776554 899999988889998899999999999975
Q ss_pred hHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCCCc-EEEEECCEEEEeeeeee
Q 007949 299 PAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDLAD-VCVRVDKKIFRCHQVVL 361 (583)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~~D-v~~~~~~~~~~ahr~iL 361 (583)
++ ...++|..++.+.|.++|.+ + | +.+..|...|.|.-.|+
T Consensus 157 --------~v----~~~~ef~~L~~~~l~~lL~~-------d---~~l~v~~Ee~v~eav~~W~ 198 (557)
T PHA02713 157 --------TL----ITTDAFKKTVFEILFDIIST-------N---DNVYLYREGYKVTILLKWL 198 (557)
T ss_pred --------HH----hCChhhhhCCHHHHHHHhcc-------c---cccCCCcHHHHHHHHHHHH
Confidence 12 24688999999999999876 3 3 45555666666655554
No 13
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=2e-19 Score=155.91 Aligned_cols=118 Identities=23% Similarity=0.250 Sum_probs=109.5
Q ss_pred CCCCCCCC-CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhc-CCCc
Q 007949 16 IDLDASDF-SSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAIC 92 (583)
Q Consensus 16 ~din~~d~-~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~ 92 (583)
..+|.+++ +|+|| |||||..|+.+++.+|++ .+..+|.+|..||||||.|+..|+.++|+.|+.+ |+++
T Consensus 28 kSL~~r~dqD~Rt~--------LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~adv 99 (226)
T KOG4412|consen 28 KSLNARDDQDGRTP--------LHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADV 99 (226)
T ss_pred hhhhccccccCCce--------eeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCc
Confidence 46788877 99999 799999999999999995 7888999999999999999999999999999999 9999
Q ss_pred CccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 93 ~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|..+..|.| +||||. +.+|+++|+++|+.+.. ++..|.||||=|..-+.
T Consensus 100 na~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~--kD~~~qtplHRAAavGk 151 (226)
T KOG4412|consen 100 NATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI--KDKQGQTPLHRAAAVGK 151 (226)
T ss_pred ceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc--cccccCchhHHHHhccc
Confidence 999999999 699988 89999999999999888 89999999999986665
No 14
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.76 E-value=5.9e-19 Score=170.46 Aligned_cols=175 Identities=18% Similarity=0.208 Sum_probs=141.2
Q ss_pred hhhcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhc
Q 007949 151 VVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFY 230 (583)
Q Consensus 151 ~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylY 230 (583)
|..++..+.....++ ||+|+|++.+|||||+|||+||.||++|+.++|.|+.+..|+++....++|+.+|+|||
T Consensus 31 fS~~~~~l~~~e~y~------DVtfvve~~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~~ipLq~t~~eAF~~lLrYiY 104 (620)
T KOG4350|consen 31 FSQSFDELFTSEDYS------DVTFVVEDTRFPAHRVILAARSSYFRALLYGGMQESHQQLIPLQETNSEAFRALLRYIY 104 (620)
T ss_pred hhHHHHHHhhcCccc------ceEEEEeccccchhhhhHHHHHHHHHHHHhhhhhhhhhcccccccccHHHHHHHHHHHh
Confidence 345566677777777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccC---ChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCc
Q 007949 231 SDRLEI---AVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDR 297 (583)
Q Consensus 231 tg~~~i---~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~ 297 (583)
||++.+ ..+-..+++.+|.+++...|...+. |...+...|..+++++|...|..|.-+|-. +.
T Consensus 105 tg~~~l~~~~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL~~~NvCmifdaA~ly~l~~Lt~~C~mfmDrnA~----~l 180 (620)
T KOG4350|consen 105 TGKIDLAGVEEDILLDYLSLAHRYGFIQLETAISEYLKEILKNENVCMIFDAAYLYQLTDLTDYCMMFMDRNAD----QL 180 (620)
T ss_pred hcceecccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHcccceeeeeeHHHHhcchHHHHHHHHHHhcCHH----hh
Confidence 999865 4456789999999999776666544 445566789999999999999999987732 11
Q ss_pred hhHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeee
Q 007949 298 LPAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVL 361 (583)
Q Consensus 298 l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL 361 (583)
| ..+.|..++.+.|.+++.+ |..+-.+-+.|.|.+.|-
T Consensus 181 L---------------~~~sFn~LSk~sL~e~l~R-----------DsFfApE~~IFlAv~~W~ 218 (620)
T KOG4350|consen 181 L---------------EDPSFNRLSKDSLKELLAR-----------DSFFAPELKIFLAVRSWH 218 (620)
T ss_pred h---------------cCcchhhhhHHHHHHHHhh-----------hcccchHHHHHHHHHHHH
Confidence 1 3567888999999999988 555555555555554443
No 15
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.73 E-value=8.6e-18 Score=166.78 Aligned_cols=201 Identities=23% Similarity=0.243 Sum_probs=165.2
Q ss_pred HHHhcccccCCCCCcEEEEECC-----EEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHH
Q 007949 330 VEAMHISDHVDDLADVCVRVDK-----KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFE 404 (583)
Q Consensus 330 l~~l~~l~~~~~~~Dv~~~~~~-----~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~ 404 (583)
.+++..+++++..+|+.|.+++ ++++|||.+|+..|+.|.+||++ +|.+. ...+|.++++.+.+|.
T Consensus 102 ~er~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g--~~a~~-------~s~ei~lpdvepaaFl 172 (521)
T KOG2075|consen 102 RERQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYG--GLAED-------ASLEIRLPDVEPAAFL 172 (521)
T ss_pred HHhhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhcc--Ccccc-------cCceeecCCcChhHhH
Confidence 3445557888999999999973 67999999999999999999998 77775 3468999999999999
Q ss_pred HHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHH-HHhcCcHHHHHHHHHHHHh
Q 007949 405 KMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLIL-SDMYGVFKVREYCLEVIAC 483 (583)
Q Consensus 405 ~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~-A~~~~~~~L~~~c~~~i~~ 483 (583)
.+|+|+|++.+ .+..++++.++.+|++|.++.|.+.|.++|+.++ ...|.+..+-. |..++-++|.+.|++-|..
T Consensus 173 ~~L~flYsdev-~~~~dtvi~tl~~AkKY~VpaLer~CVkflr~~l---~~~naf~~L~q~A~lf~ep~Li~~c~e~id~ 248 (521)
T KOG2075|consen 173 AFLRFLYSDEV-KLAADTVITTLYAAKKYLVPALERQCVKFLRKNL---MADNAFLELFQRAKLFDEPSLISICLEVIDK 248 (521)
T ss_pred HHHHHHhcchh-hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc---CChHHHHHHHHHHHhhcCHHHHHHHHHHhhh
Confidence 99999999999 8999999999999999999999999999999998 56666655555 9999999999999999999
Q ss_pred hHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHH
Q 007949 484 NFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESAL 553 (583)
Q Consensus 484 nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~ 553 (583)
+|......++|.+.-.. .+.+..+..++...++| +.++ +++++|.+.......-+...+.
T Consensus 249 ~~~~al~~EGf~did~~-----~dt~~evl~r~~l~~~e----~~lf-eA~lkw~~~e~~rs~~~~~~~~ 308 (521)
T KOG2075|consen 249 SFEDALTPEGFCDIDST-----RDTYEEVLRRDTLEARE----FRLF-EAALKWAEAECQRSGGPVNGQN 308 (521)
T ss_pred HHHhhhCccceeehhhH-----HHHHHHHHhhcccchhH----HHHH-HHHHhhccCcchhhcCCCCccc
Confidence 99999999988766422 11222233355555667 7888 9999999888765444433333
No 16
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.68 E-value=1.1e-16 Score=164.70 Aligned_cols=120 Identities=20% Similarity=0.172 Sum_probs=112.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
|.++|..|++|.|+ |||||.+|+++++++|+++|+++|..+ ..|.||||||+++|+..++.+|+++||+++
T Consensus 68 g~~v~~~D~~g~tl--------LHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt 139 (600)
T KOG0509|consen 68 GESVNNPDREGVTL--------LHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPT 139 (600)
T ss_pred CcCCCCCCcCCccc--------eeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCc
Confidence 78899999999999 799999999999999999999999988 678999999999999999999999999999
Q ss_pred ccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
.+|.+|-+ .|.||. +.-++-+|+.++++++. ++..|.|||+.|.++++.
T Consensus 140 ~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~--~D~~grTpLmwAaykg~~ 191 (600)
T KOG0509|consen 140 LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL--RDNNGRTPLMWAAYKGFA 191 (600)
T ss_pred eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC--cCCCCCCHHHHHHHhccc
Confidence 99999998 588887 88889999999999888 899999999999988874
No 17
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.66 E-value=3.9e-16 Score=151.38 Aligned_cols=182 Identities=20% Similarity=0.260 Sum_probs=154.6
Q ss_pred ccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC--CCCHHHHHHHhhhhcC
Q 007949 335 ISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--DLSKETFEKMIEYMYT 412 (583)
Q Consensus 335 ~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~--~v~~~~~~~~l~~iYt 412 (583)
.++.++.-+||.+.+-|..++.|+..| ..|+||.+||++ .|+|++. ....++|+ .++..+|..++.-+|.
T Consensus 62 ~lf~q~enSDv~l~alg~eWrlHk~yL-~QS~yf~smf~G--tw~es~~-----~iIqleI~Dp~Id~~al~~a~gsLY~ 133 (488)
T KOG4682|consen 62 NLFLQGENSDVILEALGFEWRLHKPYL-FQSEYFKSMFSG--TWKESSM-----NIIQLEIPDPNIDVVALQVAFGSLYR 133 (488)
T ss_pred HHHhcCCCcceehhhccceeeeeeeee-eccHHHHHHhcc--ccChhhC-----ceEEEEcCCCcccHHHHHHHHhhhhh
Confidence 355568889999999999999999999 788999999998 8999976 33444444 5999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCch
Q 007949 413 DGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSR 492 (583)
Q Consensus 413 ~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~ 492 (583)
+++ .|..+.+..++.+|..++++++.+.|.+.+++.+ ++.|++.+|..|-.||...+++.|.+++..||..+....
T Consensus 134 dEv-eI~l~dv~gvlAaA~~lqldgl~qrC~evMie~l---spkta~~yYea~ckYgle~vk~kc~ewl~~nl~~i~~~q 209 (488)
T KOG4682|consen 134 DEV-EIKLSDVVGVLAAACLLQLDGLIQRCGEVMIETL---SPKTACGYYEAACKYGLESVKKKCLEWLLNNLMTIQNVQ 209 (488)
T ss_pred hhe-eccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhc---ChhhhhHhhhhhhhhhhHHHHHHHHHHHHHhhHhhhhHH
Confidence 999 8999999999999999999999999999999999 899999999999999999999999999999999998877
Q ss_pred hHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHH
Q 007949 493 EFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWL 538 (583)
Q Consensus 493 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl 538 (583)
-+.+++. .++..+ +.++++.+..-| ..++ ..+..|+
T Consensus 210 ~l~ei~~----~Lm~~l--l~SpnLfvmq~E---fdLy-ttlk~Wm 245 (488)
T KOG4682|consen 210 LLKEISI----NLMKQL--LGSPNLFVMQVE---FDLY-TTLKKWM 245 (488)
T ss_pred HHHhcCH----HHHHHH--hCCCCeEEEEee---ehHH-HHHHHHH
Confidence 5554444 343332 356777666633 5555 7778996
No 18
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.63 E-value=1.6e-15 Score=144.14 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=57.6
Q ss_pred cCCCCCCC-CCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCChhHHHHHHH--hCCHHHHHHHHhc
Q 007949 15 EIDLDASD-FSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACL--AGHLDAARMLLES 88 (583)
Q Consensus 15 ~~din~~d-~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~--~g~~~~v~~Ll~~ 88 (583)
|+++|.++ ..|+|| ||+|+.. ++.+++++|+++|+++|.+|..|.||||+|+. .++.+++++|+++
T Consensus 76 gadvn~~~~~~g~Tp--------Lh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~ 147 (209)
T PHA02859 76 GADVNFKTRDNNLSA--------LHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS 147 (209)
T ss_pred CCCCCccCCCCCCCH--------HHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 55555554 245555 4554432 24555555555555555555555555555443 2345555555555
Q ss_pred CCCcCccCCCCchH-HHHHh---hHHHHHHHHhCCCCCCCCCCcccCCccchhcc
Q 007949 89 GAICSEHTFDGDRC-HYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 89 ga~~~~~~~~g~t~-~~aa~---~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~ 139 (583)
|++++.+|..|.|| |.++. +.+++++|+++|++++. ++..|.|||++|.
T Consensus 148 gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~--~d~~g~tpl~la~ 200 (209)
T PHA02859 148 GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE--TNKSGYNCYDLIK 200 (209)
T ss_pred CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHh
Confidence 55555555555552 32222 44555555555555444 4455555555544
No 19
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.63 E-value=7.9e-16 Score=158.57 Aligned_cols=128 Identities=18% Similarity=0.159 Sum_probs=113.5
Q ss_pred cchhhhcc-cCCCCCCC-CCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHH
Q 007949 7 STIDAELD-EIDLDASD-FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d-~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 84 (583)
-+....+. |+|+|+.+ .-|.|| |||||++|++.+|..|+++||+++.+|..|.+|+|+|+..||.-++-+
T Consensus 92 ~v~r~li~~gadvn~~gG~l~stP--------LHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vay 163 (600)
T KOG0509|consen 92 DVARYLISHGADVNAIGGVLGSTP--------LHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAY 163 (600)
T ss_pred HHHHHHHHcCCCccccCCCCCCCc--------chHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHH
Confidence 44555665 99999998 777899 799999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 85 Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+..|++++.+|.+|+| +|+||. ....+..|+..++.+... .+..|.||||.|+..+.
T Consensus 164 ll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~-d~~~g~TpLHwa~~~gN 224 (600)
T KOG0509|consen 164 LLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT-DDNHGNTPLHWAVVGGN 224 (600)
T ss_pred HHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc-ccccCCchHHHHHhcCC
Confidence 99999999999999999 688888 333388999999988873 34889999999998766
No 20
>PHA02946 ankyin-like protein; Provisional
Probab=99.62 E-value=1.8e-15 Score=160.03 Aligned_cols=159 Identities=14% Similarity=0.066 Sum_probs=126.8
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCC--HHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH--LDAARM 84 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~--~~~v~~ 84 (583)
+++..+. |+++|.+|..|+|| ||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..++ .+++++
T Consensus 54 iv~~Ll~~Gadvn~~d~~G~Tp--------Lh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~l 125 (446)
T PHA02946 54 FVEELLHRGYSPNETDDDGNYP--------LHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINL 125 (446)
T ss_pred HHHHHHHCcCCCCccCCCCCCH--------HHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 4555555 89999999999999 799999999999999999999999999999999999988664 789999
Q ss_pred HHhcCCCcCc-cCCCCchHHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccccchhhhhhhcccccccC
Q 007949 85 LLESGAICSE-HTFDGDRCHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSN 161 (583)
Q Consensus 85 Ll~~ga~~~~-~~~~g~t~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~~ 161 (583)
|+++|++++. .+..|.||+++|. +.+++++|++.|++++. .+..|.||||.|+..++...+.-. -|...
T Consensus 126 Ll~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~--~d~~G~t~Lh~A~~~~~~~~~~v~------~Ll~~ 197 (446)
T PHA02946 126 LVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARI--VDKFGKNHIHRHLMSDNPKASTIS------WMMKL 197 (446)
T ss_pred HHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccc--cCCCCCCHHHHHHHhcCCCHHHHH------HHHHc
Confidence 9999999995 5888998766665 78999999999999887 788999999999875553222111 11111
Q ss_pred CCCCCCCCCCcEEEEECCEeEehhHHHHh
Q 007949 162 GASNSDSFPPDVVFYVQGRPIEAHRVILS 190 (583)
Q Consensus 162 ~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~ 190 (583)
++|+...-.....|.|-++..
T Consensus 198 --------Gadin~~d~~G~TpLH~Aa~~ 218 (446)
T PHA02946 198 --------GISPSKPDHDGNTPLHIVCSK 218 (446)
T ss_pred --------CCCCcccCCCCCCHHHHHHHc
Confidence 235555555566788876653
No 21
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.61 E-value=4.8e-16 Score=132.28 Aligned_cols=106 Identities=33% Similarity=0.538 Sum_probs=90.1
Q ss_pred ccccCCCCCcEEEEEC-CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCC
Q 007949 335 ISDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTD 413 (583)
Q Consensus 335 ~l~~~~~~~Dv~~~~~-~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~ 413 (583)
.+++++.++|+++.++ +..|+|||.+|+++|+||+.||.+. .+.+. ....|.++++++++|+.+++|+|++
T Consensus 3 ~~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~-~~~~~-------~~~~i~~~~~~~~~~~~~l~~~Y~~ 74 (111)
T PF00651_consen 3 DLFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGS-KFKES-------TVPEISLPDVSPEAFEAFLEYMYTG 74 (111)
T ss_dssp HHHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTT-TSTTS-------SEEEEEETTSCHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCEEEEECCCEEEeechhhhhccchhhhhccccc-ccccc-------cccccccccccccccccccccccCC
Confidence 3455589999999999 8999999999999999999999972 13332 3347899999999999999999999
Q ss_pred CCCCCC-HHhHHHHHHHHhccCchHHHHHHHHHHHhh
Q 007949 414 GLKDID-PDQAEEMFDAASRYLLFPLKRAVADVLLLH 449 (583)
Q Consensus 414 ~~~~i~-~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 449 (583)
.+ .++ .+++.+++.+|++|+++.|++.|..+|.++
T Consensus 75 ~~-~~~~~~~~~~ll~lA~~~~~~~L~~~~~~~l~~~ 110 (111)
T PF00651_consen 75 EI-EINSDENVEELLELADKLQIPELKKACEKFLQES 110 (111)
T ss_dssp EE-EEE-TTTHHHHHHHHHHTTBHHHHHHHHHHHHHH
T ss_pred cc-cCCHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhC
Confidence 98 677 899999999999999999999999999764
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.61 E-value=2e-15 Score=162.45 Aligned_cols=154 Identities=17% Similarity=0.111 Sum_probs=125.3
Q ss_pred chhhhcc-cCCCCCCCCC-CCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFS-SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~-g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
++...++ |+++|..|.. |+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tp--------Lh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~L 220 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTA--------LHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHIL 220 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCH--------HHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 3444455 8999999999 9999 7999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh---hHHHHHHHHhCCCCCCCCCCc-ccCCccchhccccccccchhhhhhhccccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPL-QAALRDTFLGCGANRQFLEEAEVVLGISGVTS 160 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~---~~~i~~~L~~~~~~~~~~~~~-~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~ 160 (583)
+++|++++.+|..|.| +|+|+. +.+++++|+++|++++. ++ ..|.||||.|+... +.. .-|+.
T Consensus 221 l~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~--~~~~~g~TpLh~A~~~~-~~v---------~~Ll~ 288 (477)
T PHA02878 221 LENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA--KSYILGLTALHSSIKSE-RKL---------KLLLE 288 (477)
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc--cCCCCCCCHHHHHccCH-HHH---------HHHHH
Confidence 9999999999999999 577774 68999999999999887 44 37999999995321 111 11222
Q ss_pred CCCCCCCCCCCcEEEEECCEeEehhHHHH
Q 007949 161 NGASNSDSFPPDVVFYVQGRPIEAHRVIL 189 (583)
Q Consensus 161 ~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL 189 (583)
. ++|+..+-.....|.|.++.
T Consensus 289 ~--------gadin~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 289 Y--------GADINSLNSYKLTPLSSAVK 309 (477)
T ss_pred C--------CCCCCCcCCCCCCHHHHHHH
Confidence 1 23666665556677776654
No 23
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.61 E-value=4.7e-15 Score=157.63 Aligned_cols=126 Identities=24% Similarity=0.284 Sum_probs=115.1
Q ss_pred hhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh
Q 007949 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 9 ~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
+...+. |+++|.+|..|.|| ||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 107 i~~ll~~g~d~n~~~~~g~T~--------Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~ 178 (434)
T PHA02874 107 IKTILDCGIDVNIKDAELKTF--------LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLE 178 (434)
T ss_pred HHHHHHCcCCCCCCCCCCccH--------HHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 344444 88999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 88 SGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 88 ~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
+|++++..+..|.| +|+|+. +.+++++|++.|+++.. ++..|.||||.|+..++.
T Consensus 179 ~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~--~~~~g~TpL~~A~~~~~~ 236 (434)
T PHA02874 179 KGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN--KCKNGFTPLHNAIIHNRS 236 (434)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC--CCCCCCCHHHHHHHCChH
Confidence 99999999999998 577777 89999999999998877 678999999999987664
No 24
>PHA02791 ankyrin-like protein; Provisional
Probab=99.61 E-value=3.2e-15 Score=147.49 Aligned_cols=147 Identities=13% Similarity=0.080 Sum_probs=88.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCc-h-HHHHHh--hHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGD-R-CHYAAL--NLKVR 112 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-t-~~~aa~--~~~i~ 112 (583)
||+|+..|+.++++.|+..|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+ | +|+|+. +.+++
T Consensus 65 Lh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eiv 144 (284)
T PHA02791 65 LHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIV 144 (284)
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHH
Confidence 6777777777777777777777777777777777777777777777777777777777666664 4 355555 66777
Q ss_pred HHHHhCCCCCCCCCCcccCCccchhccccccc-cchhhhhhhcccccccCCCCCCCCCCCcEEEEEC-CEeEehhHHHHh
Q 007949 113 KLLKAYEARPPPLGPLQAALRDTFLGCGANRQ-FLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQ-GRPIEAHRVILS 190 (583)
Q Consensus 113 ~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~-~~~~~~Hk~iL~ 190 (583)
++|++++.+.. ....|.||||.|+..++. ..+- |+.- ++|+-..-. |..-+.|-++-.
T Consensus 145 k~LL~~~~~~~---d~~~g~TpLh~Aa~~g~~eiv~l---------LL~~--------gAd~n~~d~~g~t~~L~~Aa~~ 204 (284)
T PHA02791 145 SYFLSEIPSTF---DLAILLSCIHITIKNGHVDMMIL---------LLDY--------MTSTNTNNSLLFIPDIKLAIDN 204 (284)
T ss_pred HHHHhcCCccc---ccccCccHHHHHHHcCCHHHHHH---------HHHC--------CCCCCcccCCCCChHHHHHHHc
Confidence 77777654321 012367777777766662 1111 1111 113322222 222236777777
Q ss_pred hccHHHHHhhcCC
Q 007949 191 ARSVFFRRKFETD 203 (583)
Q Consensus 191 a~S~~f~~~~~~~ 203 (583)
.+....+-++..+
T Consensus 205 ~~~e~v~lLl~~G 217 (284)
T PHA02791 205 KDLEMLQALFKYD 217 (284)
T ss_pred CCHHHHHHHHHCC
Confidence 6777777777543
No 25
>PHA02741 hypothetical protein; Provisional
Probab=99.61 E-value=3.4e-15 Score=137.03 Aligned_cols=117 Identities=17% Similarity=0.110 Sum_probs=103.5
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCChhHHHHHHHhCC----HHHHHHHH
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE------SGVNVNARDQWDSVALYYACLAGH----LDAARMLL 86 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~g~----~~~v~~Ll 86 (583)
.++.+|..|.|| ||+|+..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+
T Consensus 13 ~~~~~~~~g~t~--------Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll 84 (169)
T PHA02741 13 MIAEKNSEGENF--------FHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLI 84 (169)
T ss_pred HhhccccCCCCH--------HHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHH
Confidence 366788899999 899999999999998854 368899999999999999999999 58899999
Q ss_pred hcCCCcCccCC-CCch-HHHHHh--hHHHHHHHHh-CCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTF-DGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~-~g~t-~~~aa~--~~~i~~~L~~-~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++.++. .|.| +|+|+. +.+++++|+. .|++++. .+..|.||||+|+..++
T Consensus 85 ~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~--~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 85 ELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF--CNADNKSPFELAIDNED 144 (169)
T ss_pred HcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc--CCCCCCCHHHHHHHCCC
Confidence 99999999985 8998 577777 8999999997 5888777 68899999999998877
No 26
>PHA02791 ankyrin-like protein; Provisional
Probab=99.60 E-value=4.6e-15 Score=146.41 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=106.6
Q ss_pred hhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCh-hHHHHHHHhCCHHHHHHHH
Q 007949 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDS-VALYYACLAGHLDAARMLL 86 (583)
Q Consensus 9 ~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~-t~L~~A~~~g~~~~v~~Ll 86 (583)
+...+. |+++|.+|..|+|| ||+|+..|+.++++.|+++|++++.++..|+ ||||+|+..|+.+++++|+
T Consensus 77 V~lLL~~Gadvn~~d~~G~Tp--------Lh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL 148 (284)
T PHA02791 77 VKILLFSGMDDSQFDDKGNTA--------LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL 148 (284)
T ss_pred HHHHHHCCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHH
Confidence 334444 88999999999999 8999999999999999999999999998885 9999999999999999999
Q ss_pred hcCCCcCccC-CCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCcc-chhcccccc
Q 007949 87 ESGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRD-TFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~-~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~-L~~A~~~~~ 143 (583)
++|.+. .+ ..|.| +|+|+. +.+++++|+++|++++. ++..|.|| ||.|+..++
T Consensus 149 ~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~--~d~~g~t~~L~~Aa~~~~ 206 (284)
T PHA02791 149 SEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNT--NNSLLFIPDIKLAIDNKD 206 (284)
T ss_pred hcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCc--ccCCCCChHHHHHHHcCC
Confidence 987643 23 24777 588887 89999999999999887 67788877 999998887
No 27
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.60 E-value=2.4e-15 Score=132.15 Aligned_cols=150 Identities=21% Similarity=0.297 Sum_probs=126.1
Q ss_pred cccccCCCCCcEEEEEC---CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhh
Q 007949 334 HISDHVDDLADVCVRVD---KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYM 410 (583)
Q Consensus 334 ~~l~~~~~~~Dv~~~~~---~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~i 410 (583)
..+...+.|||+++.+. ++.++|||.+|++||++++ |.+ +-.| ......+.++++++|...++||
T Consensus 58 adL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN--~~de--------kse~~~~dDad~Ea~~t~iRWI 125 (280)
T KOG4591|consen 58 ADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFWK--FAN--GGDE--------KSEELDLDDADFEAFHTAIRWI 125 (280)
T ss_pred HHHhhcccccceeEEecCCccccCchhhhhhhhhcchhh--hcc--CCCc--------chhhhcccccCHHHHHHhheee
Confidence 34555699999999998 5779999999999999886 333 1111 2345778899999999999999
Q ss_pred cCCCCCCC--CHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHh
Q 007949 411 YTDGLKDI--DPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETF 488 (583)
Q Consensus 411 Yt~~~~~i--~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v 488 (583)
||+++ ++ ......++...|+.|+++.|+..|+.-+...+ +++||+.+|++|+..++..|...|.+.|+.++..+
T Consensus 126 YTDEi-dfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~a~l---~V~NCIk~Ye~AEe~n~~qL~n~~~eiIA~~W~dL 201 (280)
T KOG4591|consen 126 YTDEI-DFKEDDEFLLELCELANRFQLELLKERCEKGLGALL---HVDNCIKFYEFAEELNARQLMNVAAEIIAGAWDDL 201 (280)
T ss_pred ecccc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh---hHhhHHHHHHHHHHhhHHHHHHHHHHHHHhhcccc
Confidence 99998 44 45678999999999999999999999999998 79999999999999999999999999999998876
Q ss_pred hCchhHHHHHhc
Q 007949 489 ADSREFRAMLLT 500 (583)
Q Consensus 489 ~~~~~f~~l~~~ 500 (583)
- ...|.+++..
T Consensus 202 ~-~a~FaqMs~a 212 (280)
T KOG4591|consen 202 G-KADFAQMSAA 212 (280)
T ss_pred C-hHHHHhccHH
Confidence 4 3567766554
No 28
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.60 E-value=4.2e-15 Score=146.56 Aligned_cols=118 Identities=18% Similarity=0.124 Sum_probs=105.0
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC----CCChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD----QWDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d----~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
+-.+|+.|+||+ ||.|+..|+.++++.|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++
T Consensus 25 ~~~~d~~~~~~l-------L~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN 97 (300)
T PHA02884 25 IKKKNKICIANI-------LYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN 97 (300)
T ss_pred hhccCcCCCCHH-------HHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC
Confidence 456889999996 899999999999999999999999874 589999999999999999999999999999
Q ss_pred cc-CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 94 EH-TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 94 ~~-~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
.. +..|.| +|.|+. +.+++++|+.+|++++. ++..|.||||.|+..++.
T Consensus 98 ~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~--kd~~G~TpL~~A~~~~~~ 150 (300)
T PHA02884 98 RYAEEAKITPLYISVLHGCLKCLEILLSYGADINI--QTNDMVTPIELALMICNN 150 (300)
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHhCCh
Confidence 86 457888 576666 89999999999999988 788999999999875553
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.58 E-value=8.1e-15 Score=158.23 Aligned_cols=173 Identities=17% Similarity=0.175 Sum_probs=116.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHH--HcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC--CHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEAS--RAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDA 81 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~--~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~~ 81 (583)
.++...++ |+++|..|..|.|| ||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.++
T Consensus 87 ~iv~~Ll~~ga~i~~~d~~g~tp--------L~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~i 158 (480)
T PHA03100 87 EIVKLLLEYGANVNAPDNNGITP--------LLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKI 158 (480)
T ss_pred HHHHHHHHCCCCCCCCCCCCCch--------hhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHH
Confidence 34444454 77888888888888 68888 888888888888888888888888888888888888 7888
Q ss_pred HHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccC------Cccchhccccccccchhhhhh
Q 007949 82 ARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA------LRDTFLGCGANRQFLEEAEVV 152 (583)
Q Consensus 82 v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~------~t~L~~A~~~~~~~l~~~~~~ 152 (583)
+++|+++|++++..+..|.| +|+|+. +.+++++|+++|+++.. .+..| .||||.|+..++...+--..
T Consensus 159 v~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~- 235 (480)
T PHA03100 159 LKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINA--GDIETLLFTIFETPLHIAACYNEITLEVVNY- 235 (480)
T ss_pred HHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC--CCCCCCcHHHHHhHHHHHHHhCcCcHHHHHH-
Confidence 88888888888888877777 466665 67788888888877666 45555 77788887766621111111
Q ss_pred hcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCC
Q 007949 153 LGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETD 203 (583)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~ 203 (583)
|+..+ +|+...-.....|.|.++....-..++.++..+
T Consensus 236 -----Ll~~g--------~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g 273 (480)
T PHA03100 236 -----LLSYG--------VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG 273 (480)
T ss_pred -----HHHcC--------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 11111 133222233445677777666666666666544
No 30
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=2.2e-15 Score=148.91 Aligned_cols=118 Identities=22% Similarity=0.378 Sum_probs=107.7
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+++|..+.-..|| |-.||-.|+.+++++|+++|+|++..|..|.|.||+||..||.+++++|++.|+|+|.
T Consensus 107 ga~VN~tT~TNStP--------LraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ 178 (615)
T KOG0508|consen 107 GASVNDTTRTNSTP--------LRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA 178 (615)
T ss_pred cCccccccccCCcc--------HHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch
Confidence 78899888888889 6889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++..|+| +|.+|. +.+++++|+.+|+.... +..|-|||..|...++
T Consensus 179 ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~---d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 179 KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV---DGHGMTPLLLAAVTGH 227 (615)
T ss_pred hcccCchHHHhhhhcccHHHHHHHHhCCceeee---cCCCCchHHHHhhhcc
Confidence 9999999 788887 89999999999998776 6679999999998888
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.57 E-value=1e-14 Score=156.99 Aligned_cols=125 Identities=19% Similarity=0.212 Sum_probs=112.6
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHh-CCHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-GHLDAARM 84 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-g~~~~v~~ 84 (583)
.++...+. |+++|..|..|+|| ||+|+..|+.++++.|++.|++++.+|..|+||||+|+.. ++.+++++
T Consensus 182 ~iv~~Ll~~gad~n~~d~~g~tp--------Lh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~ 253 (477)
T PHA02878 182 RLTELLLSYGANVNIPDKTNNSP--------LHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKL 253 (477)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCH--------HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHH
Confidence 44555565 89999999999999 8999999999999999999999999999999999999975 78999999
Q ss_pred HHhcCCCcCccCC-CCchH-HHHHhhHHHHHHHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 85 LLESGAICSEHTF-DGDRC-HYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 85 Ll~~ga~~~~~~~-~g~t~-~~aa~~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
|+++|++++..+. .|.|| |.|+.+.+++++|+++|++++. .+..|.||||.|+..
T Consensus 254 Ll~~gadvn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~--~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 254 LLEHGVDVNAKSYILGLTALHSSIKSERKLKLLLEYGADINS--LNSYKLTPLSSAVKQ 310 (477)
T ss_pred HHHcCCCCCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHH
Confidence 9999999999886 78885 6665589999999999999988 789999999999963
No 32
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.57 E-value=1.4e-14 Score=123.12 Aligned_cols=96 Identities=27% Similarity=0.433 Sum_probs=85.0
Q ss_pred CCCcEEEEEC-CEeEehhHHHHhhccHHHHHhhcCC-CCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCC-hhhHHHHH
Q 007949 169 FPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIA-VDDMEDLV 245 (583)
Q Consensus 169 ~~~Dv~~~v~-~~~~~~Hk~iL~a~S~~f~~~~~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~-~~~~~~ll 245 (583)
.++|++|.++ +..|+|||.||+++|+||+.+|.+. +.+.+...+.++++++++|..+++|+|+|.+.++ .+++.+++
T Consensus 9 ~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~~ll 88 (111)
T PF00651_consen 9 EFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGSKFKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINSDENVEELL 88 (111)
T ss_dssp TS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-TTTHHHHH
T ss_pred CCCCEEEEECCCEEEeechhhhhccchhhhhcccccccccccccccccccccccccccccccccCCcccCCHHHHHHHHH
Confidence 4569999999 8999999999999999999999998 6777777899999999999999999999999998 99999999
Q ss_pred HHHhHhchHHHHHHHHHHH
Q 007949 246 KICKVCKCESLQRIIEKEL 264 (583)
Q Consensus 246 ~~a~~~~~~~l~~~l~~~l 264 (583)
.+|+.++++.|.+.+.+.+
T Consensus 89 ~lA~~~~~~~L~~~~~~~l 107 (111)
T PF00651_consen 89 ELADKLQIPELKKACEKFL 107 (111)
T ss_dssp HHHHHTTBHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHH
Confidence 9999999999888887543
No 33
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.56 E-value=1.4e-14 Score=153.10 Aligned_cols=170 Identities=14% Similarity=0.115 Sum_probs=112.5
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCc------------------------
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA------------------------ 61 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------ 61 (583)
-++...++ |+++|..+..|.|| ||+|+..|+.+++++|+++|++++.
T Consensus 16 ~iv~~Ll~~g~~~n~~~~~g~tp--------L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~L 87 (413)
T PHA02875 16 DIARRLLDIGINPNFEIYDGISP--------IKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEEL 87 (413)
T ss_pred HHHHHHHHCCCCCCccCCCCCCH--------HHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHH
Confidence 34455555 78888888888888 4555555555555555555544332
Q ss_pred ----------cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCc
Q 007949 62 ----------RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL 128 (583)
Q Consensus 62 ----------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~ 128 (583)
.+..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++
T Consensus 88 l~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~--~d 165 (413)
T PHA02875 88 LDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI--ED 165 (413)
T ss_pred HHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--CC
Confidence 3456888888888888888888888888888888888887 566666 78888888888888776 67
Q ss_pred ccCCccchhccccccc-cchhhhhhhcccccccCCCCCCCCCCCcEEEEE-CCEeEehhHHHHhhccHHHHHhhcCC
Q 007949 129 QAALRDTFLGCGANRQ-FLEEAEVVLGISGVTSNGASNSDSFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETD 203 (583)
Q Consensus 129 ~~~~t~L~~A~~~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~ 203 (583)
..|.||||+|+..++. .++. |+.. ++|+.... .|...+.|-++-..+....+-++..+
T Consensus 166 ~~g~TpL~~A~~~g~~eiv~~---------Ll~~--------ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g 225 (413)
T PHA02875 166 CCGCTPLIIAMAKGDIAICKM---------LLDS--------GANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG 225 (413)
T ss_pred CCCCCHHHHHHHcCCHHHHHH---------HHhC--------CCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC
Confidence 7888888888876652 1111 2111 12443332 33345666666666666666666543
No 34
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.56 E-value=9.6e-15 Score=135.72 Aligned_cols=115 Identities=23% Similarity=0.235 Sum_probs=107.5
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
..|+|..|+.|.+| ||+||+.|+..+++.|+.+|+.+|..+....||||+|+..||.++++.|+.+.+|+|+
T Consensus 24 ehdln~gddhgfsp--------lhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna 95 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSP--------LHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA 95 (448)
T ss_pred ccccccccccCcch--------hhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch
Confidence 46789999999999 7999999999999999999999999999899999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~ 139 (583)
.+..|+| +||+|. ...+.+=|+..|+.+++ .++.|.|||..|-
T Consensus 96 vnehgntplhyacfwgydqiaedli~~ga~v~i--cnk~g~tpldkak 141 (448)
T KOG0195|consen 96 VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNI--CNKKGMTPLDKAK 141 (448)
T ss_pred hhccCCCchhhhhhhcHHHHHHHHHhccceeee--cccCCCCchhhhc
Confidence 9999998 699998 77788999999999988 6899999998764
No 35
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.56 E-value=1.4e-14 Score=125.05 Aligned_cols=107 Identities=27% Similarity=0.250 Sum_probs=97.2
Q ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchH-HHHHh--hH
Q 007949 34 NGDVFEASRAGDVDRLRYILESGVN-VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NL 109 (583)
Q Consensus 34 ~~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~-~~aa~--~~ 109 (583)
...+.+|+..|....|+.|++..++ +|.+|.+|+||||-|+++||.++++.|+..||+++.+...|+|| |-|+. +.
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccch
Confidence 3458899999999999999997776 89999999999999999999999999999999999999999995 66555 89
Q ss_pred HHHHHHHhCCCCCCCCCCcccCCccchhccccc
Q 007949 110 KVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (583)
Q Consensus 110 ~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~ 142 (583)
+++..|+++|++++. ......||||+||...
T Consensus 144 ~va~~LLqhgaDVnA--~t~g~ltpLhlaa~~r 174 (228)
T KOG0512|consen 144 EVAGRLLQHGADVNA--QTKGLLTPLHLAAGNR 174 (228)
T ss_pred hHHHHHHhccCcccc--cccccchhhHHhhccc
Confidence 999999999999998 5777889999999654
No 36
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.55 E-value=5.1e-15 Score=132.54 Aligned_cols=120 Identities=19% Similarity=0.210 Sum_probs=111.8
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
..-+|..|+.|.|| |+||+..|++++|++|+..|++++...+...|+|.+|+..|..+++++|+.++.|+|.
T Consensus 150 ~n~VN~~De~GfTp--------LiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv 221 (296)
T KOG0502|consen 150 NNKVNACDEFGFTP--------LIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV 221 (296)
T ss_pred hccccCccccCchH--------hHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce
Confidence 56689999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
.|++|.| +.+|++ +.++++.|++.|+++.. .++.|.+++.+|+.-+-.
T Consensus 222 yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~--e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 222 YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ--EDDSGYWIMDLAVALGYR 272 (296)
T ss_pred eccCCCceeeeeecCChHHHHHHHHhcCCCccc--ccccCCcHHHHHHHhhhH
Confidence 9999999 577777 89999999999999888 789999999999976554
No 37
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.55 E-value=1.4e-14 Score=158.59 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=41.7
Q ss_pred CCCCCC-CCCCCCCCCCCCcHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCC--HHHHHHHHhcCC
Q 007949 16 IDLDAS-DFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH--LDAARMLLESGA 90 (583)
Q Consensus 16 ~din~~-d~~g~tpl~~~~~~~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~--~~~v~~Ll~~ga 90 (583)
+|+|.+ |..|.|| ||+|+. .++.+++++|+++|+++|.+|..|+||||+|+..|+ .+++++|+++||
T Consensus 167 ADIN~~~d~~G~Tp--------LH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GA 238 (764)
T PHA02716 167 VNLNYVCKKTGYGI--------LHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGG 238 (764)
T ss_pred CCcccccCCCCCcH--------HHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCC
Confidence 555555 5555555 454432 234555555555555555555555555555555553 255555555555
Q ss_pred CcCccCCCCch
Q 007949 91 ICSEHTFDGDR 101 (583)
Q Consensus 91 ~~~~~~~~g~t 101 (583)
+++.++..|.|
T Consensus 239 DVN~kD~~G~T 249 (764)
T PHA02716 239 DMDMKCVNGMS 249 (764)
T ss_pred CCCCCCCCCCC
Confidence 55555555555
No 38
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.55 E-value=1.5e-14 Score=132.27 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=102.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCH----HHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHH---HHHHHh
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDV----DRLRYILESGVNVNARDQWDSVALYYACLAGHLDA---ARMLLE 87 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~---v~~Ll~ 87 (583)
|++++..+..+.++ +|+||+.|+. ++++.|++.|+.++.+|..|+||||+|+..|+.+. +++|++
T Consensus 10 ~~~~~~~~~~~~~~--------l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~ 81 (166)
T PHA02743 10 NLGAVEIDEDEQNT--------FLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVN 81 (166)
T ss_pred chHHhhhccCCCcH--------HHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHH
Confidence 56777788888888 7999999998 55667778899999999999999999999988654 789999
Q ss_pred cCCCcCccC-CCCch-HHHHHh--hHHHHHHHHh-CCCCCCCCCCcccCCccchhcccccc
Q 007949 88 SGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 88 ~ga~~~~~~-~~g~t-~~~aa~--~~~i~~~L~~-~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|++++.++ ..|.| +|+++. +.+++++|+. .|+++.. ++..|.||||+|+..++
T Consensus 82 ~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 82 MGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA--INYQHETAYHIAYKMRD 140 (166)
T ss_pred cCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC--cCCCCCCHHHHHHHcCC
Confidence 999999998 47988 588877 8899999995 7888877 68899999999998776
No 39
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.54 E-value=3.5e-14 Score=134.87 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=98.6
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcC--CHHHHHHHHHcCCCCCccC-CCChhHHHHHHHh---CCHHHHHHHHhcCCC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARD-QWDSVALYYACLA---GHLDAARMLLESGAI 91 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g--~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~ 91 (583)
+|..|..|.|| ||+|+..+ +.+++++|+++|+++|.++ ..|+||||+|+.. ++.+++++|+++|++
T Consensus 44 ~n~~~~~g~Tp--------Lh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad 115 (209)
T PHA02859 44 VNDCNDLYETP--------IFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS 115 (209)
T ss_pred hhccCccCCCH--------HHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC
Confidence 67788999999 79999854 8999999999999999997 5899999998764 479999999999999
Q ss_pred cCccCCCCchH-HHHHh----hHHHHHHHHhCCCCCCCCCCcccCCccchhcc
Q 007949 92 CSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 92 ~~~~~~~g~t~-~~aa~----~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~ 139 (583)
++.+|..|.|| |.++. +.+++++|+++|++++. ++..|.||||.++
T Consensus 116 in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~--~d~~g~t~Lh~~a 166 (209)
T PHA02859 116 ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN--KDFDNNNILYSYI 166 (209)
T ss_pred CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc--ccCCCCcHHHHHH
Confidence 99999999995 66654 58899999999999887 7889999999643
No 40
>PHA03095 ankyrin-like protein; Provisional
Probab=99.54 E-value=2.9e-14 Score=153.55 Aligned_cols=127 Identities=20% Similarity=0.156 Sum_probs=114.6
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcC---CHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC-CHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG-HLDA 81 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~~~~ 81 (583)
-++...+. |+++|.++..|.|| ||+|+..| +.++++.|++.|+++|.+|..|+||||+|+..| +.++
T Consensus 28 ~~v~~Ll~~ga~vn~~~~~g~t~--------Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~i 99 (471)
T PHA03095 28 EEVRRLLAAGADVNFRGEYGKTP--------LHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDV 99 (471)
T ss_pred HHHHHHHHcCCCcccCCCCCCCH--------HHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHH
Confidence 34555565 89999999999999 79999999 999999999999999999999999999999999 5999
Q ss_pred HHHHHhcCCCcCccCCCCch-HHHHHh----hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 82 ARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 82 v~~Ll~~ga~~~~~~~~g~t-~~~aa~----~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|+++|++++..+..|.| +|+++. +.+++++|+++|++++. .+..|.||||+|+..++
T Consensus 100 v~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~--~d~~g~tpL~~a~~~~~ 164 (471)
T PHA03095 100 IKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA--LDLYGMTPLAVLLKSRN 164 (471)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHHHcCC
Confidence 99999999999999999998 577773 67899999999999887 78899999999987664
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.53 E-value=3.7e-14 Score=152.92 Aligned_cols=127 Identities=15% Similarity=0.167 Sum_probs=108.2
Q ss_pred ccchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHc-----CCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC--
Q 007949 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRA-----GDVDRLRYILESGVNVNARDQWDSVALYYACLAG-- 77 (583)
Q Consensus 6 ~~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-- 77 (583)
..+++..++ |+|+|.+|..|.|| ||.|+.. ++.++++.|+++|+++|.+|..|+||||+|+..+
T Consensus 51 ~~iv~~Ll~~Gadvn~~d~~g~Tp--------L~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~ 122 (489)
T PHA02798 51 TDIVKLFINLGANVNGLDNEYSTP--------LCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYI 122 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCh--------HHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCc
Confidence 356777776 99999999999999 7888753 7789999999999999999999999999999875
Q ss_pred -CHHHHHHHHhcCCCcCccCCCCchH-HHHHh--h---HHHHHHHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 78 -HLDAARMLLESGAICSEHTFDGDRC-HYAAL--N---LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 78 -~~~~v~~Ll~~ga~~~~~~~~g~t~-~~aa~--~---~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
+.+++++|+++|++++..|..|.|| |+++. + .+++++|++.|++++.. .+..|.||||.+...
T Consensus 123 ~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~-~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 123 NNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH-NNKEKYDTLHCYFKY 192 (489)
T ss_pred ChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc-cCcCCCcHHHHHHHh
Confidence 7899999999999999999999984 66665 4 78999999999988762 235788999987653
No 42
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.53 E-value=4.7e-14 Score=149.98 Aligned_cols=127 Identities=21% Similarity=0.240 Sum_probs=112.2
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCC-----------------------CCCcc
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-----------------------NVNAR 62 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~-----------------------~~~~~ 62 (583)
-+++..++ |+++|..+..|.|| ||+|+..|+.+++++|+++|+ +++.+
T Consensus 49 ~iv~~Ll~~Ga~~n~~~~~~~t~--------L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~ 120 (434)
T PHA02874 49 KIVELFIKHGADINHINTKIPHP--------LLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIK 120 (434)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCC
Confidence 44555565 88899999999999 899999999999999987764 46778
Q ss_pred CCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcc
Q 007949 63 DQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 63 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~ 139 (583)
|..|.||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+++|++++. .+..|.||||.|+
T Consensus 121 ~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~--~~~~g~tpL~~A~ 198 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV--KDNNGESPLHNAA 198 (434)
T ss_pred CCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC--CCCCCCCHHHHHH
Confidence 889999999999999999999999999999999999998 577777 89999999999998877 6889999999999
Q ss_pred cccc
Q 007949 140 GANR 143 (583)
Q Consensus 140 ~~~~ 143 (583)
..++
T Consensus 199 ~~g~ 202 (434)
T PHA02874 199 EYGD 202 (434)
T ss_pred HcCC
Confidence 8776
No 43
>PHA03095 ankyrin-like protein; Provisional
Probab=99.53 E-value=4.2e-14 Score=152.28 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=111.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcC-CHHHHHHHHHcCCCCCccCCCChhHHHHHH--HhCCHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG-DVDRLRYILESGVNVNARDQWDSVALYYAC--LAGHLDAA 82 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~~v 82 (583)
-++...++ |+|+|.+|..|+|| ||+|+..| +.+++++|+++|++++.+|..|+||||+|+ ..++.+++
T Consensus 64 ~iv~~Ll~~Gadin~~~~~g~Tp--------Lh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv 135 (471)
T PHA03095 64 DIVRLLLEAGADVNAPERCGFTP--------LHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVI 135 (471)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCH--------HHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHH
Confidence 34555666 99999999999999 89999999 599999999999999999999999999999 45688999
Q ss_pred HHHHhcCCCcCccCCCCchH-HHHHh----hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 83 RMLLESGAICSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 83 ~~Ll~~ga~~~~~~~~g~t~-~~aa~----~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|+++|++++..+..|.|| |.++. +.+++++|+++|+++.. .+..|.||||.|+...+
T Consensus 136 ~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~--~d~~g~t~Lh~~~~~~~ 199 (471)
T PHA03095 136 RLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA--VDDRFRSLLHHHLQSFK 199 (471)
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHHCC
Confidence 99999999999999999995 55554 57899999999998877 47889999999997544
No 44
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.51 E-value=5.9e-14 Score=151.49 Aligned_cols=127 Identities=20% Similarity=0.285 Sum_probs=106.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAAR 83 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 83 (583)
.++...++ |++++..+..|.|| ||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.++++
T Consensus 122 ~iv~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~ 193 (480)
T PHA03100 122 SIVEYLLDNGANVNIKNSDGENL--------LHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIK 193 (480)
T ss_pred HHHHHHHHcCCCCCccCCCCCcH--------HHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHH
Confidence 55566665 88899899999999 79999988 889999999999999888888999999999999999999
Q ss_pred HHHhcCCCcCccCCCC------ch-HHHHHh--h--HHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 84 MLLESGAICSEHTFDG------DR-CHYAAL--N--LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 84 ~Ll~~ga~~~~~~~~g------~t-~~~aa~--~--~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+++|++++..+..| .| +|.++. + .+++++|+++|++++. ++..|.||||.|+..++
T Consensus 194 ~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~--~d~~g~TpL~~A~~~~~ 262 (480)
T PHA03100 194 FLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI--KDVYGFTPLHYAVYNNN 262 (480)
T ss_pred HHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 9999999988888877 66 466666 5 7888899988888777 67888899999988766
No 45
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.51 E-value=8.4e-14 Score=127.25 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=95.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHH---HHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHHHh-cC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDR---LRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SG 89 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~---v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~-~g 89 (583)
|.+++.+|..|+|| ||+|+..|+.+. +++|+..|+++|.+| ..|+||||+|+..|+.+++++|+. .|
T Consensus 47 g~~~~~~d~~g~t~--------Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g 118 (166)
T PHA02743 47 GHLLHRYDHHGRQC--------THMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLG 118 (166)
T ss_pred chhhhccCCCCCcH--------HHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC
Confidence 78899999999999 899999988654 789999999999998 589999999999999999999995 79
Q ss_pred CCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccC
Q 007949 90 AICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA 131 (583)
Q Consensus 90 a~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~ 131 (583)
++++.++..|.| +|+++. +.+++++|+.+|++++. ++..|
T Consensus 119 ad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~--~~~~~ 161 (166)
T PHA02743 119 VNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDD--PLSIG 161 (166)
T ss_pred CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cccCC
Confidence 999999999998 577666 78999999999998877 44444
No 46
>PHA02946 ankyin-like protein; Provisional
Probab=99.51 E-value=7e-14 Score=147.96 Aligned_cols=126 Identities=16% Similarity=0.223 Sum_probs=109.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC--HHHHHHHHHcCCCCCc-cCCCChhHHHHHHHhCCHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD--VDRLRYILESGVNVNA-RDQWDSVALYYACLAGHLDAA 82 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~--~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v 82 (583)
-+++..+. |+++|.+|..|+|| ||+|+..++ .+++++|+++|++++. .|..|.|||| |+..|+.+++
T Consensus 86 eiv~lLL~~GAdin~~d~~g~Tp--------Lh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv 156 (446)
T PHA02946 86 RIVAMLLTHGADPNACDKQHKTP--------LYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVF 156 (446)
T ss_pred HHHHHHHHCcCCCCCCCCCCCCH--------HHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHH
Confidence 34555565 89999999999999 799988764 7899999999999995 6899999997 6678999999
Q ss_pred HHHHhcCCCcCccCCCCch-HHHHHh----hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 83 RMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 83 ~~Ll~~ga~~~~~~~~g~t-~~~aa~----~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+.|+++|++++..|..|+| +|+++. +.+++++|++.|++++. ++..|.||||+|+..+.
T Consensus 157 ~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~--~d~~G~TpLH~Aa~~~~ 220 (446)
T PHA02946 157 KKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK--PDHDGNTPLHIVCSKTV 220 (446)
T ss_pred HHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCC
Confidence 9999999999999999999 566655 46899999999999888 78899999999997664
No 47
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.51 E-value=7.8e-14 Score=150.65 Aligned_cols=168 Identities=14% Similarity=0.048 Sum_probs=77.2
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCC-CccCCCChhHHHHHHHh--CCHHHHHHHHhc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNV-NARDQWDSVALYYACLA--GHLDAARMLLES 88 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~ 88 (583)
|+|+|.+|..|+|| ||.|+.. |+.+++++|+++|+++ +.+|..|+||||+|+.. ++.+++++|+++
T Consensus 98 Gadin~~d~~g~tp--------L~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 169 (494)
T PHA02989 98 GADINLKTFNGVSP--------IVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF 169 (494)
T ss_pred CCCCCCCCCCCCcH--------HHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 44555555555555 3433322 3445555555555555 44455555555544432 344555555555
Q ss_pred CCCcCc-cCCCCchH-HHHHh------hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccccchhhhhhhccccccc
Q 007949 89 GAICSE-HTFDGDRC-HYAAL------NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTS 160 (583)
Q Consensus 89 ga~~~~-~~~~g~t~-~~aa~------~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~ 160 (583)
|++++. .+..|.|| |.++. +.+++++|++.|++++. ++..|.|++|.++..+....... ..+..++.
T Consensus 170 Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~--~~~~~~t~l~~~~~~~~~~~~~~---~~il~~l~ 244 (494)
T PHA02989 170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIET--NNNGSESVLESFLDNNKILSKKE---FKVLNFIL 244 (494)
T ss_pred CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccc--cCCccccHHHHHHHhchhhcccc---hHHHHHHH
Confidence 555544 34444442 32222 33445555555554443 23334444444333221100000 00011111
Q ss_pred CCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCC
Q 007949 161 NGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETD 203 (583)
Q Consensus 161 ~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~ 203 (583)
.+ .||..+-.....|.|.++-....+.++.++..+
T Consensus 245 ~~--------advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G 279 (494)
T PHA02989 245 KY--------IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLG 279 (494)
T ss_pred hC--------CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC
Confidence 11 255555555667888888777777777777654
No 48
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.51 E-value=7.9e-14 Score=147.42 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=100.6
Q ss_pred CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch
Q 007949 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR 101 (583)
Q Consensus 22 d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 101 (583)
+..|+|| ||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 99 ~~~g~tp--------L~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T 170 (413)
T PHA02875 99 YKDGMTP--------LHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCT 170 (413)
T ss_pred cCCCCCH--------HHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC
Confidence 4455666 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHh--hHHHHHHHHhCCCCCCCCCCcccC-Cccchhcccccc
Q 007949 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGCGANR 143 (583)
Q Consensus 102 -~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~-~t~L~~A~~~~~ 143 (583)
+|+|+. +.+++++|+++|++++. .+..| .||+|+|+..++
T Consensus 171 pL~~A~~~g~~eiv~~Ll~~ga~~n~--~~~~~~~t~l~~A~~~~~ 214 (413)
T PHA02875 171 PLIIAMAKGDIAICKMLLDSGANIDY--FGKNGCVAALCYAIENNK 214 (413)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCc--CCCCCCchHHHHHHHcCC
Confidence 577776 89999999999999887 45555 588998998776
No 49
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.51 E-value=5.5e-14 Score=153.87 Aligned_cols=124 Identities=12% Similarity=0.103 Sum_probs=104.9
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC--HHHHHHHHHcCCCCCccCCCChhHHHHHH---------
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD--VDRLRYILESGVNVNARDQWDSVALYYAC--------- 74 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~--~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~--------- 74 (583)
.+++..++ |+++|.+|..|+|| ||+|+..|+ .++++.|+++|+++|.+|..|+||||+|+
T Consensus 193 eIVklLLe~GADVN~kD~~G~TP--------LH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~E 264 (764)
T PHA02716 193 DILEWLCNNGVNVNLQNNHLITP--------LHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPE 264 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCH--------HHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHH
Confidence 35666666 99999999999999 799999995 48999999999999999999999999753
Q ss_pred ----------------------------HhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh----hHHHHHHHHhCCCC
Q 007949 75 ----------------------------LAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEAR 121 (583)
Q Consensus 75 ----------------------------~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~----~~~i~~~L~~~~~~ 121 (583)
..|+.+++++|+++|++++.+|..|+| +|+++. +.+++++|+++|++
T Consensus 265 IvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD 344 (764)
T PHA02716 265 ITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND 344 (764)
T ss_pred HHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC
Confidence 347788889999999999999999988 466543 56889999999988
Q ss_pred CCCCCCcccCCccchhccc
Q 007949 122 PPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 122 ~~~~~~~~~~~t~L~~A~~ 140 (583)
++. ++..|.||||.|+.
T Consensus 345 IN~--kD~~G~TPLH~A~~ 361 (764)
T PHA02716 345 LNE--PDNIGNTVLHTYLS 361 (764)
T ss_pred Ccc--CCCCCCCHHHHHHH
Confidence 777 68889999998763
No 50
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.50 E-value=9.1e-14 Score=158.52 Aligned_cols=125 Identities=21% Similarity=0.203 Sum_probs=109.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
-.++..+. |+|+|..|..|+|| ||+||..|+.++++.|+++|+++|.+|.+|+||||+|+..||.+++++|
T Consensus 539 ~~l~~Ll~~G~d~n~~d~~G~Tp--------Lh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L 610 (823)
T PLN03192 539 ALLEELLKAKLDPDIGDSKGRTP--------LHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRIL 610 (823)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCH--------HHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 34555565 89999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++.++..+. ..|.+ +|.|+. +.++++.|+++|++++. ++..|.||||.|+..++
T Consensus 611 ~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~--~d~~G~TpLh~A~~~g~ 667 (823)
T PLN03192 611 YHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDS--EDHQGATALQVAMAEDH 667 (823)
T ss_pred HhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHCCc
Confidence 988776553 23445 788877 89999999999999887 78999999999998776
No 51
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.49 E-value=5.7e-14 Score=121.31 Aligned_cols=116 Identities=22% Similarity=0.153 Sum_probs=97.8
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
.-+|.+|.+|.|| ||-|+-.||.++++.|+..|++++++...||||||-||..++.+++-.|+.+|+|+|+.
T Consensus 88 n~vNtrD~D~YTp--------LHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~ 159 (228)
T KOG0512|consen 88 NHVNTRDEDEYTP--------LHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQ 159 (228)
T ss_pred ccccccccccccH--------HHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccc
Confidence 4599999999999 79999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchH-HHHHh---hHHHHHHHH-hCCCCCCCCCCcccCCccchhcccc
Q 007949 96 TFDGDRC-HYAAL---NLKVRKLLK-AYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 96 ~~~g~t~-~~aa~---~~~i~~~L~-~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
.....|| |.+|. ....+.+|+ ..+..+.. .+..+.||+..|-..
T Consensus 160 t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~--~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 160 TKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGL--KNNLEETAFDIARRT 208 (228)
T ss_pred ccccchhhHHhhcccchHHHHHHHhhccccChhh--hcCccchHHHHHHHh
Confidence 8877885 66665 333445544 44445444 677888999887643
No 52
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.49 E-value=4.9e-14 Score=129.84 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=52.4
Q ss_pred CcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCc--ccEEEcCCCCHHHHHHHhhhhcCCcc
Q 007949 171 PDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRN--EIRFSREKLSYPALYGLIHFFYSDRL 234 (583)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~--~~~i~l~~v~~~~~~~lL~ylYtg~~ 234 (583)
.|+-+......||+||++|++|||+|+.+.+.+-.... .-.|..-+++.++|+++|+|+|||+.
T Consensus 131 ~dldiiFkeTcfpahRA~laaRCpffK~l~nsd~e~~ae~i~dik~ag~dm~~feafLh~l~tgEf 196 (401)
T KOG2838|consen 131 GDLDIIFKETCFPAHRAFLAARCPFFKILANSDEEPEAEDICDIKFAGFDMDAFEAFLHSLITGEF 196 (401)
T ss_pred ccceeeeeeccchHHHHHHHhhCcchhhhccCCCCcchhhhhhhhhhccChHHHHHHHHHHHhccc
Confidence 48888888899999999999999999998876432221 22355568999999999999999997
No 53
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.49 E-value=1.5e-13 Score=111.50 Aligned_cols=89 Identities=22% Similarity=0.496 Sum_probs=82.4
Q ss_pred cEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHHHHhHh
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVC 251 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~a~~~ 251 (583)
||++.++|+.+++||.+|+++|+||+.||.+++.+.....+.++++++.+|+.+++|+|++.+.++..++..++.+|..+
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~a~~~ 80 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSGDFKESKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEENVEELLELADYL 80 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcCCCccCCCCEEEecCCCHHHHHHHHHeecCceeecCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999998887777888889999999999999999999999999999999999999
Q ss_pred chHHHHHHH
Q 007949 252 KCESLQRII 260 (583)
Q Consensus 252 ~~~~l~~~l 260 (583)
+++.+.+.+
T Consensus 81 ~~~~l~~~c 89 (90)
T smart00225 81 QIPGLVELC 89 (90)
T ss_pred CcHHHHhhh
Confidence 888877654
No 54
>PHA02798 ankyrin-like protein; Provisional
Probab=99.48 E-value=1.2e-13 Score=149.10 Aligned_cols=128 Identities=17% Similarity=0.153 Sum_probs=105.3
Q ss_pred cchhhhcccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHh-----CCHHH
Q 007949 7 STIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-----GHLDA 81 (583)
Q Consensus 7 ~~~~~~~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-----g~~~~ 81 (583)
-++...+++.++|.. ..|.|++ +.+.+...++.+++++|+++|+++|.+|..|.||||+|+.. ++.++
T Consensus 19 ~~v~~ll~~~~~~~~-~~~~~~~------~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~i 91 (489)
T PHA02798 19 STVKLLIKSCNPNEI-VNEYSIF------QKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDI 91 (489)
T ss_pred HHHHHHHhcCChhhh-cccchHH------HHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHH
Confidence 566677776666665 3466662 12344446689999999999999999999999999998764 67899
Q ss_pred HHHHHhcCCCcCccCCCCchH-HHHHh-----hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 82 ARMLLESGAICSEHTFDGDRC-HYAAL-----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 82 v~~Ll~~ga~~~~~~~~g~t~-~~aa~-----~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|+++|++++..|..|.|| |+++. +.+++++|+++|++++. .+..|.||||+|+..++
T Consensus 92 v~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~--~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 92 VKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTL--LDKDGFTMLQVYLQSNH 157 (489)
T ss_pred HHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc--cCCCCCcHHHHHHHcCC
Confidence 999999999999999999995 66765 57899999999999887 78999999999998775
No 55
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.48 E-value=1.3e-13 Score=121.29 Aligned_cols=126 Identities=21% Similarity=0.349 Sum_probs=105.1
Q ss_pred ccccCCCCCCCCCCCcEEEEECC---EeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 157 GVTSNGASNSDSFPPDVVFYVQG---RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 157 ~l~~~~~~~~~~~~~Dv~~~v~~---~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
+++....|+ |++|+++| +.+||||.||++||++++ |..+-.|.. ....+.++++++|...++|+||++
T Consensus 59 dL~Ek~qfS------Dlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN~~deks-e~~~~dDad~Ea~~t~iRWIYTDE 129 (280)
T KOG4591|consen 59 DLLEKEQFS------DLKFKFAGNSDKHIPAHKFVLAARSDFWK--FANGGDEKS-EELDLDDADFEAFHTAIRWIYTDE 129 (280)
T ss_pred HHhhccccc------ceeEEecCCccccCchhhhhhhhhcchhh--hccCCCcch-hhhcccccCHHHHHHhheeeeccc
Confidence 566666666 99999984 789999999999999886 333323333 345567899999999999999999
Q ss_pred ccCChhh--HHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 234 LEIAVDD--MEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 234 ~~i~~~~--~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
+++..++ ..++.++|..++++.|++.|. ||+.++.+|+..+...|...|...|..++.
T Consensus 130 idfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~a~l~V~NCIk~Ye~AEe~n~~qL~n~~~eiIA~~W~ 199 (280)
T KOG4591|consen 130 IDFKEDDEFLLELCELANRFQLELLKERCEKGLGALLHVDNCIKFYEFAEELNARQLMNVAAEIIAGAWD 199 (280)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHhhHHHHHHHHHHhhHHHHHHHHHHHHHhhcc
Confidence 9886664 568899999999999988865 899999999999999999999999998875
No 56
>PHA02795 ankyrin-like protein; Provisional
Probab=99.47 E-value=1.8e-13 Score=140.38 Aligned_cols=126 Identities=10% Similarity=0.021 Sum_probs=108.6
Q ss_pred ccchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCC-Ccc-----CCCChhHHHHHHHhCC
Q 007949 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNV-NAR-----DQWDSVALYYACLAGH 78 (583)
Q Consensus 6 ~~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~~~-----d~~g~t~L~~A~~~g~ 78 (583)
.-+++..++ |+|+|.++ +.|| +|+|+..|+.+++++|+++|++. +.. +..|.|++|.|+..++
T Consensus 131 ~eiV~~LI~~GADIn~~~--~~t~--------lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~ 200 (437)
T PHA02795 131 IDIVDFMVDHGAVIYKIE--CLNA--------YFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTV 200 (437)
T ss_pred HHHHHHHHHCCCCCCCCC--CCCH--------HHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCH
Confidence 356677777 99999854 5788 79999999999999999999753 322 2457899999999999
Q ss_pred HHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 79 LDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 79 ~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+++++|+++|++++.+|..|.| +|+|+. +.+++++|+++|++++. ++..|.||||.|+..+.
T Consensus 201 ~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~--~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 201 LEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA--VMSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcCC
Confidence 99999999999999999999998 577777 89999999999999988 78899999999998775
No 57
>PHA02917 ankyrin-like protein; Provisional
Probab=99.46 E-value=1.9e-13 Score=150.35 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=111.3
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCC---CC------------------------cHHHHHHHHcCCHHHHHHHHHcCCC
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKK---VP------------------------NGDVFEASRAGDVDRLRYILESGVN 58 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~---~~------------------------~~~L~~A~~~g~~~~v~~Ll~~g~~ 58 (583)
-+++..++ |++++.+|..|+|||+. .+ ...+|+|+..|+.+++++|+++|++
T Consensus 49 ~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gad 128 (661)
T PHA02917 49 EVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFD 128 (661)
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCC
Confidence 34455555 99999999999999861 01 0334567888899999999999999
Q ss_pred CCccCCCChhHHHHHH--HhCCHHHHHHHHhcCCCcCccCCC---C-----------ch-HHHHHh-------------h
Q 007949 59 VNARDQWDSVALYYAC--LAGHLDAARMLLESGAICSEHTFD---G-----------DR-CHYAAL-------------N 108 (583)
Q Consensus 59 ~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~~~~~~~---g-----------~t-~~~aa~-------------~ 108 (583)
+|.+|..|+||||.|+ ..|+.+++++|+++||+++..+.. | .| +|+++. +
T Consensus 129 in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~ 208 (661)
T PHA02917 129 LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR 208 (661)
T ss_pred CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCc
Confidence 9999999999999643 578999999999999999865532 3 36 688764 5
Q ss_pred HHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 109 ~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
.+++++|+++|++++. ++..|.||||+|+.+++.
T Consensus 209 ~eiv~~Li~~Gadvn~--~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 209 PEVVKCLINHGIKPSS--IDKNYCTALQYYIKSSHI 242 (661)
T ss_pred HHHHHHHHHCCCCccc--CCCCCCcHHHHHHHcCCC
Confidence 6899999999999888 789999999999988874
No 58
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.45 E-value=1.2e-13 Score=136.82 Aligned_cols=114 Identities=21% Similarity=0.294 Sum_probs=103.9
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCC
Q 007949 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (583)
Q Consensus 20 ~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 99 (583)
..+-.|.+| |--|+..||+++|+.|+.+|+++|.......|||--||.-||.+++++|+++|+|+++.|+.|
T Consensus 79 ge~Iegapp--------LWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhG 150 (615)
T KOG0508|consen 79 GETIEGAPP--------LWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHG 150 (615)
T ss_pred CcccCCCch--------hhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCC
Confidence 334567777 567778899999999999999999988888899999999999999999999999999999999
Q ss_pred ch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 100 ~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.| ++.+|. +.+|+++|++.|++++. ++..|+|+||.+.+.++
T Consensus 151 hTcLmIa~ykGh~~I~qyLle~gADvn~--ks~kGNTALH~caEsG~ 195 (615)
T KOG0508|consen 151 HTCLMIACYKGHVDIAQYLLEQGADVNA--KSYKGNTALHDCAESGS 195 (615)
T ss_pred CeeEEeeeccCchHHHHHHHHhCCCcch--hcccCchHHHhhhhccc
Confidence 99 677777 99999999999999988 89999999999998888
No 59
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.44 E-value=3.7e-13 Score=151.29 Aligned_cols=106 Identities=25% Similarity=0.231 Sum_probs=84.1
Q ss_pred HHHHHHHHc-CCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh---hH
Q 007949 35 GDVFEASRA-GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL---NL 109 (583)
Q Consensus 35 ~~L~~A~~~-g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~---~~ 109 (583)
++||+|+.. ++.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. ..
T Consensus 343 TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~ 422 (682)
T PHA02876 343 TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPY 422 (682)
T ss_pred cHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHH
Confidence 347777764 4677777888888888888888888888888888888888888888888888888887 576665 35
Q ss_pred HHHHHHHhCCCCCCCCCCcccCCccchhccccc
Q 007949 110 KVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (583)
Q Consensus 110 ~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~ 142 (583)
.++++|++.|++++. ++..|.||||+|+..+
T Consensus 423 ~~vk~Ll~~gadin~--~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 423 MSVKTLIDRGANVNS--KNKDLSTPLHYACKKN 453 (682)
T ss_pred HHHHHHHhCCCCCCc--CCCCCChHHHHHHHhC
Confidence 567888888888777 6888899999988755
No 60
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.44 E-value=5e-13 Score=150.28 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=106.0
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCC-HHHHHHHHhcCCCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-LDAARMLLESGAICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga~~~ 93 (583)
|+++|.+|..|+|| ||+|+..|+.++++.|+++|++++..+..|.||||+|+..++ ..++++|+++|++++
T Consensus 365 gadin~~d~~G~Tp--------Lh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin 436 (682)
T PHA02876 365 GANVNARDYCDKTP--------IHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVN 436 (682)
T ss_pred CCCCccCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 77788888888888 899999999999999999999999999999999999987666 567999999999999
Q ss_pred ccCCCCch-HHHHHh---hHHHHHHHHhCCCCCCCCCCcccCCccchhccccc
Q 007949 94 EHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~---~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~ 142 (583)
.+|..|.| +|+|+. +.+++++|+++|++++. .+..|.||+++|+..+
T Consensus 437 ~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~--~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 437 SKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA--INIQNQYPLLIALEYH 487 (682)
T ss_pred cCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHhC
Confidence 99999999 577776 47999999999999888 7899999999998643
No 61
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.43 E-value=4.8e-13 Score=144.53 Aligned_cols=127 Identities=11% Similarity=0.043 Sum_probs=100.7
Q ss_pred cchhhhcc-cCCC-CCCCCCCCCCCCCCCcHHHHHHHHc--CCHHHHHHHHHcCCCCCc-cCCCChhHHHHHHHhC----
Q 007949 7 STIDAELD-EIDL-DASDFSSSVPLKKVPNGDVFEASRA--GDVDRLRYILESGVNVNA-RDQWDSVALYYACLAG---- 77 (583)
Q Consensus 7 ~~~~~~~~-~~di-n~~d~~g~tpl~~~~~~~L~~A~~~--g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g---- 77 (583)
.++...++ |+|+ +.+|..|+|| ||+|+.. ++.++++.|+++|++++. .+..|.||||.|+..+
T Consensus 125 eiv~~Ll~~Gadin~~~d~~g~tp--------Lh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~ 196 (494)
T PHA02989 125 DMLRFLLSKGINVNDVKNSRGYNL--------LHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVI 196 (494)
T ss_pred HHHHHHHHCCCCcccccCCCCCCH--------HHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccc
Confidence 34555666 9999 8999999999 7998764 689999999999999998 6789999999987754
Q ss_pred CHHHHHHHHhcCCCcCccC--------------------------------------CCCch-HHHHHh--hHHHHHHHH
Q 007949 78 HLDAARMLLESGAICSEHT--------------------------------------FDGDR-CHYAAL--NLKVRKLLK 116 (583)
Q Consensus 78 ~~~~v~~Ll~~ga~~~~~~--------------------------------------~~g~t-~~~aa~--~~~i~~~L~ 116 (583)
+.+++++|++.|++++..+ ..|.| +|+|+. +.+++++|+
T Consensus 197 ~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL 276 (494)
T PHA02989 197 SIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLL 276 (494)
T ss_pred cHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHH
Confidence 8999999999998876554 44666 455555 677788888
Q ss_pred hCCCCCCCCCCcccCCccchhcccccc
Q 007949 117 AYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 117 ~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+.|++++. ++..|.||||+|+..++
T Consensus 277 ~~Gadin~--~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 277 KLGDDIYN--VSKDGDTVLTYAIKHGN 301 (494)
T ss_pred HcCCCccc--cCCCCCCHHHHHHHcCC
Confidence 88877776 57777888888876655
No 62
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.43 E-value=3.1e-13 Score=142.31 Aligned_cols=118 Identities=20% Similarity=0.255 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh-cC-CCcCcc
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE-SG-AICSEH 95 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g-a~~~~~ 95 (583)
+|-.|.+|-|| ||+||+.|+.+.+..|+..|++++.++.++.||||.|+++|+.++++.|++ .| ...+..
T Consensus 266 v~~~d~dg~tp--------LH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~ 337 (929)
T KOG0510|consen 266 VNDEDNDGCTP--------LHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNES 337 (929)
T ss_pred hhcccccCCch--------HHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccc
Confidence 67789999999 799999999999999999999999999999999999999999999999998 54 668888
Q ss_pred CCCCchH-HHHHh--hHHHHHHHHhCCCCCC-CCCCcccCCccchhcccccc
Q 007949 96 TFDGDRC-HYAAL--NLKVRKLLKAYEARPP-PLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 96 ~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~-~~~~~~~~~t~L~~A~~~~~ 143 (583)
|..|.|| |.++. +..++++|+++|+... ....+.+|.||||+|+..|+
T Consensus 338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred cccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence 9999995 66666 8999999999999765 21248899999999998777
No 63
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.42 E-value=1.7e-12 Score=105.46 Aligned_cols=84 Identities=35% Similarity=0.546 Sum_probs=76.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~ 113 (583)
||+||..|+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.++..|+| +|+|+. +.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 6999999999999999999988876 889999999999999999999999999999999999 577777 899999
Q ss_pred HHHhCCCCCCC
Q 007949 114 LLKAYEARPPP 124 (583)
Q Consensus 114 ~L~~~~~~~~~ 124 (583)
+|+++|++++.
T Consensus 77 ~Ll~~g~~~~~ 87 (89)
T PF12796_consen 77 LLLEHGADVNI 87 (89)
T ss_dssp HHHHTTT-TTS
T ss_pred HHHHcCCCCCC
Confidence 99999998765
No 64
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.41 E-value=5.1e-13 Score=108.41 Aligned_cols=90 Identities=36% Similarity=0.508 Sum_probs=81.6
Q ss_pred cEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHHhH
Q 007949 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQA 423 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~~~ 423 (583)
|+++.++++.|++||.+|+++|+||+.||.+ +|.++ ....+.++++++.+|+.+++|+|++.+ .++..++
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~--~~~~~-------~~~~i~l~~~~~~~f~~~l~~ly~~~~-~~~~~~~ 70 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSG--DFKES-------KKSEIYLDDVSPEDFRALLEFLYTGKL-DLPEENV 70 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcC--CCccC-------CCCEEEecCCCHHHHHHHHHeecCcee-ecCHHHH
Confidence 6889999999999999999999999999997 55543 345789999999999999999999999 7888899
Q ss_pred HHHHHHHhccCchHHHHHHH
Q 007949 424 EEMFDAASRYLLFPLKRAVA 443 (583)
Q Consensus 424 ~~ll~~A~~~~~~~l~~~c~ 443 (583)
.+++.+|++|+++.|++.|+
T Consensus 71 ~~l~~~a~~~~~~~l~~~c~ 90 (90)
T smart00225 71 EELLELADYLQIPGLVELCE 90 (90)
T ss_pred HHHHHHHHHHCcHHHHhhhC
Confidence 99999999999999999884
No 65
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.40 E-value=9.4e-13 Score=138.69 Aligned_cols=183 Identities=16% Similarity=0.182 Sum_probs=141.7
Q ss_pred hhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh
Q 007949 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 9 ~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
|+.++. |++++..|..+.+| +|+|+..|++++++.|+++|+|+|..|..|.||||+||..++.+..+.|++
T Consensus 104 i~~Lls~gad~~~~n~~~~ap--------lh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~ 175 (929)
T KOG0510|consen 104 IQVLLSYGADTPLRNLNKNAP--------LHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELIN 175 (929)
T ss_pred HHHHHhcCCCCChhhhhccCc--------hhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHh
Confidence 444454 89999999999999 799999999999999999999999999999999999999999998899999
Q ss_pred cCCCcCccCCCCchH-HHHHh--hHHHHHHHHh-----CCCCCCCCCCcccCCccchhccccccc-----cchhhhh---
Q 007949 88 SGAICSEHTFDGDRC-HYAAL--NLKVRKLLKA-----YEARPPPLGPLQAALRDTFLGCGANRQ-----FLEEAEV--- 151 (583)
Q Consensus 88 ~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~-----~~~~~~~~~~~~~~~t~L~~A~~~~~~-----~l~~~~~--- 151 (583)
.|+++-..|.+|.++ |.+|. ..+..++.+. .+..++. -+..+.||||+|+++++. .|+....
T Consensus 176 ~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~--~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~ 253 (929)
T KOG0510|consen 176 KGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINF--DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIAD 253 (929)
T ss_pred cCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccccc--ccCCCCcchhhhhhcCCHHHHHHHHhCccccch
Confidence 999999999999985 88888 6777777776 4444554 567888999999988872 1221111
Q ss_pred -----hhcccccccCCCC--CCC-----------------CCCCcEEEEECCEeEehhHHHHhhccHHHHHhhc
Q 007949 152 -----VLGISGVTSNGAS--NSD-----------------SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFE 201 (583)
Q Consensus 152 -----~~~~~~l~~~~~~--~~~-----------------~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~ 201 (583)
......+..+... +.. +.+.|+..+-.++.-|.|.+....|-.-.+.++.
T Consensus 254 ~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 254 VQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred hhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh
Confidence 1111122211111 100 5677999998999999999999999888999997
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.40 E-value=2.7e-13 Score=122.51 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=92.6
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCC--C-----CCccCCCChhHHHHHHHhCCHH---HHHHHH
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV--N-----VNARDQWDSVALYYACLAGHLD---AARMLL 86 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~--~-----~~~~d~~g~t~L~~A~~~g~~~---~v~~Ll 86 (583)
..+..|..|.|| ||+||..|+.. ..+...+. + ++.+|..|.||||+|+..|+.+ ++++|+
T Consensus 9 ~~~~~d~~g~tp--------Lh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll 78 (154)
T PHA02736 9 FASEPDIEGENI--------LHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLM 78 (154)
T ss_pred HHHhcCCCCCCH--------HHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHH
Confidence 356678889999 89999999843 33332222 2 3456889999999999999874 688999
Q ss_pred hcCCCcCccC-CCCch-HHHHHh--hHHHHHHHHh-CCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~-~~g~t-~~~aa~--~~~i~~~L~~-~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++.++ ..|.| +|+|+. +.+++++|+. .|++++. .+..|.||||+|+..++
T Consensus 79 ~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~--~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 79 EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI--LNYAFKTPYYVACERHD 138 (154)
T ss_pred HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc--ccCCCCCHHHHHHHcCC
Confidence 9999999998 48998 577777 8999999997 4888877 78899999999998766
No 67
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.38 E-value=1.4e-12 Score=100.78 Aligned_cols=92 Identities=25% Similarity=0.431 Sum_probs=79.9
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|.++|..- .|++| ||||+-+|..+++++|+..|++++.+|++|.|||.-|+..||.+||++|+..||+-..
T Consensus 25 g~nVn~~~-ggR~p--------lhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~ 95 (117)
T KOG4214|consen 25 GLNVNEIY-GGRTP--------LHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTI 95 (117)
T ss_pred cccHHHHh-CCccc--------chHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccce
Confidence 45666543 78999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchHHHHHhhHHHHHHH
Q 007949 95 HTFDGDRCHYAALNLKVRKLL 115 (583)
Q Consensus 95 ~~~~g~t~~~aa~~~~i~~~L 115 (583)
...+|.++..++...+|..+|
T Consensus 96 ~~PdG~~~~eate~edIr~LL 116 (117)
T KOG4214|consen 96 HAPDGTALIEATEEEDIRELL 116 (117)
T ss_pred eCCCchhHHhhccHHHHHHHh
Confidence 888998888877777776655
No 68
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.37 E-value=1.2e-12 Score=146.40 Aligned_cols=127 Identities=23% Similarity=0.194 Sum_probs=113.7
Q ss_pred cCCCCCCCCCCCCCCC-------------------------CCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhH
Q 007949 15 EIDLDASDFSSSVPLK-------------------------KVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVA 69 (583)
Q Consensus 15 ~~din~~d~~g~tpl~-------------------------~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~ 69 (583)
|.++|....+|.|||+ +.+.+.+|.|...+++.+++.++.+|++++.++.+|+||
T Consensus 464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 7888888888888875 234556888888888888888888999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 70 LYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 70 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
||.||.+|+.++|++|+++|++++.+++.|+| +|.||. +.+++.+|+++|++++. .+..|.|||+.|...++
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna--~d~~g~TpL~iA~~lg~ 618 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA--ADLDGFTPLHIAVRLGY 618 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc--ccccCcchhHHHHHhcc
Confidence 99999999999999999999999999999999 577777 89999999999999998 78999999999998777
No 69
>PHA02741 hypothetical protein; Provisional
Probab=99.37 E-value=1.9e-12 Score=118.84 Aligned_cols=100 Identities=19% Similarity=0.187 Sum_probs=90.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC----HHHHHHHHHcCCCCCccCC-CChhHHHHHHHhCCHHHHHHHHh-c
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGVNVNARDQ-WDSVALYYACLAGHLDAARMLLE-S 88 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~----~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~-~ 88 (583)
|+++|.+|..|+|| ||+|+..|+ .+++++|+..|+++|.++. .|+||||+|+..++.+++++|+. .
T Consensus 50 ga~in~~d~~g~T~--------Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~ 121 (169)
T PHA02741 50 AAALNATDDAGQMC--------IHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQP 121 (169)
T ss_pred hhhhhccCCCCCcH--------HHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 68899999999999 899999999 5889999999999999985 99999999999999999999997 5
Q ss_pred CCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCC
Q 007949 89 GAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARP 122 (583)
Q Consensus 89 ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~ 122 (583)
|++++..|..|.|| |.++. +.+++++|+++++..
T Consensus 122 g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 122 GIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 99999999999995 55555 789999999877653
No 70
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.36 E-value=6.9e-12 Score=125.22 Aligned_cols=124 Identities=19% Similarity=0.200 Sum_probs=104.6
Q ss_pred CCCCcEEEEECC-----EeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHH
Q 007949 168 SFPPDVVFYVQG-----RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME 242 (583)
Q Consensus 168 ~~~~Dv~~~v~~-----~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~ 242 (583)
+..+|+.|+|++ +++||||.+|+..|.+|.+||.++|.+....+|.+++|+|.+|..+|+|||++++.+..+++.
T Consensus 112 ~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei~lpdvepaaFl~~L~flYsdev~~~~dtvi 191 (521)
T KOG2075|consen 112 ELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEIRLPDVEPAAFLAFLRFLYSDEVKLAADTVI 191 (521)
T ss_pred cccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCceeecCCcChhHhHHHHHHHhcchhhhhHHHHH
Confidence 334599999963 789999999999999999999999999888899999999999999999999999999999999
Q ss_pred HHHHHHhHhchHHHHHHHH----------H-HHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 243 DLVKICKVCKCESLQRIIE----------K-ELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 243 ~ll~~a~~~~~~~l~~~l~----------~-~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
.++.+|++|-+..|.+.+- | ++..-.-|..++-++|...|...+..++.
T Consensus 192 ~tl~~AkKY~VpaLer~CVkflr~~l~~~naf~~L~q~A~lf~ep~Li~~c~e~id~~~~ 251 (521)
T KOG2075|consen 192 TTLYAAKKYLVPALERQCVKFLRKNLMADNAFLELFQRAKLFDEPSLISICLEVIDKSFE 251 (521)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCHHHHHHHHHHhhhHHH
Confidence 9999997776666655543 2 23233337888889999999999877764
No 71
>PHA02917 ankyrin-like protein; Provisional
Probab=99.36 E-value=3.1e-12 Score=140.91 Aligned_cols=174 Identities=11% Similarity=-0.054 Sum_probs=121.2
Q ss_pred ccCCCCCCCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC-------------
Q 007949 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAG------------- 77 (583)
Q Consensus 14 ~~~din~~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g------------- 77 (583)
+|.+++.+|..|+|| ||+||.. |+.++++.|++.|++++.++..|+||||+|+..|
T Consensus 21 ~~~~~~~~d~~g~t~--------Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll 92 (661)
T PHA02917 21 DRDPNDTRNQFKNNA--------LHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALL 92 (661)
T ss_pred ccCcccccCCCCCcH--------HHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHH
Confidence 688889999999999 7997555 8899999999999999999999999999887644
Q ss_pred ----------------------CHHHHHHHHhcCCCcCccCCCCchH-HHHH-h---hHHHHHHHHhCCCCCCCCC-Ccc
Q 007949 78 ----------------------HLDAARMLLESGAICSEHTFDGDRC-HYAA-L---NLKVRKLLKAYEARPPPLG-PLQ 129 (583)
Q Consensus 78 ----------------------~~~~v~~Ll~~ga~~~~~~~~g~t~-~~aa-~---~~~i~~~L~~~~~~~~~~~-~~~ 129 (583)
+.+++++|+++|++++.+|.+|.|| |.++ . +.+++++|+++|++++... .+.
T Consensus 93 ~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~ 172 (661)
T PHA02917 93 EATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDE 172 (661)
T ss_pred hccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccc
Confidence 4567888899999999999999984 5333 2 7999999999999886521 112
Q ss_pred cC-----------Cccchhccccccccchh--hhhhhcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhcc--H
Q 007949 130 AA-----------LRDTFLGCGANRQFLEE--AEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARS--V 194 (583)
Q Consensus 130 ~~-----------~t~L~~A~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S--~ 194 (583)
.| .||||+|+..+...... .....++..++-+. +.||...-.....|.|-++-...- +
T Consensus 173 ~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~-------Gadvn~~d~~G~TpLh~A~~~g~~~~e 245 (661)
T PHA02917 173 YGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINH-------GIKPSSIDKNYCTALQYYIKSSHIDID 245 (661)
T ss_pred cccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHC-------CCCcccCCCCCCcHHHHHHHcCCCcHH
Confidence 23 59999998532100000 00001112222111 237766666666788877655442 4
Q ss_pred HHHHhhcC
Q 007949 195 FFRRKFET 202 (583)
Q Consensus 195 ~f~~~~~~ 202 (583)
..+.++.+
T Consensus 246 ivk~Li~g 253 (661)
T PHA02917 246 IVKLLMKG 253 (661)
T ss_pred HHHHHHhC
Confidence 66666653
No 72
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.34 E-value=2e-12 Score=116.83 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=86.9
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHH---HHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHHHh-cCCCc
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVD---RLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SGAIC 92 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~---~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~ 92 (583)
++.+|..|+|| ||+|+..|+.+ ++++|++.|++++.++ ..|+||||+|+..|+.+++++|+. .|+++
T Consensus 48 ~~~~d~~g~t~--------Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~ 119 (154)
T PHA02736 48 VLEYNRHGKQC--------VHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM 119 (154)
T ss_pred HHHhcCCCCEE--------EEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 34568899999 79999999874 6889999999999998 599999999999999999999997 59999
Q ss_pred CccCCCCchH-HHHHh--hHHHHHHHHhCCCCCC
Q 007949 93 SEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPP 123 (583)
Q Consensus 93 ~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~ 123 (583)
+..+..|.|| |+|+. +.+++++|+.+|+++.
T Consensus 120 n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 120 EILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999994 66666 7899999999998764
No 73
>PHA02730 ankyrin-like protein; Provisional
Probab=99.34 E-value=3.6e-12 Score=137.13 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=103.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC----HHHHHHHHHcCC--CCCccCCCChhHHHH---HHHh
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGV--NVNARDQWDSVALYY---ACLA 76 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~----~~~v~~Ll~~g~--~~~~~d~~g~t~L~~---A~~~ 76 (583)
-+++-.+. |+++|.. ..|+|| ||+|+..++ .++++.|+++|+ ++|.+|..|.||||. |...
T Consensus 360 eIvelLIs~GAdIN~k-~~G~Tp--------LH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~ 430 (672)
T PHA02730 360 PILRCMLDNGATMDKT-TDNNYP--------LHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFN 430 (672)
T ss_pred HHHHHHHHCCCCCCcC-CCCCcH--------HHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhc
Confidence 45566665 9999986 789999 799998875 899999999987 699999999999984 3323
Q ss_pred C---------CHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcc-cCCccchhccc
Q 007949 77 G---------HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCG 140 (583)
Q Consensus 77 g---------~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~-~~~t~L~~A~~ 140 (583)
+ ..+++++|+.+|++++.+|..|.| +|+|+. +.+++++|+++|++++. .+. .|.||||.|+.
T Consensus 431 n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~--~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 431 NCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT--TSRSIINTAIQKSSY 505 (672)
T ss_pred cccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC--CCCcCCcCHHHHHHH
Confidence 2 235699999999999999999999 577777 78999999999999888 564 58999999986
No 74
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.33 E-value=2e-12 Score=124.44 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=84.0
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCChhHHHHHHHhC-----CHHHHHHHHhcCC
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQWDSVALYYACLAG-----HLDAARMLLESGA 90 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g-----~~~~v~~Ll~~ga 90 (583)
-+|..|.+|.|+ ||||+..+|+++|+.||+.| ++++.++.-|+||+++|+... +..+|..|... .
T Consensus 260 vVNlaDsNGNTA--------LHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-g 330 (452)
T KOG0514|consen 260 VVNLADSNGNTA--------LHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-G 330 (452)
T ss_pred HhhhhcCCCCee--------eeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-c
Confidence 378899999999 79999999999999999976 788888888888877766432 34455555433 3
Q ss_pred CcCcc-CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccccc
Q 007949 91 ICSEH-TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (583)
Q Consensus 91 ~~~~~-~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 145 (583)
|+|++ ...|+| +..|+. +.++|+.|+..|+++++ ++.+|.|+|.+||++||..
T Consensus 331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNi--QDdDGSTALMCA~EHGhkE 387 (452)
T KOG0514|consen 331 DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNI--QDDDGSTALMCAAEHGHKE 387 (452)
T ss_pred CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcc--ccCCccHHHhhhhhhChHH
Confidence 44444 335666 344444 66677777777777777 5777777777777777743
No 75
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.33 E-value=2.4e-12 Score=143.82 Aligned_cols=118 Identities=31% Similarity=0.394 Sum_probs=104.4
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|++++.++..|.|| ||.||.+|++.+|++|+++|++++.+|+.|+||||.||..|+.+|+.+|+++|+++|.
T Consensus 530 ga~v~~~~~r~~Tp--------Lh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna 601 (1143)
T KOG4177|consen 530 GANVDLRTGRGYTP--------LHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA 601 (1143)
T ss_pred CCceehhcccccch--------HHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc
Confidence 88999999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCC---CCCCcccCCccchhccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPP---PLGPLQAALRDTFLGCG 140 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~---~~~~~~~~~t~L~~A~~ 140 (583)
.+.+|.| +|+++. +.+++++|...+.... .......|.+|..++-+
T Consensus 602 ~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 602 ADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEE 653 (1143)
T ss_pred ccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHH
Confidence 9999999 577776 8889999998887721 11145678888776553
No 76
>PHA02795 ankyrin-like protein; Provisional
Probab=99.32 E-value=5.1e-12 Score=129.80 Aligned_cols=154 Identities=10% Similarity=-0.008 Sum_probs=116.9
Q ss_pred hhhhcc-cCCCC------CCCCCCCCCCCCCCcHHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCH
Q 007949 9 IDAELD-EIDLD------ASDFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHL 79 (583)
Q Consensus 9 ~~~~~~-~~din------~~d~~g~tpl~~~~~~~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 79 (583)
++..+- |+++| .++..++|+ ||.|+. .|+.+++++|+.+|++++.++ +.||+|.|+..|+.
T Consensus 93 ~~~l~s~~~~~~~~~~~~~~~~~~~~~--------L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~~~~~ 162 (437)
T PHA02795 93 ISALVSKNYMEDIFSIIIKNCNSVQDL--------LLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGICKKES 162 (437)
T ss_pred HHHHHhcccccchhhhhhhccccccHH--------HHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHcCcH
Confidence 333443 77777 778888999 799999 999999999999999999854 58999999999999
Q ss_pred HHHHHHHhcCCCcCccC------CCCchH-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc-cchhh
Q 007949 80 DAARMLLESGAICSEHT------FDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ-FLEEA 149 (583)
Q Consensus 80 ~~v~~Ll~~ga~~~~~~------~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~-~l~~~ 149 (583)
+++++|+++|++..-.. ..|.++ |.++. +.+++++|+++|++++. ++..|.||||.|+..++. ..+-
T Consensus 163 eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~--kD~~G~TpLh~Aa~~g~~eiVel- 239 (437)
T PHA02795 163 SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ--LDAGGRTLLYRAIYAGYIDLVSW- 239 (437)
T ss_pred HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc--CCCCCCCHHHHHHHcCCHHHHHH-
Confidence 99999999998543221 234454 44444 68999999999999988 799999999999988873 1111
Q ss_pred hhhhcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhh
Q 007949 150 EVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSA 191 (583)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a 191 (583)
|+.. ++|+..+......|.|.++...
T Consensus 240 --------LL~~--------GAdIN~~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 240 --------LLEN--------GANVNAVMSNGYTCLDVAVDRG 265 (437)
T ss_pred --------HHHC--------CCCCCCcCCCCCCHHHHHHHcC
Confidence 2211 2366666666677888776543
No 77
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.32 E-value=7.9e-12 Score=123.47 Aligned_cols=117 Identities=22% Similarity=0.201 Sum_probs=94.8
Q ss_pred cchhhhcc-cCCCCCC----CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHH
Q 007949 7 STIDAELD-EIDLDAS----DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLD 80 (583)
Q Consensus 7 ~~~~~~~~-~~din~~----d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~ 80 (583)
-+++..+. |+|+|.+ +..|.|| ||+|+..|+.++++.|+++|+++|.++ ..|.||||+|+..|+.+
T Consensus 47 eivk~LL~~GAdiN~~~~~sd~~g~Tp--------Lh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~e 118 (300)
T PHA02884 47 DIIDAILKLGADPEAPFPLSENSKTNP--------LIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLK 118 (300)
T ss_pred HHHHHHHHCCCCccccCcccCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHH
Confidence 45566666 8999987 4689999 899999999999999999999999964 68999999999999999
Q ss_pred HHHHHHhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhc
Q 007949 81 AARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLG 138 (583)
Q Consensus 81 ~v~~Ll~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A 138 (583)
++++|+..|++++.++..|.|| |+|+. +..++.++. |.. .+..+.+|.+.+
T Consensus 119 ivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~ 172 (300)
T PHA02884 119 CLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE-----ISNFYKHPKKIL 172 (300)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc-----ccccccChhhhh
Confidence 9999999999999999999995 66655 555554443 322 234456666653
No 78
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.32 E-value=3.1e-12 Score=129.53 Aligned_cols=124 Identities=19% Similarity=0.189 Sum_probs=107.3
Q ss_pred hhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC
Q 007949 11 AELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG 89 (583)
Q Consensus 11 ~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 89 (583)
..+. |+++|..+.+|.|+ ||.+|...+.++|++|+++|++||.+|..||||||-|+..||..++++|+.+|
T Consensus 58 ~ll~~ga~~~~~n~DglTa--------lhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~g 129 (527)
T KOG0505|consen 58 KLLNRGASPNLCNVDGLTA--------LHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHG 129 (527)
T ss_pred HHhccCCCccccCCccchh--------HHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhh
Confidence 3444 78889999999999 79999999999999999999999999999999999999999999999999998
Q ss_pred CCcCccCCC-----------------------------------------------------------Cch-HHHHHh--
Q 007949 90 AICSEHTFD-----------------------------------------------------------GDR-CHYAAL-- 107 (583)
Q Consensus 90 a~~~~~~~~-----------------------------------------------------------g~t-~~~aa~-- 107 (583)
+++...|.. |.| +|.++.
T Consensus 130 A~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~G 209 (527)
T KOG0505|consen 130 ANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANG 209 (527)
T ss_pred hhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhh
Confidence 865433322 346 677766
Q ss_pred hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 108 ~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
..++..+|+..|.++.. ++.+|+||||.|...++.
T Consensus 210 y~e~~~lLl~ag~~~~~--~D~dgWtPlHAAA~Wg~~ 244 (527)
T KOG0505|consen 210 YTEVAALLLQAGYSVNI--KDYDGWTPLHAAAHWGQE 244 (527)
T ss_pred HHHHHHHHHHhccCccc--ccccCCCcccHHHHhhhH
Confidence 78889999999999988 799999999999877774
No 79
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.28 E-value=9.8e-12 Score=101.01 Aligned_cols=77 Identities=26% Similarity=0.482 Sum_probs=65.7
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+++..+. +.+++. |.|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 12 ~~~~ll~~~~~~~~----~~~~--------l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 79 (89)
T PF12796_consen 12 ILKFLLEKGADINL----GNTA--------LHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLL 79 (89)
T ss_dssp HHHHHHHTTSTTTS----SSBH--------HHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHCcCCCCC----CCCH--------HHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444444 556655 8889 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccC
Q 007949 87 ESGAICSEHT 96 (583)
Q Consensus 87 ~~ga~~~~~~ 96 (583)
++|++++.+|
T Consensus 80 ~~g~~~~~~n 89 (89)
T PF12796_consen 80 EHGADVNIRN 89 (89)
T ss_dssp HTTT-TTSS-
T ss_pred HcCCCCCCcC
Confidence 9999999875
No 80
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.26 E-value=1.7e-11 Score=110.23 Aligned_cols=117 Identities=17% Similarity=0.125 Sum_probs=101.0
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|...|..+-.+|+| +.+++-..+.+.+..+.. .-+|..|..|.|||.||+..||+.++++|++.||++++
T Consensus 119 ~~rgnevs~~p~s~--------~slsVhql~L~~~~~~~~--n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~ 188 (296)
T KOG0502|consen 119 GARGNEVSLMPWSP--------LSLSVHQLHLDVVDLLVN--NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA 188 (296)
T ss_pred cccCCccccccCCh--------hhHHHHHHHHHHHHHHhh--ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh
Confidence 66778888888999 688988888877655443 34899999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..+...+ +..|+. ..+||++|+..+.+++. .+-+|.|||.+|+-+||
T Consensus 189 lgk~resALsLAt~ggytdiV~lLL~r~vdVNv--yDwNGgTpLlyAvrgnh 238 (296)
T KOG0502|consen 189 LGKYRESALSLATRGGYTDIVELLLTREVDVNV--YDWNGGTPLLYAVRGNH 238 (296)
T ss_pred hhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce--eccCCCceeeeeecCCh
Confidence 8877777 455555 79999999999999999 78999999999998888
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.25 E-value=6.6e-11 Score=102.05 Aligned_cols=114 Identities=31% Similarity=0.388 Sum_probs=101.8
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCC
Q 007949 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (583)
Q Consensus 20 ~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 99 (583)
.+|..|.|| ||+|+..|+.++++.|+..|.+.+..+..|.||+|+|+..+..+++++|+..|++++..+..|
T Consensus 2 ~~~~~g~t~--------l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 73 (126)
T cd00204 2 ARDEDGRTP--------LHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDG 73 (126)
T ss_pred CcCcCCCCH--------HHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 356789999 899999999999999999999989999999999999999999999999999999999999889
Q ss_pred chH-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 100 DRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 100 ~t~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.++ |+++. +.+++++|+..+.+.+. .+..|.||++.|...++
T Consensus 74 ~~~l~~a~~~~~~~~~~~L~~~~~~~~~--~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 74 NTPLHLAARNGNLDVVKLLLKHGADVNA--RDKDGRTPLHLAAKNGH 118 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHhcCC
Confidence 985 66666 79999999999977776 67889999999986543
No 82
>PHA02730 ankyrin-like protein; Provisional
Probab=99.23 E-value=3.5e-11 Score=129.64 Aligned_cols=119 Identities=18% Similarity=0.143 Sum_probs=97.2
Q ss_pred CCC-CCCCCCCCCCCCCCcHHHHHHHHcC---CHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC--CHHHHHHHHhcCC
Q 007949 17 DLD-ASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARMLLESGA 90 (583)
Q Consensus 17 din-~~d~~g~tpl~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~ga 90 (583)
++| .+|..|+|| ||+|+..| +.+++++|+++|++++.+|..|+||||+|+..+ +.+++++|++.|+
T Consensus 32 ~in~~kd~~G~Ta--------Lh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~ 103 (672)
T PHA02730 32 NLSKHIDRRGNNA--------LHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYS 103 (672)
T ss_pred chhhhcCCCCCcH--------HHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCC
Confidence 677 889999999 79999997 599999999999999999999999999999977 7999999999965
Q ss_pred --CcCccCCCCch-H-HHHHh---hHHHHHHHHh-CCCCCCCCCCc---ccCCccchhcccccc
Q 007949 91 --ICSEHTFDGDR-C-HYAAL---NLKVRKLLKA-YEARPPPLGPL---QAALRDTFLGCGANR 143 (583)
Q Consensus 91 --~~~~~~~~g~t-~-~~aa~---~~~i~~~L~~-~~~~~~~~~~~---~~~~t~L~~A~~~~~ 143 (583)
+++..+..+.+ + .+++. +.+++++|+. .+.+++..... ..|.+|+.+|...++
T Consensus 104 ~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~ 167 (672)
T PHA02730 104 NASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR 167 (672)
T ss_pred CCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc
Confidence 45776755665 3 33332 7889999996 66776663111 378999999998777
No 83
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.21 E-value=5.6e-11 Score=135.80 Aligned_cols=121 Identities=16% Similarity=0.121 Sum_probs=105.3
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
+.+...++ |+++|.+|.+|+|| ||+|+..|+.++++.|+..++..+. ..|.++||+|+..|+.++++.|
T Consensus 572 ~~v~~Ll~~gadin~~d~~G~Tp--------L~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~L 641 (823)
T PLN03192 572 DCVLVLLKHACNVHIRDANGNTA--------LWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKEL 641 (823)
T ss_pred HHHHHHHhcCCCCCCcCCCCCCH--------HHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHH
Confidence 55556666 89999999999999 8999999999999999988765543 3577999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccC-Cccchhcc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGC 139 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~-~t~L~~A~ 139 (583)
+++|++++..|.+|.| +|.|+. +.+++++|+++|++++. .+..| .||+.++.
T Consensus 642 l~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~--~~~~g~~t~~~l~~ 697 (823)
T PLN03192 642 LKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK--ANTDDDFSPTELRE 697 (823)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHH
Confidence 9999999999999999 577776 89999999999999888 56666 88887764
No 84
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.20 E-value=5.5e-11 Score=92.00 Aligned_cols=100 Identities=21% Similarity=0.160 Sum_probs=88.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHh---hHHHH
Q 007949 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL---NLKVR 112 (583)
Q Consensus 36 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~---~~~i~ 112 (583)
.+.|+..+|.++-|+..+..|.|+|..- .|++|||+|+-+|..+++++|+.-||+++.+|+.|-||+.+|. +.++|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 4789999999999999999998888766 8999999999999999999999999999999999999766666 99999
Q ss_pred HHHHhCCCCCCCCCCcccCCccchhc
Q 007949 113 KLLKAYEARPPPLGPLQAALRDTFLG 138 (583)
Q Consensus 113 ~~L~~~~~~~~~~~~~~~~~t~L~~A 138 (583)
++|+.+|++... ..++|.+.+..+
T Consensus 84 klLL~~GAdrt~--~~PdG~~~~eat 107 (117)
T KOG4214|consen 84 KLLLQNGADRTI--HAPDGTALIEAT 107 (117)
T ss_pred HHHHHcCcccce--eCCCchhHHhhc
Confidence 999999999888 667777666543
No 85
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.20 E-value=3.6e-11 Score=87.48 Aligned_cols=50 Identities=32% Similarity=0.603 Sum_probs=42.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 5 lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 5 LHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 89999999999999999999999999999999999999999999999986
No 86
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.16 E-value=6.1e-11 Score=114.33 Aligned_cols=126 Identities=25% Similarity=0.259 Sum_probs=103.1
Q ss_pred hhhhcc--cCCCCCCCCCCCCCCCCCCcHHHHHHHHc-----CCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHH
Q 007949 9 IDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRA-----GDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLD 80 (583)
Q Consensus 9 ~~~~~~--~~din~~d~~g~tpl~~~~~~~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~ 80 (583)
....|| -+++|..|+.|.|| +++|+.. .+..+|..|.+.| |+|++- ..|.|+|++|+.+|+.+
T Consensus 284 V~~LLDSgvC~VD~qNrAGYtp--------iMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d 354 (452)
T KOG0514|consen 284 VSILLDSGVCDVDQQNRAGYTP--------VMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVD 354 (452)
T ss_pred HHHHhccCcccccccccccccH--------HHHHHHHhhcchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHH
Confidence 344555 48899999999999 7888764 4677888888776 788875 57999999999999999
Q ss_pred HHHHHHhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhC-CCCCCCCCCcccCCccchhcccccccc
Q 007949 81 AARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAY-EARPPPLGPLQAALRDTFLGCGANRQF 145 (583)
Q Consensus 81 ~v~~Ll~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~-~~~~~~~~~~~~~~t~L~~A~~~~~~~ 145 (583)
+++.|+..|||+|++|.+|-|+ ..||. +.+|+++|+.. +++..+ .+.+|.|+|-.|-+.+|..
T Consensus 355 ~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL--tD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 355 MVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL--TDVDGSTALSIALEAGHRE 421 (452)
T ss_pred HHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee--ecCCCchhhhhHHhcCchH
Confidence 9999999999999999999995 44444 89999998854 456666 7889999999999988843
No 87
>PHA02792 ankyrin-like protein; Provisional
Probab=99.16 E-value=1.1e-10 Score=124.39 Aligned_cols=122 Identities=14% Similarity=0.036 Sum_probs=101.5
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC--hhHHHHHHHhCCH---H
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWD--SVALYYACLAGHL---D 80 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g--~t~L~~A~~~g~~---~ 80 (583)
.+++..++ |++++ + ..+..+ ++.||..|+.+++++|+++|++++.+|..| .||||+|+..+.. +
T Consensus 322 eiIK~LId~Ga~~~-r-~~~~n~--------~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~ 391 (631)
T PHA02792 322 NVIKCMIDEGATLY-R-FKHINK--------YFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLS 391 (631)
T ss_pred HHHHHHHHCCCccc-c-CCcchH--------HHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHH
Confidence 56677776 77764 1 123333 789999999999999999999999998774 6999998776654 3
Q ss_pred HHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccc
Q 007949 81 AARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 81 ~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~ 140 (583)
+++.|+++|++++.+|..|.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+.
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~--kD~~G~TpL~~A~~ 452 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI--TTKYGSTCIGICVI 452 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHH
Confidence 688899999999999999998 577776 89999999999999887 78999999999974
No 88
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.13 E-value=1.5e-10 Score=123.14 Aligned_cols=112 Identities=21% Similarity=0.289 Sum_probs=99.8
Q ss_pred CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCcc---------CC--------------CChhHHHHHHHhCC
Q 007949 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR---------DQ--------------WDSVALYYACLAGH 78 (583)
Q Consensus 22 d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~---------d~--------------~g~t~L~~A~~~g~ 78 (583)
...|.|| ||.|..+.+.++|+.|++.||||+++ |. +|..||-+|+..++
T Consensus 181 eY~GqSa--------LHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq 252 (782)
T KOG3676|consen 181 EYYGQSA--------LHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ 252 (782)
T ss_pred hhcCcch--------HHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC
Confidence 3568888 89999999999999999999998763 21 47899999999999
Q ss_pred HHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCC--CCCCCCcccCCccchhcccccc
Q 007949 79 LDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEAR--PPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 79 ~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~--~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+++++|+++|||++.+|.+|+| +|.++. ..++.++++.+|++ ..+ ++..|.|||.+|+.-++
T Consensus 253 ~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v--~N~qgLTPLtLAaklGk 320 (782)
T KOG3676|consen 253 PEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV--RNNQGLTPLTLAAKLGK 320 (782)
T ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc--cccCCCChHHHHHHhhh
Confidence 99999999999999999999999 777776 78899999999999 444 78999999999998777
No 89
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.12 E-value=7.2e-11 Score=86.38 Aligned_cols=54 Identities=33% Similarity=0.498 Sum_probs=31.5
Q ss_pred HHHcC-CCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHH
Q 007949 52 ILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYA 105 (583)
Q Consensus 52 Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~a 105 (583)
|+++| ++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||...
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~ 55 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHY 55 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHh
Confidence 56777 8899999999999999999999999999999999999999999996443
No 90
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.12 E-value=1.3e-10 Score=131.91 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=95.0
Q ss_pred CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC--------------CCChhHHHHHHHhCCHHHHHHHHh
Q 007949 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--------------QWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 22 d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
+..|.|| ||+||..|+.++++.|+++|++++.++ ..|+||||+|+..|+.+++++|++
T Consensus 125 ~~~G~Tp--------LhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~ 196 (743)
T TIGR00870 125 FTPGITA--------LHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE 196 (743)
T ss_pred cCCCCcH--------HHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhc
Confidence 3468888 899999999999999999999998653 258999999999999999999999
Q ss_pred cCCCcCccCCCCch-HHHHHhh-----------HHHHHHHHhCCCCCCC-----CCCcccCCccchhcccccccc
Q 007949 88 SGAICSEHTFDGDR-CHYAALN-----------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGANRQF 145 (583)
Q Consensus 88 ~ga~~~~~~~~g~t-~~~aa~~-----------~~i~~~L~~~~~~~~~-----~~~~~~~~t~L~~A~~~~~~~ 145 (583)
+|+|++.+|..|+| +|.++.. ..+.++++..+..... ...+..|.||||+|+..++.-
T Consensus 197 ~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~ 271 (743)
T TIGR00870 197 DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV 271 (743)
T ss_pred CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCcc
Confidence 99999999999999 5766663 2356667766655322 115778999999999888743
No 91
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.11 E-value=1.7e-10 Score=107.81 Aligned_cols=109 Identities=19% Similarity=0.259 Sum_probs=96.3
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+.+..+. |+-+|..+...-|| ||+|+..||.++|+.|+++.+++|+.+..|+|||||||..|.-.+++-|+
T Consensus 49 ivemll~rgarvn~tnmgddtp--------lhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli 120 (448)
T KOG0195|consen 49 IVEMLLSRGARVNSTNMGDDTP--------LHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLI 120 (448)
T ss_pred HHHHHHhcccccccccCCCCcc--------hhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHH
Confidence 3455565 88999999988999 79999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCchHHHHHh---hHHHHHHHHhCCCCCCC
Q 007949 87 ESGAICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPP 124 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t~~~aa~---~~~i~~~L~~~~~~~~~ 124 (583)
..|+.+++.++.|.||...|. ...+.++..++|.+++.
T Consensus 121 ~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 121 SCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred hccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999888776 45556666677877654
No 92
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.11 E-value=1.5e-10 Score=131.51 Aligned_cols=126 Identities=17% Similarity=0.190 Sum_probs=97.1
Q ss_pred cchhhhcc---cCCCCCCCCCCCCCCCCCCcHHHH-HHHHcCCHHHHHHHHHcCC-------------------------
Q 007949 7 STIDAELD---EIDLDASDFSSSVPLKKVPNGDVF-EASRAGDVDRLRYILESGV------------------------- 57 (583)
Q Consensus 7 ~~~~~~~~---~~din~~d~~g~tpl~~~~~~~L~-~A~~~g~~~~v~~Ll~~g~------------------------- 57 (583)
+++...++ +.++|..|..|+|| || .|+..++.++++.|+.+|+
T Consensus 31 ~~v~~lL~~~~~~~in~~d~~G~t~--------Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~ 102 (743)
T TIGR00870 31 ASVYRDLEEPKKLNINCPDRLGRSA--------LFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILL 102 (743)
T ss_pred HHHHHHhccccccCCCCcCccchhH--------HHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHH
Confidence 45555554 68899999999999 46 5666666666666665552
Q ss_pred -------C------CCc----cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC--------------CCCch-HHHH
Q 007949 58 -------N------VNA----RDQWDSVALYYACLAGHLDAARMLLESGAICSEHT--------------FDGDR-CHYA 105 (583)
Q Consensus 58 -------~------~~~----~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--------------~~g~t-~~~a 105 (583)
+ ++. .+..|.||||+|+..|+.+++++|+++|++++.++ ..|.+ +|.+
T Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~A 182 (743)
T TIGR00870 103 HLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAA 182 (743)
T ss_pred HHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHH
Confidence 0 001 12359999999999999999999999999998653 24677 5666
Q ss_pred Hh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccc
Q 007949 106 AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (583)
Q Consensus 106 a~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~ 142 (583)
+. +.+++++|+++|++++. .+..|.||||+|+.++
T Consensus 183 a~~~~~~iv~lLl~~gadin~--~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 183 ACLGSPSIVALLSEDPADILT--ADSLGNTLLHLLVMEN 219 (743)
T ss_pred HHhCCHHHHHHHhcCCcchhh--HhhhhhHHHHHHHhhh
Confidence 66 89999999999998777 7889999999999875
No 93
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.10 E-value=1.6e-10 Score=117.33 Aligned_cols=126 Identities=20% Similarity=0.220 Sum_probs=108.1
Q ss_pred ccchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCcc----------------------
Q 007949 6 QSTIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR---------------------- 62 (583)
Q Consensus 6 ~~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~---------------------- 62 (583)
+-.+...++ |++||..|..|||| +|.|+.+|+..++++|+..|+++...
T Consensus 86 ~e~v~~l~e~ga~Vn~~d~e~wtP--------lhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~ 157 (527)
T KOG0505|consen 86 LEMVKFLVENGANVNAQDNEGWTP--------LHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLET 157 (527)
T ss_pred HHHHHHHHHhcCCccccccccCCc--------chhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHH
Confidence 345666676 99999999999999 69999999999999999988643111
Q ss_pred -------------------------------------CCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchH-HH
Q 007949 63 -------------------------------------DQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HY 104 (583)
Q Consensus 63 -------------------------------------d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~-~~ 104 (583)
+..|.|+||.|+..|..+++++|+..|.+++++|.+|++| |.
T Consensus 158 ~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHA 237 (527)
T KOG0505|consen 158 EMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHA 237 (527)
T ss_pred HHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccH
Confidence 2247899999999999999999999999999999999995 66
Q ss_pred HHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 105 aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
+|. ..++.++|+.+|++.+. ....|.||+.+|.+.
T Consensus 238 AA~Wg~~~~~elL~~~ga~~d~--~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 238 AAHWGQEDACELLVEHGADMDA--KTKMGETPLDVADEE 274 (527)
T ss_pred HHHhhhHhHHHHHHHhhcccch--hhhcCCCCccchhhh
Confidence 666 78899999999999888 688999999987753
No 94
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.08 E-value=1.1e-10 Score=85.32 Aligned_cols=51 Identities=31% Similarity=0.485 Sum_probs=33.8
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHH
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYA 73 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 73 (583)
..++|.+|..|.|| ||+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 6 ~~~~n~~d~~G~T~--------LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDKYGNTP--------LHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---TTS--H--------HHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred cCCCcCcCCCCCcH--------HHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 38899999999999 8999999999999999999999999999999999987
No 95
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.05 E-value=9.3e-10 Score=122.18 Aligned_cols=103 Identities=26% Similarity=0.293 Sum_probs=90.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHH
Q 007949 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i 111 (583)
..|+.|+..|+.+.++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 4588999999999999999999999999999999999999999999999999999999999999999 577766 8999
Q ss_pred HHHHHhC-------CCCCCCCCCcccCCccchhcc
Q 007949 112 RKLLKAY-------EARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 112 ~~~L~~~-------~~~~~~~~~~~~~~t~L~~A~ 139 (583)
+++|+.+ |++... ....|.+|+..+.
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~--~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKP--DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCc--cccCCCCccchhh
Confidence 9999998 666655 4566777765444
No 96
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.02 E-value=2.1e-10 Score=120.35 Aligned_cols=117 Identities=21% Similarity=0.183 Sum_probs=107.7
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 96 (583)
.+|..|.+|.|+ ||.||.+|+.++++.|+++.+-++.+|..|.+|||+|++.|+.++++.|+.++..+|+.+
T Consensus 41 s~n~qd~~gfTa--------lhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~ 112 (854)
T KOG0507|consen 41 SHNLQDYSGFTL--------LHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN 112 (854)
T ss_pred cccccCccchhH--------HHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc
Confidence 456667777777 799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 97 FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 97 ~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..|.+ +|.+|. +.+++.+|+.+|++... .+..+.|++.+||+.++
T Consensus 113 ~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i--~nns~~t~ldlA~qfgr 160 (854)
T KOG0507|consen 113 IENETPLHLAAQHGHLEVVFYLLKKNADPFI--RNNSKETVLDLASRFGR 160 (854)
T ss_pred ccCcCccchhhhhcchHHHHHHHhcCCCccc--cCcccccHHHHHHHhhh
Confidence 99998 677777 89999999999999888 78999999999998877
No 97
>PHA02792 ankyrin-like protein; Provisional
Probab=99.02 E-value=9.6e-10 Score=117.40 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=90.9
Q ss_pred cchhhhcc-cCCCCCCCCCC--CCCCCCCCcHHHHHHHHcCCH---HHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHH
Q 007949 7 STIDAELD-EIDLDASDFSS--SVPLKKVPNGDVFEASRAGDV---DRLRYILESGVNVNARDQWDSVALYYACLAGHLD 80 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g--~tpl~~~~~~~L~~A~~~g~~---~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~ 80 (583)
-+++..+. |+|+|.+|..| .|| ||.|+..+.. .+++.|+++|+++|.+|..|+||||+|+..++.+
T Consensus 353 eIVelLIs~GADIN~kD~~g~~~Tp--------Lh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~e 424 (631)
T PHA02792 353 KVVEYILKNGNVVVEDDDNIINIMP--------LFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVS 424 (631)
T ss_pred HHHHHHHHcCCchhhhcCCCCChhH--------HHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHH
Confidence 45566665 99999999886 467 7887776654 3578889999999999999999999999999999
Q ss_pred HHHHHHhcCCCcCccCCCCchH-HHHHh------------hHHHHHHHHhCCCCCC
Q 007949 81 AARMLLESGAICSEHTFDGDRC-HYAAL------------NLKVRKLLKAYEARPP 123 (583)
Q Consensus 81 ~v~~Ll~~ga~~~~~~~~g~t~-~~aa~------------~~~i~~~L~~~~~~~~ 123 (583)
++++|+++|++++.++..|.|| |+|+. ..+++++|+++++++.
T Consensus 425 ivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 425 LVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 9999999999999999999995 55543 2567899999887654
No 98
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.01 E-value=2.8e-09 Score=102.24 Aligned_cols=120 Identities=29% Similarity=0.411 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCC-----HHHHHHHHhcCC
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-----LDAARMLLESGA 90 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-----~~~v~~Ll~~ga 90 (583)
...+..+..+.++ +|.++..+...++..++..|++++.+|..|.||||+|+..|+ .++++.|++.|+
T Consensus 64 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~ 135 (235)
T COG0666 64 RHLAARDLDGRLP--------LHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGA 135 (235)
T ss_pred cccccCCccccCH--------HHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCC
Confidence 3344555567777 899999999999999999999999999999999999999999 999999999999
Q ss_pred ---CcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccccc
Q 007949 91 ---ICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (583)
Q Consensus 91 ---~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 145 (583)
+.+..+..|.| +|+++. +.+++.+|+..|+++.. .+..|.|+++.||..++..
T Consensus 136 ~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~--~~~~g~t~l~~a~~~~~~~ 194 (235)
T COG0666 136 DLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS--RNSYGVTALDPAAKNGRIE 194 (235)
T ss_pred CCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc--cccCCCcchhhhcccchHH
Confidence 67777999999 577777 77899999999998888 6899999999999877743
No 99
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.01 E-value=4.9e-10 Score=117.72 Aligned_cols=130 Identities=19% Similarity=0.138 Sum_probs=109.5
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++.-.++ .+-++..|..|.+| ||+|++.|+.+++++++.++..+|+.+..|.||||+|+..||.+++.+|
T Consensus 63 ~is~llle~ea~ldl~d~kg~~p--------lhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~L 134 (854)
T KOG0507|consen 63 QISKLLLDYEALLDLCDTKGILP--------LHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYL 134 (854)
T ss_pred HHHHHHhcchhhhhhhhccCcce--------EEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHH
Confidence 44444444 67788888999999 7999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchHHHHHh---hHHHHHHHHhCCCCCCC------CCCcccCCccchhccccccc
Q 007949 86 LESGAICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPP------LGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~~~aa~---~~~i~~~L~~~~~~~~~------~~~~~~~~t~L~~A~~~~~~ 144 (583)
+.+|+++-.+|.++.|+|.+|. ..+++++|+...-.... ..+...+.+|+|+|..++|.
T Consensus 135 l~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~ 202 (854)
T KOG0507|consen 135 LKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHV 202 (854)
T ss_pred HhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchH
Confidence 9999999999999999998888 78889998875322111 11334578899999999983
No 100
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.99 E-value=1.1e-09 Score=115.60 Aligned_cols=122 Identities=22% Similarity=0.341 Sum_probs=102.2
Q ss_pred CCcEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcC-CcccC-----ChhhHH
Q 007949 170 PPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEI-----AVDDME 242 (583)
Q Consensus 170 ~~Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i-----~~~~~~ 242 (583)
..|+.+.. +|+.++|||++|++|+.||..||..-|.|+....+..-.++.+.++.+|+|+|+ ++..+ ..+.+.
T Consensus 710 ~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~~w~E~sS~t~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~~dF~~ 789 (1267)
T KOG0783|consen 710 TMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQFVWMESSSITVNLSPLTVEHMSIVLDYLYSDDKVELFKDLKESDFMF 789 (1267)
T ss_pred ceeEEEEecCCcCcccceeEeeeHHHHHHHHHHHHHhhhccceeecCcchHHHHHHHHHHHHccchHHHHhccchhhhhH
Confidence 34666665 778899999999999999999999999999887777767779999999999994 55432 334577
Q ss_pred HHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 243 DLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 243 ~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
+++.+|+.+-+..|++.++ ++-.++.||..|++.+|...|..|++.|..
T Consensus 790 ~il~iaDqlli~~Lk~Ice~~ll~kl~lk~~~~llefaamY~ak~L~~~C~dfic~N~~ 848 (1267)
T KOG0783|consen 790 EILSIADQLLILELKSICEQSLLRKLNLKTLPTLLEFAAMYHAKELYSRCIDFICHNIE 848 (1267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhHHHHHHHHHHHHHHhHH
Confidence 8999998887888888876 567788899999999999999999999853
No 101
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.99 E-value=4.1e-09 Score=102.15 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=76.1
Q ss_pred EeEehhHHHHhhccHHHHHhhcCCCCCCc----ccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHHHHhHhchH-
Q 007949 180 RPIEAHRVILSARSVFFRRKFETDWRYRN----EIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVCKCE- 254 (583)
Q Consensus 180 ~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~----~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~a~~~~~~- 254 (583)
.++|||++++ .|+.||+.||.|++.|+. .....++.....+.+.+++|+|++..++.++-..+++-+|....++
T Consensus 301 ~RyP~hla~i-~R~eyfk~mf~g~f~e~s~n~~~p~lslp~~~~~vveI~lr~lY~d~tdi~~~~A~dvll~ad~lal~~ 379 (516)
T KOG0511|consen 301 DRYPAHLARI-LRVEYFKSMFVGDFIESSVNDTRPGLSLPSLADVVVEIDLRNLYCDQTDIIFDVASDVLLFADKLALAD 379 (516)
T ss_pred ccccHHHHHH-HHHHHHHHHhccchhhhcCCccccccccchHHHHHHHHHHHHhhcccccchHHHHhhHHHHhhHhhhhh
Confidence 4688888888 478888889988887743 2345677778889999999999999999999888888777544222
Q ss_pred -H-HHHH-----------HH--HHHHHHHHHHHcCChhHHHHHHHHHHhcC
Q 007949 255 -S-LQRI-----------IE--KELIHQKYAEYKALRDVDNSQKRFILQGS 290 (583)
Q Consensus 255 -~-l~~~-----------l~--~~l~~~~~a~~~~~~~l~~~~~~~i~~~~ 290 (583)
. |+.. ++ +.+.+...+.......+...+..++..+.
T Consensus 380 dr~Lkt~as~~itq~~e~id~y~V~dIl~~~wd~~~~rlEqfa~~~~a~hl 430 (516)
T KOG0511|consen 380 DRLLKTAASAEITQWLELIDMYGVLDILEYCWDLVACRLEQFAETHEARHL 430 (516)
T ss_pred hhhhhhhhhHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 1 1111 11 35555556666666666666666665553
No 102
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.93 E-value=3e-09 Score=99.58 Aligned_cols=93 Identities=24% Similarity=0.330 Sum_probs=80.7
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA-RDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
.+|.+|..|.++ |..|+-.|+.+.++.|++.|+|+|. ++..++||||+|+..|+.++.++|++.|+.....
T Consensus 37 ~vn~~D~sGMs~--------LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~v 108 (396)
T KOG1710|consen 37 QVNQRDPSGMSV--------LAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLV 108 (396)
T ss_pred hhhccCCCcccH--------HHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccc
Confidence 389999999999 6889999999999999999999988 4578899999999999999999999999999999
Q ss_pred CCCCchH-HHHHh--hHHHHHHHHh
Q 007949 96 TFDGDRC-HYAAL--NLKVRKLLKA 117 (583)
Q Consensus 96 ~~~g~t~-~~aa~--~~~i~~~L~~ 117 (583)
|.-|+|+ -.||. +.+.|.++-+
T Consensus 109 NsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 109 NSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred cchhhhHHHHHHHhcchHHHHHHhc
Confidence 9999994 55555 7777776543
No 103
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.86 E-value=1e-08 Score=98.36 Aligned_cols=97 Identities=29% Similarity=0.371 Sum_probs=89.3
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC-----HHHHHHHHHcCC---CCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGD-----VDRLRYILESGV---NVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~-----~~~v~~Ll~~g~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
|++++.+|..|.|| +|+|+..|+ .++++.|++.|+ ..+.+|..|+||||+|+..|+.++++.|+
T Consensus 96 ~~~~~~~~~~g~t~--------l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll 167 (235)
T COG0666 96 GADVNAKDADGDTP--------LHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL 167 (235)
T ss_pred CCCcccccCCCCcH--------HHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHH
Confidence 88999999999999 799999999 999999999999 56667999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCC
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYE 119 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~ 119 (583)
+.|++++..+..|.| ++.++. +..++..++..+
T Consensus 168 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 168 EAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999 566666 788888888866
No 104
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.85 E-value=4.4e-09 Score=105.89 Aligned_cols=117 Identities=21% Similarity=0.193 Sum_probs=93.0
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~ 113 (583)
|.-|+..|-+++|+..+..-.|+...+..|.||||.|...||.+||++|+++|+++|..|.+||| +|.||. +..+.+
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 77888999999999999887788888889999999999999999999999999999999999998 466666 777889
Q ss_pred HHHhCCCCCCCCCCcccCCccchhccccccccchhhhhhhc
Q 007949 114 LLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLG 154 (583)
Q Consensus 114 ~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~ 154 (583)
.|++.|+.+-.. +..++.|+...+-+....|-+=.++.+.
T Consensus 634 qLVe~GaavfAs-TlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 634 QLVESGAAVFAS-TLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHhccceEEee-ecccccchhhhcchhhhhHHHHHHHHHH
Confidence 999999876553 5677788876644444455444444443
No 105
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.83 E-value=6.9e-09 Score=115.28 Aligned_cols=89 Identities=22% Similarity=0.292 Sum_probs=80.3
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
.++..+. |+++|.+|..|+|| ||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 97 ~vk~LL~~Gadin~~d~~G~Tp--------Lh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll 168 (664)
T PTZ00322 97 GARILLTGGADPNCRDYDGRTP--------LHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168 (664)
T ss_pred HHHHHHHCCCCCCCcCCCCCcH--------HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence 3444555 89999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hc-------CCCcCccCCCCchHHH
Q 007949 87 ES-------GAICSEHTFDGDRCHY 104 (583)
Q Consensus 87 ~~-------ga~~~~~~~~g~t~~~ 104 (583)
.+ |++++..+..|.++..
T Consensus 169 ~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 169 RHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred hCCCcccccCCCCCccccCCCCccc
Confidence 98 8888888888876533
No 106
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.83 E-value=8.3e-09 Score=103.99 Aligned_cols=87 Identities=23% Similarity=0.234 Sum_probs=75.4
Q ss_pred CCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCC-CCchHHHHHh--
Q 007949 31 KVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF-DGDRCHYAAL-- 107 (583)
Q Consensus 31 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~~~aa~-- 107 (583)
.+|.+.||-|+..||.++|++|++.|+|+|+.|.+||||||.|+.+++..+.+.|++.|+-+-+... ++.|+..-|.
T Consensus 581 dEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~ 660 (752)
T KOG0515|consen 581 DEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEM 660 (752)
T ss_pred ccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchh
Confidence 5799999999999999999999999999999999999999999999999999999999987776654 5557655554
Q ss_pred ---hHHHHHHHHh
Q 007949 108 ---NLKVRKLLKA 117 (583)
Q Consensus 108 ---~~~i~~~L~~ 117 (583)
...+.++|-.
T Consensus 661 eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 661 EEGYDQCSQYLYG 673 (752)
T ss_pred hhhHHHHHHHHHH
Confidence 5667777764
No 107
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=98.81 E-value=2.3e-09 Score=89.59 Aligned_cols=96 Identities=18% Similarity=0.299 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCchhHHHHHhcCCCCCCCccccc-cCCCCCCccccCCCccchHHHHHH
Q 007949 458 LCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRT-TVPSAPGAIINVDQGNLLDDLREK 536 (583)
Q Consensus 458 ~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~~-~~~~~~~~~ee~d~~e~~~~~~~~ 536 (583)
|+.++.+|..|++..|.+.|.+||..||..+..+++|.+|+.+ .+..+ .++++.+.+| .+++ +++.+
T Consensus 1 C~~i~~~A~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~L~~~-------~l~~iL~~~~l~v~~E----~~v~-~av~~ 68 (103)
T PF07707_consen 1 CLSIYRLAEKYGLEELAEACLRFIAKNFNEVSKSDEFLELPFD-------QLIEILSSDDLNVSSE----DDVF-EAVLR 68 (103)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHTHHHHTTSHHHHCS-HH-------HHHHHHHTSS--ECTC----CCHH-HHHHH
T ss_pred ChhHHHHHHHcChHHHHHHHHHHHHHHHHHHccchhhhcCCHH-------HHHHHHhccccccccH----HHHH-HHHHH
Confidence 7899999999999999999999999999999999999988766 22222 4566666677 6777 89999
Q ss_pred HHHHHhhhhhcchhhHHhHHHHHHHHHHHhhh
Q 007949 537 WLEAEAAELDKRDESALMFDKRLEMLMQVAKD 568 (583)
Q Consensus 537 Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (583)
|+++++.. |.+....+++.+|++..+.+.
T Consensus 69 W~~~~~~~---r~~~~~~Ll~~iR~~~l~~~~ 97 (103)
T PF07707_consen 69 WLKHNPEN---REEHLKELLSCIRFPLLSPEE 97 (103)
T ss_dssp HHHCTHHH---HTTTHHHHHCCCHHHCT-HHH
T ss_pred HHHhCHHH---HHHHHHHHHHhCCcccCCHHH
Confidence 99999874 456778888889988776553
No 108
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=98.78 E-value=2e-08 Score=98.44 Aligned_cols=128 Identities=17% Similarity=0.221 Sum_probs=111.6
Q ss_pred ccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEE----EcCCCCHHHHHHHhhhhcCC
Q 007949 157 GVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRF----SREKLSYPALYGLIHFFYSD 232 (583)
Q Consensus 157 ~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i----~l~~v~~~~~~~lL~ylYtg 232 (583)
.+..++..+ ||++..=|.+...||.-| ..|+||++||.|.|+|+....| +.+.|+..++..++.-+|.+
T Consensus 62 ~lf~q~enS------Dv~l~alg~eWrlHk~yL-~QS~yf~smf~Gtw~es~~~iIqleI~Dp~Id~~al~~a~gsLY~d 134 (488)
T KOG4682|consen 62 NLFLQGENS------DVILEALGFEWRLHKPYL-FQSEYFKSMFSGTWKESSMNIIQLEIPDPNIDVVALQVAFGSLYRD 134 (488)
T ss_pred HHHhcCCCc------ceehhhccceeeeeeeee-eccHHHHHHhccccChhhCceEEEEcCCCcccHHHHHHHHhhhhhh
Confidence 455567766 999999999999999999 5899999999999999866544 45579999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
++.|..+.+..++.+|..++++.|.+.|. +....+..+..|+...+.+.|..++..|+.
T Consensus 135 EveI~l~dv~gvlAaA~~lqldgl~qrC~evMie~lspkta~~yYea~ckYgle~vk~kc~ewl~~nl~ 203 (488)
T KOG4682|consen 135 EVEIKLSDVVGVLAAACLLQLDGLIQRCGEVMIETLSPKTACGYYEAACKYGLESVKKKCLEWLLNNLM 203 (488)
T ss_pred heeccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcChhhhhHhhhhhhhhhhHHHHHHHHHHHHHhhH
Confidence 99999999999999998888777777654 567888899999999999999999988865
No 109
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.77 E-value=5.1e-08 Score=83.77 Aligned_cols=100 Identities=34% Similarity=0.509 Sum_probs=85.4
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+++..+. +.+++..+..|.+| +|+|+..++.++++.|+..|++++..+..|.||+|+|+..++.+++++|+
T Consensus 22 ~i~~li~~~~~~~~~~~~g~~~--------l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~ 93 (126)
T cd00204 22 VVKLLLENGADVNAKDNDGRTP--------LHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLL 93 (126)
T ss_pred HHHHHHHcCCCCCccCCCCCcH--------HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 3444444 56668889999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCchH-HHHHh--hHHHHHHH
Q 007949 87 ESGAICSEHTFDGDRC-HYAAL--NLKVRKLL 115 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L 115 (583)
.+|.+.+..+..|.++ +.+.. +.+++++|
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 94 KHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 9999999999999985 44444 66666665
No 110
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.71 E-value=3.1e-08 Score=71.89 Aligned_cols=51 Identities=35% Similarity=0.537 Sum_probs=41.4
Q ss_pred ChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHH
Q 007949 66 DSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLK 116 (583)
Q Consensus 66 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~ 116 (583)
|+||||+|+..|+.+++++|+++|++++.+|.+|.| +|+|+. +.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999 577777 888998885
No 111
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.67 E-value=1.9e-08 Score=109.17 Aligned_cols=128 Identities=18% Similarity=0.209 Sum_probs=112.5
Q ss_pred hhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCChhHHHHHHHhCCHHHHHHHH
Q 007949 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 9 ~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
.+-++. |+++..+|+.|.+| |+.|+-.||..+|+.|+++.++++.+ |..+.|+|.+||..|..+++++|+
T Consensus 773 vellv~rganiehrdkkgf~p--------lImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl 844 (2131)
T KOG4369|consen 773 VELLVVRGANIEHRDKKGFVP--------LIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL 844 (2131)
T ss_pred HHHHHHhcccccccccccchh--------hhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence 344454 79999999999999 79999999999999999999998774 678899999999999999999999
Q ss_pred hcCCCcCccCCCCchHHHHHh---hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc
Q 007949 87 ESGAICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t~~~aa~---~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
..|++-..++-...||.-.+. ..+++.+|+.+|..++..+..+.|..||.+|..++|.
T Consensus 845 ~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~ 905 (2131)
T KOG4369|consen 845 NAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQ 905 (2131)
T ss_pred HhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcccc
Confidence 999999888888888655555 8999999999998888766778899999999998883
No 112
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.59 E-value=1.1e-07 Score=95.18 Aligned_cols=97 Identities=21% Similarity=0.149 Sum_probs=84.0
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 96 (583)
+-.+|++|.++ ++++.+||..++.|+.++.-.|+..|+++|..+ ..|.||||.|++.|+...+++|+-.|||++..|
T Consensus 120 ~~~rDdD~~~~--~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d 197 (669)
T KOG0818|consen 120 LPCRDDDSVTA--KDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD 197 (669)
T ss_pred CCCCCcchhhH--HHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC
Confidence 45667777666 678899999999999999999999999999987 579999999999999999999999999999999
Q ss_pred CCCchHHHHHh---hHHHHHHHH
Q 007949 97 FDGDRCHYAAL---NLKVRKLLK 116 (583)
Q Consensus 97 ~~g~t~~~aa~---~~~i~~~L~ 116 (583)
.+|.||...|+ +.++..-|+
T Consensus 198 ~~GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 198 SSGMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred CCCCcHHHHHHhcCchHHHHHHH
Confidence 99999877777 555544444
No 113
>PF13606 Ank_3: Ankyrin repeat
Probab=98.53 E-value=1.1e-07 Score=59.26 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=26.9
Q ss_pred CChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 65 WDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 65 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
+|+||||+||..|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999998873
No 114
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.41 E-value=3.8e-07 Score=58.55 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=29.0
Q ss_pred CChhHHHHHHHhCCHHHHHHHHhcCCCcCccCC
Q 007949 65 WDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (583)
Q Consensus 65 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 97 (583)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 488999999999999999999999999988763
No 115
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=98.38 E-value=1.6e-07 Score=77.85 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=71.9
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHH
Q 007949 458 LCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKW 537 (583)
Q Consensus 458 ~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~W 537 (583)
|+.++.+|..|++..|.+.|.+||.+||..+.++++|..|+.+ .+..+ +.++++.+..| .+++ +++.+|
T Consensus 1 c~~i~~~a~~~~~~~L~~~~~~~i~~nf~~~~~~~~f~~L~~~----~l~~i--L~~d~l~v~~E----~~v~-~av~~W 69 (101)
T smart00875 1 CLGIRRFAELYGLEELLEKALRFILKNFLEVAQSEEFLELSLE----QLLSL--LSSDDLNVPSE----EEVF-EAVLRW 69 (101)
T ss_pred CHhHHHHHHHhChHHHHHHHHHHHHHHHHHHhcCcHHhcCCHH----HHHHH--hCcccCCCCCH----HHHH-HHHHHH
Confidence 5678999999999999999999999999999999999977654 22222 24556666667 5666 999999
Q ss_pred HHHHhhhhhcchhhHHhHHHHHHHHHHHhh
Q 007949 538 LEAEAAELDKRDESALMFDKRLEMLMQVAK 567 (583)
Q Consensus 538 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (583)
++++... +. +...+++-+|++..+.+
T Consensus 70 ~~~~~~~---~~-~~~~ll~~ir~~~~~~~ 95 (101)
T smart00875 70 VKHDPER---RR-HLPELLSHVRFPLLSPE 95 (101)
T ss_pred HHCCHHH---HH-HHHHHHHhCCCCCCCHH
Confidence 9999732 32 56667777777665443
No 116
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.32 E-value=7.5e-07 Score=78.91 Aligned_cols=135 Identities=17% Similarity=0.215 Sum_probs=100.5
Q ss_pred CCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC-CCcCccCCCCchHHHHHh---hHHHHHHHHhCCCCCCCCCCcccC
Q 007949 56 GVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPPLGPLQAA 131 (583)
Q Consensus 56 g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t~~~aa~---~~~i~~~L~~~~~~~~~~~~~~~~ 131 (583)
+.++|..|..||||++.|+..|..+.+.+|+.+| +++...|..|.+....|. ..+++..|.++..+... +....
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~--p~nss 79 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH--PMNSS 79 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC--cccCC
Confidence 4579999999999999999999999999999999 999999999998666666 78889999887665554 34444
Q ss_pred CccchhccccccccchhhhhhhcccccccCCCCCCCCCCCcEEEEECCEeEe---hhHHHHhhccHHHHHhhcCCCCCC
Q 007949 132 LRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIE---AHRVILSARSVFFRRKFETDWRYR 207 (583)
Q Consensus 132 ~t~L~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~---~Hk~iL~a~S~~f~~~~~~~~~e~ 207 (583)
.++-..+|+-.+.++.+.+..-|++|... ..+.+.+| -|...+...|+-|+-|...+|.+.
T Consensus 80 ~~e~lfyCE~Cd~~ip~~~~snH~tSttH---------------llsl~~~pa~k~~p~~i~pks~GyrLl~~~GW~pe 143 (223)
T KOG2384|consen 80 RDEALFYCEVCDIYIPNSKKSNHFTSTTH---------------LLSLQHIPANKFQPHLIKPKSLGYRLLSQYGWSPE 143 (223)
T ss_pred CCCccchhhhhhhhccCCCCccchhhHHH---------------HhhhccCCCCCCCCCcCCCCCchHHHHHhcCCCcc
Confidence 45556678877777666555445544321 11122333 445568889999999999988753
No 117
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.32 E-value=1.8e-06 Score=81.31 Aligned_cols=102 Identities=25% Similarity=0.183 Sum_probs=88.8
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC-CCCch-HHHHHh--hHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT-FDGDR-CHYAAL--NLKVR 112 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~t-~~~aa~--~~~i~ 112 (583)
|..+...|+.+-...|++.--++|..|..|.|+|..|+..|+.++++.|++.|+|+|... ..+.| +|.||. +.++-
T Consensus 16 Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvc 95 (396)
T KOG1710|consen 16 LLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVC 95 (396)
T ss_pred HHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHH
Confidence 789999999999999998755699999999999999999999999999999999999653 44557 577777 89999
Q ss_pred HHHHhCCCCCCCCCCcccCCccchhccc
Q 007949 113 KLLKAYEARPPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 113 ~~L~~~~~~~~~~~~~~~~~t~L~~A~~ 140 (583)
.+|+..|+.... .+.-|.|+-.+|.-
T Consensus 96 rllldaGa~~~~--vNsvgrTAaqmAAF 121 (396)
T KOG1710|consen 96 RLLLDAGARMYL--VNSVGRTAAQMAAF 121 (396)
T ss_pred HHHHhccCcccc--ccchhhhHHHHHHH
Confidence 999999999887 67788998777763
No 118
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.26 E-value=3.2e-06 Score=90.68 Aligned_cols=87 Identities=16% Similarity=0.059 Sum_probs=79.3
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCC--cCccCCCCchHHHHHh---
Q 007949 33 PNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDRCHYAAL--- 107 (583)
Q Consensus 33 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~~~aa~--- 107 (583)
|+.+|-.||..|+.+++++|+++|+|++++|.+|+|.||..+..-..++-.+++++|++ ....|..|-||...|.
T Consensus 240 GEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 240 GEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred ccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhh
Confidence 45558999999999999999999999999999999999999999889999999999999 8899999999766666
Q ss_pred hHHHHHHHHhCC
Q 007949 108 NLKVRKLLKAYE 119 (583)
Q Consensus 108 ~~~i~~~L~~~~ 119 (583)
+.+|.+.+++..
T Consensus 320 k~emf~~ile~~ 331 (782)
T KOG3676|consen 320 KKEMFQHILERR 331 (782)
T ss_pred hHHHHHHHHHhh
Confidence 889998888873
No 119
>PF13606 Ank_3: Ankyrin repeat
Probab=98.16 E-value=2.5e-06 Score=53.16 Aligned_cols=30 Identities=33% Similarity=0.721 Sum_probs=27.4
Q ss_pred CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 007949 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA 61 (583)
Q Consensus 24 ~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~ 61 (583)
+|+|| ||+||..|+.+++++|+++|+++|.
T Consensus 1 ~G~T~--------Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTP--------LHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCH--------HHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 47888 8999999999999999999999874
No 120
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.10 E-value=3.3e-06 Score=84.64 Aligned_cols=89 Identities=25% Similarity=0.265 Sum_probs=80.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhc-CCCcCccCCCCchHHHHHh---hHHH
Q 007949 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDGDRCHYAAL---NLKV 111 (583)
Q Consensus 36 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~~~aa~---~~~i 111 (583)
.+++|+..|++..++.+.-.|.+++.+|-+.+|+||.|+..|+.+++++|++. +.+++.+|+.|+||+.-|. |.++
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v 588 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV 588 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence 38999999999999999999999999999999999999999999999999976 8999999999999877777 8999
Q ss_pred HHHHHhCCCCCCC
Q 007949 112 RKLLKAYEARPPP 124 (583)
Q Consensus 112 ~~~L~~~~~~~~~ 124 (583)
+++|.+.......
T Consensus 589 ~k~L~~~~~~y~~ 601 (622)
T KOG0506|consen 589 VKLLEEAQYPYTL 601 (622)
T ss_pred HHHHHHHhccccc
Confidence 9999987665444
No 121
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.10 E-value=8.2e-06 Score=83.72 Aligned_cols=90 Identities=19% Similarity=0.201 Sum_probs=77.5
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHcCCC--C--CccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHh-
Q 007949 33 PNGDVFEASRAGDVDRLRYILESGVN--V--NARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL- 107 (583)
Q Consensus 33 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~- 107 (583)
...+|.-|....++..+-+||.+|.. + .+-+.+|+|+||+||..|+..+.++|+.+|+|+.++|.+|+|++..|+
T Consensus 624 lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~ 703 (749)
T KOG0705|consen 624 LGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQ 703 (749)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhh
Confidence 45678899999999999999998854 2 335668899999999999999999999999999999999999655555
Q ss_pred --hHHHHHHHHhCCCCC
Q 007949 108 --NLKVRKLLKAYEARP 122 (583)
Q Consensus 108 --~~~i~~~L~~~~~~~ 122 (583)
..+++.+|+.+|+..
T Consensus 704 a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 704 AGSQECIDVLLQYGCPD 720 (749)
T ss_pred cccHHHHHHHHHcCCCc
Confidence 788999999999853
No 122
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.02 E-value=6.7e-06 Score=52.66 Aligned_cols=33 Identities=30% Similarity=0.616 Sum_probs=29.9
Q ss_pred CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Q 007949 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ 64 (583)
Q Consensus 24 ~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~ 64 (583)
+|.|| ||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 dG~Tp--------Lh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTP--------LHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBH--------HHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccH--------HHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 37777 8999999999999999999999998873
No 123
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.99 E-value=9.7e-06 Score=82.78 Aligned_cols=106 Identities=19% Similarity=0.137 Sum_probs=60.2
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCC--cCccCCCCch-HHHHHh--hHH
Q 007949 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDR-CHYAAL--NLK 110 (583)
Q Consensus 36 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t-~~~aa~--~~~ 110 (583)
.+..|+..+++--+...-.+|.+.-.++.+..|.||+|+..|+.++++|++++|.. .+..+..|.| +|.+|. +..
T Consensus 869 eil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 869 EILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 35556666665554444445555555555666666666666666666666666543 3444555665 455555 555
Q ss_pred HHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 111 VRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 111 i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+.++|+..|+.... ++..|+||-.-|-+.+.
T Consensus 949 vc~~lvdagasl~k--td~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 949 VCQLLVDAGASLRK--TDSKGKTPQERAQQAGD 979 (1004)
T ss_pred HHHHHHhcchhhee--cccCCCChHHHHHhcCC
Confidence 55666666665555 45566666555444443
No 124
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.91 E-value=1.7e-05 Score=81.40 Aligned_cols=68 Identities=28% Similarity=0.356 Sum_probs=62.2
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
-.+.+.+|.|+ ||+||+.|++...++|+-+|+++-..|..|+|+|.||-..|..+|+..|+.+|+...
T Consensus 654 ~t~~~~~grt~--------LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 654 ETCGEGDGRTA--------LHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred ccccCCCCcch--------hhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 33456778899 799999999999999999999999999999999999999999999999999998754
No 125
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.86 E-value=1.4e-05 Score=87.65 Aligned_cols=115 Identities=22% Similarity=0.212 Sum_probs=69.0
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC--CCChhHHHHHHHhCCHHHHHHHHhcCCCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--QWDSVALYYACLAGHLDAARMLLESGAIC 92 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 92 (583)
|++-..++-...|| |.+|...|..+++..|+..|+.+|.+. +.|.+||++|+.+||...++.|++.|.++
T Consensus 847 gankehrnvsDytP--------lsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdi 918 (2131)
T KOG4369|consen 847 GANKEHRNVSDYTP--------LSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDI 918 (2131)
T ss_pred hccccccchhhcCc--------hhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchh
Confidence 55555555556666 566666666667776666666666544 45666777777777777777777666666
Q ss_pred CccCCCCc-hHHHHHh---hHHHHHHHHhCCCCCCCCCCcccCCccchhcc
Q 007949 93 SEHTFDGD-RCHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (583)
Q Consensus 93 ~~~~~~g~-t~~~aa~---~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~ 139 (583)
|..-..++ |.+..+. +.+++.+|+...+++.. +.+.|.|||.-+.
T Consensus 919 NaqIeTNrnTaltla~fqgr~evv~lLLa~~anveh--Raktgltplme~A 967 (2131)
T KOG4369|consen 919 NAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEH--RAKTGLTPLMEMA 967 (2131)
T ss_pred ccccccccccceeeccccCcchHHHHHHHHhhhhhh--hcccCCcccchhh
Confidence 65443332 3332222 66666666666666555 5566666665444
No 126
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.77 E-value=6.1e-05 Score=67.03 Aligned_cols=70 Identities=21% Similarity=0.196 Sum_probs=64.5
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 92 (583)
+.+||++|..|||| ++.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-..|+.++++.|.+.-.+-
T Consensus 2 e~~in~rD~fgWTa--------lmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTA--------LMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchH--------HHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 46899999999999 79999999999999999999 889999999999999999999999999998774443
No 127
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.69 E-value=2e-05 Score=79.15 Aligned_cols=70 Identities=23% Similarity=0.463 Sum_probs=64.4
Q ss_pred cccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCC
Q 007949 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA 90 (583)
Q Consensus 13 ~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga 90 (583)
+.|.|++.+|.+.+|+ ||.||..|+++++++|+. .+.+++.+|.||+|||--|...+|.+++++|-+.-.
T Consensus 527 l~g~D~~~~DyD~RTa--------LHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 527 LQGMDLETKDYDDRTA--------LHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred Hhcccccccccccchh--------heeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 3489999999999999 799999999999999998 689999999999999999999999999999976543
No 128
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.61 E-value=0.00014 Score=74.69 Aligned_cols=83 Identities=29% Similarity=0.296 Sum_probs=67.3
Q ss_pred HHHHHHHcCCHHHHHHHHH--cCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHH
Q 007949 36 DVFEASRAGDVDRLRYILE--SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLK 110 (583)
Q Consensus 36 ~L~~A~~~g~~~~v~~Ll~--~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~ 110 (583)
++|+++.....+-+...+. .+..++..|..|+||||+|+..||...++.|+..||++.++|.+|++ +|.++. +.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 3799998888776665444 34568889999999999999999999999999999999999999998 688877 555
Q ss_pred HH-HHHHhC
Q 007949 111 VR-KLLKAY 118 (583)
Q Consensus 111 i~-~~L~~~ 118 (583)
++ .+|..+
T Consensus 103 ~i~~vlr~~ 111 (560)
T KOG0522|consen 103 IITEVLRHL 111 (560)
T ss_pred HHHHHHHHh
Confidence 44 444443
No 129
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.60 E-value=0.00013 Score=74.85 Aligned_cols=66 Identities=23% Similarity=0.310 Sum_probs=60.7
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 88 (583)
...++.+|..|.|| ||+|+..|+...++.|+..|+++..+|..||+|||-|+..|+..++..++.+
T Consensus 45 ~~~id~~D~~g~Tp--------LhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTP--------LHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hceeccccCCCCcc--------HHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 45688899999999 7999999999999999999999999999999999999999999888777754
No 130
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.56 E-value=0.00017 Score=73.96 Aligned_cols=86 Identities=19% Similarity=0.263 Sum_probs=76.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHh---
Q 007949 33 PNGDVFEASRAGDVDRLRYILESGVN--VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL--- 107 (583)
Q Consensus 33 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~--- 107 (583)
.-+.||||+..|+-++|++++++|+. .++.|..|.|+||-|+..++..+..+|++.|+.....|..|.||..-|.
T Consensus 899 ~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~ 978 (1004)
T KOG0782|consen 899 HCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAG 978 (1004)
T ss_pred hhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcC
Confidence 34669999999999999999999976 6778899999999999999999999999999999999999999876665
Q ss_pred hHHHHHHHHhC
Q 007949 108 NLKVRKLLKAY 118 (583)
Q Consensus 108 ~~~i~~~L~~~ 118 (583)
..++..+|.+.
T Consensus 979 d~dlaayle~r 989 (1004)
T KOG0782|consen 979 DPDLAAYLESR 989 (1004)
T ss_pred CchHHHHHhhh
Confidence 78888887653
No 131
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.55 E-value=0.00016 Score=73.23 Aligned_cols=66 Identities=21% Similarity=0.253 Sum_probs=59.1
Q ss_pred ccCCCCCC-CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh
Q 007949 14 DEIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 14 ~~~din~~-d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
-|+++|.. .+.|.|| ||.|++.|+..-+++|.-+|++++++|..|.||+-+|-..||.++++.|++
T Consensus 155 lGA~~N~~hpekg~Tp--------LHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 155 LGAQANFFHPEKGNTP--------LHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred cccccCCCCcccCCch--------hHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 38888877 4567888 799999999999999999999999999999999999999999988877654
No 132
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.35 E-value=0.00016 Score=80.59 Aligned_cols=81 Identities=30% Similarity=0.336 Sum_probs=71.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHh---hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL---NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~---~~~i~~ 113 (583)
||.|+..|..-+++.|+++|+++|..|..|+||+|.+...|+...+..|+.+|++.++.+.+|..++..+. +.+++-
T Consensus 660 lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~ 739 (785)
T KOG0521|consen 660 LHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVL 739 (785)
T ss_pred hhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999998655543 555554
Q ss_pred HHHh
Q 007949 114 LLKA 117 (583)
Q Consensus 114 ~L~~ 117 (583)
++..
T Consensus 740 l~~l 743 (785)
T KOG0521|consen 740 LLRL 743 (785)
T ss_pred HHhh
Confidence 4443
No 133
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=97.21 E-value=0.0018 Score=60.83 Aligned_cols=97 Identities=23% Similarity=0.339 Sum_probs=77.0
Q ss_pred EEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCC--HHh
Q 007949 345 VCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDID--PDQ 422 (583)
Q Consensus 345 v~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~--~~~ 422 (583)
|.+-++|..|...+.-|.....+|++|+.. ++.-. ......|-|. =||.-|..+|.|+..|.+ .++ ...
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~--~i~~~-----~d~s~~IFID-RSpKHF~~ILNfmRdGdv-~LPe~~ke 77 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLET--DIPVE-----KDESGCIFID-RSPKHFDTILNFMRDGDV-DLPESEKE 77 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhc--CCccc-----cCCcCcEEec-CChhHHHHHHHhhhcccc-cCccchHH
Confidence 557789999999999999999999999997 33211 0112334444 478999999999998887 454 467
Q ss_pred HHHHHHHHhccCchHHHHHHHHHHHhhc
Q 007949 423 AEEMFDAASRYLLFPLKRAVADVLLLHL 450 (583)
Q Consensus 423 ~~~ll~~A~~~~~~~l~~~c~~~l~~~l 450 (583)
+.+|+..|.+|.+++|.+.|...+....
T Consensus 78 l~El~~EA~fYlL~~Lv~~C~~~i~~~~ 105 (230)
T KOG2716|consen 78 LKELLREAEFYLLDGLVELCQSAIARLI 105 (230)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhhcc
Confidence 8899999999999999999999877654
No 134
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=97.18 E-value=0.00024 Score=66.67 Aligned_cols=100 Identities=15% Similarity=0.200 Sum_probs=70.1
Q ss_pred HHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhh
Q 007949 331 EAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYM 410 (583)
Q Consensus 331 ~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~i 410 (583)
.++...+......|+.+......|++||++|++||++|+.+.++. .--|. -..-.+..-+++-++|+.+|.|+
T Consensus 119 kD~ad~ye~k~c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd-~e~~a------e~i~dik~ag~dm~~feafLh~l 191 (401)
T KOG2838|consen 119 KDFADGYERKVCGDLDIIFKETCFPAHRAFLAARCPFFKILANSD-EEPEA------EDICDIKFAGFDMDAFEAFLHSL 191 (401)
T ss_pred HHHhhhhheeeeccceeeeeeccchHHHHHHHhhCcchhhhccCC-CCcch------hhhhhhhhhccChHHHHHHHHHH
Confidence 333334444555699999999999999999999999999998862 11110 12223566688999999999999
Q ss_pred cCCCCC--CCCHHhHHHHHHHHhccCchH
Q 007949 411 YTDGLK--DIDPDQAEEMFDAASRYLLFP 437 (583)
Q Consensus 411 Yt~~~~--~i~~~~~~~ll~~A~~~~~~~ 437 (583)
|+|+.. ++.-.++.-|.++..-|+.+.
T Consensus 192 ~tgEfgmEd~~fqn~diL~QL~edFG~~k 220 (401)
T KOG2838|consen 192 ITGEFGMEDLGFQNSDILEQLCEDFGCFK 220 (401)
T ss_pred HhcccchhhcCCchHHHHHHHHHhhCCch
Confidence 999872 222245666667777777644
No 135
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.89 E-value=0.0018 Score=65.21 Aligned_cols=133 Identities=20% Similarity=0.147 Sum_probs=106.6
Q ss_pred CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHHhHH---HHH
Q 007949 351 KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQAE---EMF 427 (583)
Q Consensus 351 ~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~~~~---~ll 427 (583)
+..+.+|+.+++++++.|+.|+... .+.++ ...+.+.+.++..++.+..|.|+..- ........ .++
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~d-~~~~~--------~~~~~~~d~~~~~~~~~~~F~~~~s~-~~~~~~~~~~~~~~ 178 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKSD-VFKES--------SKLITLLEEKPEVLEALNGFQVLPSQ-VSSVERIFEKHPDL 178 (297)
T ss_pred CcEEEcCceEEEeeecceeeecccc-cchhc--------cccccccccchhhHhhhceEEEeccc-hHHHHHhhcCChhh
Confidence 5669999999999999999999872 22222 22347778899999999999999765 23333343 888
Q ss_pred HHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHh--hHHHhhCchhHHH
Q 007949 428 DAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIAC--NFETFADSREFRA 496 (583)
Q Consensus 428 ~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~--nf~~v~~~~~f~~ 496 (583)
..|..++...++..|...+.+.+ ...++...+..+..++...+...|..++.. ++..+....++..
T Consensus 179 a~~f~~~~~~lk~~~~~~l~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ld~l~~~~~~~~ 246 (297)
T KOG1987|consen 179 AAAFKYKNRHLKLACMPVLLSLI---ETLNVSQSLQEASNYDLKEAKSALTYVIAAGFKLDWLEKKLNEVK 246 (297)
T ss_pred hhccccccHHHHHHHHHHHHHHH---HhhhhcccHHHhchhHHHHHHHHHHHHHhccchHhHHHHHHHHHH
Confidence 89999999999999999999988 577778888999999999999999999998 7777766555543
No 136
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=96.73 E-value=0.011 Score=46.62 Aligned_cols=82 Identities=28% Similarity=0.290 Sum_probs=61.1
Q ss_pred EEEEEC-CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhh-----cCCC---C
Q 007949 345 VCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYM-----YTDG---L 415 (583)
Q Consensus 345 v~~~~~-~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~i-----Yt~~---~ 415 (583)
|.++.. |..|-.-|. .|.-|.-+|+|+++.+.+.|. ...++.+.+++..+++.+-+|+ |++. +
T Consensus 19 VkLvS~Ddhefiikre-~AmtSgTiraml~gpg~~se~-------~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~ei 90 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKRE-HAMTSGTIRAMLSGPGVFSEA-------EKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTEI 90 (112)
T ss_pred eEeecCCCcEEEEeeh-hhhhhhHHHHHHcCCcccccc-------ccceEEeccchHHHHHHHHHHhhheeeeccccccC
Confidence 455543 445554444 467899999999985555555 3468999999999999999886 5654 1
Q ss_pred C--CCCHHhHHHHHHHHhccC
Q 007949 416 K--DIDPDQAEEMFDAASRYL 434 (583)
Q Consensus 416 ~--~i~~~~~~~ll~~A~~~~ 434 (583)
+ +|+++.+++||.+|+++.
T Consensus 91 PeF~IppemaleLL~aAn~Le 111 (112)
T KOG3473|consen 91 PEFDIPPEMALELLMAANYLE 111 (112)
T ss_pred CCCCCCHHHHHHHHHHhhhhc
Confidence 1 577899999999999874
No 137
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.72 E-value=0.00082 Score=74.67 Aligned_cols=121 Identities=16% Similarity=0.115 Sum_probs=56.5
Q ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCccCCCChhHHHHHHHhCCHHHHHHHH-hcCCCcCccCCCCch-HHHHHh--hHHH
Q 007949 37 VFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLL-ESGAICSEHTFDGDR-CHYAAL--NLKV 111 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t-~~~aa~--~~~i 111 (583)
+|+++..+..-.++.+++- |......|..|.-.+|+ |..++.+.+-+|+ ..|..++.+|..|+| +|+|+. +..+
T Consensus 578 lhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l 656 (975)
T KOG0520|consen 578 LHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKL 656 (975)
T ss_pred HHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHH
Confidence 4555555555555555542 43334444444444444 3344444443333 334555555555555 344444 4445
Q ss_pred HHHHHhCCCCCCCC----CCcccCCccchhcccccc----ccchhhhhhhccccc
Q 007949 112 RKLLKAYEARPPPL----GPLQAALRDTFLGCGANR----QFLEEAEVVLGISGV 158 (583)
Q Consensus 112 ~~~L~~~~~~~~~~----~~~~~~~t~L~~A~~~~~----~~l~~~~~~~~~~~l 158 (583)
+..|+..|++.... .....|.|+-.+|-.+++ .++.+.....+.+.+
T Consensus 657 ~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~ 711 (975)
T KOG0520|consen 657 VASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNL 711 (975)
T ss_pred HHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhc
Confidence 55555444332221 122346666666655555 344444444444433
No 138
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.37 E-value=0.0062 Score=66.51 Aligned_cols=106 Identities=23% Similarity=0.229 Sum_probs=82.9
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHHc--C--CCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHh
Q 007949 32 VPNGDVFEASRAGDVDRLRYILES--G--VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL 107 (583)
Q Consensus 32 ~~~~~L~~A~~~g~~~~v~~Ll~~--g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~ 107 (583)
.+...+..||+.|+...|+..++. . .++|+.|--|+++|+.|..+.|.++.++|++++... |..+++|..
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------gdALL~aI~ 97 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------GDALLLAIA 97 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc------chHHHHHHH
Confidence 355668899999999999999983 2 578999999999999999999999999999876654 666555554
Q ss_pred --hHHHHHHHHhCCCCCCC--------CCCcccCCccchhcccccc
Q 007949 108 --NLKVRKLLKAYEARPPP--------LGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 108 --~~~i~~~L~~~~~~~~~--------~~~~~~~~t~L~~A~~~~~ 143 (583)
..++|++++.+...... ......+.||+.+||-.|+
T Consensus 98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn 143 (822)
T KOG3609|consen 98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNN 143 (822)
T ss_pred HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcc
Confidence 77888888876654311 0134568899999997766
No 139
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=96.28 E-value=0.0029 Score=62.10 Aligned_cols=116 Identities=17% Similarity=0.222 Sum_probs=84.6
Q ss_pred CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC-CCCHHHHHHHhhhhcCCCCCCCCHHhHHHHHHH
Q 007949 351 KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFEKMIEYMYTDGLKDIDPDQAEEMFDA 429 (583)
Q Consensus 351 ~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~v~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~ 429 (583)
.+.|.|.+..|...-.||+..+.. ...+++ ..+.|+|. +.+-.+|+=+++|+..... .+++.|+..++..
T Consensus 13 ~rdF~C~~~lL~~~M~YF~~~l~~--~~~~~~------~~~~idisVhCDv~iF~WLm~yv~~~~p-~l~~~NvvsIliS 83 (317)
T PF11822_consen 13 KRDFTCPRDLLVSEMRYFAEYLSR--YINDSQ------RWEEIDISVHCDVHIFEWLMRYVKGEPP-SLTPSNVVSILIS 83 (317)
T ss_pred ceeeeccHHHHHHhhHHHHHHHhh--cccccC------cCCCcceEEecChhHHHHHHHHhhcCCC-cCCcCcEEEeEeh
Confidence 367999999999999999999964 111111 22345544 4678999999999999666 8999999999999
Q ss_pred HhccCchHHHHHHHHHHHhhcccC-----Ch--hhHHHHHHHHHhcCcHHHHH
Q 007949 430 ASRYLLFPLKRAVADVLLLHLEMV-----SP--AELCHWLILSDMYGVFKVRE 475 (583)
Q Consensus 430 A~~~~~~~l~~~c~~~l~~~l~~~-----~~--~n~~~~l~~A~~~~~~~L~~ 475 (583)
|++++|++|++.|..|+.+++..+ +. -|---+.++|..+...+|..
T Consensus 84 S~FL~M~~Lve~cl~y~~~~~~~Iv~~~~nl~Cl~~~Ll~RLa~~~t~~el~~ 136 (317)
T PF11822_consen 84 SEFLQMESLVEECLQYCHDHMSEIVASPCNLNCLNDNLLTRLADMFTHEELEA 136 (317)
T ss_pred hhhhccHHHHHHHHHHHHHhHHHHHcCCCCcccCCHHHHHHHHHhcCcccHhH
Confidence 999999999999999998877210 00 11112456666666666555
No 140
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.025 Score=53.35 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=70.0
Q ss_pred cEEEEECCEeEehhHHHHhhccHHHHHhhcCCCC--CCcccEEEcCCCCHHHHHHHhhhhcCCcccCChh--hHHHHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETDWR--YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD--DMEDLVKI 247 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~--e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~--~~~~ll~~ 247 (583)
=|.+.|||..|..++.-|.--..+|+.|+..++. ......|-+ +=+|.-|..+|+||-.|.+.++.. .+.+|+.-
T Consensus 6 ~vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~~i~~~~d~s~~IFI-DRSpKHF~~ILNfmRdGdv~LPe~~kel~El~~E 84 (230)
T KOG2716|consen 6 TVKLNVGGTIFKTSKSTLTKFDGFFKTMLETDIPVEKDESGCIFI-DRSPKHFDTILNFMRDGDVDLPESEKELKELLRE 84 (230)
T ss_pred eEEEecCCeEEEeehhhhhhhhhHHHHHhhcCCccccCCcCcEEe-cCChhHHHHHHHhhhcccccCccchHHHHHHHHH
Confidence 3567899999999999999999999999998764 222334544 578999999999999888776544 56688888
Q ss_pred HhHhchHHHHHHHHH
Q 007949 248 CKVCKCESLQRIIEK 262 (583)
Q Consensus 248 a~~~~~~~l~~~l~~ 262 (583)
|+.|.++.|.+.|+.
T Consensus 85 A~fYlL~~Lv~~C~~ 99 (230)
T KOG2716|consen 85 AEFYLLDGLVELCQS 99 (230)
T ss_pred HHHhhHHHHHHHHHH
Confidence 887777777666653
No 141
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.18 E-value=0.0095 Score=60.96 Aligned_cols=72 Identities=24% Similarity=0.208 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCCCCc------cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCchHHHHHhhHHHHHHHHh
Q 007949 46 VDRLRYILESGVNVNA------RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKA 117 (583)
Q Consensus 46 ~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~~~aa~~~~i~~~L~~ 117 (583)
...+++|.++++..|. .+....|+||+|+..|...++.++|+.|+|+..+|..|.||...+.+.++...++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~a 481 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFIA 481 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHHH
Confidence 5677888888766543 34457899999999999999999999999999999999998877778888777763
No 142
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=96.11 E-value=0.00084 Score=55.66 Aligned_cols=97 Identities=25% Similarity=0.268 Sum_probs=70.1
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCC
Q 007949 263 ELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDL 342 (583)
Q Consensus 263 ~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~ 342 (583)
|+.++.+|..+++.+|...|.+|+..||. ++ ...++|..+|.+.+..++++ +
T Consensus 1 C~~i~~~A~~~~~~~L~~~~~~~i~~nf~---------------~v----~~~~~f~~L~~~~l~~iL~~-------~-- 52 (103)
T PF07707_consen 1 CLSIYRLAEKYGLEELAEACLRFIAKNFN---------------EV----SKSDEFLELPFDQLIEILSS-------D-- 52 (103)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHTHH---------------HH----TTSHHHHCS-HHHHHHHHHT-------S--
T ss_pred ChhHHHHHHHcChHHHHHHHHHHHHHHHH---------------HH----ccchhhhcCCHHHHHHHHhc-------c--
Confidence 68899999999999999999999999974 11 13557889999999999987 5
Q ss_pred CcEEEEECCEEEEeeeeeeec----cCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHH
Q 007949 343 ADVCVRVDKKIFRCHQVVLAS----RSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKM 406 (583)
Q Consensus 343 ~Dv~~~~~~~~~~ahr~iL~~----~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~ 406 (583)
++.+..|+..|.+-..|+.. |.+++..++.. |+++.+++..+..+
T Consensus 53 -~l~v~~E~~v~~av~~W~~~~~~~r~~~~~~Ll~~------------------iR~~~l~~~~L~~~ 101 (103)
T PF07707_consen 53 -DLNVSSEDDVFEAVLRWLKHNPENREEHLKELLSC------------------IRFPLLSPEELQNV 101 (103)
T ss_dssp -S--ECTCCCHHHHHHHHHHCTHHHHTTTHHHHHCC------------------CHHHCT-HHHHHHC
T ss_pred -ccccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHh------------------CCcccCCHHHHHHH
Confidence 66666677777777777643 45566767653 67777777776554
No 143
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=96.08 E-value=0.0034 Score=51.14 Aligned_cols=90 Identities=24% Similarity=0.197 Sum_probs=63.3
Q ss_pred EEEEECCEEEEeeeeeee-ccCHHHHHHHcCc-cccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcC-CCCCCCCHH
Q 007949 345 VCVRVDKKIFRCHQVVLA-SRSEYFKARLSRM-KDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDPD 421 (583)
Q Consensus 345 v~~~~~~~~~~ahr~iL~-~~S~~F~~~~~~~-~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt-~~~~~i~~~ 421 (583)
|.+-|+|+.|.+-+..|. ....+|..|+... ..+... ....+-+ +=+|..|+.+|+|+.+ +.++.....
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~-------~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~ 72 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDD-------DDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEI 72 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEET-------TTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCC-------ccceEEe-ccChhhhhHHHHHHhhcCccCCCCch
Confidence 578899999999999987 4567999999861 011111 2234544 4589999999999999 666333356
Q ss_pred hHHHHHHHHhccCchHH-HHHH
Q 007949 422 QAEEMFDAASRYLLFPL-KRAV 442 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l-~~~c 442 (583)
....++..|.+|+++.+ .+.|
T Consensus 73 ~~~~l~~Ea~fy~l~~l~i~~c 94 (94)
T PF02214_consen 73 CLEELLEEAEFYGLDELFIEDC 94 (94)
T ss_dssp -HHHHHHHHHHHT-HHHHBHHC
T ss_pred hHHHHHHHHHHcCCCccccCCC
Confidence 78899999999999998 6655
No 144
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=95.97 E-value=0.014 Score=47.54 Aligned_cols=83 Identities=16% Similarity=0.191 Sum_probs=58.4
Q ss_pred EEEEECCEeEehhHHHHh-hccHHHHHhhcCC---CCCCcccEEEcCCCCHHHHHHHhhhhcC-CcccCC-hhhHHHHHH
Q 007949 173 VVFYVQGRPIEAHRVILS-ARSVFFRRKFETD---WRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIA-VDDMEDLVK 246 (583)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~-a~S~~f~~~~~~~---~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~-~~~~~~ll~ 246 (583)
|.+.|||+.|.+-+..|. ....+|..|+.+. ........+-+ +=+|..|+.+|+|+-+ +.+..+ ......++.
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~ 79 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEICLEELLE 79 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS-HHHHHH
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEe-ccChhhhhHHHHHHhhcCccCCCCchhHHHHHH
Confidence 678999999999999998 5556899999864 22334455555 5799999999999999 666554 345667777
Q ss_pred HHhHhchHHH
Q 007949 247 ICKVCKCESL 256 (583)
Q Consensus 247 ~a~~~~~~~l 256 (583)
-|+.++++.+
T Consensus 80 Ea~fy~l~~l 89 (94)
T PF02214_consen 80 EAEFYGLDEL 89 (94)
T ss_dssp HHHHHT-HHH
T ss_pred HHHHcCCCcc
Confidence 7777766554
No 145
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.92 E-value=0.013 Score=34.93 Aligned_cols=28 Identities=29% Similarity=0.451 Sum_probs=21.7
Q ss_pred ChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 66 DSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 66 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
|.||+|+|+..++.++++.|++.|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6778888888888888888887776653
No 146
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.56 E-value=0.011 Score=66.40 Aligned_cols=78 Identities=21% Similarity=0.103 Sum_probs=69.1
Q ss_pred CCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccc
Q 007949 64 QWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 64 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~ 140 (583)
..|.|+||.|+..|...+.+.|++.|+++|..|..|++ +|.+.. +...+..|+++|++... .+..|++|++.|.+
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a--~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA--FDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc--cCccCcchhhHHhh
Confidence 36799999999999999999999999999999999998 566666 88888999999999888 68999999999986
Q ss_pred ccc
Q 007949 141 ANR 143 (583)
Q Consensus 141 ~~~ 143 (583)
..+
T Consensus 732 ~~~ 734 (785)
T KOG0521|consen 732 AAN 734 (785)
T ss_pred hcc
Confidence 544
No 147
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=95.48 E-value=0.049 Score=45.21 Aligned_cols=62 Identities=19% Similarity=0.159 Sum_probs=46.0
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCC
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGL 415 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~ 415 (583)
+++.. +|..|.+.+... ..|..++.|+...+...+ ....|.+++++..+++.+++|++...-
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~~--------~~~~Ipl~~v~~~~L~~Vi~yc~~h~~ 66 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLGVDDE--------NNNPIPLPNVTSKILSKVIEYCEHHVD 66 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccCcccC--------CCCCccCCCcCHHHHHHHHHHHHHccc
Confidence 44444 678899988875 789999999986311111 114799999999999999999986643
No 148
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.47 E-value=0.032 Score=61.19 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=70.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
..++|+.|.-|+++ |+.|..+.|.+++++|++++..+ . .+|.+|...|...+++.++.+-.....
T Consensus 52 ~lninc~d~lGr~a--------l~iai~nenle~~eLLl~~~~~~--g-----dALL~aI~~~~v~~VE~ll~~~~~~~~ 116 (822)
T KOG3609|consen 52 KLNINCRDPLGRLA--------LHIAIDNENLELQELLLDTSSEE--G-----DALLLAIAVGSVPLVELLLVHFVDAPY 116 (822)
T ss_pred ccchhccChHhhhc--------eecccccccHHHHHHHhcCcccc--c-----hHHHHHHHHHHHHHHHHHHhcccccch
Confidence 57899999999999 68899999999999998887654 2 278888888888888888876433211
Q ss_pred ----------cCCCCchHHH-HHh--hHHHHHHHHhCCCCCCC
Q 007949 95 ----------HTFDGDRCHY-AAL--NLKVRKLLKAYEARPPP 124 (583)
Q Consensus 95 ----------~~~~g~t~~~-aa~--~~~i~~~L~~~~~~~~~ 124 (583)
.-..+.||.. ||. +.+|+++|+..|+.+..
T Consensus 117 ~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 117 LERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred hccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 1123346544 444 78888888888887655
No 149
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=95.17 E-value=0.099 Score=46.71 Aligned_cols=102 Identities=19% Similarity=0.202 Sum_probs=73.4
Q ss_pred CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCC------------
Q 007949 350 DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKD------------ 417 (583)
Q Consensus 350 ~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~------------ 417 (583)
+|+.|.+-..+. ..|..+.+++... |..... ..|.++.|...+|..+++|++...-+.
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~--------~~~~~~-~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~ 82 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIED--------GCADEN-DPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEE 82 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHc--------CCCccC-CccccCccCHHHHHHHHHHHHHccccccccccccccccc
Confidence 677787777764 7788888888752 111101 368999999999999999999865310
Q ss_pred --C----------CHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHH
Q 007949 418 --I----------DPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHW 461 (583)
Q Consensus 418 --i----------~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~ 461 (583)
+ ....+.+++.+|++|.+++|...|++.+...+...|++.....
T Consensus 83 ~~i~~WD~~Flk~d~~tLfdli~AAnyLdi~gLl~~~ck~va~mikgktpeEir~~ 138 (162)
T KOG1724|consen 83 TDIPEWDAEFLKVDQGTLFDLILAANYLDIKGLLDLTCKTVANMIKGKTPEEIREI 138 (162)
T ss_pred CCccHHHHHHHhcCHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 1 1246788888888888888888888888888765566655444
No 150
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=94.84 E-value=0.035 Score=62.21 Aligned_cols=37 Identities=30% Similarity=0.403 Sum_probs=20.2
Q ss_pred cCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCC
Q 007949 55 SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (583)
Q Consensus 55 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 91 (583)
.|..++.+|..||||||||+..|+..++..|++.|++
T Consensus 630 ~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~ 666 (975)
T KOG0520|consen 630 DGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGAD 666 (975)
T ss_pred cccccccccCCCCcccchHhhcCHHHHHHHHHHhccc
Confidence 4555555555555555555555555555555544443
No 151
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=94.81 E-value=0.097 Score=48.17 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=71.8
Q ss_pred cEEEEECCEEEEeeeeeeecc--CHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH
Q 007949 344 DVCVRVDKKIFRCHQVVLASR--SEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~--S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~ 421 (583)
-|.+-++|+.|..-+--|..| -.-+.+||.+. +|.-. ++....+- -+=+|.-|+.++.|+..|.++..+..
T Consensus 10 ~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~-g~~~~-----~d~kGa~l-IDRsp~yFepIlNyLr~Gq~~~~s~i 82 (302)
T KOG1665|consen 10 MVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGR-GAMCQ-----EDKKGAVL-IDRSPKYFEPILNYLRDGQIPSLSDI 82 (302)
T ss_pred hheeecCCeEEEEeehhhcccCchHHHHHHHccC-CCccc-----cccCceEE-EccCchhhHHHHHHHhcCceeecCCc
Confidence 577888999988777666554 45788999874 33211 11222233 34578899999999999999878888
Q ss_pred hHHHHHHHHhccCchHHHHHHHH
Q 007949 422 QAEEMFDAASRYLLFPLKRAVAD 444 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~~~c~~ 444 (583)
++..++..|++|++-.|++..++
T Consensus 83 ~~lgvLeeArff~i~sL~~hle~ 105 (302)
T KOG1665|consen 83 DCLGVLEEARFFQILSLKDHLED 105 (302)
T ss_pred cHHHHHHHhhHHhhHhHHhHHhh
Confidence 99999999999999999998887
No 152
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=94.76 E-value=0.14 Score=37.98 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=43.5
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcC
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYS 231 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYt 231 (583)
|+++. +|+.|.+.+.++ ..|..++.|+.+...+.. .|++++|+..+++.+++|++.
T Consensus 3 v~L~SsDg~~f~V~~~~a-~~S~~i~~ml~~~~~~~~--~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAA-KQSKTIKNMLEDLGDEDE--PIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp EEEEETTSEEEEEEHHHH-TTSHHHHHHHHCTCCCGT--EEEETTS-HHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHH-HHhHHHHHHHhhhccccc--ccccCccCHHHHHHHHHHHHh
Confidence 45554 778999988876 589999999975333323 799999999999999999973
No 153
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=94.56 E-value=0.25 Score=41.27 Aligned_cols=97 Identities=22% Similarity=0.229 Sum_probs=70.3
Q ss_pred ECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCH--------
Q 007949 349 VDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDP-------- 420 (583)
Q Consensus 349 ~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~-------- 420 (583)
.+|..|.+...+ |.||-..+.|+... .+. .. .+..+.|...+|..+++|+-.+.- ..+.
T Consensus 9 ~dge~F~vd~~i-AerSiLikN~l~d~---~~~-------n~-p~p~pnVrSsvl~kv~ew~ehh~~-s~sede~d~~~r 75 (158)
T COG5201 9 IDGEIFRVDENI-AERSILIKNMLCDS---TAC-------NY-PIPAPNVRSSVLMKVQEWMEHHTS-SLSEDENDLEIR 75 (158)
T ss_pred cCCcEEEehHHH-HHHHHHHHHHhccc---ccc-------CC-CCcccchhHHHHHHHHHHHHhccc-cCCCccChHhhh
Confidence 467778877766 68898899988741 111 22 367788999999999999876543 1111
Q ss_pred -----------------HhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhH
Q 007949 421 -----------------DQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAEL 458 (583)
Q Consensus 421 -----------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~ 458 (583)
+.+.++..+|+++.++.|.+.|+..+.+.+..-+++..
T Consensus 76 ks~p~D~wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivaemirgkSpeei 130 (158)
T COG5201 76 KSKPSDFWDRFFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAEMIRGKSPEEI 130 (158)
T ss_pred ccCCccHHHHHHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHHHHccCCHHHH
Confidence 34677888899999999999999888888765555543
No 154
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.29 E-value=0.072 Score=31.36 Aligned_cols=24 Identities=21% Similarity=0.607 Sum_probs=21.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCC
Q 007949 37 VFEASRAGDVDRLRYILESGVNVN 60 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~ 60 (583)
+|+|+..|+.++++.|+..|.+++
T Consensus 6 l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 6 LHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC
Confidence 899999999999999999987664
No 155
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=94.14 E-value=0.15 Score=51.68 Aligned_cols=87 Identities=28% Similarity=0.310 Sum_probs=65.2
Q ss_pred EEEEECCEEEEeeeeeeec--cCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHHh
Q 007949 345 VCVRVDKKIFRCHQVVLAS--RSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (583)
Q Consensus 345 v~~~~~~~~~~ahr~iL~~--~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~~ 422 (583)
|.+-|+|+.|.--+.-|+. +-.+|.+++++ .|...+. ....|-| +=+|+.|..+|.|+.|+++ +++.-.
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~--~~~s~~~-----~~~~iFI-DRDPdlFaviLn~LRTg~L-~~~g~~ 83 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSG--RINSLKD-----ESGAIFI-DRDPDLFAVILNLLRTGDL-DASGVF 83 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcC--ccccccC-----CCCceEe-cCCchHHHHHHHHHhcCCC-CCccCc
Confidence 6688999999988887654 45899999987 6654432 1122322 3479999999999999999 566655
Q ss_pred HHHHHH-HHhccCchHHHH
Q 007949 423 AEEMFD-AASRYLLFPLKR 440 (583)
Q Consensus 423 ~~~ll~-~A~~~~~~~l~~ 440 (583)
...++. .|.+|++.++.+
T Consensus 84 ~~~llhdEA~fYGl~~llr 102 (465)
T KOG2714|consen 84 PERLLHDEAMFYGLTPLLR 102 (465)
T ss_pred hhhhhhhhhhhcCcHHHHH
Confidence 555555 999999998876
No 156
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.11 E-value=0.066 Score=55.08 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=37.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHH
Q 007949 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYAC 74 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 74 (583)
|.||||+..|.-.+|.++|..|+|+..+|..|+||..++.
T Consensus 432 T~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 432 TFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 5599999999999999999999999999999999999876
No 157
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=93.57 E-value=0.32 Score=38.57 Aligned_cols=73 Identities=10% Similarity=0.078 Sum_probs=56.3
Q ss_pred CCEeEehhHHHHhhccHHHHHhhcCCC--CCCcccEEEcCCCCHHHHHHHhhhh-----cCCc------ccCChhhHHHH
Q 007949 178 QGRPIEAHRVILSARSVFFRRKFETDW--RYRNEIRFSREKLSYPALYGLIHFF-----YSDR------LEIAVDDMEDL 244 (583)
Q Consensus 178 ~~~~~~~Hk~iL~a~S~~f~~~~~~~~--~e~~~~~i~l~~v~~~~~~~lL~yl-----Ytg~------~~i~~~~~~~l 244 (583)
+|..|-.-|. +|.-|+-+|+||.+.. .+.....+.+.+++...++.+.+|+ |++. ++|+++-..++
T Consensus 25 Ddhefiikre-~AmtSgTiraml~gpg~~se~~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~eiPeF~IppemaleL 103 (112)
T KOG3473|consen 25 DDHEFIIKRE-HAMTSGTIRAMLSGPGVFSEAEKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTEIPEFDIPPEMALEL 103 (112)
T ss_pred CCcEEEEeeh-hhhhhhHHHHHHcCCccccccccceEEeccchHHHHHHHHHHhhheeeeccccccCCCCCCCHHHHHHH
Confidence 4455555554 4567889999999764 4556678999999999999999998 5543 57899999999
Q ss_pred HHHHhHh
Q 007949 245 VKICKVC 251 (583)
Q Consensus 245 l~~a~~~ 251 (583)
|.+|..+
T Consensus 104 L~aAn~L 110 (112)
T KOG3473|consen 104 LMAANYL 110 (112)
T ss_pred HHHhhhh
Confidence 9998755
No 158
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=93.34 E-value=0.37 Score=39.89 Aligned_cols=59 Identities=14% Similarity=0.116 Sum_probs=46.0
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCC-CcccEEEcCCCCHHHHHHHhhhhcCC
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRY-RNEIRFSREKLSYPALYGLIHFFYSD 232 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e-~~~~~i~l~~v~~~~~~~lL~ylYtg 232 (583)
|+++. +|..|.+.+.+. ..|..++.|+.+...+ .....|++++|+..+++.+++|++..
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~h 64 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLGVDDENNNPIPLPNVTSKILSKVIEYCEHH 64 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccCcccCCCCCccCCCcCHHHHHHHHHHHHHc
Confidence 55554 778999999876 6899999999753222 22257999999999999999999864
No 159
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=92.90 E-value=0.31 Score=37.97 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=41.6
Q ss_pred CCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcH
Q 007949 418 IDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVF 471 (583)
Q Consensus 418 i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~ 471 (583)
++.+.+.+|+.+|+++++++|...|+..+...+...|++.+-.++.+...+...
T Consensus 11 ~~~~~L~~l~~AA~yL~I~~L~~~~~~~iA~~i~gks~eeir~~fgi~~d~t~e 64 (78)
T PF01466_consen 11 VDNDELFDLLNAANYLDIKGLLDLCCKYIANMIKGKSPEEIRKYFGIENDLTPE 64 (78)
T ss_dssp S-HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHTTS-HHHHHHHHT---TSSHH
T ss_pred cCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhcCCCHHHHHHHcCCCCCCCHH
Confidence 466789999999999999999999999999999777888888888777665543
No 160
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=92.76 E-value=0.44 Score=48.51 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=63.9
Q ss_pred EEEEECCEeEehhHHHHhhcc--HHHHHhhcCCCCCCccc--EEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHH-H
Q 007949 173 VVFYVQGRPIEAHRVILSARS--VFFRRKFETDWRYRNEI--RFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK-I 247 (583)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~a~S--~~f~~~~~~~~~e~~~~--~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~-~ 247 (583)
|.|.|||+.|.-.+.-|+-.. ++|.+++.+.|...... .|-+ +=+|+.|..+|+|+-||++++..-....++- -
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~~~~s~~~~~~~iFI-DRDPdlFaviLn~LRTg~L~~~g~~~~~llhdE 91 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSGRINSLKDESGAIFI-DRDPDLFAVILNLLRTGDLDASGVFPERLLHDE 91 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcCccccccCCCCceEe-cCCchHHHHHHHHHhcCCCCCccCchhhhhhhh
Confidence 458899999988887776555 68999998777543222 2433 5789999999999999999986555555554 6
Q ss_pred HhHhchHHHHHHH
Q 007949 248 CKVCKCESLQRII 260 (583)
Q Consensus 248 a~~~~~~~l~~~l 260 (583)
|..|++..+.+.+
T Consensus 92 A~fYGl~~llrrl 104 (465)
T KOG2714|consen 92 AMFYGLTPLLRRL 104 (465)
T ss_pred hhhcCcHHHHHHh
Confidence 7778776665533
No 161
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=91.65 E-value=0.65 Score=34.30 Aligned_cols=56 Identities=20% Similarity=0.194 Sum_probs=42.1
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcC
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT 412 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt 412 (583)
+.+.. +|+.|.+-+.+. ..|..++.|+...+ . ....|.+++++..+++.+++|++.
T Consensus 3 v~L~SsDg~~f~V~~~~a-~~S~~i~~ml~~~~---~--------~~~~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAA-KQSKTIKNMLEDLG---D--------EDEPIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp EEEEETTSEEEEEEHHHH-TTSHHHHHHHHCTC---C--------CGTEEEETTS-HHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHH-HHhHHHHHHHhhhc---c--------cccccccCccCHHHHHHHHHHHHh
Confidence 34444 678898888875 79999999998621 0 111699999999999999999874
No 162
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=90.89 E-value=0.04 Score=45.08 Aligned_cols=71 Identities=20% Similarity=0.302 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCC
Q 007949 263 ELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDL 342 (583)
Q Consensus 263 ~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~ 342 (583)
|+.++.+|..+++..|.+.|..|+..||. .. ...++|..+|.+.+..++.+ +
T Consensus 1 c~~i~~~a~~~~~~~L~~~~~~~i~~nf~---------------~~----~~~~~f~~L~~~~l~~iL~~-------d-- 52 (101)
T smart00875 1 CLGIRRFAELYGLEELLEKALRFILKNFL---------------EV----AQSEEFLELSLEQLLSLLSS-------D-- 52 (101)
T ss_pred CHhHHHHHHHhChHHHHHHHHHHHHHHHH---------------HH----hcCcHHhcCCHHHHHHHhCc-------c--
Confidence 45677889999999999999999998864 11 12478999999999999877 5
Q ss_pred CcEEEEECCEEEEeeeeeee
Q 007949 343 ADVCVRVDKKIFRCHQVVLA 362 (583)
Q Consensus 343 ~Dv~~~~~~~~~~ahr~iL~ 362 (583)
++.+..+...|.+-..|+.
T Consensus 53 -~l~v~~E~~v~~av~~W~~ 71 (101)
T smart00875 53 -DLNVPSEEEVFEAVLRWVK 71 (101)
T ss_pred -cCCCCCHHHHHHHHHHHHH
Confidence 4443335555666555554
No 163
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=88.24 E-value=0.26 Score=49.49 Aligned_cols=112 Identities=17% Similarity=0.053 Sum_probs=71.7
Q ss_pred CEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHH---HHHHHHhHhchHH
Q 007949 179 GRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME---DLVKICKVCKCES 255 (583)
Q Consensus 179 ~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~---~ll~~a~~~~~~~ 255 (583)
+..+.+|+++++++++.|+.|+..+..+.....+.+.+..+..++.+..|.|+..-........ .++..+..++.+.
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~F~~~~s~~~~~~~~~~~~~~~a~~f~~~~~~ 188 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKSDVFKESSKLITLLEEKPEVLEALNGFQVLPSQVSSVERIFEKHPDLAAAFKYKNRH 188 (297)
T ss_pred CcEEEcCceEEEeeecceeeecccccchhccccccccccchhhHhhhceEEEeccchHHHHHhhcCChhhhhccccccHH
Confidence 5669999999999999999999887655544455777889999999999999965322222222 4455555555556
Q ss_pred HHHHHHHHH----------HHHHHHHHcCChhHHHHHHHHHHhcC
Q 007949 256 LQRIIEKEL----------IHQKYAEYKALRDVDNSQKRFILQGS 290 (583)
Q Consensus 256 l~~~l~~~l----------~~~~~a~~~~~~~l~~~~~~~i~~~~ 290 (583)
++..+.+.+ .....+...+...+...+..++...+
T Consensus 189 lk~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 233 (297)
T KOG1987|consen 189 LKLACMPVLLSLIETLNVSQSLQEASNYDLKEAKSALTYVIAAGF 233 (297)
T ss_pred HHHHHHHHHHHHHHhhhhcccHHHhchhHHHHHHHHHHHHHhccc
Confidence 655554211 12223343444445555656655533
No 164
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription]
Probab=87.68 E-value=0.24 Score=49.47 Aligned_cols=144 Identities=15% Similarity=0.166 Sum_probs=109.6
Q ss_pred cEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCH--H
Q 007949 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDP--D 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~--~ 421 (583)
+.++......+.+|+.+|...|+.|..+... . ... +....+.+.+++...+..+.+++|.. + .--. .
T Consensus 28 ~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~~--~---~~~----~~~~~~~~~~~~c~~~~~~~~~l~~~-~-ek~e~~~ 96 (319)
T KOG1778|consen 28 VEIVTDVKDLIPAHSLVLGPASPVFKKVLKQ--P---CRK----SLVKGNKILGVPCKAVNVFIRFLYSS-L-EKHEMVF 96 (319)
T ss_pred hhhhhhhhhhhHHHHhcccccchHHHHHHhh--h---cch----hhhhcceeecccccccchhhhhhccc-h-hhhHHHH
Confidence 4455556778999999999999999887765 2 100 12234666777888888999999988 4 2222 3
Q ss_pred hHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCchhHHHHHhc
Q 007949 422 QAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLT 500 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~l~~~ 500 (583)
....++.....+.++..+..|...+..-+ ++..+++.++..+..|....|...+...+...|.....++.|..+...
T Consensus 97 ~~ihll~~~~~~~v~~~~~d~~~~~~~~~--~~~r~~flvl~~~~~~~~~~lr~a~hss~~~~~~~H~~t~~~~~~~c~ 173 (319)
T KOG1778|consen 97 FDIHLLALSHVYVVPQPKADCDPILECGL--FDKRNVFLVLQLAEHCDFSDLRRAKHSSIMLLFDLHLQTEKWFAYTCP 173 (319)
T ss_pred HHHHHHhhhhhhhccCccccCCccccchh--hhhHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhcccCceeeecC
Confidence 45556666678889999988888776633 367889999999999999999999999999999999998877666544
No 165
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=85.74 E-value=1.2 Score=44.22 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=65.1
Q ss_pred EeEehhHHHHhhccHHHHHhhcC---CCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHHHHhHhchHHH
Q 007949 180 RPIEAHRVILSARSVFFRRKFET---DWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVCKCESL 256 (583)
Q Consensus 180 ~~~~~Hk~iL~a~S~~f~~~~~~---~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~a~~~~~~~l 256 (583)
+.|.|.+.+|...=.||+..+.. +-.+.....|.+ ..+-.+|+=+++|+......+++.|+..++.-|..++++.|
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~~~~~~~~~~~idisV-hCDv~iF~WLm~yv~~~~p~l~~~NvvsIliSS~FL~M~~L 92 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSRYINDSQRWEEIDISV-HCDVHIFEWLMRYVKGEPPSLTPSNVVSILISSEFLQMESL 92 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhhcccccCcCCCcceEE-ecChhHHHHHHHHhhcCCCcCCcCcEEEeEehhhhhccHHH
Confidence 67999999999999999999964 344445566665 57889999999999998888999999888888888877766
Q ss_pred HHH
Q 007949 257 QRI 259 (583)
Q Consensus 257 ~~~ 259 (583)
.+.
T Consensus 93 ve~ 95 (317)
T PF11822_consen 93 VEE 95 (317)
T ss_pred HHH
Confidence 654
No 166
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=85.57 E-value=2.8 Score=38.89 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=66.1
Q ss_pred CcEEEEECCEeEehhHHHHhhccH--HHHHhhcCC-C--CCCcccEEEcCCCCHHHHHHHhhhhcCCcccC-ChhhHHHH
Q 007949 171 PDVVFYVQGRPIEAHRVILSARSV--FFRRKFETD-W--RYRNEIRFSREKLSYPALYGLIHFFYSDRLEI-AVDDMEDL 244 (583)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~S~--~f~~~~~~~-~--~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i-~~~~~~~l 244 (583)
+-|.+.++|+.|.--..-|..|-| -+..||.+. | .+..+..+-+ +=+|.-|+-+|.|+-.|.++. +.-++..+
T Consensus 9 ~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~lI-DRsp~yFepIlNyLr~Gq~~~~s~i~~lgv 87 (302)
T KOG1665|consen 9 SMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAVLI-DRSPKYFEPILNYLRDGQIPSLSDIDCLGV 87 (302)
T ss_pred hhheeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceEEE-ccCchhhHHHHHHHhcCceeecCCccHHHH
Confidence 478888999988766666666654 578899763 2 1223333333 578999999999999999855 44478899
Q ss_pred HHHHhHhchHHHHHHHH
Q 007949 245 VKICKVCKCESLQRIIE 261 (583)
Q Consensus 245 l~~a~~~~~~~l~~~l~ 261 (583)
++.|+.+++-.|+..++
T Consensus 88 LeeArff~i~sL~~hle 104 (302)
T KOG1665|consen 88 LEEARFFQILSLKDHLE 104 (302)
T ss_pred HHHhhHHhhHhHHhHHh
Confidence 99999998777777765
No 167
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=83.94 E-value=16 Score=32.39 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=71.2
Q ss_pred CcEEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH
Q 007949 343 ADVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD 421 (583)
Q Consensus 343 ~Dv~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~ 421 (583)
.-|.+-|+|..|---|.-|..-+ .|...+.+...+ ..+.+ .+ .--.+-+=+|.-|..+|.|+..|++ .++.-
T Consensus 21 ~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~-l~sdr--De---tGAYlIDRDP~~FgpvLNylRhgkl-vl~~l 93 (210)
T KOG2715|consen 21 LWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKD-LPSDR--DE---TGAYLIDRDPFYFGPVLNYLRHGKL-VLNKL 93 (210)
T ss_pred EEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccC-CCCCc--cc---cCceEeccCcchHHHHHHHHhcchh-hhhhh
Confidence 35777889999999999997766 555666654110 11100 01 1123334578899999999999999 67775
Q ss_pred hHHHHHHHHhccCchHHHHHHHHHHHhhc
Q 007949 422 QAEEMFDAASRYLLFPLKRAVADVLLLHL 450 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 450 (583)
.=..+|..|++|.++.|.+...+-+.+..
T Consensus 94 ~eeGvL~EAefyn~~~li~likd~i~dRd 122 (210)
T KOG2715|consen 94 SEEGVLEEAEFYNDPSLIQLIKDRIQDRD 122 (210)
T ss_pred hhhccchhhhccCChHHHHHHHHHHHHHh
Confidence 55679999999999999988888776654
No 168
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=73.67 E-value=27 Score=31.36 Aligned_cols=53 Identities=13% Similarity=0.111 Sum_probs=39.6
Q ss_pred CCEeEehhHHHHhhccHHHHHhhcCC-CCCCcccEEEcCCCCHHHHHHHhhhhcCC
Q 007949 178 QGRPIEAHRVILSARSVFFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYSD 232 (583)
Q Consensus 178 ~~~~~~~Hk~iL~a~S~~f~~~~~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYtg 232 (583)
+|+.|.+-..++ ..|..+..++... ..... ..|++++|+...|..++.|+|..
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~~~~~~~-~~IPl~nV~~~iL~kVIewC~~H 66 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIEDGCADEN-DPIPLPNVTSKILKKVIEWCKKH 66 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHcCCCccC-CccccCccCHHHHHHHHHHHHHc
Confidence 677777776664 5777778777642 22222 57999999999999999999973
No 169
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=73.33 E-value=7.5 Score=36.44 Aligned_cols=84 Identities=15% Similarity=0.194 Sum_probs=42.5
Q ss_pred HHHHHHcCCHHHHHHHHHc----CCCCCccCCCChhHHHHHHH--hCCHHHHHHHHhcC-CCcCc---cCCCCchHHHHH
Q 007949 37 VFEASRAGDVDRLRYILES----GVNVNARDQWDSVALYYACL--AGHLDAARMLLESG-AICSE---HTFDGDRCHYAA 106 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~A~~--~g~~~~v~~Ll~~g-a~~~~---~~~~g~t~~~aa 106 (583)
+-+|.-.+..+++.+|+++ ..++-.- ..+.--+-++.. ..+..++++.+++| +++|. +-..|.|-+.-|
T Consensus 183 m~~si~~~K~dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA 261 (284)
T PF06128_consen 183 MWLSIGNAKEDVALYLLSKFNFTKQDVASM-EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNA 261 (284)
T ss_pred HHHHhcccHHHHHHHHHhhcceecchhhhc-CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhH
Confidence 5556656666666666652 1121110 112223333332 23455666777666 55553 234566644444
Q ss_pred h---hHHHHHHHHhCCCC
Q 007949 107 L---NLKVRKLLKAYEAR 121 (583)
Q Consensus 107 ~---~~~i~~~L~~~~~~ 121 (583)
. +.+++.+|+++|+-
T Consensus 262 ~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 262 MKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhcCcHHHHHHHHHcCcc
Confidence 4 66677777777664
No 170
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=70.33 E-value=10 Score=33.65 Aligned_cols=92 Identities=12% Similarity=0.100 Sum_probs=67.5
Q ss_pred CcEEEEECCEeEehhHHHHhhcc-HHHHHhhcCCC------CCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHH
Q 007949 171 PDVVFYVQGRPIEAHRVILSARS-VFFRRKFETDW------RYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMED 243 (583)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~S-~~f~~~~~~~~------~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ 243 (583)
.-|.+.|||..|.--|.-|+.-+ .|+..+..... .+.+.--| +=+|.-|--+|+|+-.|++.++.-.-..
T Consensus 21 ~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~sdrDetGAYlI---DRDP~~FgpvLNylRhgklvl~~l~eeG 97 (210)
T KOG2715|consen 21 LWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLPSDRDETGAYLI---DRDPFYFGPVLNYLRHGKLVLNKLSEEG 97 (210)
T ss_pred EEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCCCCccccCceEe---ccCcchHHHHHHHHhcchhhhhhhhhhc
Confidence 36778899999988888888777 55555555432 12233222 5688999999999999999887755567
Q ss_pred HHHHHhHhchHHHHHHHHHHHH
Q 007949 244 LVKICKVCKCESLQRIIEKELI 265 (583)
Q Consensus 244 ll~~a~~~~~~~l~~~l~~~l~ 265 (583)
+|.-|..+....|.+.+..++.
T Consensus 98 vL~EAefyn~~~li~likd~i~ 119 (210)
T KOG2715|consen 98 VLEEAEFYNDPSLIQLIKDRIQ 119 (210)
T ss_pred cchhhhccCChHHHHHHHHHHH
Confidence 7888888888888888775543
No 171
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=69.52 E-value=12 Score=28.70 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=36.8
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhc
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 88 (583)
+..|..+|+.++++.+++.+ .++ ...+..|...-+.+++++|++.
T Consensus 10 l~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 68899999999999988755 221 4578999999999999999875
No 172
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=67.30 E-value=12 Score=34.03 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=32.7
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
|.+|+..|-.+.+...+++|-+++. ++|..|+.++|..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 6677777777777777777766542 67777888888777777653
No 173
>KOG3840 consensus Uncharaterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=46.81 E-value=58 Score=32.02 Aligned_cols=87 Identities=18% Similarity=0.273 Sum_probs=54.9
Q ss_pred cEEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeee-cCCCCHHHHHHHhhhhcCCCCCCCCHH
Q 007949 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIE-EHDLSKETFEKMIEYMYTDGLKDIDPD 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~-l~~v~~~~~~~~l~~iYt~~~~~i~~~ 421 (583)
-++..+.+..|-.-+.+|.+.- .-.-.||.+...|...+ ...+.+ -.+++..+|+.+|+|--+|.+...+.-
T Consensus 97 ~~t~lvd~~rf~v~q~llt~~p~Tmlg~mf~~g~~f~~pN------ErgEyeVAdGi~s~vFRAILdYYksG~iRCP~~v 170 (438)
T KOG3840|consen 97 KVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMGADLVSPN------ERDEFEVADGMTSSCFRAILDYYQSGTMRCPSSV 170 (438)
T ss_pred ceEEEeeeEEEEeeeeeecCCcchhhhhhhcccccccCCC------cCCceehhcchhHHHHHHHHHHHhcCceeCCCCC
Confidence 4677788888888888885543 33456666522333221 112333 356999999999999999987333334
Q ss_pred hHHHHHHHHhccCch
Q 007949 422 QAEEMFDAASRYLLF 436 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~ 436 (583)
.+-+|-.+.|++.++
T Consensus 171 SvpELrEACDYLlip 185 (438)
T KOG3840|consen 171 SVSELREACDYLLVP 185 (438)
T ss_pred chHHHHhhcceEEee
Confidence 555666666665553
No 174
>KOG2723 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=42.15 E-value=1.3e+02 Score=28.53 Aligned_cols=94 Identities=15% Similarity=0.092 Sum_probs=55.9
Q ss_pred CCcEE-EEECCEEEEeeeeee-eccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCC
Q 007949 342 LADVC-VRVDKKIFRCHQVVL-ASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDID 419 (583)
Q Consensus 342 ~~Dv~-~~~~~~~~~ahr~iL-~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~ 419 (583)
+.|++ +-++|..|..-..-| .-......+||++ +..-.+ +......|. =+...|+.++.|+-+... .++
T Consensus 7 ~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~---~~~~~~----d~~g~~fID-RDG~lFRyvL~~LRt~~l-~lp 77 (221)
T KOG2723|consen 7 YPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSG---ELPLLR----DSKGRYFID-RDGFLFRYVLDYLRTKAL-LLP 77 (221)
T ss_pred cCCceeeccCCeEEEeeccceeechHHHHHhhcCC---CCCccc----cccccEEEc-CCcchHHHHHHHhccccc-ccc
Confidence 34544 556666555444423 3345567777774 111100 011112222 234589999999999555 555
Q ss_pred H--HhHHHHHHHHhccCchHHHHHHHH
Q 007949 420 P--DQAEEMFDAASRYLLFPLKRAVAD 444 (583)
Q Consensus 420 ~--~~~~~ll~~A~~~~~~~l~~~c~~ 444 (583)
. .++..|...|++|+++.+...+.+
T Consensus 78 e~f~e~~~L~rEA~f~~l~~~~~~l~~ 104 (221)
T KOG2723|consen 78 EDFAEVERLVREAEFFQLEAPVTYLLN 104 (221)
T ss_pred hhhhhHHHHHHHHHHHccccHHHHHhc
Confidence 5 568899999999999977765544
No 175
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=40.91 E-value=1.3e+02 Score=28.44 Aligned_cols=26 Identities=23% Similarity=0.131 Sum_probs=12.4
Q ss_pred CChhHHHHHHHhCCHHHHHHHHhcCC
Q 007949 65 WDSVALYYACLAGHLDAARMLLESGA 90 (583)
Q Consensus 65 ~g~t~L~~A~~~g~~~~v~~Ll~~ga 90 (583)
.|.|-|--|..+++.+++..|+.+||
T Consensus 253 SGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 253 SGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 44444444444444444444444444
No 176
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=30.66 E-value=1e+02 Score=23.79 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=29.1
Q ss_pred ChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHH
Q 007949 454 SPAELCHWLILSDMYGVFKVREYCLEVIACNFET 487 (583)
Q Consensus 454 ~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~ 487 (583)
+.+..+.++..|...++..|.+.|..+|+..+..
T Consensus 12 ~~~~L~~l~~AA~yL~I~~L~~~~~~~iA~~i~g 45 (78)
T PF01466_consen 12 DNDELFDLLNAANYLDIKGLLDLCCKYIANMIKG 45 (78)
T ss_dssp -HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhcC
Confidence 6788999999999999999999999999977653
No 177
>KOG2723 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=27.73 E-value=1.3e+02 Score=28.58 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=55.1
Q ss_pred CCcEE-EEECCEeEehhHH-HHhhccHHHHHhhcCCCC--CCcccEEEcCCCCHHHHHHHhhhhcCCcccCCh--hhHHH
Q 007949 170 PPDVV-FYVQGRPIEAHRV-ILSARSVFFRRKFETDWR--YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAV--DDMED 243 (583)
Q Consensus 170 ~~Dv~-~~v~~~~~~~Hk~-iL~a~S~~f~~~~~~~~~--e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~--~~~~~ 243 (583)
+.|++ +.|||..+..-.. +.+-.-..+..||.+... ........+ +=+-..|+.||+|+-|....++. .++..
T Consensus 7 ~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~~~~~~~d~~g~~fI-DRDG~lFRyvL~~LRt~~l~lpe~f~e~~~ 85 (221)
T KOG2723|consen 7 YPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSGELPLLRDSKGRYFI-DRDGFLFRYVLDYLRTKALLLPEDFAEVER 85 (221)
T ss_pred cCCceeeccCCeEEEeeccceeechHHHHHhhcCCCCCccccccccEEE-cCCcchHHHHHHHhcccccccchhhhhHHH
Confidence 34665 4578876654333 444455567778875211 112222332 34456799999999996665665 46788
Q ss_pred HHHHHhHhchHHHHHHHH
Q 007949 244 LVKICKVCKCESLQRIIE 261 (583)
Q Consensus 244 ll~~a~~~~~~~l~~~l~ 261 (583)
+...|+.++++.+...+.
T Consensus 86 L~rEA~f~~l~~~~~~l~ 103 (221)
T KOG2723|consen 86 LVREAEFFQLEAPVTYLL 103 (221)
T ss_pred HHHHHHHHccccHHHHHh
Confidence 888888887665544443
No 178
>COG4029 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.23 E-value=16 Score=30.58 Aligned_cols=17 Identities=53% Similarity=0.610 Sum_probs=14.2
Q ss_pred HHHHHhhhccCCCCCCCC
Q 007949 561 MLMQVAKDEKSEPIPVDG 578 (583)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~ 578 (583)
-+|++|+++| ++||||.
T Consensus 115 k~eeva~e~k-~ki~vde 131 (142)
T COG4029 115 KPEEVALEEK-EKIPVDE 131 (142)
T ss_pred CccccCHHhc-cCCCHHH
Confidence 5788999988 9999983
No 179
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=23.66 E-value=4.7e+02 Score=22.40 Aligned_cols=114 Identities=9% Similarity=0.061 Sum_probs=64.0
Q ss_pred cEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhh-HHHHHHHH-
Q 007949 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDD-MEDLVKIC- 248 (583)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~-~~~ll~~a- 248 (583)
-|.+.. +|..|.+-+. +|-||-.++.|+... .+. ...|+.++|...+|..+++|+-...-..+++. -.++-+.+
T Consensus 3 ~i~l~s~dge~F~vd~~-iAerSiLikN~l~d~-~~~-n~p~p~pnVrSsvl~kv~ew~ehh~~s~sede~d~~~rks~p 79 (158)
T COG5201 3 MIELESIDGEIFRVDEN-IAERSILIKNMLCDS-TAC-NYPIPAPNVRSSVLMKVQEWMEHHTSSLSEDENDLEIRKSKP 79 (158)
T ss_pred ceEEEecCCcEEEehHH-HHHHHHHHHHHhccc-ccc-CCCCcccchhHHHHHHHHHHHHhccccCCCccChHhhhccCC
Confidence 455553 6677777665 467888889888542 122 23367789999999999999986654443332 11211111
Q ss_pred -hHhchHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHh
Q 007949 249 -KVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQ 288 (583)
Q Consensus 249 -~~~~~~~l~~~l~~~l~~~~~a~~~~~~~l~~~~~~~i~~ 288 (583)
+...-.|+.---+-.+.+...|.+...+.|.+.+-..+..
T Consensus 80 ~D~wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivae 120 (158)
T COG5201 80 SDFWDRFFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAE 120 (158)
T ss_pred ccHHHHHHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 0000011111111234455567777777877776666544
Done!