Query 007949
Match_columns 583
No_of_seqs 442 out of 5078
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:27:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 1.3E-31 4.5E-36 262.5 11.1 219 324-567 13-231 (256)
2 3i3n_A Kelch-like protein 11; 100.0 4.3E-31 1.5E-35 262.1 4.7 217 323-567 13-239 (279)
3 3htm_A Speckle-type POZ protei 99.9 2.5E-26 8.5E-31 211.0 13.5 159 319-493 14-172 (172)
4 3hqi_A Speckle-type POZ protei 99.9 7E-24 2.4E-28 213.8 14.1 159 319-493 154-312 (312)
5 4eoz_A Speckle-type POZ protei 99.9 1.9E-23 6.5E-28 185.9 5.7 131 332-475 15-145 (145)
6 3hve_A Gigaxonin; ubiquitin, c 99.9 8.3E-23 2.8E-27 199.9 7.5 185 154-373 21-221 (256)
7 3i3n_A Kelch-like protein 11; 99.9 5.5E-23 1.9E-27 203.7 2.4 224 155-435 23-269 (279)
8 4gpm_A Engineered protein OR26 99.8 4.8E-21 1.6E-25 174.8 12.9 127 7-143 18-148 (169)
9 2if5_A Zinc finger and BTB dom 99.8 1.1E-20 3.8E-25 162.0 10.4 111 326-446 9-119 (120)
10 3htm_A Speckle-type POZ protei 99.8 3.8E-20 1.3E-24 169.6 13.0 132 154-291 24-165 (172)
11 2vkp_A BTB/POZ domain-containi 99.8 2E-20 6.9E-25 157.6 9.8 104 336-450 2-109 (109)
12 1r29_A B-cell lymphoma 6 prote 99.8 2.6E-20 8.8E-25 161.4 10.7 115 324-449 11-126 (127)
13 2ppi_A Gigaxonin; BTB domain, 99.8 1.8E-20 6.1E-25 165.8 9.5 117 322-446 27-143 (144)
14 1buo_A POZ domain, protein (pr 99.8 2.2E-20 7.7E-25 160.3 9.6 111 325-450 11-121 (121)
15 2z8h_A Transcription regulator 99.8 1E-20 3.4E-25 166.4 7.2 119 324-457 18-137 (138)
16 3b84_A Zinc finger and BTB dom 99.8 2.2E-20 7.4E-25 159.8 7.1 110 326-449 8-117 (119)
17 2vpk_A Myoneurin; transcriptio 99.8 6.9E-20 2.4E-24 156.0 9.0 108 326-447 6-115 (116)
18 2q81_A MIZ-1 protein; BTB/POZ 99.8 3.8E-20 1.3E-24 158.3 7.4 109 324-447 9-117 (119)
19 2yy9_A Zinc finger and BTB dom 99.8 3.5E-20 1.2E-24 162.1 5.6 112 325-450 8-119 (135)
20 2if5_A Zinc finger and BTB dom 99.8 1.1E-18 3.7E-23 149.6 11.4 104 154-263 15-118 (120)
21 3c5r_A BARD-1, BRCA1-associate 99.8 1.2E-18 4.3E-23 152.8 12.0 118 15-143 1-121 (137)
22 1d9s_A Cyclin-dependent kinase 99.8 4.7E-19 1.6E-23 155.5 9.1 118 15-143 2-123 (136)
23 3ohu_A Transcription regulator 99.8 2.9E-20 1E-24 160.6 1.1 112 323-446 13-125 (125)
24 3hqi_A Speckle-type POZ protei 99.8 2.1E-18 7.3E-23 173.6 14.0 131 155-291 165-305 (312)
25 2vkp_A BTB/POZ domain-containi 99.8 2.1E-18 7.1E-23 145.1 11.6 96 167-263 5-104 (109)
26 2ihc_A Transcription regulator 99.8 3.2E-20 1.1E-24 159.9 0.4 110 326-447 13-123 (124)
27 4eoz_A Speckle-type POZ protei 99.8 4.5E-19 1.5E-23 157.5 7.3 120 154-279 15-144 (145)
28 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.5E-18 1.2E-22 155.8 12.8 126 8-143 29-158 (169)
29 1r29_A B-cell lymphoma 6 prote 99.8 3.8E-18 1.3E-22 147.7 12.0 103 154-263 19-122 (127)
30 4b93_B Ankyrin repeat domain-c 99.8 3.2E-18 1.1E-22 168.5 12.8 134 8-143 68-230 (269)
31 3ga1_A Nucleus accumbens-assoc 99.8 2.2E-19 7.4E-24 156.0 3.8 112 324-449 15-127 (129)
32 1awc_B Protein (GA binding pro 99.8 4.9E-18 1.7E-22 152.0 12.2 125 8-143 17-145 (153)
33 3v31_A Ankyrin repeat family A 99.8 5.2E-18 1.8E-22 154.2 12.4 127 7-143 17-147 (167)
34 4gpm_A Engineered protein OR26 99.7 4.8E-18 1.6E-22 154.9 11.6 110 7-124 51-164 (169)
35 2rfm_A Putative ankyrin repeat 99.7 7.3E-18 2.5E-22 157.0 13.0 126 8-143 50-179 (192)
36 3twr_A Tankyrase-2; ankyrin re 99.7 1.4E-17 4.8E-22 151.0 13.8 125 9-143 24-153 (165)
37 3fkc_A Transcriptional regulat 99.7 3.9E-18 1.3E-22 144.8 9.0 103 324-440 13-115 (116)
38 3f6q_A Integrin-linked protein 99.7 1.2E-17 4.1E-22 153.7 12.8 119 15-143 29-150 (179)
39 3v30_A DNA-binding protein rfx 99.7 9.8E-18 3.4E-22 153.1 11.7 126 8-143 17-147 (172)
40 2ppi_A Gigaxonin; BTB domain, 99.7 8.1E-18 2.8E-22 148.7 10.7 102 154-261 37-140 (144)
41 3b84_A Zinc finger and BTB dom 99.7 5.6E-18 1.9E-22 144.7 9.0 98 155-262 15-112 (119)
42 1ihb_A P18-INK4C(INK6), cyclin 99.7 8.6E-18 2.9E-22 151.8 10.8 126 7-143 19-149 (162)
43 4b93_B Ankyrin repeat domain-c 99.7 7.7E-18 2.6E-22 165.8 10.9 110 32-143 85-197 (269)
44 2vpk_A Myoneurin; transcriptio 99.7 1.8E-17 6.1E-22 141.0 10.6 99 155-263 13-113 (116)
45 1bd8_A P19INK4D CDK4/6 inhibit 99.7 2.1E-17 7.3E-22 148.2 11.5 117 15-143 26-145 (156)
46 1buo_A POZ domain, protein (pr 99.7 2.8E-17 9.5E-22 140.9 11.2 100 154-264 18-117 (121)
47 3m5b_A Zinc finger and BTB dom 99.7 3.2E-18 1.1E-22 145.7 5.1 93 337-448 25-117 (119)
48 3aaa_C Myotrophin, protein V-1 99.7 2.3E-17 8E-22 141.8 10.5 103 37-141 11-116 (123)
49 2yy9_A Zinc finger and BTB dom 99.7 1.5E-17 5.2E-22 145.3 9.1 98 154-261 15-112 (135)
50 2jab_A H10-2-G3; HER2, darpin, 99.7 4.7E-17 1.6E-21 142.6 11.4 107 35-143 16-125 (136)
51 2z8h_A Transcription regulator 99.7 2.6E-17 8.8E-22 144.6 9.6 100 154-261 26-126 (138)
52 2rfa_A Transient receptor pote 99.7 6.5E-17 2.2E-21 155.2 12.6 127 7-143 17-166 (232)
53 3t8k_A Uncharacterized protein 99.7 9.3E-18 3.2E-22 155.5 6.3 119 16-144 28-167 (186)
54 3ohu_A Transcription regulator 99.7 1.2E-17 4.1E-22 144.1 5.8 98 154-259 22-120 (125)
55 3fkc_A Transcriptional regulat 99.7 8.3E-17 2.8E-21 136.6 10.5 93 155-258 22-115 (116)
56 2xai_A ASB-9, ankyrin repeat a 99.7 1E-16 3.5E-21 157.0 12.6 117 15-143 59-178 (261)
57 1yyh_A HN1;, notch 1, ankyrin 99.7 7.3E-17 2.5E-21 157.3 11.4 105 37-143 128-235 (253)
58 1ikn_D Protein (I-kappa-B-alph 99.7 1.7E-16 5.9E-21 152.8 13.7 119 15-143 68-196 (236)
59 2rfm_A Putative ankyrin repeat 99.7 4.2E-17 1.5E-21 151.8 9.1 118 16-143 26-146 (192)
60 2q81_A MIZ-1 protein; BTB/POZ 99.7 3.3E-17 1.1E-21 139.9 7.4 98 155-263 18-115 (119)
61 3aji_A 26S proteasome non-ATPa 99.7 1.4E-16 4.7E-21 152.7 12.6 125 9-143 56-184 (231)
62 2ihc_A Transcription regulator 99.7 1.2E-17 4.2E-22 143.7 4.5 100 154-261 19-119 (124)
63 3hra_A Ankyrin repeat family p 99.7 2E-16 6.8E-21 148.1 12.7 126 8-143 20-152 (201)
64 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2E-16 7E-21 135.9 11.8 110 24-143 1-113 (126)
65 3aji_A 26S proteasome non-ATPa 99.7 1.4E-16 4.8E-21 152.7 11.9 126 8-143 88-217 (231)
66 2dzn_A Probable 26S proteasome 99.7 3E-16 1E-20 149.9 13.7 115 16-140 98-217 (228)
67 1bi7_B P16INK4A, MTS1, multipl 99.7 3.7E-17 1.3E-21 146.9 6.8 115 18-143 5-123 (156)
68 3b7b_A Euchromatic histone-lys 99.7 2.6E-16 8.9E-21 151.4 13.2 118 16-143 102-222 (237)
69 1s70_B 130 kDa myosin-binding 99.7 2.9E-16 9.8E-21 156.7 13.8 133 8-150 88-284 (299)
70 1s70_B 130 kDa myosin-binding 99.7 2.2E-16 7.5E-21 157.6 12.5 126 8-143 55-244 (299)
71 3hra_A Ankyrin repeat family p 99.7 2.3E-16 7.7E-21 147.7 11.6 126 8-143 54-190 (201)
72 1yyh_A HN1;, notch 1, ankyrin 99.7 1.8E-16 6.2E-21 154.4 11.1 119 15-143 80-202 (253)
73 1oy3_D Transcription factor in 99.7 2.7E-16 9.4E-21 155.2 12.5 119 15-143 148-270 (282)
74 2vge_A RELA-associated inhibit 99.7 2.3E-16 7.9E-21 151.3 11.6 122 15-143 8-135 (229)
75 1k1a_A B-cell lymphoma 3-encod 99.7 3.8E-16 1.3E-20 150.4 13.1 117 17-143 108-228 (241)
76 1n0q_A 3ANK, 3 ankyrin repeats 99.7 3.7E-16 1.3E-20 127.1 10.9 90 24-121 1-93 (93)
77 3m5b_A Zinc finger and BTB dom 99.7 9.7E-17 3.3E-21 136.6 7.7 87 168-263 28-114 (119)
78 2xai_A ASB-9, ankyrin repeat a 99.7 3.5E-16 1.2E-20 153.2 12.8 166 8-202 18-188 (261)
79 2rfa_A Transient receptor pote 99.7 2.9E-16 9.9E-21 150.6 12.0 117 19-143 69-209 (232)
80 2f8y_A Notch homolog 1, transl 99.7 4E-16 1.4E-20 148.6 12.9 105 37-143 96-203 (223)
81 3ga1_A Nucleus accumbens-assoc 99.7 4.5E-17 1.5E-21 141.3 5.5 97 155-261 24-121 (129)
82 2f8y_A Notch homolog 1, transl 99.7 4E-16 1.4E-20 148.6 12.7 119 15-143 48-170 (223)
83 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.6E-16 5.6E-21 153.5 9.9 126 7-143 19-151 (239)
84 1bi7_B P16INK4A, MTS1, multipl 99.7 1E-16 3.5E-21 144.0 7.9 120 7-137 26-150 (156)
85 2etb_A Transient receptor pote 99.7 1.1E-16 3.6E-21 156.3 8.5 113 21-143 86-233 (256)
86 1ikn_D Protein (I-kappa-B-alph 99.7 2E-16 6.7E-21 152.4 9.8 170 7-202 26-206 (236)
87 3v31_A Ankyrin repeat family A 99.7 5.2E-16 1.8E-20 140.9 11.9 110 24-143 2-114 (167)
88 1oy3_D Transcription factor in 99.7 2.6E-16 8.8E-21 155.4 10.7 126 8-143 60-237 (282)
89 1sw6_A Regulatory protein SWI6 99.6 4.8E-16 1.6E-20 157.6 12.5 101 10-118 114-227 (327)
90 3jxi_A Vanilloid receptor-rela 99.6 1.5E-16 5.1E-21 155.5 8.0 120 16-143 84-237 (260)
91 2etb_A Transient receptor pote 99.6 1.5E-16 5.3E-21 155.1 8.1 123 8-140 21-181 (256)
92 3ehr_A Osteoclast-stimulating 99.6 2.3E-16 8E-21 150.4 8.8 113 21-143 69-185 (222)
93 2vge_A RELA-associated inhibit 99.6 2E-16 7E-21 151.7 8.3 125 7-141 35-166 (229)
94 3deo_A Signal recognition part 99.6 1.1E-16 3.7E-21 148.0 6.0 111 22-143 41-155 (183)
95 2jab_A H10-2-G3; HER2, darpin, 99.6 8.9E-16 3E-20 134.4 11.6 105 7-119 28-136 (136)
96 3d9h_A CDNA FLJ77766, highly s 99.6 6.5E-16 2.2E-20 153.4 12.1 118 15-143 82-202 (285)
97 3b7b_A Euchromatic histone-lys 99.6 1.1E-15 3.9E-20 146.8 12.7 119 15-143 34-156 (237)
98 1d9s_A Cyclin-dependent kinase 99.6 3.8E-16 1.3E-20 136.8 8.5 105 8-121 27-136 (136)
99 4hbd_A KN motif and ankyrin re 99.6 3.7E-16 1.3E-20 154.4 9.3 116 18-143 104-262 (276)
100 3kea_A K1L; tropism, ANK repea 99.6 2.3E-16 7.9E-21 156.7 7.8 122 10-143 16-141 (285)
101 3kea_A K1L; tropism, ANK repea 99.6 2.4E-16 8.4E-21 156.5 7.7 167 7-203 45-218 (285)
102 3d9h_A CDNA FLJ77766, highly s 99.6 6.4E-16 2.2E-20 153.5 10.7 159 16-202 50-212 (285)
103 2dzn_A Probable 26S proteasome 99.6 9.2E-16 3.1E-20 146.5 11.4 113 21-143 68-186 (228)
104 2b0o_E UPLC1; arfgap, structur 99.6 3.9E-16 1.3E-20 156.1 8.8 118 10-143 168-298 (301)
105 2y1l_E Darpin-8.4; hydrolase-i 99.6 1.8E-15 6.2E-20 137.7 12.0 109 33-143 14-125 (169)
106 1n11_A Ankyrin; clathrin, BAND 99.6 7.2E-16 2.4E-20 162.7 10.7 161 15-202 4-168 (437)
107 1k1a_A B-cell lymphoma 3-encod 99.6 1.7E-15 5.7E-20 145.9 12.4 119 15-143 36-162 (241)
108 2pnn_A Transient receptor pote 99.6 8.5E-16 2.9E-20 151.4 9.8 115 21-143 97-245 (273)
109 1n11_A Ankyrin; clathrin, BAND 99.6 1.4E-15 4.7E-20 160.5 12.0 119 15-143 268-389 (437)
110 3ljn_A Hypothetical protein; a 99.6 5E-16 1.7E-20 159.8 8.2 117 17-143 130-256 (364)
111 4hbd_A KN motif and ankyrin re 99.6 4.6E-16 1.6E-20 153.8 7.6 146 37-201 80-237 (276)
112 3jxi_A Vanilloid receptor-rela 99.6 2E-16 6.8E-21 154.6 4.6 184 8-201 24-246 (260)
113 1wdy_A 2-5A-dependent ribonucl 99.6 2.8E-15 9.7E-20 147.8 12.8 129 7-143 19-160 (285)
114 2l6b_A NR1C; ankyrin, consensu 99.6 5.3E-16 1.8E-20 131.5 6.4 105 20-134 4-111 (115)
115 1awc_B Protein (GA binding pro 99.6 2.8E-15 9.7E-20 133.9 10.9 107 34-143 3-112 (153)
116 3v30_A DNA-binding protein rfx 99.6 1.5E-15 5E-20 138.6 9.1 118 7-134 50-171 (172)
117 2pnn_A Transient receptor pote 99.6 1E-15 3.4E-20 150.9 8.7 128 7-144 31-197 (273)
118 3ljn_A Hypothetical protein; a 99.6 1.9E-15 6.4E-20 155.5 11.0 168 8-201 35-265 (364)
119 3f6q_A Integrin-linked protein 99.6 4.2E-15 1.4E-19 136.6 12.0 111 23-143 3-117 (179)
120 3utm_A Tankyrase-1; tankyrase, 99.6 2.8E-15 9.7E-20 152.7 11.7 173 9-203 40-270 (351)
121 3aaa_C Myotrophin, protein V-1 99.6 3.9E-15 1.3E-19 127.8 10.5 101 7-115 21-122 (123)
122 3eu9_A Huntingtin-interacting 99.6 1.4E-14 4.6E-19 139.1 15.5 127 7-143 23-154 (240)
123 3ui2_A Signal recognition part 99.6 1.4E-15 4.9E-20 147.3 8.3 108 23-141 43-154 (244)
124 1n0r_A 4ANK, 4 ankyrin repeats 99.6 7.7E-15 2.6E-19 125.9 11.5 106 8-121 17-126 (126)
125 1ycs_B 53BP2, P53BP2; ankyrin 99.6 2.6E-15 9E-20 144.9 9.2 129 7-143 51-193 (239)
126 1ihb_A P18-INK4C(INK6), cyclin 99.6 6.9E-15 2.3E-19 132.5 11.3 106 8-121 52-162 (162)
127 3utm_A Tankyrase-1; tankyrase, 99.6 9.6E-15 3.3E-19 148.7 13.4 116 18-143 17-136 (351)
128 3twr_A Tankyrase-2; ankyrin re 99.6 5.4E-15 1.8E-19 133.8 9.9 106 7-120 56-164 (165)
129 2fo1_E LIN-12 protein; beta-ba 99.6 2.7E-15 9.4E-20 154.9 9.0 164 15-202 156-335 (373)
130 3lvq_E ARF-GAP with SH3 domain 99.6 5.8E-15 2E-19 158.4 10.5 117 8-140 147-276 (497)
131 1wdy_A 2-5A-dependent ribonucl 99.6 1.7E-14 5.8E-19 142.2 13.0 171 8-201 54-240 (285)
132 2fo1_E LIN-12 protein; beta-ba 99.6 5.9E-15 2E-19 152.4 9.3 118 16-143 226-358 (373)
133 1bd8_A P19INK4D CDK4/6 inhibit 99.5 2.6E-14 8.9E-19 127.9 11.4 103 7-118 49-155 (156)
134 4g8k_A 2-5A-dependent ribonucl 99.5 2.1E-14 7.2E-19 145.9 12.1 163 15-202 115-295 (337)
135 3eu9_A Huntingtin-interacting 99.5 1.7E-14 5.8E-19 138.5 10.7 105 37-143 80-189 (240)
136 1dcq_A PYK2-associated protein 99.5 1.9E-14 6.5E-19 142.1 11.3 96 18-121 162-263 (278)
137 3c5r_A BARD-1, BRCA1-associate 99.5 1.1E-14 3.9E-19 127.4 6.7 104 8-119 25-132 (137)
138 3jue_A Arfgap with coiled-coil 99.5 3.4E-14 1.2E-18 145.5 10.6 108 34-143 200-313 (368)
139 3ehr_A Osteoclast-stimulating 99.5 2.2E-14 7.6E-19 136.6 8.7 109 8-124 88-201 (222)
140 3deo_A Signal recognition part 99.5 7.9E-14 2.7E-18 128.6 11.7 112 7-143 58-171 (183)
141 3lvq_E ARF-GAP with SH3 domain 99.5 6E-14 2E-18 150.5 11.4 107 35-143 134-252 (497)
142 3jue_A Arfgap with coiled-coil 99.5 6.2E-14 2.1E-18 143.6 11.0 125 7-139 214-345 (368)
143 3t8k_A Uncharacterized protein 99.5 2E-14 6.7E-19 133.0 6.5 106 8-121 57-179 (186)
144 1dcq_A PYK2-associated protein 99.5 1.4E-13 4.7E-18 136.0 12.0 107 35-143 132-250 (278)
145 2zgd_A 3 repeat synthetic anky 99.5 7.4E-14 2.5E-18 117.3 8.6 90 18-115 17-109 (110)
146 3ui2_A Signal recognition part 99.5 1.5E-13 5.1E-18 133.0 11.8 112 7-143 59-172 (244)
147 2b0o_E UPLC1; arfgap, structur 99.5 1.2E-13 4E-18 138.1 10.9 108 34-143 152-271 (301)
148 4g8k_A 2-5A-dependent ribonucl 99.5 2.6E-13 8.9E-18 137.8 12.9 128 8-143 40-180 (337)
149 1n0q_A 3ANK, 3 ankyrin repeats 99.4 4.4E-13 1.5E-17 108.6 8.4 76 8-91 17-93 (93)
150 2l6b_A NR1C; ankyrin, consensu 99.4 3.6E-13 1.2E-17 113.8 5.4 88 7-102 23-111 (115)
151 1sw6_A Regulatory protein SWI6 99.3 6.6E-13 2.3E-17 134.4 4.2 128 11-140 37-210 (327)
152 2ast_A S-phase kinase-associat 99.3 6.3E-12 2.2E-16 112.3 9.6 119 345-473 3-149 (159)
153 2aja_A Ankyrin repeat family p 99.2 6E-13 2E-17 136.8 -2.5 106 37-143 96-211 (376)
154 2zgd_A 3 repeat synthetic anky 99.2 2.9E-11 1E-15 101.2 7.7 83 59-143 17-102 (110)
155 2aja_A Ankyrin repeat family p 99.2 8.6E-13 2.9E-17 135.6 -2.2 100 34-143 129-237 (376)
156 2eqx_A Kelch repeat and BTB do 99.1 1.9E-11 6.4E-16 101.1 2.3 91 453-560 8-98 (105)
157 4ajy_C Transcription elongatio 99.0 2.1E-09 7.3E-14 87.2 8.6 79 173-252 4-96 (97)
158 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 3.6E-09 1.2E-13 92.2 9.5 104 345-463 4-134 (141)
159 4ajy_C Transcription elongatio 98.9 2.6E-09 8.8E-14 86.7 7.9 82 345-434 4-96 (97)
160 2ast_A S-phase kinase-associat 98.9 6.3E-09 2.1E-13 92.8 10.3 88 173-261 3-119 (159)
161 2p1m_A SKP1-like protein 1A; F 98.8 1.6E-09 5.4E-14 96.6 2.0 112 345-469 6-144 (160)
162 3v7d_A Suppressor of kinetocho 98.2 6.6E-06 2.3E-10 73.6 11.1 118 344-467 8-150 (169)
163 1fs1_B SKP1, cyclin A/CDK2-ass 98.2 3.3E-06 1.1E-10 73.3 7.7 56 173-233 4-60 (141)
164 2fnj_C Transcription elongatio 98.0 5.7E-06 1.9E-10 66.5 5.4 82 345-435 3-96 (96)
165 1hv2_A Elongin C, ELC1; protei 98.0 1.9E-05 6.4E-10 63.8 7.5 80 344-435 5-99 (99)
166 2p1m_A SKP1-like protein 1A; F 97.9 2.6E-06 8.8E-11 75.7 1.7 114 172-290 5-125 (160)
167 1hv2_A Elongin C, ELC1; protei 97.8 4.7E-05 1.6E-09 61.4 7.9 78 172-251 5-97 (99)
168 2fnj_C Transcription elongatio 97.7 5.3E-05 1.8E-09 60.8 6.4 78 173-251 3-94 (96)
169 3drz_A BTB/POZ domain-containi 97.6 0.00022 7.7E-09 58.4 9.2 98 344-448 7-106 (107)
170 1vcb_B Protein (elongin C); tu 97.4 0.00018 6.3E-09 59.2 5.9 83 344-435 18-112 (112)
171 3drz_A BTB/POZ domain-containi 97.4 0.00079 2.7E-08 55.1 9.7 90 172-262 7-102 (107)
172 3v7d_A Suppressor of kinetocho 97.1 0.0025 8.4E-08 56.8 10.1 61 172-233 8-73 (169)
173 1vcb_B Protein (elongin C); tu 97.0 0.0013 4.5E-08 54.0 6.7 79 172-251 18-110 (112)
174 2eqx_A Kelch repeat and BTB do 96.5 0.00031 1.1E-08 57.4 -0.8 82 262-375 12-97 (105)
175 3drx_A BTB/POZ domain-containi 96.0 0.013 4.5E-07 53.0 7.0 99 344-449 13-113 (202)
176 3drx_A BTB/POZ domain-containi 94.8 0.044 1.5E-06 49.5 6.3 92 172-264 13-110 (202)
177 3kvt_A Potassium channel prote 90.4 0.22 7.4E-06 40.9 3.8 81 172-253 6-89 (115)
178 1s1g_A Potassium voltage-gated 89.1 0.25 8.5E-06 41.1 3.2 90 344-443 14-105 (124)
179 1s1g_A Potassium voltage-gated 87.1 0.58 2E-05 38.8 4.3 81 172-256 14-99 (124)
180 2nz0_B Potassium voltage-gated 85.9 0.82 2.8E-05 38.8 4.6 80 172-255 36-120 (140)
181 1t1d_A Protein (potassium chan 84.9 0.53 1.8E-05 37.4 2.8 85 345-439 3-90 (100)
182 3kvt_A Potassium channel prote 84.4 0.32 1.1E-05 39.8 1.4 86 344-439 6-93 (115)
183 1nn7_A Potassium channel KV4.2 84.3 0.76 2.6E-05 36.9 3.5 79 173-255 2-85 (105)
184 2nz0_B Potassium voltage-gated 84.2 0.47 1.6E-05 40.4 2.3 85 344-438 36-121 (140)
185 1t1d_A Protein (potassium chan 83.1 0.76 2.6E-05 36.5 3.0 81 173-254 3-87 (100)
186 1nn7_A Potassium channel KV4.2 68.5 0.93 3.2E-05 36.4 -0.3 89 345-443 2-92 (105)
187 2plx_B Peptide inhibitor; heli 35.2 37 0.0013 18.4 2.6 22 459-480 2-23 (26)
188 1gp8_A Protein (scaffolding pr 32.1 32 0.0011 21.5 2.3 20 35-54 15-34 (40)
189 2r9r_B Paddle chimera voltage 23.9 55 0.0019 34.1 4.1 82 172-254 53-138 (514)
190 2r9r_B Paddle chimera voltage 21.2 61 0.0021 33.8 3.7 86 344-439 53-141 (514)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=1.3e-31 Score=262.46 Aligned_cols=219 Identities=13% Similarity=0.160 Sum_probs=175.4
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~ 403 (583)
..-..+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ +|.++ ++....|.++++++++|
T Consensus 13 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~--~~~~~-----e~~~~~i~l~~v~~~~f 85 (256)
T 3hve_A 13 QHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNY--NPPKD-----DGSTYKIELEGISVMVM 85 (256)
T ss_dssp TTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------------CEEECSSCCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCC--CCCcc-----cCCCCeEEeCCCCHHHH
Confidence 344567888899999999999999999999999999999999999999997 55522 12446899999999999
Q ss_pred HHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHHHHHHh
Q 007949 404 EKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIAC 483 (583)
Q Consensus 404 ~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~ 483 (583)
+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+ +++||+.++.+|..|++..|.+.|.+||.+
T Consensus 86 ~~ll~~~Yt~~~-~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 161 (256)
T 3hve_A 86 REILDYIFSGQI-RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI---AAENCIGIRDFALHYCLHHVHYLATEYLET 161 (256)
T ss_dssp HHHHHHHHHSCC-CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC---CSSTTHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCC-cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC---CHhhHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 999999999999 7999999999999999999999999999999998 799999999999999999999999999999
Q ss_pred hHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhHHhHHHHHHHHH
Q 007949 484 NFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKRLEMLM 563 (583)
Q Consensus 484 nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (583)
||..+..+++|.+|+.+ .+..+ +.++++.+.+| .+++ +++++|+++++.. |..+...+++.+|+++
T Consensus 162 ~f~~v~~~~~f~~L~~~----~l~~l--L~~d~L~v~~E----~~v~-~av~~W~~~~~~~---R~~~~~~ll~~VRf~~ 227 (256)
T 3hve_A 162 HFRDVSSTEEFLELSPQ----KLKEV--ISLEKLNVGNE----RYVF-EAVIRWIAHDTEI---RKVHMKDVMSALWVSG 227 (256)
T ss_dssp HHHHHTTCHHHHSSCHH----HHHHH--HHCC-----------CTTH-HHHTTTCCC--CC---STTTHHHHHHHHHHHT
T ss_pred HHHHHhCCcchhcCCHH----HHHHH--HccCCCCCCCH----HHHH-HHHHHHHHcCHHH---HHHHHHHHHHhCCCCC
Confidence 99999999999987665 21121 25566666677 5777 9999999998754 5667888999999987
Q ss_pred HHhh
Q 007949 564 QVAK 567 (583)
Q Consensus 564 ~~~~ 567 (583)
.+.+
T Consensus 228 l~~~ 231 (256)
T 3hve_A 228 LDSS 231 (256)
T ss_dssp TCC-
T ss_pred CCHH
Confidence 7654
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=4.3e-31 Score=262.15 Aligned_cols=217 Identities=23% Similarity=0.281 Sum_probs=182.3
Q ss_pred hhhHHHHHHHhcccccCCCCCcEEEEEC---CEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC---
Q 007949 323 ICKLSSSVEAMHISDHVDDLADVCVRVD---KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--- 396 (583)
Q Consensus 323 ~~~l~~~l~~l~~l~~~~~~~Dv~~~~~---~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~--- 396 (583)
...-..++..++.++.++.+|||++.++ |+.|+|||.+|+++|+||++||.+ +|.|+. ...|.++
T Consensus 13 ~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~--~~~e~~-------~~~i~l~~~~ 83 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG--QFSESR-------SGRVEMRKWS 83 (279)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------------EEECCCCS
T ss_pred HhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC--CCcccc-------CCeEEecccc
Confidence 3455667788888999999999999998 999999999999999999999998 777764 3578888
Q ss_pred ---CCCHHHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHH
Q 007949 397 ---DLSKETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKV 473 (583)
Q Consensus 397 ---~v~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L 473 (583)
++++++|+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+ +++||+.++.+|..|++..|
T Consensus 84 ~~~~v~~~~f~~ll~~~Ytg~~-~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L 159 (279)
T 3i3n_A 84 SEPGPEPDTVEAVIEYMYTGRI-RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL---HLSNCVAIHSLAHMYTLSQL 159 (279)
T ss_dssp STTCSCHHHHHHHHHHHHHSEE-EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CTTTHHHHHHHHHHTTCHHH
T ss_pred ccCCCCHHHHHHHHHhhCcCCc-ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC---CcchHHHHHHHHHHcCcHHH
Confidence 8999999999999999999 7899999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhHHHhhCchhHHHHHhcCCCCCCCcccc-ccCCCCCCccccCCCccchHHHHHHHHHHHhhhhhcchhhH
Q 007949 474 REYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFR-TTVPSAPGAIINVDQGNLLDDLREKWLEAEAAELDKRDESA 552 (583)
Q Consensus 474 ~~~c~~~i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~-~~~~~~~~~~ee~d~~e~~~~~~~~Wl~~~~~~~~~~~~~~ 552 (583)
.+.|.+||.+||..+..+++|.+|+.+ .+.. +.++++.+.+| .+++ +++++|+++++.. |..+.
T Consensus 160 ~~~~~~~i~~~f~~v~~~~~f~~L~~~-------~l~~lL~~d~L~v~sE----~~vf-~av~~W~~~~~~~---r~~~~ 224 (279)
T 3i3n_A 160 ALKAADMIRRNFHKVIQDEEFYTLPFH-------LIRDWLSDLEITVDSE----EVLF-ETVLKWVQRNAEE---RERYF 224 (279)
T ss_dssp HHHHHHHHHHTHHHHTTSSGGGGSCHH-------HHHHHHTCSSCCCSCH----HHHH-HHHHHHHHTTHHH---HTTTH
T ss_pred HHHHHHHHHHHHHHHhcCcChhcCCHH-------HHHHHhcCcCCCCCCH----HHHH-HHHHHHHHcCHHH---HHHHH
Confidence 999999999999999999999987665 2222 25566667778 5777 9999999998764 45566
Q ss_pred HhHHHHHHHHHHHhh
Q 007949 553 LMFDKRLEMLMQVAK 567 (583)
Q Consensus 553 ~~~~~~~~~~~~~~~ 567 (583)
..+++.+|+++.+.+
T Consensus 225 ~~ll~~VRf~l~~~~ 239 (279)
T 3i3n_A 225 EELFKLLRLSQMKPT 239 (279)
T ss_dssp HHHHTTSCGGGSCHH
T ss_pred HHHHHhcCCCCCCHH
Confidence 777777777665544
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=2.5e-26 Score=210.97 Aligned_cols=159 Identities=24% Similarity=0.366 Sum_probs=136.6
Q ss_pred cccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCC
Q 007949 319 IDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDL 398 (583)
Q Consensus 319 ~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v 398 (583)
...|+..+.+ .++.+++++.+|||++.++|+.|+|||.+|+++|+||++||.+ +|.|+. ...|.++++
T Consensus 14 ~~~p~~~l~~---~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~--~~~e~~-------~~~i~l~~~ 81 (172)
T 3htm_A 14 VKVPECRLAD---ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EMEESK-------KNRVEINDV 81 (172)
T ss_dssp SCCCCCCHHH---HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHS--CCCGGG-------TTEEEECSS
T ss_pred CCCCHHHHHH---HHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHcc--CccccC-------CCeEEecCC
Confidence 3444444443 3444677799999999999999999999999999999999998 777764 368999999
Q ss_pred CHHHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHH
Q 007949 399 SKETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCL 478 (583)
Q Consensus 399 ~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~ 478 (583)
++++|+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+ +++||+.++.+|..|++..|++.|.
T Consensus 82 ~~~~f~~~l~~~Yt~~~-~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~A~~~~~~~L~~~~~ 157 (172)
T 3htm_A 82 EPEVFKEMMCFIYTGKA-PNLDKMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQLKTQAV 157 (172)
T ss_dssp CHHHHHHHHHHHHHSCC-TTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC---CTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCC-CCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999 7899999999999999999999999999999998 8999999999999999999999999
Q ss_pred HHHHhhHHHhhCchh
Q 007949 479 EVIACNFETFADSRE 493 (583)
Q Consensus 479 ~~i~~nf~~v~~~~~ 493 (583)
+||.+||..++.+++
T Consensus 158 ~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 158 DFINYHATDVLETSG 172 (172)
T ss_dssp HHHHHTC--------
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999988763
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.90 E-value=7e-24 Score=213.82 Aligned_cols=159 Identities=24% Similarity=0.366 Sum_probs=132.8
Q ss_pred cccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCC
Q 007949 319 IDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDL 398 (583)
Q Consensus 319 ~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v 398 (583)
+..|+..+.+. +..++.++.+|||++.++|+.|+|||.+|++||+||++||.+ +|.|+. ...|.++++
T Consensus 154 ~~~p~~~l~~~---l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~--~~~e~~-------~~~i~l~~~ 221 (312)
T 3hqi_A 154 VKVPECRLADE---LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EMEESK-------KNRVEINDV 221 (312)
T ss_dssp CCCCCCCHHHH---HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-------C-------CSEEEECSS
T ss_pred cCCCCchHHHH---HHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhcc--CccccC-------CceEEecCC
Confidence 34455444433 444667799999999999999999999999999999999998 676653 468999999
Q ss_pred CHHHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHHHHH
Q 007949 399 SKETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCL 478 (583)
Q Consensus 399 ~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~ 478 (583)
++++|+.+|+|+||+.+ .++.+++.+|+.+|++|+++.|+..|+++|.+.+ +.+||+.++.+|..|++..|++.|.
T Consensus 222 ~~~~f~~~L~~iYt~~~-~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~l~~A~~~~~~~L~~~~~ 297 (312)
T 3hqi_A 222 EPEVFKEMMCFIYTGKA-PNLDKMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQLKTQAV 297 (312)
T ss_dssp CHHHHHHHHHHHHHSCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---CTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHhhcCCCC-CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999 6888999999999999999999999999999988 8999999999999999999999999
Q ss_pred HHHHhhHHHhhCchh
Q 007949 479 EVIACNFETFADSRE 493 (583)
Q Consensus 479 ~~i~~nf~~v~~~~~ 493 (583)
+||+.||..++.+++
T Consensus 298 ~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 298 DFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHTC--------
T ss_pred HHHHHHHHHHhhCCC
Confidence 999999999988763
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.9e-23 Score=185.95 Aligned_cols=131 Identities=27% Similarity=0.390 Sum_probs=95.6
Q ss_pred HhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhc
Q 007949 332 AMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY 411 (583)
Q Consensus 332 ~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iY 411 (583)
.++.+++++.+|||++.++|+.|+|||.+|+++|+||++||.+ +|.|+.. ..|.++++++++|+.+++|+|
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~--~~~e~~~-------~~i~l~~~~~~~~~~~l~~~Y 85 (145)
T 4eoz_A 15 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EMEESKK-------NRVEINDVEPEVFKEMMCFIY 85 (145)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHS--SSHHHHH-------TEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcC--CCcCCCC-------ceEEecCCCHHHHHHHHHhhc
Confidence 3444667799999999999999999999999999999999998 7777643 589999999999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHHHH
Q 007949 412 TDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVRE 475 (583)
Q Consensus 412 t~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~ 475 (583)
||.+ .++.+++.+++.+|++|+++.|+..|+++|.+.+ +.+||+.++.+|..|++..|++
T Consensus 86 ~~~~-~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 86 TGKA-PNLDKMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HSCC-TTGGGTHHHHHHHHHHTTCHHHHHHHHCC------------------------------
T ss_pred cCcc-CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCHHHhcC
Confidence 9999 7899999999999999999999999999999998 8999999999999999999874
No 6
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.87 E-value=8.3e-23 Score=199.85 Aligned_cols=185 Identities=16% Similarity=0.230 Sum_probs=139.3
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCC--CCcccEEEcCCCCHHHHHHHhhhhcC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWR--YRNEIRFSREKLSYPALYGLIHFFYS 231 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~--e~~~~~i~l~~v~~~~~~~lL~ylYt 231 (583)
.+..+..++.+ |||+|.|+|+.|+|||.||+++|+||++||.+++. ++....|.++++++++|+.+++|+||
T Consensus 21 ~l~~l~~~~~~------~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt 94 (256)
T 3hve_A 21 ALSSFREESRF------CDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 94 (256)
T ss_dssp HHHTCCC--CC------CCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC------cceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccC
Confidence 44455555554 59999999999999999999999999999999887 66778999999999999999999999
Q ss_pred CcccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHH
Q 007949 232 DRLEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAA 301 (583)
Q Consensus 232 g~~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~ 301 (583)
|.+.++.+++.+++.+|..++++.|.+.+. ||+.++.+|..+++..|.+.|.+|+.++|.
T Consensus 95 ~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~---------- 164 (256)
T 3hve_A 95 GQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFR---------- 164 (256)
T ss_dssp SCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------
T ss_pred CCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH----------
Confidence 999999999999999999999998888765 689999999999999999999999998864
Q ss_pred HHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeee----ccCHHHHHHHc
Q 007949 302 LSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLA----SRSEYFKARLS 373 (583)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~----~~S~~F~~~~~ 373 (583)
++ ...++|..++.+.+..++++ + ++.+..|...|.|...|+. .|..++..++.
T Consensus 165 -----~v----~~~~~f~~L~~~~l~~lL~~-------d---~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~ 221 (256)
T 3hve_A 165 -----DV----SSTEEFLELSPQKLKEVISL-------E---KLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMS 221 (256)
T ss_dssp -----HH----TTCHHHHSSCHHHHHHHHHC-------C----------CTTHHHHTTTCCC--CCSTTTHHHHHH
T ss_pred -----HH----hCCcchhcCCHHHHHHHHcc-------C---CCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 11 13567899999999999987 5 5666556666666555543 23344444444
No 7
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.86 E-value=5.5e-23 Score=203.74 Aligned_cols=224 Identities=11% Similarity=0.185 Sum_probs=167.6
Q ss_pred ccccccCCCCCCCCCCCcEEEEEC---CEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcC------CCCHHHHHHH
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQ---GRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE------KLSYPALYGL 225 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~---~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~------~v~~~~~~~l 225 (583)
+..+..++.++ ||+|.|+ |+.|+|||.||+++|+||++||.++|.|+....|.++ ++++++|+.+
T Consensus 23 l~~l~~~~~~~------Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~l 96 (279)
T 3i3n_A 23 QNEQRRQGLFC------DITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAV 96 (279)
T ss_dssp HHHHHHHTTTC------CEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHH
T ss_pred HHHHHhcCCCC------CeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHH
Confidence 33455555555 9999998 9999999999999999999999999999988899998 8999999999
Q ss_pred hhhhcCCcccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCcc
Q 007949 226 IHFFYSDRLEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSALPEE 295 (583)
Q Consensus 226 L~ylYtg~~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~ 295 (583)
|+|+|||.+.++.+++.+++.+|..++++.|.+.+. ||+.++.+|..+++..|...|.+|+.++|.
T Consensus 97 l~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~---- 172 (279)
T 3i3n_A 97 IEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFH---- 172 (279)
T ss_dssp HHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHH----
T ss_pred HHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHH----
Confidence 999999999999999999999999999888888765 689999999999999999999999999864
Q ss_pred CchhHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeee----ccCHHHHHH
Q 007949 296 DRLPAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLA----SRSEYFKAR 371 (583)
Q Consensus 296 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~----~~S~~F~~~ 371 (583)
++ ...++|..++.+.+..++++ + ++.+..|...|.|...|+. .|..++..+
T Consensus 173 -----------~v----~~~~~f~~L~~~~l~~lL~~-------d---~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~l 227 (279)
T 3i3n_A 173 -----------KV----IQDEEFYTLPFHLIRDWLSD-------L---EITVDSEEVLFETVLKWVQRNAEERERYFEEL 227 (279)
T ss_dssp -----------HH----TTSSGGGGSCHHHHHHHHTC-------S---SCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHH
T ss_pred -----------HH----hcCcChhcCCHHHHHHHhcC-------c---CCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 11 14678999999999999876 4 4544445566777666653 355667777
Q ss_pred HcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCc
Q 007949 372 LSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLL 435 (583)
Q Consensus 372 ~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~ 435 (583)
+.. |+++.+++..+..++ -+..+ -.....+.+++..|..|++
T Consensus 228 l~~------------------VRf~l~~~~~L~~~v---~~~~l-~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 228 FKL------------------LRLSQMKPTYLTRHV---KPERL-VANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HTT------------------SCGGGSCHHHHHHTT---TTSHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHh------------------cCCCCCCHHHHHHHh---hccch-hcCCHHHHHHHHHHHHhcc
Confidence 764 677778877765433 22222 1122356666666665544
No 8
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.85 E-value=4.8e-21 Score=174.80 Aligned_cols=127 Identities=24% Similarity=0.300 Sum_probs=118.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
-++...++ |+|+|.+|..|+|| ||+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 18 ~~v~~Ll~~Gadvn~~d~~g~t~--------l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~L 89 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDSDGRTP--------LHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 89 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHH
Confidence 45566666 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++.+|..|+| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 90 l~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~--~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 90 ISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT--SDSDGRTPLDLAREHGN 148 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCC
Confidence 9999999999999999 577777 89999999999999888 78999999999998776
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.83 E-value=1.1e-20 Score=162.05 Aligned_cols=111 Identities=23% Similarity=0.328 Sum_probs=98.4
Q ss_pred HHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHH
Q 007949 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (583)
Q Consensus 326 l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~ 405 (583)
...+++.++.+++++.+|||++.++|+.|+|||.+|+++|+||++||.+ +|.|+. ...|.++++++++|+.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~--~~~e~~-------~~~i~l~~~~~~~f~~ 79 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTS--GAVVDQ-------QNVYEIDFVSAEALTA 79 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-------C-------CSEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcC--CccccC-------CceEEeCCCCHHHHHH
Confidence 4456677777888999999999999999999999999999999999998 777663 4689999999999999
Q ss_pred HhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHH
Q 007949 406 MIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVL 446 (583)
Q Consensus 406 ~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l 446 (583)
+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|
T Consensus 80 ll~~~Yt~~~-~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 80 LMDFAYTATL-TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHSCC-CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCC-ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9999999999 799999999999999999999999999987
No 10
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.82 E-value=3.8e-20 Score=169.55 Aligned_cols=132 Identities=20% Similarity=0.277 Sum_probs=121.1
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.++....|.++++++++|+.+|+|+|||.
T Consensus 24 ~l~~l~~~~~~~------Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~ 97 (172)
T 3htm_A 24 ELGGLWENSRFT------DCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 97 (172)
T ss_dssp HHHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCc------ceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCC
Confidence 444566666655 99999999999999999999999999999999999988999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
+.++.+++.+++.+|+.++++.|.+.+. |++.++.+|..++++.|...|.+|+.+||.
T Consensus 98 ~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 98 APNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888765 689999999999999999999999999986
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.82 E-value=2e-20 Score=157.56 Aligned_cols=104 Identities=28% Similarity=0.365 Sum_probs=92.3
Q ss_pred cccCCCCCcEEEEECC----EEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhc
Q 007949 336 SDHVDDLADVCVRVDK----KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY 411 (583)
Q Consensus 336 l~~~~~~~Dv~~~~~~----~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iY 411 (583)
+++++.+|||++.+++ +.|+|||.+|+++|+||++||.+ +|.|+ . ..|.++++++++|+.+++|+|
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~--~~~e~-------~-~~i~l~~~~~~~f~~~l~~iY 71 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYG--DLAEV-------K-SEIHIPDVEPAAFLILLKYMY 71 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------------C-CEEEETTSCHHHHHHHHHHHH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcC--CcccC-------C-CeEEeCCCCHHHHHHHHHHHc
Confidence 5677999999999998 89999999999999999999998 77765 3 589999999999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhc
Q 007949 412 TDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHL 450 (583)
Q Consensus 412 t~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 450 (583)
||.+ .++.+++.+++.+|++|+++.|++.|+++|.+++
T Consensus 72 t~~~-~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 72 SDEI-DLEADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HCCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCCc-cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 9999 7999999999999999999999999999998764
No 12
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.82 E-value=2.6e-20 Score=161.44 Aligned_cols=115 Identities=19% Similarity=0.288 Sum_probs=103.8
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeec-CCCCHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE-HDLSKET 402 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l-~~v~~~~ 402 (583)
.....+++.++.++.++.+|||++.++|+.|+|||.||+++|+||++||.+ +|.| ....|.+ +++++++
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~--~~~e--------~~~~i~l~~~~~~~~ 80 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTD--QLKR--------NLSVINLDPEINPEG 80 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTS--TTTT--------TCSEEECCTTSCHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcC--CccC--------CCCEEEeCCCCCHHH
Confidence 334566777788889999999999999999999999999999999999998 6666 2357999 9999999
Q ss_pred HHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhh
Q 007949 403 FEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLH 449 (583)
Q Consensus 403 ~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 449 (583)
|+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.++
T Consensus 81 f~~ll~~~Ytg~~-~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 81 FNILLDFMYTSRL-NLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHHSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCc-CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999999 799999999999999999999999999999753
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=1.8e-20 Score=165.80 Aligned_cols=117 Identities=17% Similarity=0.273 Sum_probs=101.3
Q ss_pred chhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHH
Q 007949 322 GICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKE 401 (583)
Q Consensus 322 ~~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~ 401 (583)
.+.....+++.++.++.++.+|||++.++|+.|+|||.||+++|+||++||.+ +|.|.. +....|.+++++++
T Consensus 27 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~--~~~e~e-----~~~~~I~l~~v~~~ 99 (144)
T 2ppi_A 27 DPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNY--NPPKDD-----GSTYKIELEGISVM 99 (144)
T ss_dssp CTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH--CC----------CCCEEECCSSCHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcC--CCcccc-----CCCcEEEeCCCCHH
Confidence 34556678888888999999999999999999999999999999999999997 665531 13468999999999
Q ss_pred HHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHH
Q 007949 402 TFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVL 446 (583)
Q Consensus 402 ~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l 446 (583)
+|+.+|+|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|
T Consensus 100 ~f~~lL~fiYtg~~-~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 100 VMREILDYIFSGQI-RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHHTTSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCC-CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99999999999999 799999999999999999999999999876
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.82 E-value=2.2e-20 Score=160.26 Aligned_cols=111 Identities=23% Similarity=0.290 Sum_probs=100.5
Q ss_pred hHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHH
Q 007949 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFE 404 (583)
Q Consensus 325 ~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~ 404 (583)
.-..+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ ....|.++++++++|+
T Consensus 11 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--------------~~~~i~l~~~~~~~f~ 76 (121)
T 1buo_A 11 HPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHR--------------NSQHYTLDFLSPKTFQ 76 (121)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTS--------------CCSEEEECSSCHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcC--------------CCcEEEeCCCCHHHHH
Confidence 34456667777888899999999999999999999999999999999986 2357999999999999
Q ss_pred HHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhc
Q 007949 405 KMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHL 450 (583)
Q Consensus 405 ~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 450 (583)
.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+
T Consensus 77 ~ll~~~Ytg~~-~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 77 QILEYAYTATL-QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp HHHHHHHHSCC-CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHhhcCCCc-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 99999999999 7999999999999999999999999999997653
No 15
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=1e-20 Score=166.43 Aligned_cols=119 Identities=21% Similarity=0.332 Sum_probs=106.0
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC-CCCHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKET 402 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~v~~~~ 402 (583)
..-..+++.++.++.++.+|||++.++|+.|+|||.||+++|+||++||.+ +|.|+ ..|.++ ++++++
T Consensus 18 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~~e~---------~~i~l~~~v~~~~ 86 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVG--QTDAE---------LTVTLPEEVTVKG 86 (138)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT--CCCTT---------EEEECCTTSCHHH
T ss_pred chHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhc--CCCCC---------ceEEeCCCCCHHH
Confidence 344566777778888899999999999999999999999999999999997 66553 368885 899999
Q ss_pred HHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhh
Q 007949 403 FEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAE 457 (583)
Q Consensus 403 ~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n 457 (583)
|+.+|+|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+ +.+|
T Consensus 87 ~~~lL~~~Ytg~~-~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l---~~sn 137 (138)
T 2z8h_A 87 FEPLIQFAYTAKL-ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF---LDST 137 (138)
T ss_dssp HHHHHHHHHHSCC-CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC---SCCC
T ss_pred HHHHHHHhcCCCc-ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc---cccc
Confidence 9999999999999 7999999999999999999999999999999988 4544
No 16
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=159.80 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=98.3
Q ss_pred HHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHH
Q 007949 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (583)
Q Consensus 326 l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~ 405 (583)
...+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ +| ...|.++++++++|+.
T Consensus 8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~-----------~~~i~l~~~~~~~f~~ 74 (119)
T 3b84_A 8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGD--GS-----------GGSVVLPAGFAEIFGL 74 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT--TT-----------CCCEEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCC--CC-----------CCeEEeCCCCHHHHHH
Confidence 4456677777888899999999999999999999999999999999997 33 2468999999999999
Q ss_pred HhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhh
Q 007949 406 MIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLH 449 (583)
Q Consensus 406 ~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 449 (583)
+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 75 ll~~iYtg~~-~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 75 LLDFFYTGHL-ALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHHHcCCCC-ccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 9999999999 799999999999999999999999999998653
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.80 E-value=6.9e-20 Score=156.02 Aligned_cols=108 Identities=22% Similarity=0.289 Sum_probs=96.9
Q ss_pred HHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC--CCCHHHH
Q 007949 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--DLSKETF 403 (583)
Q Consensus 326 l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~--~v~~~~~ 403 (583)
-..+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ + ....|.++ ++++++|
T Consensus 6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~--~-----------~~~~i~l~~~~~~~~~f 72 (116)
T 2vpk_A 6 CEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRS--T-----------SENNVFLDQSQVKADGF 72 (116)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT--C-----------CCSCEECCTTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcC--C-----------CCCeEEeecCCCCHHHH
Confidence 3456677777888899999999999999999999999999999999997 2 12356666 9999999
Q ss_pred HHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHH
Q 007949 404 EKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLL 447 (583)
Q Consensus 404 ~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 447 (583)
+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 73 ~~ll~~~Yt~~~-~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 73 QKLLEFIYTGTL-NLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHHSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCc-ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999 7999999999999999999999999999984
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=3.8e-20 Score=158.26 Aligned_cols=109 Identities=21% Similarity=0.319 Sum_probs=99.0
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~ 403 (583)
.....+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ ....|.++++++++|
T Consensus 9 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~--------------~~~~i~l~~~~~~~f 74 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD--------------QKDVVHLDISNAAGL 74 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH--------------CCSGGGGGGCCHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC--------------CCCEEEeCCCCHHHH
Confidence 344567777888888999999999999999999999999999999999986 234688899999999
Q ss_pred HHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHH
Q 007949 404 EKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLL 447 (583)
Q Consensus 404 ~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 447 (583)
+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 75 ~~ll~~~Ytg~~-~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 75 GQVLEFMYTAKL-SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHHSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCC-ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999 7999999999999999999999999999884
No 19
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.79 E-value=3.5e-20 Score=162.11 Aligned_cols=112 Identities=14% Similarity=0.173 Sum_probs=98.6
Q ss_pred hHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHH
Q 007949 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFE 404 (583)
Q Consensus 325 ~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~ 404 (583)
....+++.|+.++.++.+|||++.++|+.|+|||.||+++|+||++||.+ +| ...|.++++++++|+
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~--~~-----------~~~i~l~~~~~~~f~ 74 (135)
T 2yy9_A 8 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGD--GT-----------GGSVVLPAGFAEIFG 74 (135)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------------CCEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcC--CC-----------CCeEEeCCCCHHHHH
Confidence 34566777888899999999999999999999999999999999999997 43 246899999999999
Q ss_pred HHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhc
Q 007949 405 KMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHL 450 (583)
Q Consensus 405 ~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 450 (583)
.+|+|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.+
T Consensus 75 ~lL~fiYtg~~-~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l 119 (135)
T 2yy9_A 75 LLLDFFYTGHL-ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTS 119 (135)
T ss_dssp HHHHHHHHSCC-CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---
T ss_pred HHHHHHhCCCC-CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 99999999999 7999999999999999999999999999998887
No 20
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.77 E-value=1.1e-18 Score=149.57 Aligned_cols=104 Identities=22% Similarity=0.415 Sum_probs=89.2
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.++|.++....|.++++++++|+.+|+|+|||.
T Consensus 15 ~l~~l~~~~~~~------Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 15 GLNEQRTQGLLC------DVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHHHHTTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCC------CeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 344455555555 99999999999999999999999999999999999988999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHHHH
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIEKE 263 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~~~ 263 (583)
+.++.+++.+++.+|+.++++.|.+.+...
T Consensus 89 ~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~ 118 (120)
T 2if5_A 89 LTVSTANVGDILSAARLLEIPAVSHVCADL 118 (120)
T ss_dssp CCCCGGGHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999999988887643
No 21
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.2e-18 Score=152.84 Aligned_cols=118 Identities=26% Similarity=0.344 Sum_probs=107.8
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+|+ .+|..|+|| ||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 G~d~-~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETL--------LHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp ---C-CCCTTCCCH--------HHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCC-CcCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 5677 689999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..+.
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA--VNIFGLRPVDYTDDESM 121 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCGGGGCCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHhhccH
Confidence 9999998 577777 89999999999999887 78999999999997555
No 22
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.77 E-value=4.7e-19 Score=155.47 Aligned_cols=118 Identities=22% Similarity=0.140 Sum_probs=111.2
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
+.++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.
T Consensus 2 ~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~ 72 (136)
T 1d9s_A 2 SPGIHMLGGSSDAG--------LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC 72 (136)
T ss_dssp CCCCSCCCCCCSCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC
T ss_pred CCCccCCCCCCccH--------HHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 57899999999999 899999999999999999999999999999999999999 999999999999999999
Q ss_pred cCCC-Cch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFD-GDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~-g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+.. |.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV--CDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC--CSSSSSCHHHHHHHHTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHHHcCC
Confidence 9999 898 577777 89999999999999887 78899999999998776
No 23
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.77 E-value=2.9e-20 Score=160.61 Aligned_cols=112 Identities=22% Similarity=0.320 Sum_probs=100.1
Q ss_pred hhhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCC-CCHH
Q 007949 323 ICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHD-LSKE 401 (583)
Q Consensus 323 ~~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~-v~~~ 401 (583)
...-..+++.++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ +|.| ...|.+++ ++++
T Consensus 13 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~~e---------~~~i~l~~~~~~~ 81 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVG--QTKN---------DLVVSLPEEVTAR 81 (125)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTT--CCCS---------SCEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcC--CCCC---------CcEEEeCCCCCHH
Confidence 3445567777888888999999999999999999999999999999999997 5554 24789998 9999
Q ss_pred HHHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHH
Q 007949 402 TFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVL 446 (583)
Q Consensus 402 ~~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l 446 (583)
+|+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|
T Consensus 82 ~f~~~l~~iYtg~~-~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 82 GFGPLLQFAYTAKL-LLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHTTSEE-EECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHhHcCCce-EECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999 789999999999999999999999997653
No 24
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.77 E-value=2.1e-18 Score=173.62 Aligned_cols=131 Identities=20% Similarity=0.280 Sum_probs=114.8
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcc
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRL 234 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~ 234 (583)
+..++.++.+ +||+|.|+|+.|+|||.||++|||||++||.+++.++....|.++++++++|+.+|+|+|||.+
T Consensus 165 l~~l~~~~~~------~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~ 238 (312)
T 3hqi_A 165 LGGLWENSRF------TDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKA 238 (312)
T ss_dssp HHHHHHTTCS------CCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHhCCCC------CceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCC
Confidence 3344445454 5999999999999999999999999999999999999889999999999999999999999999
Q ss_pred cCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHHHHHHHHHHhcCC
Q 007949 235 EIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (583)
Q Consensus 235 ~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~ 291 (583)
+++.+++.+++.+|+.++++.|++.++ |++.++.+|..+++..|.+.|..|+..++.
T Consensus 239 ~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 239 PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988876 678899999999999999999999999975
No 25
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=145.14 Aligned_cols=96 Identities=21% Similarity=0.283 Sum_probs=82.6
Q ss_pred CCCCCcEEEEECC----EeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHH
Q 007949 167 DSFPPDVVFYVQG----RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME 242 (583)
Q Consensus 167 ~~~~~Dv~~~v~~----~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~ 242 (583)
++.+|||+|.+++ +.|+|||.||+++|+||++||.++|.++. ..|.++++++++|+.+|+|+|||.+.++.+++.
T Consensus 5 ~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~~~ 83 (109)
T 2vkp_A 5 NELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEADTVL 83 (109)
T ss_dssp CCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTTTHH
T ss_pred CCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHHHHH
Confidence 3456699999988 89999999999999999999999999888 889999999999999999999999999999999
Q ss_pred HHHHHHhHhchHHHHHHHHHH
Q 007949 243 DLVKICKVCKCESLQRIIEKE 263 (583)
Q Consensus 243 ~ll~~a~~~~~~~l~~~l~~~ 263 (583)
+++.+|+.++++.|++.+...
T Consensus 84 ~ll~~A~~~~~~~L~~~c~~~ 104 (109)
T 2vkp_A 84 ATLYAAKKYIVPALAKACVNF 104 (109)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHH
Confidence 999999999888888777643
No 26
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.77 E-value=3.2e-20 Score=159.94 Aligned_cols=110 Identities=22% Similarity=0.342 Sum_probs=96.3
Q ss_pred HHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeec-CCCCHHHHH
Q 007949 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE-HDLSKETFE 404 (583)
Q Consensus 326 l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l-~~v~~~~~~ 404 (583)
-..+++.++.++.++.+|||++.++|+.|+|||.||+++|+||++||.+ +|.|+ ..|.+ .++++++|+
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~--~~~e~---------~~i~l~~~v~~~~f~ 81 (124)
T 2ihc_A 13 STNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVG--QADGE---------LNITLPEEVTVKGFE 81 (124)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTT--C---C---------EEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcC--CCCCC---------ceEeecCCcCHHHHH
Confidence 3456667777888899999999999999999999999999999999997 66553 36888 489999999
Q ss_pred HHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHH
Q 007949 405 KMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLL 447 (583)
Q Consensus 405 ~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 447 (583)
.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 82 ~lL~~iYtg~~-~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 82 PLIQFAYTAKL-ILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHSEE-EEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHhcCCCc-ccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999999 7889999999999999999999999998764
No 27
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.76 E-value=4.5e-19 Score=157.53 Aligned_cols=120 Identities=20% Similarity=0.291 Sum_probs=93.2
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.++....|.++++++++|+.+|+|+|||.
T Consensus 15 ~l~~l~~~~~~~------Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~ 88 (145)
T 4eoz_A 15 ELGGLWENSRFT------DCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 88 (145)
T ss_dssp HHHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCc------ceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCc
Confidence 344555666655 99999999999999999999999999999999988888899999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHH----------HHHHHHHHHHHcCChhHH
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVD 279 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~----------~~l~~~~~a~~~~~~~l~ 279 (583)
+.++.+++.+++.+|+.++++.|.+.+. ||+.++.+|..+++..|.
T Consensus 89 ~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 89 APNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp CTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred cCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 9999999999999999999999988876 678888888888877664
No 28
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.76 E-value=3.5e-18 Score=155.80 Aligned_cols=126 Identities=24% Similarity=0.326 Sum_probs=115.8
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+
T Consensus 29 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 100 (169)
T 2y1l_E 29 EVRILMANGADVNAEDASGWTP--------LHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL 100 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444454 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 101 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 101 KNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA--QDKFGKTAFDISIDNGN 158 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHhCC
Confidence 999999999999998 577777 89999999999999877 78899999999998776
No 29
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.76 E-value=3.8e-18 Score=147.73 Aligned_cols=103 Identities=19% Similarity=0.269 Sum_probs=91.7
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEc-CCCCHHHHHHHhhhhcCC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR-EKLSYPALYGLIHFFYSD 232 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l-~~v~~~~~~~lL~ylYtg 232 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.+ ....|.+ +++++++|+.+|+|+|||
T Consensus 19 ~l~~l~~~~~~~------Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg 91 (127)
T 1r29_A 19 NLNRLRSRDILT------DVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTS 91 (127)
T ss_dssp HHHHHHHTTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCC------CEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCC
Confidence 344555565555 99999999999999999999999999999999988 7788999 999999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHHHHHH
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRIIEKE 263 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~l~~~ 263 (583)
.+.++.+++.+++.+|+.++++.|.+.+.+.
T Consensus 92 ~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~ 122 (127)
T 1r29_A 92 RLNLREGNIMAVMATAMYLQMEHVVDTCRKF 122 (127)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999888888777643
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.76 E-value=3.2e-18 Score=168.52 Aligned_cols=134 Identities=19% Similarity=0.244 Sum_probs=104.8
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCC-------------------------CCCcHHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLK-------------------------KVPNGDVFEASRAGDVDRLRYILESGVNVNA 61 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~-------------------------~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~ 61 (583)
++...+. |+++|.+|..|+|||+ ..+.+++|+|+..++.++++.|++.|+++|.
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC
Confidence 3444554 8888888888888853 1344556677777777777777777788888
Q ss_pred cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhc
Q 007949 62 RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLG 138 (583)
Q Consensus 62 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A 138 (583)
+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~--~d~~G~TpL~~A 225 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV--LNKRQRTAVDCA 225 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC--CCTTSCCSGGGS
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHH
Confidence 8889999999999999999999999999999999999998 577777 88899999999998877 788899999999
Q ss_pred ccccc
Q 007949 139 CGANR 143 (583)
Q Consensus 139 ~~~~~ 143 (583)
+.+++
T Consensus 226 ~~~~~ 230 (269)
T 4b93_B 226 EQNSK 230 (269)
T ss_dssp CTTCH
T ss_pred HhCCc
Confidence 87654
No 31
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.75 E-value=2.2e-19 Score=155.96 Aligned_cols=112 Identities=19% Similarity=0.292 Sum_probs=94.6
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecC-CCCHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKET 402 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~v~~~~ 402 (583)
..-..++..++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ + ....|.++ ++++++
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~--~-----------~~~~i~l~~~~~~~~ 81 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNN--S-----------RSAVVELPAAVQPQS 81 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHH--C-----------CCSEEECCTTCCHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcC--C-----------CCCEEEECCCCCHHH
Confidence 344556777888899999999999999999999999999999999999996 2 23579996 899999
Q ss_pred HHHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhh
Q 007949 403 FEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLH 449 (583)
Q Consensus 403 ~~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 449 (583)
|+.+++|+|||.+ .++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 82 f~~ll~~iYtg~~-~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 82 FQQILSFCYTGRL-SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHHSEE-ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHHhCCcc-ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999999 799999999999999999999999999999764
No 32
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.75 E-value=4.9e-18 Score=152.04 Aligned_cols=125 Identities=20% Similarity=0.257 Sum_probs=112.7
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |.+++ .|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 17 ~v~~Ll~~g~~~~-~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 17 EVRILMANGAPFT-TDWLGTSP--------LHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHHHHHHHTCCCC-CCTTCCCH--------HHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHcCCCCC-cCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 3344444 66666 58889999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 88 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT--QSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCC
Confidence 999999999999998 577777 89999999999999887 78899999999998776
No 33
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.75 E-value=5.2e-18 Score=154.20 Aligned_cols=127 Identities=21% Similarity=0.318 Sum_probs=116.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |.++|.+|..|+|| ||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|
T Consensus 17 ~~v~~ll~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (167)
T 3v31_A 17 LYLATRIEQENVINHTDEEGFTP--------LMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88 (167)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCCCCCCCH--------HHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 34444454 78899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..++
T Consensus 89 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 89 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI--ETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTC
T ss_pred HHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCc
Confidence 9999999999999998 577777 89999999999999887 78899999999998777
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.75 E-value=4.8e-18 Score=154.87 Aligned_cols=110 Identities=24% Similarity=0.334 Sum_probs=96.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...+. |++++.+|..|+|| ||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|
T Consensus 51 ~~~~~ll~~gad~~~~d~~g~Tp--------Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 122 (169)
T 4gpm_A 51 EVVKLLISKGADVNAKDSDGRTP--------LHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 122 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhcccchhhhccCCCCH--------HHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455555 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCCCC
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPP 124 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~ 124 (583)
+++|++++.+|..|.|| |+|+. +.+++++|+++|+++.-
T Consensus 123 l~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 123 ISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999995 66666 89999999999998754
No 35
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.75 E-value=7.3e-18 Score=157.00 Aligned_cols=126 Identities=21% Similarity=0.222 Sum_probs=109.6
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...+. |++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 50 ~v~~Ll~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (192)
T 2rfm_A 50 AIDKLVENFDKLEDKDIEGSTA--------LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL 121 (192)
T ss_dssp GHHHHHHHHCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhccccccccccCccH--------HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3444444 77888888889999 79999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..++
T Consensus 122 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 122 EHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA--RDLTGLTAEASARIFGR 179 (192)
T ss_dssp HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC--BCTTSCBHHHHHHHTTC
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhCc
Confidence 999999999999998 577776 78899999999988877 68889999999998776
No 36
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.74 E-value=1.4e-17 Score=151.00 Aligned_cols=125 Identities=23% Similarity=0.269 Sum_probs=112.7
Q ss_pred hhhhcc--cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 9 IDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 9 ~~~~~~--~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+...+. +.+++..+..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 24 v~~ll~~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 95 (165)
T 3twr_A 24 VKKLCTVQSVNCRDIEGRQSTP--------LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV 95 (165)
T ss_dssp HHHHCCTTTTTCCCTTTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCCCccccccCCCCH--------HHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 344443 56788888899999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++..|..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+.++.
T Consensus 96 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~a~~~~~ 153 (165)
T 3twr_A 96 KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK--KNRDGNTPLDLVKDGDT 153 (165)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCTGGGSCTTCH
T ss_pred hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCChhHhHhcCCh
Confidence 999999999999998 577777 89999999999999887 78999999999987433
No 37
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.74 E-value=3.9e-18 Score=144.84 Aligned_cols=103 Identities=19% Similarity=0.307 Sum_probs=92.7
Q ss_pred hhHHHHHHHhcccccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHH
Q 007949 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (583)
Q Consensus 324 ~~l~~~l~~l~~l~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~ 403 (583)
+.-..++..++.++.++.+|||++.++|+.|+|||.+|+++|+||++||.+ ....|.++++++++|
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~--------------~~~~i~l~~~~~~~f 78 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSV--------------AGQVVELSFIRAEIF 78 (116)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTS--------------CCSEEEECSSCHHHH
T ss_pred cHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcC--------------CCCEEEeCCCCHHHH
Confidence 344566777777888899999999999999999999999999999999987 135799999999999
Q ss_pred HHHhhhhcCCCCCCCCHHhHHHHHHHHhccCchHHHH
Q 007949 404 EKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKR 440 (583)
Q Consensus 404 ~~~l~~iYt~~~~~i~~~~~~~ll~~A~~~~~~~l~~ 440 (583)
+.+++|+|||.++.++.+++.+++.+|++|+++.|++
T Consensus 79 ~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 79 AEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 9999999999995599999999999999999999864
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.74 E-value=1.2e-17 Score=153.74 Aligned_cols=119 Identities=24% Similarity=0.187 Sum_probs=112.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
+.++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 29 ~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 100 (179)
T 3f6q_A 29 ENDLNQGDDHGFSP--------LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 100 (179)
T ss_dssp TSCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cccccccCCCCCCH--------HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 67899999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.|..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..++
T Consensus 101 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 101 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSI--CNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB--CCTTSCCGGGGSCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch--hccCCCCcHHHHHHHHH
Confidence 9999998 577776 89999999999999887 78999999999997666
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.73 E-value=9.8e-18 Score=153.13 Aligned_cols=126 Identities=21% Similarity=0.234 Sum_probs=114.3
Q ss_pred chhhhcc-cCC-CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EID-LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~d-in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.+...+. +.+ ++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 17 ~v~~ll~~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (172)
T 3v30_A 17 QLKEHLRKGDNLVNKPDERGFTP--------LIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88 (172)
T ss_dssp HHHHHHTTCSGGGGCCCTTSCCH--------HHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCcccccCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHH
Confidence 3444444 444 88899999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 89 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 89 LERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT--EADSGYTPMDLAVALGY 147 (172)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTC
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHhCc
Confidence 9999999999999998 577777 89999999999999887 78899999999998777
No 40
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.73 E-value=8.1e-18 Score=148.65 Aligned_cols=102 Identities=17% Similarity=0.298 Sum_probs=88.0
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCC--CcccEEEcCCCCHHHHHHHhhhhcC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY--RNEIRFSREKLSYPALYGLIHFFYS 231 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e--~~~~~i~l~~v~~~~~~~lL~ylYt 231 (583)
.+..+..++.+ |||+|.++|+.|+|||.||+++|+||++||.+++.+ +....|.++++++++|+.+|+|+||
T Consensus 37 ~l~~l~~~~~~------~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 37 ALSSFREESRF------CDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp HHHHTTC--CC------CCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCC------cceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 44455555554 599999999999999999999999999999988765 5677899999999999999999999
Q ss_pred CcccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 232 DRLEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 232 g~~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
|.+.++.+++.+++.+|+.++++.|++.|.
T Consensus 111 g~~~i~~~~v~~ll~~A~~l~i~~L~~~C~ 140 (144)
T 2ppi_A 111 GQIRLNEDTIQDVVQAADLLLLTDLKTLCC 140 (144)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 999999999999999999999998888775
No 41
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.73 E-value=5.6e-18 Score=144.74 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=86.5
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcc
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRL 234 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~ 234 (583)
+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||++
T Consensus 15 l~~l~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 15 LNKQREKGQYC------DATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHhcCCCc------ceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 33455555555 999999999999999999999999999999876 45678889999999999999999999
Q ss_pred cCChhhHHHHHHHHhHhchHHHHHHHHH
Q 007949 235 EIAVDDMEDLVKICKVCKCESLQRIIEK 262 (583)
Q Consensus 235 ~i~~~~~~~ll~~a~~~~~~~l~~~l~~ 262 (583)
.++.+++.+++.+|+.++++.|.+.+.+
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~L~~~C~~ 112 (119)
T 3b84_A 85 ALTSGNRDQVLLAARELRVPEAVELCQS 112 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 9999999999999999988888887764
No 42
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.73 E-value=8.6e-18 Score=151.77 Aligned_cols=126 Identities=21% Similarity=0.181 Sum_probs=114.3
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...+. |+++|.+|..|+|| ||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 19 ~~v~~Ll~~~~~~~~~~~~g~t~--------L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 89 (162)
T 1ihb_A 19 EQLTSLLQNNVNVNAQNGFGRTA--------LQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTL 89 (162)
T ss_dssp HHHHHHTTSCCCTTCCCTTSCCH--------HHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhCCCCccccCccCccH--------HHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455555 89999999999999 799999 999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCC-CCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARP-PPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~-~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..+..|.| +|+|+. +.+++++|+++|++. +. .+..|.||||+|+..++
T Consensus 90 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 90 LEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH--RNHKGDTACDLARLYGR 149 (162)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC--cCCCCCcHHHHHHHcCC
Confidence 9999999999999998 577777 899999999999974 55 68899999999998776
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.73 E-value=7.7e-18 Score=165.82 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=97.4
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--h
Q 007949 32 VPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--N 108 (583)
Q Consensus 32 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~ 108 (583)
.|.|+||+|+..|+.+++++|++.|++++.++..|.||+|+|+..++.+++++|++.|++++.+|..|.| +|+|+. +
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 4678899999999999999999999999999999999999999999999999999999999999999998 577776 7
Q ss_pred HHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 109 ~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+++++|+++|++++. ++..|.||||+||..++
T Consensus 165 ~~~v~~Ll~~gadvn~--~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 165 HELVALLLQHGASINA--SNNKGNTALHEAVIEKH 197 (269)
T ss_dssp GGGHHHHHHTTCCTTC--BCTTSCBHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCc--cccCCCcHHHHHHHcCC
Confidence 8899999999988877 68889999999998776
No 44
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=141.01 Aligned_cols=99 Identities=15% Similarity=0.248 Sum_probs=84.9
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcC--CCCHHHHHHHhhhhcCC
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE--KLSYPALYGLIHFFYSD 232 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~--~v~~~~~~~lL~ylYtg 232 (583)
+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.++ . ...|.++ ++++++|+.+|+|+|||
T Consensus 13 l~~l~~~~~~~------Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--~--~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 13 LNKQREAGFLC------DCTIVIGEFQFKAHRNVLASFSEYFGAIYRST--S--ENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp HHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHTTC--C--CSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCCC------cEEEEECCEEEeccHHHHhhcCHHHHHHHcCC--C--CCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 33455555555 99999999999999999999999999999876 2 3345555 99999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHHHHHH
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRIIEKE 263 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~l~~~ 263 (583)
.+.++.+++.+++.+|+.++++.|.+.+.+.
T Consensus 83 ~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~ 113 (116)
T 2vpk_A 83 TLNLDSWNVKEIHQAADYLKVEEVVTKCKIK 113 (116)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999888888877643
No 45
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.72 E-value=2.1e-17 Score=148.19 Aligned_cols=117 Identities=20% Similarity=0.125 Sum_probs=108.9
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
+.++|..|..|+|| ||+ +..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 26 ~~~~~~~~~~g~t~--------L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 96 (156)
T 1bd8_A 26 LVHPDALNRFGKTA--------LQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNV 96 (156)
T ss_dssp CCCTTCCCTTSCCH--------HHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CcCccccCCCCCcH--------HHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 56899999999999 799 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.|..|.| +|+|+. +.+++++|++. ++++. ++..|.||||+|+..++
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~--~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 97 PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR--RDARGLTPLELALQRGA 145 (156)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC--CCTTSCCHHHHHHHSCC
T ss_pred cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC--cCCCCCCHHHHHHHcCc
Confidence 9999998 577777 89999999998 77666 78899999999998776
No 46
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.72 E-value=2.8e-17 Score=140.88 Aligned_cols=100 Identities=23% Similarity=0.382 Sum_probs=87.3
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
.+..+..++.++ ||++.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||+
T Consensus 18 ~l~~l~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~ 86 (121)
T 1buo_A 18 KANQMRLAGTLC------DVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTAT 86 (121)
T ss_dssp HHHHHHHHTTTC------CEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCC------CEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence 344555555555 99999999999999999999999999999864 3468889999999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHHHHH
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIEKEL 264 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~~~l 264 (583)
+.++.+++.+++.+|+.++++.|++.+.+.+
T Consensus 87 ~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l 117 (121)
T 1buo_A 87 LQAKAEDLDDLLYAAEILEIEYLEEQCLKML 117 (121)
T ss_dssp CCCCGGGHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 9999999999999999999988888876543
No 47
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.71 E-value=3.2e-18 Score=145.74 Aligned_cols=93 Identities=20% Similarity=0.284 Sum_probs=84.3
Q ss_pred ccCCCCCcEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCC
Q 007949 337 DHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK 416 (583)
Q Consensus 337 ~~~~~~~Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~ 416 (583)
+.++.+|||++.++|+.|+|||.+|+++|+||++ . ...|.++++++++|+.+++|+|||.+
T Consensus 25 r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---~---------------~~~i~l~~v~~~~f~~ll~fiYtg~~- 85 (119)
T 3m5b_A 25 RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---R---------------GQWALGEGISPSTFAQLLNFVYGESV- 85 (119)
T ss_dssp HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---C---------------EEEECCSSCCHHHHHHHHHHHTTCCE-
T ss_pred HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---C---------------CCEEEeCCCCHHHHHHHHHHHcCCCc-
Confidence 4568999999999999999999999999999974 1 14689999999999999999999999
Q ss_pred CCCHHhHHHHHHHHhccCchHHHHHHHHHHHh
Q 007949 417 DIDPDQAEEMFDAASRYLLFPLKRAVADVLLL 448 (583)
Q Consensus 417 ~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 448 (583)
.++.+++.+++.+|++|+++.|++.|++++.+
T Consensus 86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 89999999999999999999999999998764
No 48
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.71 E-value=2.3e-17 Score=141.80 Aligned_cols=103 Identities=21% Similarity=0.143 Sum_probs=97.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~ 113 (583)
||+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.++++
T Consensus 11 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~ 90 (123)
T 3aaa_C 11 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVK 90 (123)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 577777 899999
Q ss_pred HHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 114 LLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 114 ~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
+|+++|++++. ++..|.||+|+|+..
T Consensus 91 ~Ll~~ga~~~~--~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 91 LLLSKGADKTV--KGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHTTCCTTC--CCTTSCCHHHHCCCH
T ss_pred HHHHcCCCCCC--cCCCCCCHHHHhCCH
Confidence 99999999887 789999999999743
No 49
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.71 E-value=1.5e-17 Score=145.33 Aligned_cols=98 Identities=17% Similarity=0.227 Sum_probs=82.4
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||+
T Consensus 15 ~l~~l~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~ 84 (135)
T 2yy9_A 15 ELNKQREKGQYC------DATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGH 84 (135)
T ss_dssp HHHHHHHTTTTC------CEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCc------ceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCC
Confidence 334455555555 999999999999999999999999999999876 4568889999999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
+.++.+++.+++.+|+.++++.|.+.+.
T Consensus 85 ~~i~~~~v~~ll~~A~~l~i~~L~~~C~ 112 (135)
T 2yy9_A 85 LALTSGNRDQVLLAAKELRVPEAVELCQ 112 (135)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 9999999999999999887777766665
No 50
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.71 E-value=4.7e-17 Score=142.59 Aligned_cols=107 Identities=28% Similarity=0.401 Sum_probs=100.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHH
Q 007949 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i 111 (583)
++||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.++
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 95 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 3489999999999999999999999999999999999999999999999999999999999999998 577777 8999
Q ss_pred HHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 112 RKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 112 ~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|+++|++++. .+..|.||||+|+..++
T Consensus 96 v~~Ll~~g~~~~~--~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 96 AEVLLKHGADVNA--QDKFGKTAFDISIGNGN 125 (136)
T ss_dssp HHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHcCCCCcC--cCCCCCCHHHHHHHCCC
Confidence 9999999999877 68899999999998776
No 51
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.70 E-value=2.6e-17 Score=144.56 Aligned_cols=100 Identities=17% Similarity=0.335 Sum_probs=84.4
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcC-CCCHHHHHHHhhhhcCC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE-KLSYPALYGLIHFFYSD 232 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~-~v~~~~~~~lL~ylYtg 232 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.+. ..|.++ ++++++|+.+|+|+|||
T Consensus 26 ~l~~l~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg 97 (138)
T 2z8h_A 26 SLNDQRKKDVLC------DVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTA 97 (138)
T ss_dssp HHHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHS
T ss_pred HHHHHHhhCCCc------CeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCC
Confidence 444555565555 999999999999999999999999999999988764 467774 89999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
.+.++.+++.+++.+|+.++++.|.+.+.
T Consensus 98 ~~~i~~~~v~~ll~~A~~~~i~~L~~~C~ 126 (138)
T 2z8h_A 98 KLILSKDNVDEVCRCVEFLSVHNIEESCF 126 (138)
T ss_dssp CCCCCTTTHHHHHHHHHHHTCGGGHHHHH
T ss_pred CcccCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999888776666555443
No 52
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.70 E-value=6.5e-17 Score=155.17 Aligned_cols=127 Identities=14% Similarity=0.107 Sum_probs=113.9
Q ss_pred cchhhhcc--cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCC-----CccCCCChhHHHHHHHhCCH
Q 007949 7 STIDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNV-----NARDQWDSVALYYACLAGHL 79 (583)
Q Consensus 7 ~~~~~~~~--~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~d~~g~t~L~~A~~~g~~ 79 (583)
.++...+. |+++|.+|..|+|| ||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 88 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMGETA--------LHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNV 88 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCH
Confidence 34455554 89999999999999 89999999999999999999886 67788999999999999999
Q ss_pred HHHHHHHhcCCCcCccCC-------------CCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 80 DAARMLLESGAICSEHTF-------------DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 80 ~~v~~Ll~~ga~~~~~~~-------------~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++++|+++|++++..+. .|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 89 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 89 NLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA--QDSLGNTVLHILILQPN 166 (232)
T ss_dssp HHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHTCSC
T ss_pred HHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 999999999999998765 6888 577777 89999999999999888 78999999999998776
No 53
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.70 E-value=9.3e-18 Score=155.55 Aligned_cols=119 Identities=10% Similarity=0.082 Sum_probs=105.2
Q ss_pred CCCCCCC-CCCCCCCCCCCcHHHHHHHHcCCH----HHHHHHHHcCCCCCccCCCChhHHHHHHHhCC------HHHHHH
Q 007949 16 IDLDASD-FSSSVPLKKVPNGDVFEASRAGDV----DRLRYILESGVNVNARDQWDSVALYYACLAGH------LDAARM 84 (583)
Q Consensus 16 ~din~~d-~~g~tpl~~~~~~~L~~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~------~~~v~~ 84 (583)
.+++.++ ..|+|| ||+|+..|+. +++++|+++|+++|.+|..|+||||+|+..|+ .+++++
T Consensus 28 ~~~~~~~~~~g~T~--------Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~ 99 (186)
T 3t8k_A 28 KGYEDKESVLKSNI--------LYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKI 99 (186)
T ss_dssp HSSSCHHHHHTTTH--------HHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCcccccccCCCCH--------HHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHH
Confidence 3456666 779999 8999999985 58999999999999999999999999999997 578999
Q ss_pred HHhcCCCcCccCCCCc-hH-HHHHh-------hHHHHHHHHh-CCCCCCCCCCcccCCccchhccccccc
Q 007949 85 LLESGAICSEHTFDGD-RC-HYAAL-------NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQ 144 (583)
Q Consensus 85 Ll~~ga~~~~~~~~g~-t~-~~aa~-------~~~i~~~L~~-~~~~~~~~~~~~~~~t~L~~A~~~~~~ 144 (583)
|+++|++++.+|..|. || |+++. +.+++++|++ +|++++. ++..|.||||+|+..++.
T Consensus 100 Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~--~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 100 FLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI--KDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp HHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC--CCTTSCCHHHHHHTTTCH
T ss_pred HHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc--cCCCCCCHHHHHHHcCCH
Confidence 9999999999999999 75 66665 3568999999 9999988 799999999999988873
No 54
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.69 E-value=1.2e-17 Score=144.11 Aligned_cols=98 Identities=17% Similarity=0.363 Sum_probs=85.5
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCC-CCHHHHHHHhhhhcCC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREK-LSYPALYGLIHFFYSD 232 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~-v~~~~~~~lL~ylYtg 232 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+|||
T Consensus 22 ~l~~l~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 22 GLNDQRKKDILC------DVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp HHHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred HHHHHHhcCCcc------ceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 344555555555 99999999999999999999999999999998877 56778888 9999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHH
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRI 259 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~ 259 (583)
++.++.+++.+++.+|+.++++.|.+.
T Consensus 94 ~~~~~~~~v~~ll~~A~~l~i~~L~~~ 120 (125)
T 3ohu_A 94 KLLLSRENIREVIRCAEFLRMHNLEDS 120 (125)
T ss_dssp EEEECTTTHHHHHHHHHHHTBSSCTTS
T ss_pred ceEECHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999887766543
No 55
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.69 E-value=8.3e-17 Score=136.60 Aligned_cols=93 Identities=20% Similarity=0.360 Sum_probs=82.1
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcc
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRL 234 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~ 234 (583)
+..+..++.++ ||++.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||++
T Consensus 22 l~~~~~~~~~~------Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 22 LNEQRGHGLFC------DVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHHHHTTTC------CEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCC
T ss_pred HHHHHhcCCce------eEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCc
Confidence 33455555554 99999999999999999999999999999875 45788899999999999999999999
Q ss_pred -cCChhhHHHHHHHHhHhchHHHHH
Q 007949 235 -EIAVDDMEDLVKICKVCKCESLQR 258 (583)
Q Consensus 235 -~i~~~~~~~ll~~a~~~~~~~l~~ 258 (583)
.++.+++.+++.+|+.++++.|++
T Consensus 91 ~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 VRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCccccCc
Confidence 799999999999999998888764
No 56
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=157.02 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=62.3
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 59 g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (261)
T 2xai_A 59 GAQVNGVTADWHTP--------LFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDH 129 (261)
T ss_dssp TCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 67777777777777 45555555555555555555554432 2355555555555555555555555555555
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+..|.| +|+|+. +.+++++|+++|++++. +..|.||||.|+..++
T Consensus 130 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 130 KISHLGTPLYLACENQQRACVKKLLESGADVNQ---GKGQDSPLHAVARTAS 178 (261)
T ss_dssp CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC---CBTTBCHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC---CCCCCChHHHHHHcCC
Confidence 5555554 344433 44555555555554442 3444555555554444
No 57
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.69 E-value=7.3e-17 Score=157.28 Aligned_cols=105 Identities=22% Similarity=0.143 Sum_probs=76.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~ 113 (583)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.++++
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 67777777777777777777777777777777777777777777777777777777777777777 355555 677777
Q ss_pred HHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 114 LLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 114 ~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+++|++++. ++..|.||+++|+..++
T Consensus 208 ~Ll~~ga~~~~--~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 208 VLLDHFANRDI--TDHMDRLPRDIAQERMH 235 (253)
T ss_dssp HHHHTTCCTTC--CCTTCCCHHHHHHHTTC
T ss_pred HHHHcCCCccc--cccCCCCHHHHHHHcCC
Confidence 77777777666 56677777777777666
No 58
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.69 E-value=1.7e-16 Score=152.76 Aligned_cols=119 Identities=20% Similarity=0.202 Sum_probs=78.4
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCChhHHHHHHHhCCHHHHHHHHhc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN------VNARDQWDSVALYYACLAGHLDAARMLLES 88 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 88 (583)
|++++.+|..|+|| ||+|+..|+.+++++|++.|++ ++..+..|+||||+|+..|+.+++++|+++
T Consensus 68 g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 139 (236)
T 1ikn_D 68 GCDPELRDFRGNTP--------LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL 139 (236)
T ss_dssp CCCSCCCCTTCCCH--------HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45555555555555 6777777777777777766654 355566677777777777777777777777
Q ss_pred CCCcCccCC-CCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 89 GAICSEHTF-DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 89 ga~~~~~~~-~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|++++..+. .|.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 140 g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 140 GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR--VTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC--CCTTCCCGGGGCTTSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--ccCCCCCHHHHHHccCc
Confidence 777776665 6666 455555 66777777777776665 56667777777776555
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.69 E-value=4.2e-17 Score=151.79 Aligned_cols=118 Identities=17% Similarity=0.162 Sum_probs=110.2
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
..+|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 26 ~~~n~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 97 (192)
T 2rfm_A 26 FLRNYRDSYNRTP--------LMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK 97 (192)
T ss_dssp HHHTCCCTTCCCH--------HHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred HHHhCcCCCCCCH--------HHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 4468899999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 96 ~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+||..++
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVND--RNLEGETPLIVASKYGR 146 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC--CCTTCCCHHHHHHHHTC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 999998 577777 89999999999999887 78899999999998776
No 60
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.68 E-value=3.3e-17 Score=139.90 Aligned_cols=98 Identities=17% Similarity=0.332 Sum_probs=84.7
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcc
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRL 234 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~ 234 (583)
+..+..++.++ ||++.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.+
T Consensus 18 l~~l~~~~~~~------Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~ 86 (119)
T 2q81_A 18 LNQQRQLGLLC------DCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFMYTAKL 86 (119)
T ss_dssp HHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHhcCCCc------ceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHHcCCCC
Confidence 33455555555 99999999999999999999999999999863 23466788999999999999999999
Q ss_pred cCChhhHHHHHHHHhHhchHHHHHHHHHH
Q 007949 235 EIAVDDMEDLVKICKVCKCESLQRIIEKE 263 (583)
Q Consensus 235 ~i~~~~~~~ll~~a~~~~~~~l~~~l~~~ 263 (583)
.++.+++.+++.+|+.++++.|.+.+...
T Consensus 87 ~i~~~~~~~ll~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 87 SLSPENVDDVLAVATFLQMQDIITACHAL 115 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999998888887653
No 61
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.68 E-value=1.4e-16 Score=152.68 Aligned_cols=125 Identities=27% Similarity=0.320 Sum_probs=93.7
Q ss_pred hhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHh
Q 007949 9 IDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 9 ~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
+...++ |++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 56 v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 127 (231)
T 3aji_A 56 VEFLLQLGVPVNDKDDAGWSP--------LHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127 (231)
T ss_dssp HHHHHHTTCCSCCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCCCCCH--------HHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 333443 67777777777777 688888888888888888887777777778888888888888888888888
Q ss_pred cCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 88 SGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 88 ~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|++++..+..|.| +|+++. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 128 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 128 GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI--QDTEGNTPLHLACDEER 184 (231)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc--cCCCCCCHHHHHHHCCC
Confidence 88887777777777 466665 67777888887777766 56777788888876665
No 62
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.68 E-value=1.2e-17 Score=143.71 Aligned_cols=100 Identities=18% Similarity=0.362 Sum_probs=83.8
Q ss_pred cccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEc-CCCCHHHHHHHhhhhcCC
Q 007949 154 GISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR-EKLSYPALYGLIHFFYSD 232 (583)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l-~~v~~~~~~~lL~ylYtg 232 (583)
.+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.+++.++ ..+.+ .++++++|+.+|+|+|||
T Consensus 19 ~l~~l~~~~~~~------Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg 90 (124)
T 2ihc_A 19 SLNDQRKKDVLC------DVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTA 90 (124)
T ss_dssp HHHHHHHHTCSC------CEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCc------CEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCC
Confidence 344555555555 999999999999999999999999999999988765 45777 489999999999999999
Q ss_pred cccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 233 RLEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 233 ~~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
.+.++.+++.+++.+|+.++++.|.+.+.
T Consensus 91 ~~~i~~~~v~~ll~~A~~~~~~~L~~~C~ 119 (124)
T 2ihc_A 91 KLILSKENVDEVCKCVEFLSVHNIEESCF 119 (124)
T ss_dssp EEEEETTTHHHHHHHHHHHTBSSCCGGGG
T ss_pred CcccCHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999998777665543
No 63
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.68 E-value=2e-16 Score=148.09 Aligned_cols=126 Identities=16% Similarity=0.189 Sum_probs=112.0
Q ss_pred chhhhcc--cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~--~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.+...+. +.++|..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 20 ~v~~ll~~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 91 (201)
T 3hra_A 20 KVKEILQDTTYQVDEVDTEGNTP--------LNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYM 91 (201)
T ss_dssp HHHHHHTCTTCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444443 45899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred H-hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCC-CCCCCCCCcccCCccchhcccccc
Q 007949 86 L-ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYE-ARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l-~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~-~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+ ..+++++..+..|.| +|+++. +.+++++|++.| .+++. ++..|.||||.|+..+.
T Consensus 92 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF--QNDFGYTALIEAVGLRE 152 (201)
T ss_dssp HHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC--CCTTSCCHHHHHHHSSC
T ss_pred HhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC--CCCCCCCHHHHHHHhcc
Confidence 9 567899999999998 677777 899999999999 77777 68899999999997665
No 64
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.68 E-value=2e-16 Score=135.85 Aligned_cols=110 Identities=29% Similarity=0.409 Sum_probs=102.3
Q ss_pred CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-H
Q 007949 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-C 102 (583)
Q Consensus 24 ~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~ 102 (583)
+|+|| ||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.| +
T Consensus 1 ~g~t~--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 72 (126)
T 1n0r_A 1 NGRTP--------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (126)
T ss_dssp CCCCH--------HHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccH--------HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHH
Confidence 47788 89999999999999999999999999999999999999999999999999999999999999998 5
Q ss_pred HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 103 HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 103 ~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+++. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAGADVNA--KDKNGRTPLHLAARNGH 113 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHcChHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCc
Confidence 77776 89999999999999887 68899999999998766
No 65
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.68 E-value=1.4e-16 Score=152.67 Aligned_cols=126 Identities=21% Similarity=0.215 Sum_probs=115.3
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |++++.+|..|+|| ||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 88 IVKALLVKGAHVNAVNQNGCTP--------LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3444444 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++|++++.++..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+.+++
T Consensus 160 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 160 FYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI--ENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHSCHHHH
T ss_pred hcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHhhHH
Confidence 999999999999999 577776 89999999999999887 78999999999987665
No 66
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.67 E-value=3e-16 Score=149.91 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=77.0
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC-CCcCc
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICSE 94 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 94 (583)
.+++..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.
T Consensus 98 ~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 98 PDLNKITNQGVTC--------LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp CCTTCCCTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC
T ss_pred cccccCCcCCCCH--------HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC
Confidence 5666666666666 56677777777777777767666666666777777777777777777777666 66666
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHH-hCCCCCCCCCCcccCCccchhccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLK-AYEARPPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~-~~~~~~~~~~~~~~~~t~L~~A~~ 140 (583)
.|..|.| +|+|+. +.+++++|+ ++|++++. ++..|.||+++|+.
T Consensus 170 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~--~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 170 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL--VDNKGAKAEDVALN 217 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC--BCTTSCBGGGGCSS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc--cCCCCCcHHHHHHH
Confidence 6666666 355554 666666666 66666665 56666677776654
No 67
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.67 E-value=3.7e-17 Score=146.86 Aligned_cols=115 Identities=23% Similarity=0.096 Sum_probs=102.4
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 97 (583)
.+..+..|.|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++..+.
T Consensus 5 ~~~~~~~~~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~ 75 (156)
T 1bi7_B 5 AGSSMEPSADW--------LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP 75 (156)
T ss_dssp -----CCSTTH--------HHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT
T ss_pred ccCCCccchHH--------HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC
Confidence 34567788999 89999999999999999999999999999999999996 9999999999999999999999
Q ss_pred CCch-H-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 98 DGDR-C-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 98 ~g~t-~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.|.| | |+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV--RDAWGRLPVDLAEELGH 123 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC--CCTTCCCHHHHHHHHTC
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHhCH
Confidence 9997 6 66666 89999999999999887 78899999999998776
No 68
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.67 E-value=2.6e-16 Score=151.38 Aligned_cols=118 Identities=20% Similarity=0.276 Sum_probs=85.7
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
.+++..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 102 ~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 173 (237)
T 3b7b_A 102 MDVNCQDDGGWTP--------MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173 (237)
T ss_dssp CCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCC
T ss_pred CCcccCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc
Confidence 4555566666666 67777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 96 ~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 174 ~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~--~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 174 NIHGDSPLHIAARENRYDCVVLFLSRDSDVTL--KNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--CCTTSCCHHHHSCTTCH
T ss_pred CCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc--cCCCCCCHHHHHHHHHH
Confidence 777777 455555 67777777777777666 56777777777776665
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.67 E-value=2.9e-16 Score=156.73 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=114.0
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------------------
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ---------------------- 64 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~---------------------- 64 (583)
++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++..|.
T Consensus 88 ~v~~Ll~~ga~~~~~~~~g~tp--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 88 MVKFLVENGANINQPDNEGWIP--------LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcH--------HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 3444444 77788888888888 8999999999999999999998876653
Q ss_pred --------------------------------------CChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHH
Q 007949 65 --------------------------------------WDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYA 105 (583)
Q Consensus 65 --------------------------------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~a 105 (583)
.|.||||+|+..|+.+++++|+++|++++..|..|.| +|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A 239 (299)
T 1s70_B 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAA 239 (299)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred hhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 4678899999999999999999999999999999999 5777
Q ss_pred Hh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccccchhhh
Q 007949 106 AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAE 150 (583)
Q Consensus 106 a~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~ 150 (583)
+. +.+++++|+++|++++. ++..|.|||++|+++...++....
T Consensus 240 ~~~~~~~~v~~Ll~~gad~~~--~d~~g~t~l~~A~~~~~~~l~~l~ 284 (299)
T 1s70_B 240 AHWGKEEACRILVENLCDMEA--VNKVGQTAFDVADEDILGYLEELQ 284 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC--CCTTSCCTTTSCCSGGGHHHHHHH
T ss_pred HhcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHHHHHHHHHHH
Confidence 77 89999999999999888 789999999999987776665533
No 70
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.67 E-value=2.2e-16 Score=157.59 Aligned_cols=126 Identities=22% Similarity=0.249 Sum_probs=110.2
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...+. |+++|..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 55 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 126 (299)
T 1s70_B 55 EVLRLLERGADINYANVDGLTA--------LHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI 126 (299)
T ss_dssp HHHHHHHHCCCTTCBCTTCCBH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHcCCCCcccCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3445555 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCc------------------------------------------------------------h-HHHH
Q 007949 87 ESGAICSEHTFDGD------------------------------------------------------------R-CHYA 105 (583)
Q Consensus 87 ~~ga~~~~~~~~g~------------------------------------------------------------t-~~~a 105 (583)
++|++++..+..|. | +|+|
T Consensus 127 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A 206 (299)
T 1s70_B 127 SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206 (299)
T ss_dssp HTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHH
T ss_pred hCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHH
Confidence 99999987765544 4 3555
Q ss_pred Hh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 106 AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 106 a~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 207 ~~~g~~~~v~~Ll~~g~d~~~--~d~~g~tpL~~A~~~~~ 244 (299)
T 1s70_B 207 AAKGYTEVLKLLIQARYDVNI--KDYDGWTPLHAAAHWGK 244 (299)
T ss_dssp HHHTCHHHHHHHHTTTCCTTC--CCTTCCCHHHHHHHTTC
T ss_pred HHCCcHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHhcCC
Confidence 55 67889999999988877 68889999999998777
No 71
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.67 E-value=2.3e-16 Score=147.73 Aligned_cols=126 Identities=21% Similarity=0.209 Sum_probs=114.0
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
++...++ |++++.+|..|+|| ||+|+..|+.+++++|++ .+++++..|..|.||||+|+..|+.+++++|
T Consensus 54 ~v~~Ll~~g~~~~~~~~~g~t~--------l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 125 (201)
T 3hra_A 54 IAKALIDRGADINLQNSISDSP--------YLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125 (201)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHH
Confidence 3444555 89999999999999 899999999999999994 6789999999999999999999999999999
Q ss_pred HhcC-CCcCccCCCCch-HHHHHh--h-----HHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESG-AICSEHTFDGDR-CHYAAL--N-----LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~g-a~~~~~~~~g~t-~~~aa~--~-----~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++| ++++..+..|.| +|+++. + .+++++|+++|++++. ++..|.||||+|+..++
T Consensus 126 l~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI--KDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTC
T ss_pred HHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc--cCCCCCCHHHHHHHcCC
Confidence 9999 999999999999 577775 3 8999999999999888 78899999999998776
No 72
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.66 E-value=1.8e-16 Score=154.44 Aligned_cols=119 Identities=18% Similarity=0.139 Sum_probs=75.5
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
|+++|.+|..|+|| ||+|+..|+.+++++|+++|+ +++..+..|+||||+|+..|+.+++++|+++|++++
T Consensus 80 g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (253)
T 1yyh_A 80 SADANIQDNMGRTP--------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 151 (253)
T ss_dssp TCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT
T ss_pred CCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 55555555556666 566666666666666666554 566666666666666666666666666666666666
Q ss_pred ccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM--QNNREETPLFLAAREGS 202 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHCCC
Confidence 66666666 355555 56666666666666655 45666677777665554
No 73
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.66 E-value=2.7e-16 Score=155.22 Aligned_cols=119 Identities=21% Similarity=0.276 Sum_probs=97.7
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ-WDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
+.+++.+|..|+|| ||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++
T Consensus 148 ~~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 148 RLQLEAENYDGHTP--------LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGGTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhcCCCcCCCCcCH--------HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 67799999999999 8999999999999999999999999985 49999999999999999999999999999
Q ss_pred ccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.++..|.| +|+|+. +.+++++|+++|++++. ++..|.||++.|...+.
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPE--DGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCC--CC---------------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCc--CCCcccccccccCCccc
Confidence 99999999 577776 89999999999999888 79999999999986554
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.66 E-value=2.3e-16 Score=151.34 Aligned_cols=122 Identities=12% Similarity=0.011 Sum_probs=103.0
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|++++..+..+.++ .++||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 8 ~~~~~~~~~~~~~~-----~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~ 82 (229)
T 2vge_A 8 AGSPRKARRARLNP-----LVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS 82 (229)
T ss_dssp --CCCCCCCTTSCH-----HHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCccccccccch-----hHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 56666555555444 2448999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCc-ccCCccchhc--ccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL-QAALRDTFLG--CGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~-~~~~t~L~~A--~~~~~ 143 (583)
.|..|.| +|+|+. +.+++++|++.|++++. .+ ..|.||||+| +..++
T Consensus 83 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~--~~~~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 83 PDSHGWTPLHCAASCNDTVICMALVQHGAAIFA--TTLSDGATAFEKCDPYREGY 135 (229)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--CCSSTTCCTGGGCCTTSTTH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--ccCCCCCCHHHHHHHHhcCh
Confidence 9999998 577777 89999999999998877 44 6899999999 66555
No 75
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.66 E-value=3.8e-16 Score=150.44 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=81.9
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
+++..|..|+|| ||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..
T Consensus 108 ~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 179 (241)
T 1k1a_A 108 DLEARNYDGLTA--------LHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQ 179 (241)
T ss_dssp CTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCB
T ss_pred cccccCcCCCcH--------HHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 555555566666 677777777777777777777777766 66777777777777777777777777777777
Q ss_pred CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 96 ~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..++
T Consensus 180 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 180 MYSGSSALHSASGRGLLPLVRTLVRSGADSSL--KNCHNDTPLMVARSRRV 228 (241)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCTTTTCSSHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--cCCCCCCHHHHHHhcCc
Confidence 777776 455555 67777777777777665 56677777777776544
No 76
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=3.7e-16 Score=127.10 Aligned_cols=90 Identities=34% Similarity=0.513 Sum_probs=83.1
Q ss_pred CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-H
Q 007949 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-C 102 (583)
Q Consensus 24 ~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~ 102 (583)
+|+|| ||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.| +
T Consensus 1 ~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l 72 (93)
T 1n0q_A 1 NGRTP--------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (93)
T ss_dssp --CCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcH--------HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 37788 89999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred HHHHh--hHHHHHHHHhCCCC
Q 007949 103 HYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 103 ~~aa~--~~~i~~~L~~~~~~ 121 (583)
|+++. +.+++++|+++|++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 73 HLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 77776 89999999998874
No 77
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.66 E-value=9.7e-17 Score=136.55 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=79.2
Q ss_pred CCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhhHHHHHHH
Q 007949 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (583)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (583)
+.+|||+|.++|+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||++.++.+++.+++.+
T Consensus 28 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ll~a 98 (119)
T 3m5b_A 28 PALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEA 98 (119)
T ss_dssp TTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHHHHHHH
T ss_pred CCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHH
Confidence 4466999999999999999999999999984 2456889999999999999999999999999999999999
Q ss_pred HhHhchHHHHHHHHHH
Q 007949 248 CKVCKCESLQRIIEKE 263 (583)
Q Consensus 248 a~~~~~~~l~~~l~~~ 263 (583)
|+.++++.|.+.|++.
T Consensus 99 A~~l~i~~l~~~C~~~ 114 (119)
T 3m5b_A 99 ARALGVQSLEEACWRA 114 (119)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHH
Confidence 9999999998888754
No 78
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=153.20 Aligned_cols=166 Identities=20% Similarity=0.290 Sum_probs=131.9
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 18 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 18 SLRNLISQGWAVNIITADHVSP--------LHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444444 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc-cchhhhhhhcccccccCC
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ-FLEEAEVVLGISGVTSNG 162 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~-~l~~~~~~~~~~~l~~~~ 162 (583)
++|++++..+ .|.| +|+++. +.+++++|+++|++++. .+..|.||||.||..++. .++. |+..+
T Consensus 90 ~~g~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~---------Ll~~g 157 (261)
T 2xai_A 90 QHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQRACVKK---------LLESG 157 (261)
T ss_dssp HTTCCSSCSC-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTCHHHHHH---------HHHHT
T ss_pred HCCCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--CCCCCCCHHHHHHHhCCHHHHHH---------HHHcC
Confidence 9999998654 5777 677777 89999999999999887 788999999999987762 1111 11111
Q ss_pred CCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 163 ASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 163 ~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
. |+.. ......+.|.++...+....+-++..
T Consensus 158 ~--------~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 158 A--------DVNQ-GKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp C--------CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred C--------CCCC-CCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 1 1111 12345678888877777767766654
No 79
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.66 E-value=2.9e-16 Score=150.62 Aligned_cols=117 Identities=23% Similarity=0.291 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCC-------------CChhHHHHHHHhCCHHHHHHH
Q 007949 19 DASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ-------------WDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 19 n~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-------------~g~t~L~~A~~~g~~~~v~~L 85 (583)
+..|..|+|| ||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|
T Consensus 69 ~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 69 TSELYEGQTA--------LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp CSTTTTTCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred cccCCCCcCH--------HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 7888899999 8999999999999999999999998875 799999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHH----HHHHhCCCCCCC----CCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVR----KLLKAYEARPPP----LGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~----~~L~~~~~~~~~----~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..|..|.| +|+|+. +.+++ ++|+++|++... ..++..|.||||+|+..++
T Consensus 141 l~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 141 IEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 9999999999999999 577777 66665 999999998741 1267899999999998877
No 80
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.66 E-value=4e-16 Score=148.55 Aligned_cols=105 Identities=22% Similarity=0.143 Sum_probs=51.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~ 113 (583)
||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.++++
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555544 233333 444555
Q ss_pred HHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 114 LLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 114 ~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+++|++++. ++..|.||+++|+..++
T Consensus 176 ~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 176 VLLDHFANRDI--TDHMDRLPRDIAQERMH 203 (223)
T ss_dssp HHHHTTCCTTC--CCTTCCCHHHHHHHTTC
T ss_pred HHHHcCCCCcc--ccccCCCHHHHHHHhcc
Confidence 55555544444 34445555555554443
No 81
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.66 E-value=4.5e-17 Score=141.29 Aligned_cols=97 Identities=22% Similarity=0.348 Sum_probs=83.3
Q ss_pred ccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcC-CCCHHHHHHHhhhhcCCc
Q 007949 155 ISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE-KLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 155 ~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~-~v~~~~~~~lL~ylYtg~ 233 (583)
+..+..++.++ ||+|.++|+.|+|||.||+++|+||++||.++ ....|.++ ++++++|+.+|+|+|||.
T Consensus 24 l~~l~~~~~~~------Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 24 LNEQRLQGLYC------DVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp HHHHHHTTCSC------CEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred HHHHHhcCCCc------ceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 33455555555 99999999999999999999999999999876 45678886 899999999999999999
Q ss_pred ccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 234 LEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 234 ~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
+.++.+++.+++.+|+.++++.|.+.+.
T Consensus 94 ~~i~~~~~~~ll~~A~~~~i~~l~~~C~ 121 (129)
T 3ga1_A 94 LSMNVGDQDLLMYTAGFLQIQEIMEKGT 121 (129)
T ss_dssp EECCTTTHHHHHHHHHHTTBTTSSCC--
T ss_pred cccCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999988777766554
No 82
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.66 E-value=4e-16 Score=148.62 Aligned_cols=119 Identities=18% Similarity=0.139 Sum_probs=70.8
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 93 (583)
|++++.+|..|+|| ||+|+..|+.+++++|+++++ +++..+..|+||||+|+..|+.+++++|+++|++++
T Consensus 48 g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 119 (223)
T 2f8y_A 48 SADANIQDNMGRTP--------LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 119 (223)
T ss_dssp TCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc
Confidence 45555555555555 566666666666666666554 555556666666666666666666666666666666
Q ss_pred ccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..+..|.| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM--QNNREETPLFLAAREGS 170 (223)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHHTC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCcCHHHHHHHcCC
Confidence 66666665 344444 56666666666665555 45566666666665444
No 83
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.66 E-value=1.6e-16 Score=153.46 Aligned_cols=126 Identities=18% Similarity=0.129 Sum_probs=99.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |++++.. ..|.|| ||+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|
T Consensus 19 ~~~~~ll~~g~~~~~~-~~~~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 89 (239)
T 1ycs_B 19 KTGSERIAHGMRVKFN-PLPLAL--------LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL 89 (239)
T ss_dssp -------------------CHHH--------HHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHhccCCCcccC-chhhHH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 45566666 7788753 567788 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCC-ccchhc--ccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAAL-RDTFLG--CGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~-t~L~~A--~~~~~ 143 (583)
+++|++++..|..|.| +|+|+. +.+++++|+++|++++. .+..|. ||||+| +..++
T Consensus 90 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 90 VQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA--MTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCSSSCCCHHHHCCSSSTTC
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce--ecCCCCcchHHHHHHhhhcc
Confidence 9999999999999999 577777 89999999999999887 565555 999999 55555
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.66 E-value=1e-16 Score=143.98 Aligned_cols=120 Identities=18% Similarity=0.136 Sum_probs=94.9
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChh-HHHHHHHhCCHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSV-ALYYACLAGHLDAARM 84 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-~L~~A~~~g~~~~v~~ 84 (583)
.++...+. |+++|.+|..|+|| ||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|+.+++++
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~ 96 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNSYGRRP--------IQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVV 96 (156)
T ss_dssp HHHHHHHTTTCCTTCCCSSSCCT--------TTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCH--------HHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHH
Confidence 34445555 89999999999999 68885 89999999999999999999999999 9999999999999999
Q ss_pred HHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchh
Q 007949 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFL 137 (583)
Q Consensus 85 Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~ 137 (583)
|+++|++++.+|..|.| +|+|+. +.+++++|+++|++++. ++..|.||.+.
T Consensus 97 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~~~~ 150 (156)
T 1bi7_B 97 LHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG--SNHARIDAAEG 150 (156)
T ss_dssp HHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc--cCcCcCccccc
Confidence 99999999999999999 577776 89999999999999888 68888888764
No 85
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.66 E-value=1.1e-16 Score=156.28 Aligned_cols=113 Identities=17% Similarity=0.155 Sum_probs=103.3
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-------------ChhHHHHHHHhCCHHHHHHHHh
Q 007949 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQW-------------DSVALYYACLAGHLDAARMLLE 87 (583)
Q Consensus 21 ~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-------------g~t~L~~A~~~g~~~~v~~Ll~ 87 (583)
+|..|+|| ||+|+..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|++
T Consensus 86 ~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 86 EFYQGHSA--------LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp TTTTTCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 44779999 89999999999999999999999999876 9999999999999999999999
Q ss_pred ---cCCCcCccCCCCch-HHHHHh----hHH-------HHHHHHhCCCCC-------CCCCCcccCCccchhcccccc
Q 007949 88 ---SGAICSEHTFDGDR-CHYAAL----NLK-------VRKLLKAYEARP-------PPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 88 ---~ga~~~~~~~~g~t-~~~aa~----~~~-------i~~~L~~~~~~~-------~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|++++.+|..|.| +|+|+. +.+ ++++|+++|+++ +. ++..|.||||+|+..++
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~--~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI--SNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC--CCTTSCCHHHHHHHTTC
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc--cCCCCCCHHHHHHHhCC
Confidence 99999999999999 577775 455 999999999988 55 68899999999998887
No 86
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.65 E-value=2e-16 Score=152.36 Aligned_cols=170 Identities=15% Similarity=0.087 Sum_probs=129.9
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
++++.... ++++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 26 ~Ll~~~~~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 97 (236)
T 1ikn_D 26 EVIRQVKGDLAFLNFQNNLQQTP--------LHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL 97 (236)
T ss_dssp CCCC-----CCCCCCCCTTCCCH--------HHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHhhccHHHhhccCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44444443 56899999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCC------cCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcc-cCCccchhccccccccchhhhhhhcc
Q 007949 86 LESGAI------CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCGANRQFLEEAEVVLGI 155 (583)
Q Consensus 86 l~~ga~------~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~-~~~t~L~~A~~~~~~~l~~~~~~~~~ 155 (583)
+++|++ ++..+..|.| +|+|+. +.+++++|+++|++++. .+. .|.||||+|+..++.-+-+
T Consensus 98 l~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~g~tpL~~A~~~~~~~~v~------- 168 (236)
T 1ikn_D 98 TQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA--QEPCNGRTALHLAVDLQNPDLVS------- 168 (236)
T ss_dssp HHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTTCCCHHHHHHHTTCHHHHH-------
T ss_pred HhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCCHHHHH-------
Confidence 999976 4677888998 577777 89999999999999887 566 8999999999877621111
Q ss_pred cccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 156 SGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 156 ~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
-|+.. ++|+...-.....+.|.++-.......+-++..
T Consensus 169 -~Ll~~--------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 206 (236)
T 1ikn_D 169 -LLLKC--------GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 206 (236)
T ss_dssp -HHHTT--------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTT
T ss_pred -HHHHc--------CCCCCcccCCCCCHHHHHHccCchHHHHHHHHc
Confidence 12111 124444434445567766655555555555543
No 87
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.65 E-value=5.2e-16 Score=140.86 Aligned_cols=110 Identities=16% Similarity=0.121 Sum_probs=102.9
Q ss_pred CCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-H
Q 007949 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-C 102 (583)
Q Consensus 24 ~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~ 102 (583)
.|.|| ||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +
T Consensus 2 ~~~t~--------L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLS--------VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCC--------HHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCcch--------HHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 47788 89999999999999999999999999999999999999999999999999999999999999998 5
Q ss_pred HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 103 HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 103 ~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+++. +.+++++|+++|++++. ++..|.||||.|+..++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 114 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNE--YDWNGGTPLLYAVHGNH 114 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCc--CCCCCCCHHHHHHHcCC
Confidence 77777 89999999999999887 68899999999998776
No 88
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.65 E-value=2.6e-16 Score=155.41 Aligned_cols=126 Identities=15% Similarity=0.089 Sum_probs=110.4
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCC----------------------------
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN---------------------------- 58 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~---------------------------- 58 (583)
++...+. |++++.+|..|+|| ||+|+..|+.+++++|+++|++
T Consensus 60 ~v~~Ll~~ga~~~~~~~~g~tp--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (282)
T 1oy3_D 60 TVEKLYAAGAGVLVAERGGHTA--------LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVD 131 (282)
T ss_dssp HHHHHHHTTCCSSCCCTTSCCH--------HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------
T ss_pred HHHHHHHcCCCCCCCCCCCCCH--------HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhc
Confidence 3344444 78888888888888 8999999999999999987754
Q ss_pred -------------------CCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCC-Cch-HHHHHh--hHHHHHHH
Q 007949 59 -------------------VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD-GDR-CHYAAL--NLKVRKLL 115 (583)
Q Consensus 59 -------------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~t-~~~aa~--~~~i~~~L 115 (583)
++.+|..|+||||+|+..|+.+++++|+++|++++..+.. |.| +|+|+. +.+++++|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 211 (282)
T 1oy3_D 132 SQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELL 211 (282)
T ss_dssp ------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHH
Confidence 6778889999999999999999999999999999998854 888 577777 89999999
Q ss_pred HhCCCCCCCCCCcccCCccchhcccccc
Q 007949 116 KAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 116 ~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++. ++..|.||||+|+..++
T Consensus 212 l~~gad~~~--~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 212 LKAGADPTA--RMYGGRTPLGSALLRPN 237 (282)
T ss_dssp HHTTCCTTC--CCTTSCCHHHHHHTSSC
T ss_pred HHcCCCCcc--cccCCCCHHHHHHHcCC
Confidence 999999888 78999999999998777
No 89
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.65 E-value=4.8e-16 Score=157.58 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=79.3
Q ss_pred hhhcc-cCCCCC-CCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCC---HHHHHH
Q 007949 10 DAELD-EIDLDA-SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH---LDAARM 84 (583)
Q Consensus 10 ~~~~~-~~din~-~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~---~~~v~~ 84 (583)
...++ |+++|. +|..|+|| ||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+ .++++.
T Consensus 114 ~~l~~~g~dvn~~~d~~g~Tp--------Lh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ 185 (327)
T 1sw6_A 114 DAFPNTQLNLNIPVDEHGNTP--------LHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEA 185 (327)
T ss_dssp HHCTTSCCCSCSCCSTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHH
T ss_pred HHHHhcCCCcccccCCCCCcH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHH
Confidence 33444 799999 89999999 899999999999999999999999999999999999999887 566666
Q ss_pred HHhcC-CCcCccCCCCch-HHHHHh------hHHHHHHHHhC
Q 007949 85 LLESG-AICSEHTFDGDR-CHYAAL------NLKVRKLLKAY 118 (583)
Q Consensus 85 Ll~~g-a~~~~~~~~g~t-~~~aa~------~~~i~~~L~~~ 118 (583)
|++.+ ++++..+..|.| +|+|+. +.+++++|++.
T Consensus 186 ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 186 LLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp HHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 66664 566666666666 455553 45555655544
No 90
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.65 E-value=1.5e-16 Score=155.53 Aligned_cols=120 Identities=15% Similarity=0.137 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC--------------CCChhHHHHHHHhCCHHH
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--------------QWDSVALYYACLAGHLDA 81 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~t~L~~A~~~g~~~~ 81 (583)
.+++..|..|+|| ||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.++
T Consensus 84 ~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 155 (260)
T 3jxi_A 84 SPFRDVYYRGQTA--------LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI 155 (260)
T ss_dssp CCBCCSSEESBCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred ccccccccCCCCH--------HHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHH
Confidence 4456667789999 899999999999999999999999998 689999999999999999
Q ss_pred HHHHHh---cCCCcCccCCCCch-HHHHHh--h---------HHHHHHHHhCCCCCCC-----CCCcccCCccchhcccc
Q 007949 82 ARMLLE---SGAICSEHTFDGDR-CHYAAL--N---------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGA 141 (583)
Q Consensus 82 v~~Ll~---~ga~~~~~~~~g~t-~~~aa~--~---------~~i~~~L~~~~~~~~~-----~~~~~~~~t~L~~A~~~ 141 (583)
+++|++ +|++++.+|..|.| +|+|+. + .+++++|+++|++++. ..++..|.||||+|+..
T Consensus 156 v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 999999 99999999999999 578775 2 5899999999998743 22688999999999998
Q ss_pred cc
Q 007949 142 NR 143 (583)
Q Consensus 142 ~~ 143 (583)
++
T Consensus 236 g~ 237 (260)
T 3jxi_A 236 GK 237 (260)
T ss_dssp TC
T ss_pred CC
Confidence 87
No 91
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.65 E-value=1.5e-16 Score=155.09 Aligned_cols=123 Identities=15% Similarity=-0.003 Sum_probs=109.5
Q ss_pred chhhhcc-cCCCCC----CCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCCCc-----------cCCCChh
Q 007949 8 TIDAELD-EIDLDA----SDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNA-----------RDQWDSV 68 (583)
Q Consensus 8 ~~~~~~~-~~din~----~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~-----------~d~~g~t 68 (583)
+++..+. |+++|. +|..|+|| ||+|+.. |+.+++++|++.|++++. +|..|+|
T Consensus 21 ll~~l~~~g~~i~~~~~~~d~~g~t~--------L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t 92 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTEGSTGKTC--------LMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHS 92 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSBTTTTBCH--------HHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCC
T ss_pred HHHHHHHcCCCcccccccCCCCCCCH--------HHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCC
Confidence 4455554 899998 89999999 8999999 999999999999877663 3478999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCcCccCCC-------------Cch-HHHHHh--hHHHHHHHHh---CCCCCCCCCCcc
Q 007949 69 ALYYACLAGHLDAARMLLESGAICSEHTFD-------------GDR-CHYAAL--NLKVRKLLKA---YEARPPPLGPLQ 129 (583)
Q Consensus 69 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-------------g~t-~~~aa~--~~~i~~~L~~---~~~~~~~~~~~~ 129 (583)
|||+|+..|+.+++++|+++|++++..+.. |.| +|+|+. +.+++++|++ +|++++. ++.
T Consensus 93 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~--~d~ 170 (256)
T 2etb_A 93 ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA--TDS 170 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc--cCC
Confidence 999999999999999999999999999886 888 577777 8999999999 8999887 788
Q ss_pred cCCccchhccc
Q 007949 130 AALRDTFLGCG 140 (583)
Q Consensus 130 ~~~t~L~~A~~ 140 (583)
.|.||||+||.
T Consensus 171 ~g~TpLh~A~~ 181 (256)
T 2etb_A 171 LGNTVLHALVM 181 (256)
T ss_dssp TSCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 99999999997
No 92
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.64 E-value=2.3e-16 Score=150.40 Aligned_cols=113 Identities=30% Similarity=0.326 Sum_probs=104.2
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhc-CCCcCccCCCC
Q 007949 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDG 99 (583)
Q Consensus 21 ~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g 99 (583)
.+..|.|| ||+||..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++ |++++..|..|
T Consensus 69 ~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g 140 (222)
T 3ehr_A 69 QAESIDNP--------LHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLG 140 (222)
T ss_dssp HEEEESCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTS
T ss_pred cccccccc--------cccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCC
Confidence 34566778 8999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 100 ~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKGARTDL--RNIEKKLAFDMATNAAC 185 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSCC--CCTTSCCHHHHCCSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcc--ccCCCCCHHHHhcchhH
Confidence 99 577777 89999999999999888 78999999999997555
No 93
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.64 E-value=2e-16 Score=151.73 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=110.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|
T Consensus 35 ~~v~~Ll~~g~~~~~~d~~g~tp--------Lh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~L 106 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQPNEEGITA--------LHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMAL 106 (229)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455555 88999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccC-CCCchH-HHH--Hh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 86 LESGAICSEHT-FDGDRC-HYA--AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 86 l~~ga~~~~~~-~~g~t~-~~a--a~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
+++|++++..+ ..|.|| |+| +. +.+++++|++.|++++. .+..|.||++.++..
T Consensus 107 l~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~--~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 107 VQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL--MNSGAVYALWDYSAE 166 (229)
T ss_dssp HTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT--SGGGEEEESSCBCCS
T ss_pred HHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc--ccCCchHHHHHHhhc
Confidence 99999999986 689985 665 44 89999999999998877 677888888865543
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.64 E-value=1.1e-16 Score=147.98 Aligned_cols=111 Identities=24% Similarity=0.193 Sum_probs=101.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC-CCCc
Q 007949 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT-FDGD 100 (583)
Q Consensus 22 d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~ 100 (583)
+..|+|| ||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.
T Consensus 41 ~~~g~t~--------L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~ 111 (183)
T 3deo_A 41 VSEYETP--------WWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHHH--------HHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSC
T ss_pred CCCCCCH--------HHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 3456677 899999999999999999 99999999999999999999999999999999999999888 8899
Q ss_pred h-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 101 R-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 101 t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
| +|+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELGADIEV--EDERGLTALELAREILK 155 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcCCCCcC--CCCCCCCHHHHHHHhcc
Confidence 8 577777 89999999999999887 78999999999997544
No 95
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.64 E-value=8.9e-16 Score=134.39 Aligned_cols=105 Identities=24% Similarity=0.353 Sum_probs=95.3
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.+++..++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 28 ~~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 99 (136)
T 2jab_A 28 DEVRILMANGADVNAKDEYGLTP--------LYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVL 99 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34445555 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCC
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYE 119 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~ 119 (583)
+++|++++..|..|.| +|+|+. +.+++++|+++|
T Consensus 100 l~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 100 LKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999 566666 899999999875
No 96
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.64 E-value=6.5e-16 Score=153.40 Aligned_cols=118 Identities=21% Similarity=0.302 Sum_probs=78.1
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 82 g~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (285)
T 3d9h_A 82 GWAVNIITADHVSP--------LHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP 153 (285)
T ss_dssp TCCSCEECTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred CCCCCCcCCCCCCH--------HHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC
Confidence 56666666666666 5667777777777777766666666666667777777777777777777766666665
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
.+. |.| +|+|+. +.+++++|+++|++++. ++..|.||||.|+..++
T Consensus 154 ~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 154 ESD-LASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQ 202 (285)
T ss_dssp SCT-TSCHHHHHHHHTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTC
T ss_pred CCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcCc
Confidence 443 555 455555 56677777777666655 56667777777776555
No 97
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.63 E-value=1.1e-15 Score=146.85 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=58.9
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC-CCcC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICS 93 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~ 93 (583)
|++++..|..|+|| ||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++| ++++
T Consensus 34 g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~ 105 (237)
T 3b7b_A 34 GANIDTCSEDQRTP--------LMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 105 (237)
T ss_dssp TCCTTCCCTTCCCH--------HHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT
T ss_pred CCCcCccCCCCCCH--------HHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc
Confidence 45555555555555 45555555555555555555555555555555555555555555555555444 4444
Q ss_pred ccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 94 ~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..+..|.| +|+++. +.+++++|+++|++++. ++..|.||||.|+..++
T Consensus 106 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 106 CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI--RDNEENICLHWAAFSGC 156 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc--cCCCCCCHHHHHHHCCC
Confidence 44444444 233333 44444555544444443 34444445554444333
No 98
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.63 E-value=3.8e-16 Score=136.75 Aligned_cols=105 Identities=20% Similarity=0.146 Sum_probs=95.9
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-ChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQW-DSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~g~~~~v~~L 85 (583)
++...+. |+++|.+|..|+|| ||+|+. |+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|
T Consensus 27 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 97 (136)
T 1d9s_A 27 TVRQLLEAGADPNALNRFGRRP--------IQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVL 97 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTCCTT--------TTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCCcCCcCCCCCCH--------HHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4444554 89999999999999 699999 9999999999999999999999 99999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCC
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~ 121 (583)
+++|++++..|..|.|| |+|+. +.+++++|+++|++
T Consensus 98 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 98 HRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999995 66666 89999999998874
No 99
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.63 E-value=3.7e-16 Score=154.43 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=87.9
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCC-CCCc-----------------------------------
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNA----------------------------------- 61 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~----------------------------------- 61 (583)
+|.+|..|+|| ||+|+..|+.+++++|++.|+ +++.
T Consensus 104 ~n~~d~~g~T~--------Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~ 175 (276)
T 4hbd_A 104 VNIADSNGNTA--------LHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI 175 (276)
T ss_dssp HTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT
T ss_pred CcCCCCCCCCH--------HHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC
Confidence 56666667777 566777777776666666665 4444
Q ss_pred ---cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHh-CCCCCCCCCCcccCCcc
Q 007949 62 ---RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRD 134 (583)
Q Consensus 62 ---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~-~~~~~~~~~~~~~~~t~ 134 (583)
.|..|+||||+|+..|+.+++++|+++|++++.+|..|.| +|+|+. +.+++++|++ .|++++. ++..|.||
T Consensus 176 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--~d~~g~Tp 253 (276)
T 4hbd_A 176 NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL--TDRDGSTA 253 (276)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC--CCTTSCCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC--cCCCCCCH
Confidence 4455778888888888888888888888888888888888 466666 7888888888 7888777 67888888
Q ss_pred chhcccccc
Q 007949 135 TFLGCGANR 143 (583)
Q Consensus 135 L~~A~~~~~ 143 (583)
||+|+..++
T Consensus 254 L~~A~~~g~ 262 (276)
T 4hbd_A 254 LMVALDAGQ 262 (276)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 888887766
No 100
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.63 E-value=2.3e-16 Score=156.70 Aligned_cols=122 Identities=19% Similarity=0.113 Sum_probs=104.0
Q ss_pred hhhcccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC
Q 007949 10 DAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG 89 (583)
Q Consensus 10 ~~~~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 89 (583)
...+...++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+| |+||||+|+..|+.+++++|+++|
T Consensus 16 ~~lL~~~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g 85 (285)
T 3kea_A 16 KSFLSSKDTFKADVHGHSA--------SYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSG 85 (285)
T ss_dssp HHHHHSTTTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred HHHHHhCCCCccCCCCCCH--------HHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCC
Confidence 3344445789999999999 799999999999999999998888874 889999999999999999999999
Q ss_pred CCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccC-Cccchhcccccc
Q 007949 90 AICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGCGANR 143 (583)
Q Consensus 90 a~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~-~t~L~~A~~~~~ 143 (583)
++++..+..|.| +|+|+. +.+++++|+++|++++. .+..| .||||.|+..++
T Consensus 86 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 86 LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF--YGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG--CSSSGGGSHHHHHHHTTC
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc--cCCCCCCCHHHHHHHcCC
Confidence 999999999988 577776 88899999999888776 67777 799999998777
No 101
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.63 E-value=2.4e-16 Score=156.50 Aligned_cols=167 Identities=13% Similarity=0.085 Sum_probs=129.6
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+| |+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 45 ~~v~~Ll~~g~~~~~~~--g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~L 114 (285)
T 3kea_A 45 RLVCTLLNAGALKNLLE--NEFP--------LHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLF 114 (285)
T ss_dssp HHHHHHHHTTGGGSCCT--TCCH--------HHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCC--CCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 45666666 88999884 8999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCC-ch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccccc-chhhhhhhccccccc
Q 007949 86 LESGAICSEHTFDG-DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF-LEEAEVVLGISGVTS 160 (583)
Q Consensus 86 l~~ga~~~~~~~~g-~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~-l~~~~~~~~~~~l~~ 160 (583)
+++|++++..+..| .| +|+|+. +.+++++|+++|++..- ...|.||||.|+..++.- ++- |+.
T Consensus 115 l~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~~~v~~---------Ll~ 182 (285)
T 3kea_A 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD---LAILLSCIHITIKNGHVDMMIL---------LLD 182 (285)
T ss_dssp HHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC---CSTHHHHHHHHHHTTCHHHHHH---------HHH
T ss_pred HhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc---ccCCccHHHHHHHcChHHHHHH---------HHH
Confidence 99999999999999 67 577777 89999999999987622 238999999999888722 111 000
Q ss_pred CCCCCCCCCCCcEEEEECCEeEe-hhHHHHhhccHHHHHhhcCC
Q 007949 161 NGASNSDSFPPDVVFYVQGRPIE-AHRVILSARSVFFRRKFETD 203 (583)
Q Consensus 161 ~~~~~~~~~~~Dv~~~v~~~~~~-~Hk~iL~a~S~~f~~~~~~~ 203 (583)
.+ +|+...-.....| .|-++-..+....+-++..+
T Consensus 183 ~g--------ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 183 YM--------TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp HH--------HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC
T ss_pred cC--------CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Confidence 00 0111111122333 78888777777777777654
No 102
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.63 E-value=6.4e-16 Score=153.47 Aligned_cols=159 Identities=19% Similarity=0.190 Sum_probs=125.9
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCcc
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (583)
..++..|..|+|| ||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 50 ~~~~~~~~~g~t~--------L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 121 (285)
T 3d9h_A 50 NPLMGDAVSDWSP--------MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGV 121 (285)
T ss_dssp CTTCSSSCCSCCH--------HHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCC
T ss_pred CcccCCCccCCCH--------HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC
Confidence 3467889999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccc-cchhhhhhhcccccccCCCCCCCCCCC
Q 007949 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ-FLEEAEVVLGISGVTSNGASNSDSFPP 171 (583)
Q Consensus 96 ~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~~~ 171 (583)
+..|.| +|+|+. +.+++++|+++|+++.. ...|.||||.|+..++. .++. |+..+ .
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~~~v~~---------Ll~~g--------~ 181 (285)
T 3d9h_A 122 TADWHTPLFNACVSGSWDCVNLLLQHGASVQP---ESDLASPIHEAARRGHVECVNS---------LIAYG--------G 181 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC---SCTTSCHHHHHHHHTCHHHHHH---------HHHTT--------C
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCCHHHHHH---------HHHCC--------C
Confidence 999999 577776 89999999999998766 44599999999987762 2211 11111 1
Q ss_pred cEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
|+.........+.|.++.......++.++..
T Consensus 182 ~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 182 NIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 2222223344667777766655555555543
No 103
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.63 E-value=9.2e-16 Score=146.53 Aligned_cols=113 Identities=18% Similarity=0.154 Sum_probs=72.2
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCC
Q 007949 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG--VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (583)
Q Consensus 21 ~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 98 (583)
.|..|+|| ||+|+..|+.+++++|+++| ++++..|..|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 68 ~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 139 (228)
T 2dzn_A 68 PDDSGWTP--------FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF 139 (228)
T ss_dssp CCTTSCCH--------HHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCCCCCCH--------HHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC
Confidence 45555666 56666666666666666665 566666666666666666666666666666666666666666
Q ss_pred Cch-HHHHHh--hHHHHHHHHhCC-CCCCCCCCcccCCccchhcccccc
Q 007949 99 GDR-CHYAAL--NLKVRKLLKAYE-ARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 99 g~t-~~~aa~--~~~i~~~L~~~~-~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|.| +|+|+. +.+++++|++.| ++++. ++..|.||||+|+..++
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNW--QDKQGWTPLFHALAEGH 186 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCC--CCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccC--cCCCCCCHHHHHHHcCC
Confidence 666 355554 566666666666 55554 45666666666665554
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.63 E-value=3.9e-16 Score=156.13 Aligned_cols=118 Identities=16% Similarity=0.200 Sum_probs=100.2
Q ss_pred hhhcc-cCCCCC------CCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCH
Q 007949 10 DAELD-EIDLDA------SDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHL 79 (583)
Q Consensus 10 ~~~~~-~~din~------~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 79 (583)
...+. |+++|. .|..|+|| ||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 168 ~~ll~~g~d~~~~~~~~~~~~~g~t~--------Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~ 239 (301)
T 2b0o_E 168 LEAFANGQDFGQPLPGPDAQAPEELV--------LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQP 239 (301)
T ss_dssp HHHHHTTCCTTSCEECSSSCSCEECH--------HHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHhcCCcccccCCCcccCCCCccH--------HHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 33444 788888 68899999 8999997 899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 80 DAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 80 ~~v~~Ll~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++++|+++|++++..|..|.|| |+|+. +.+++++|+++|++ .|.||||+|+..++
T Consensus 240 ~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 240 DCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC-------
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcCC
Confidence 99999999999999999999995 66666 89999999998875 37899999998776
No 105
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.62 E-value=1.8e-15 Score=137.69 Aligned_cols=109 Identities=27% Similarity=0.325 Sum_probs=101.3
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hH
Q 007949 33 PNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NL 109 (583)
Q Consensus 33 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~ 109 (583)
+.+.|++|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 344599999999999999999999999999999999999999999999999999999999999999998 577777 89
Q ss_pred HHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 110 KVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 110 ~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++++|+++|++++. .+..|.||||.||..++
T Consensus 94 ~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 125 (169)
T 2y1l_E 94 EIVEVLLKNGADVNA--NDMEGHTPLHLAAMFGH 125 (169)
T ss_dssp HHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 999999999999887 68899999999998776
No 106
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.62 E-value=7.2e-16 Score=162.71 Aligned_cols=161 Identities=19% Similarity=0.158 Sum_probs=120.9
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+++|..+..|+|| ||+||..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 4 g~~~~~~~~~g~t~--------L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 75 (437)
T 1n11_A 4 GISGGGGGESGLTP--------LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75 (437)
T ss_dssp -----------CCH--------HHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSC
T ss_pred CCCccccCCCCCCH--------HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 78899999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccccc-chhhhhhhcccccccCCCCCCCCCC
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF-LEEAEVVLGISGVTSNGASNSDSFP 170 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~-l~~~~~~~~~~~l~~~~~~~~~~~~ 170 (583)
++..|.| +|+|+. +.+++++|+++|++++. .+..|.||||.|+..++.- ++. ++..+.
T Consensus 76 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~t~L~~A~~~g~~~~v~~---------Ll~~~~------- 137 (437)
T 1n11_A 76 KAKDDQTPLHCAARIGHTNMVKLLLENNANPNL--ATTAGHTPLHIAAREGHVETVLA---------LLEKEA------- 137 (437)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC--CCTTCCCHHHHHHHHTCHHHHHH---------HHHTTC-------
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC--CCCCCCcHHHHHHHcCCHHHHHH---------HHhCCC-------
Confidence 9999998 577777 89999999999999887 6888999999999887721 111 111111
Q ss_pred CcEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 171 PDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
|+.........+.|.++.......++.++..
T Consensus 138 -~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 138 -SQACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp -CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -CCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 1111112234577877777777777776654
No 107
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.62 E-value=1.7e-15 Score=145.93 Aligned_cols=119 Identities=20% Similarity=0.149 Sum_probs=65.3
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCC----
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA---- 90 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga---- 90 (583)
|.++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 36 ~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~ 107 (241)
T 1k1a_A 36 GRELDIYNNLRQTP--------LHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL 107 (241)
T ss_dssp TCCSCCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSC
T ss_pred CCCCCcccccCCCH--------HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 56666666666666 455555555555555555555555555555555555555555555555555554
Q ss_pred CcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCc-ccCCccchhcccccc
Q 007949 91 ICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL-QAALRDTFLGCGANR 143 (583)
Q Consensus 91 ~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~-~~~~t~L~~A~~~~~ 143 (583)
+++..+..|.| +|+++. +.+++++|++.|++++. .+ ..|.||||.|+..++
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA--VDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTTCCCHHHHHHHTTC
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc--ccccCCCcHHHHHHHcCC
Confidence 45555555554 344443 45555555555554444 23 345555555554444
No 108
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.61 E-value=8.5e-16 Score=151.38 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=104.2
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCC--------------CChhHHHHHHHhCCHHHHHHHH
Q 007949 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ--------------WDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 21 ~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~--------------~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+|..|+|| ||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+
T Consensus 97 ~d~~g~tp--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 97 SYYKGQTA--------LHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp TTTTTCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCCH--------HHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 67789999 8999999999999999999999999997 7999999999999999999999
Q ss_pred h---cCCCcCccCCCCch-HHHHHh--h---------HHHHHHHHhCCCCCCC-----CCCcccCCccchhcccccc
Q 007949 87 E---SGAICSEHTFDGDR-CHYAAL--N---------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 87 ~---~ga~~~~~~~~g~t-~~~aa~--~---------~~i~~~L~~~~~~~~~-----~~~~~~~~t~L~~A~~~~~ 143 (583)
+ +|++++.+|..|.| +|+|+. + .+++++|+++|++++. ..++..|.||||+|+..++
T Consensus 169 ~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 169 QNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred hcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 9 99999999999999 577776 3 6899999999998763 1267889999999998887
No 109
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.61 E-value=1.4e-15 Score=160.49 Aligned_cols=119 Identities=19% Similarity=0.178 Sum_probs=95.2
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
|+++|..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 268 ~~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 268 QANGNLGNKSGLTP--------LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339 (437)
T ss_dssp TCCTTCCCTTCCCH--------HHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCC
Confidence 56666666666666 7888888888888888888888888888888888888888888888888888888888
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++..|.| +|+|+. +.+++++|+++|++++. ++..|.||+++|+..++
T Consensus 340 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~--~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 340 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE--VSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC--CCSSSCCHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC--CCCCCCCHHHHHHHcCc
Confidence 8888887 466666 78888888888888777 67788888888887665
No 110
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.61 E-value=5e-16 Score=159.81 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCC---
Q 007949 17 DLDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--- 91 (583)
Q Consensus 17 din~~d~~g~tpl~~~~~~~L~~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--- 91 (583)
+++..|..|+|| ||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 130 ~~~~~~~~g~t~--------L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 201 (364)
T 3ljn_A 130 GSHVKHCKGQTA--------LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS 201 (364)
T ss_dssp TTEEEEESCCCH--------HHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred ccccCCCCCCCH--------HHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence 344488899999 89999999 99999999999999999999999999999999999999999999999
Q ss_pred --cCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 92 --CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 92 --~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++..+..|.| +|+|+. +.+++++|+++|++++. .+..|.||||+|+..++
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~--~d~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM--EDNEHTVPLYLSVRAAM 256 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC--CCTTSCCHHHHHHHTCC
T ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHhCh
Confidence 9999999998 688887 89999999999999887 78999999999998776
No 111
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.61 E-value=4.6e-16 Score=153.77 Aligned_cols=146 Identities=14% Similarity=0.071 Sum_probs=115.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCC--CCccCCCChhHHHHHHHhCCHHHHHHHHhcCC-CcCccCCCCch-HHHHH-----h
Q 007949 37 VFEASRAGDVDRLRYILESGVN--VNARDQWDSVALYYACLAGHLDAARMLLESGA-ICSEHTFDGDR-CHYAA-----L 107 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~g~t-~~~aa-----~ 107 (583)
+|.|+..|+.+.++.++..+.+ +|.+|..|+||||+|+..|+.+++++|++.|+ +++..+..|.| +|+++ .
T Consensus 80 l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~ 159 (276)
T 4hbd_A 80 AHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKT 159 (276)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhh
Confidence 6999999999999999987766 89999999999999999999999999999998 99999999998 57777 2
Q ss_pred --hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccccc-chhhhhhhcccccccCCCCCCCCCCCcEEEEECCEeEeh
Q 007949 108 --NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF-LEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEA 184 (583)
Q Consensus 108 --~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~-l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~ 184 (583)
+.+++++|+..|..... .+..|.||||.||..++.- ++- |+..+ +|+...-.....|.
T Consensus 160 ~~~~~~v~~Ll~~g~~~~~--~~~~g~tpLh~A~~~g~~~~v~~---------Ll~~g--------ad~n~~d~~G~TpL 220 (276)
T 4hbd_A 160 QDDIETVLQLFRLGNINAK--ASQAGQTALMLAVSHGRVDVVKA---------LLACE--------ADVNVQDDDGSTAL 220 (276)
T ss_dssp HHHHHHHHHHHHHSCTTCC--CTTTCCCHHHHHHHTTCHHHHHH---------HHHTT--------CCTTCCCTTSCCHH
T ss_pred hhhHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCCHHHHHH---------HHhCC--------CCCCCCCCCCCCHH
Confidence 67888889988876665 5778899999999877621 111 11111 13333334456788
Q ss_pred hHHHHhhccHHHHHhhc
Q 007949 185 HRVILSARSVFFRRKFE 201 (583)
Q Consensus 185 Hk~iL~a~S~~f~~~~~ 201 (583)
|.++...+....+-++.
T Consensus 221 h~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 221 MCACEHGHKEIAGLLLA 237 (276)
T ss_dssp HHHHHHTCHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHh
Confidence 88888888888888887
No 112
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.61 E-value=2e-16 Score=154.62 Aligned_cols=184 Identities=12% Similarity=0.007 Sum_probs=128.7
Q ss_pred chhhhcc-cCCCCCCC----CCCCCCCCCCCcHHHHHHH---HcCCHHHHHHHHHcCCC-----------CCccCCCChh
Q 007949 8 TIDAELD-EIDLDASD----FSSSVPLKKVPNGDVFEAS---RAGDVDRLRYILESGVN-----------VNARDQWDSV 68 (583)
Q Consensus 8 ~~~~~~~-~~din~~d----~~g~tpl~~~~~~~L~~A~---~~g~~~~v~~Ll~~g~~-----------~~~~d~~g~t 68 (583)
+++..+. |.+++..+ ..|+|| ||+|+ ..|+.+++++|++.|++ ++..|..|+|
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~--------L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t 95 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTC--------LPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQT 95 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCH--------HHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBC
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcH--------HHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCC
Confidence 4444444 77888666 779999 89999 67999999999997743 4556669999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCcCccC--------------CCCch-HHHHHh--hHHHHHHHHh---CCCCCCCCCCc
Q 007949 69 ALYYACLAGHLDAARMLLESGAICSEHT--------------FDGDR-CHYAAL--NLKVRKLLKA---YEARPPPLGPL 128 (583)
Q Consensus 69 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--------------~~g~t-~~~aa~--~~~i~~~L~~---~~~~~~~~~~~ 128 (583)
|||+|+..|+.+++++|+++|++++..+ ..|.| +|+|+. +.+++++|++ .|++++. ++
T Consensus 96 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~--~d 173 (260)
T 3jxi_A 96 ALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR--QD 173 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc--cC
Confidence 9999999999999999999999999998 67888 577777 8999999999 8888887 78
Q ss_pred ccCCccchhccccccccchhhhhhhcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhc
Q 007949 129 QAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFE 201 (583)
Q Consensus 129 ~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~ 201 (583)
..|.||||+||..++...+.......+..++.+....-+.....+...-.....+.|.++-..+....+.++.
T Consensus 174 ~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 246 (260)
T 3jxi_A 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246 (260)
T ss_dssp TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999976653322222221222111110000000000001122334567888777777676666664
No 113
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.61 E-value=2.8e-15 Score=147.82 Aligned_cols=129 Identities=17% Similarity=0.203 Sum_probs=114.9
Q ss_pred cchhhhcc-cCCCCCC-CCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHH
Q 007949 7 STIDAELD-EIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (583)
Q Consensus 7 ~~~~~~~~-~~din~~-d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 84 (583)
.++...++ |.++|.. +..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 19 ~~v~~Ll~~g~~~~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQEEEGGWTP--------LHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL 90 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCCCcccccCCCCCcH--------HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 44555555 7889988 8889999 899999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCC--------cccCCccchhcccccc
Q 007949 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGP--------LQAALRDTFLGCGANR 143 (583)
Q Consensus 85 Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~--------~~~~~t~L~~A~~~~~ 143 (583)
|+++|++++..+..|.| +|+++. +.+++++|++.|++++.... +..|.||||.||..++
T Consensus 91 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 160 (285)
T 1wdy_A 91 FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160 (285)
T ss_dssp HHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC
T ss_pred HHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCC
Confidence 99999999999999998 577776 89999999999998877321 5679999999998776
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.61 E-value=5.3e-16 Score=131.49 Aligned_cols=105 Identities=25% Similarity=0.353 Sum_probs=95.6
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCC
Q 007949 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (583)
Q Consensus 20 ~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 99 (583)
.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|
T Consensus 4 ~~d~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g 75 (115)
T 2l6b_A 4 WGSKDGNTP--------LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75 (115)
T ss_dssp CCSCSSCCH--------HHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTC
T ss_pred ccCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC
Confidence 468899999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCcc
Q 007949 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRD 134 (583)
Q Consensus 100 ~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~ 134 (583)
.| +|+|+. +.+++++|+++|++++. ++..|.||
T Consensus 76 ~tpl~~A~~~~~~~~~~~Ll~~ga~~n~--~~~~~~~~ 111 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIVKLLDAKGADVNA--RSWGSSHH 111 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTSSSHHH--HSCCCC--
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCc--CCcccccc
Confidence 98 577777 89999999999999877 56666665
No 115
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.60 E-value=2.8e-15 Score=133.91 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=98.6
Q ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHH
Q 007949 34 NGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLK 110 (583)
Q Consensus 34 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~ 110 (583)
.++||.|+..|+.+++++|++.|++++ .|..|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 455999999999999999999999887 5889999999999999999999999999999999999998 577777 899
Q ss_pred HHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 111 VRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 111 i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
++++|+++|++++. ++..|.||||.|+..++
T Consensus 82 ~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 82 IVEVLLKHGADVNA--KDMLKMTALHWATEHNH 112 (153)
T ss_dssp HHHHHHTTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 99999999999887 78899999999998776
No 116
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.60 E-value=1.5e-15 Score=138.58 Aligned_cols=118 Identities=20% Similarity=0.166 Sum_probs=100.8
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 121 (172)
T 3v30_A 50 ETVRFLLEWGADPHILAKERESA--------LSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121 (172)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCH--------HHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCchhhcccCCCH--------HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455555 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCCCCCCCcccCCcc
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRD 134 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~ 134 (583)
+++|++++..+..|.|| |+|+. +.+++++|++++++... ++..|.||
T Consensus 122 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~--~~~~~~~p 171 (172)
T 3v30_A 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ--SNLVPADP 171 (172)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC--C-------
T ss_pred HHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc--ccCCCCCC
Confidence 99999999999999995 66666 89999999999987665 45555554
No 117
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.60 E-value=1e-15 Score=150.86 Aligned_cols=128 Identities=17% Similarity=0.080 Sum_probs=108.2
Q ss_pred cchhhhcc-cCCCC----CCCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCC-------Cc----cCCCCh
Q 007949 7 STIDAELD-EIDLD----ASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNV-------NA----RDQWDS 67 (583)
Q Consensus 7 ~~~~~~~~-~~din----~~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~-------~~----~d~~g~ 67 (583)
++++...+ +.+++ ..|..|+|| ||+|+.. |+.+++++|++.|+++ +. .|..|+
T Consensus 31 ~Ll~~~~~~~~~~~~~~~~~~~~g~tp--------L~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~ 102 (273)
T 2pnn_A 31 SLLPFLQRSKKRLTDSEFKDPETGKTC--------LLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102 (273)
T ss_dssp THHHHHHHSCCCTTSGGGSCTTTCCCH--------HHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTC
T ss_pred HHHHHHhhcccccCCcccccCcCCCCH--------HHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCC
Confidence 34444443 56666 458899999 8999987 9999999999987542 22 667899
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCcCccCC--------------CCch-HHHHHh--hHHHHHHHHh---CCCCCCCCCC
Q 007949 68 VALYYACLAGHLDAARMLLESGAICSEHTF--------------DGDR-CHYAAL--NLKVRKLLKA---YEARPPPLGP 127 (583)
Q Consensus 68 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~--------------~g~t-~~~aa~--~~~i~~~L~~---~~~~~~~~~~ 127 (583)
||||+|+..|+.+++++|+++|++++..+. .|.| +|+|+. +.+++++|++ .|++++. +
T Consensus 103 tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~--~ 180 (273)
T 2pnn_A 103 TALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA--R 180 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--C
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee--e
Confidence 999999999999999999999999999987 7888 577777 8999999999 8998887 7
Q ss_pred cccCCccchhccccccc
Q 007949 128 LQAALRDTFLGCGANRQ 144 (583)
Q Consensus 128 ~~~~~t~L~~A~~~~~~ 144 (583)
+..|.||||+||..++.
T Consensus 181 d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 181 DSVGNTVLHALVEVADN 197 (273)
T ss_dssp CTTSCCHHHHHHHHCCS
T ss_pred CCCCCcHHHHHHHccCc
Confidence 88999999999987764
No 118
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.60 E-value=1.9e-15 Score=155.50 Aligned_cols=168 Identities=12% Similarity=0.060 Sum_probs=121.1
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCc-------------------------
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA------------------------- 61 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------------- 61 (583)
++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.
T Consensus 35 ~v~~Ll~~g~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 106 (364)
T 3ljn_A 35 EVRRLIETGVSPTIQNRFGCTA--------LHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEG 106 (364)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCH--------HHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCccccCCCCCcH--------HHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 3444554 88999999999999 5666666666666666666655444
Q ss_pred ---------------------------cCCCChhHHHHHHHhC--CHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hH
Q 007949 62 ---------------------------RDQWDSVALYYACLAG--HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NL 109 (583)
Q Consensus 62 ---------------------------~d~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~ 109 (583)
.|..|+||||+|+..| +.+++++|+++|++++..|..|.| +|+|+. +.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~ 186 (364)
T 3ljn_A 107 AKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNR 186 (364)
T ss_dssp HHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 7778899999999999 999999999999999999999998 577776 89
Q ss_pred HHHHHHHhCCCC-----CCCCCCcccCCccchhccccccccchhhhhhhcccccccCCCCCCCCCCCcEEEEECCEeEeh
Q 007949 110 KVRKLLKAYEAR-----PPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEA 184 (583)
Q Consensus 110 ~i~~~L~~~~~~-----~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~ 184 (583)
+++++|+++|++ ++. .+..|.||||+||..++.-+-+ -|+.. ++|+...-.....+.
T Consensus 187 ~~v~~Ll~~g~~~~~~~~~~--~~~~g~t~L~~A~~~g~~~~v~--------~Ll~~--------gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 187 EALDLMMDTVPSKSSLRLDY--ANKQGNSHLHWAILINWEDVAM--------RFVEM--------GIDVNMEDNEHTVPL 248 (364)
T ss_dssp HHHHHHHHHCSCSSSCCTTC--CCTTCCCTTHHHHTTTCHHHHH--------HHHTT--------TCCTTCCCTTSCCHH
T ss_pred HHHHHHHhcccccccccccc--cCCCCCcHHHHHHHcCCHHHHH--------HHHHc--------CCCCCCCCCCCCCHH
Confidence 999999998887 665 6788999999999877731111 11111 124433334445667
Q ss_pred hHHHHhhccHHHHHhhc
Q 007949 185 HRVILSARSVFFRRKFE 201 (583)
Q Consensus 185 Hk~iL~a~S~~f~~~~~ 201 (583)
|-++-.......+-++.
T Consensus 249 ~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 249 YLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp HHHHHTCCHHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHH
Confidence 77666655555555554
No 119
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.60 E-value=4.2e-15 Score=136.58 Aligned_cols=111 Identities=21% Similarity=0.225 Sum_probs=100.0
Q ss_pred CCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch
Q 007949 23 FSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR 101 (583)
Q Consensus 23 ~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 101 (583)
..+.+| ||.|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 3 ~~~~~~--------l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 74 (179)
T 3f6q_A 3 PEFMDD--------IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 74 (179)
T ss_dssp ----CC--------HHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHH--------HHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 346777 8999999999999999997 6789999999999999999999999999999999999999999998
Q ss_pred -HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 102 -~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+|+. +.+++++|+++|++++. ++..|.||||.|+..++
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 75 PLHLAASHGHRDIVQKLLQYKADINA--VNEHGNVPLHYACFWGQ 117 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHHHcCC
Confidence 577777 89999999999999888 68899999999998776
No 120
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.60 E-value=2.8e-15 Score=152.67 Aligned_cols=173 Identities=23% Similarity=0.212 Sum_probs=134.7
Q ss_pred hhhhcc--cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 9 IDAELD--EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 9 ~~~~~~--~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+...+. +.++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 40 v~~ll~~~~~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 111 (351)
T 3utm_A 40 LMALLTPLNVNCHASDGRKSTP--------LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL 111 (351)
T ss_dssp HHHHCCTTTTTCCCSSTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhcCCCcccCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH
Confidence 344443 78899999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCC-------------------------------------
Q 007949 87 ESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLG------------------------------------- 126 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~------------------------------------- 126 (583)
++|++++..+..|.| +|+|+. +.+++++|+++|+++....
T Consensus 112 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
T 3utm_A 112 KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADL 191 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccH
Confidence 999999999999998 577776 8999999999998876521
Q ss_pred ---------------CcccCCccchhcccccccc-chhhhhhhcccccccCCCCCCCCCCCcEEEEECCEeEehhHHHHh
Q 007949 127 ---------------PLQAALRDTFLGCGANRQF-LEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILS 190 (583)
Q Consensus 127 ---------------~~~~~~t~L~~A~~~~~~~-l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~ 190 (583)
....|.||||.|+..++.- .+--.. +...+ .|+...-.....+.|.++-.
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~------Ll~~g--------~~~~~~~~~g~t~L~~A~~~ 257 (351)
T 3utm_A 192 AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAEL------LLRKG--------ANVNEKNKDFMTPLHVAAER 257 (351)
T ss_dssp HHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHH------HHHTT--------CCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHH------HHHcC--------CCcCCcCCCCCCHHHHHHHc
Confidence 2356789999999886631 111111 11111 12222223345688988888
Q ss_pred hccHHHHHhhcCC
Q 007949 191 ARSVFFRRKFETD 203 (583)
Q Consensus 191 a~S~~f~~~~~~~ 203 (583)
.....++-++..+
T Consensus 258 g~~~~v~~Ll~~g 270 (351)
T 3utm_A 258 AHNDVMEVLHKHG 270 (351)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCC
Confidence 8888888887654
No 121
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.59 E-value=3.9e-15 Score=127.77 Aligned_cols=101 Identities=24% Similarity=0.349 Sum_probs=89.9
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...+. |.++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~L 92 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKP--------LHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLL 92 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCH--------HHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCcCccCCCCCcH--------HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455555 88999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchHHHHHhhHHHHHHH
Q 007949 86 LESGAICSEHTFDGDRCHYAALNLKVRKLL 115 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~~~aa~~~~i~~~L 115 (583)
+++|++++..|..|.||...|...++.++|
T Consensus 93 l~~ga~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 93 LSKGADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp HHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 999999999999999976666655555554
No 122
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=139.13 Aligned_cols=127 Identities=19% Similarity=0.161 Sum_probs=112.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARM 84 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~ 84 (583)
.++...++ |++++.+|..|.|| ||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++
T Consensus 23 ~~~~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~ 94 (240)
T 3eu9_A 23 ERCRELVEAGYDVRQPDKENVTL--------LHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ 94 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCCCcCCCCCCCCCH--------HHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHH
Confidence 45555665 88999999999999 899999999999999999999987655 459999999999999999999
Q ss_pred HHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 85 Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+++|++++..+..|.| +|+++. +.+++++|+++|++++. .+..|.||||.|+..++
T Consensus 95 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 95 LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM--MDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHCC
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHHHhCC
Confidence 99999999999999998 577776 89999999999998877 68899999999996555
No 123
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.59 E-value=1.4e-15 Score=147.31 Aligned_cols=108 Identities=25% Similarity=0.208 Sum_probs=99.5
Q ss_pred CCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC-CCCch
Q 007949 23 FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT-FDGDR 101 (583)
Q Consensus 23 ~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~t 101 (583)
..|.|| ||+|+..|+.++++.|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.|
T Consensus 43 ~~g~t~--------L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETP--------WWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHH--------HHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCC
T ss_pred cCCCCH--------HHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCC
Confidence 356677 899999999999999999 99999999999999999999999999999999999999988 78998
Q ss_pred -HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccc
Q 007949 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (583)
Q Consensus 102 -~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~ 141 (583)
+|+|+. +.+++++|+++|++++. ++..|.||||+|+..
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEV--EDERGLTALELAREI 154 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHHHH
Confidence 577777 89999999999999887 789999999999953
No 124
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.58 E-value=7.7e-15 Score=125.88 Aligned_cols=106 Identities=33% Similarity=0.485 Sum_probs=96.4
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |++++..|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 17 ~v~~Ll~~~~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 88 (126)
T 1n0r_A 17 VVKLLLEAGADVNAKDKNGRTP--------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (126)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCcH--------HHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 3444444 78899999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCC
Q 007949 87 ESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~ 121 (583)
++|++++..+..|.|| |+|+. +.+++++|+++|++
T Consensus 89 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 89 EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999995 66665 89999999999875
No 125
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.58 E-value=2.6e-15 Score=144.92 Aligned_cols=129 Identities=17% Similarity=0.167 Sum_probs=107.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|
T Consensus 51 ~~v~~Ll~~g~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~L 122 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPNDEGITA--------LHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122 (239)
T ss_dssp HHHHHHTSTTSSCCCCCTTSCCH--------HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34555665 88999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCc-hH-HHH--Hh--hHHHHHHHHhCCCCCCCCCC-------cccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGD-RC-HYA--AL--NLKVRKLLKAYEARPPPLGP-------LQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~-t~-~~a--a~--~~~i~~~L~~~~~~~~~~~~-------~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..+..|. || |.+ +. +.+++++|+.+|++++.... +..+.++++++...+.
T Consensus 123 l~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 123 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999999998887 85 554 22 68999999999988776211 2345566666654443
No 126
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.58 E-value=6.9e-15 Score=132.53 Aligned_cols=106 Identities=27% Similarity=0.320 Sum_probs=95.3
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 52 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 52 IARRLLLRGANPDLKDRTGFAV--------IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4444554 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCC-cCccCCCCchH-HHHHh--hHHHHHHHHhCCCC
Q 007949 87 ESGAI-CSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 87 ~~ga~-~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~ 121 (583)
++|++ ++..+..|.|| |+|+. +.+++++|+++|++
T Consensus 124 ~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99998 59999999995 66666 89999999999874
No 127
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.58 E-value=9.6e-15 Score=148.72 Aligned_cols=116 Identities=22% Similarity=0.173 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 96 (583)
.+..+..|.+| ||.|+..|+.+.++.++. .+++++..|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 17 ~~~~~~~~~~~--------L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 88 (351)
T 3utm_A 17 AVLTGEYKKDE--------LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHH--------HHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred eeeeccccchh--------HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 34445566777 899999999999998887 589999999999999999999999999999999999999999
Q ss_pred CCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 97 FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 97 ~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
..|.| +|+|+. +.+++++|+++|++++. .+..|.||||+|+..++
T Consensus 89 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYEVTELLLKHGACVNA--MDLWQFTPLHEAASKNR 136 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHTTC
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 99998 577777 89999999999999887 68899999999998887
No 128
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.57 E-value=5.4e-15 Score=133.78 Aligned_cols=106 Identities=25% Similarity=0.375 Sum_probs=94.7
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 56 ~~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 56 SVVEYLLQHGADVHAKDKGGLVP--------LHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhcCCCCCccCCCCCCH--------HHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34445555 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh-hHHHHHHHHhCCC
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL-NLKVRKLLKAYEA 120 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~-~~~i~~~L~~~~~ 120 (583)
+++|++++.+|..|.|| |+++. +.+++++|++.|+
T Consensus 128 l~~ga~~~~~~~~g~t~l~~a~~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 128 LQHGADPTKKNRDGNTPLDLVKDGDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCCTTCCCTTSCCTGGGSCTTCHHHHHHHHTC--
T ss_pred HHcCCCCcccCCCCCChhHhHhcCChHHHHHHhhccc
Confidence 99999999999999995 55444 8899999998875
No 129
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.57 E-value=2.7e-15 Score=154.93 Aligned_cols=164 Identities=13% Similarity=0.075 Sum_probs=129.6
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcC---CC
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG---AI 91 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~ 91 (583)
|+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++
T Consensus 156 ga~vn~~d~~g~Tp--------L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 227 (373)
T 2fo1_E 156 GADVNAMDCDENTP--------LMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 227 (373)
T ss_dssp CCCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred CCCCcCCCCCCCCH--------HHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC
Confidence 89999999999999 89999999999999999999999999999999999999999999999999998 89
Q ss_pred cCccCCCCch-HHHHHh-----hHHHHHHHHhCCCCCCCCC------CcccCCccchhccccccc-cchhhhhhhccccc
Q 007949 92 CSEHTFDGDR-CHYAAL-----NLKVRKLLKAYEARPPPLG------PLQAALRDTFLGCGANRQ-FLEEAEVVLGISGV 158 (583)
Q Consensus 92 ~~~~~~~g~t-~~~aa~-----~~~i~~~L~~~~~~~~~~~------~~~~~~t~L~~A~~~~~~-~l~~~~~~~~~~~l 158 (583)
++..+..|.| +|+++. +.+++++|+++|++++... .+..|.||||.||..++. .++. |
T Consensus 228 ~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~---------L 298 (373)
T 2fo1_E 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY---------L 298 (373)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHH---------H
T ss_pred hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHH---------H
Confidence 9999999999 577776 5789999999999887521 355899999999988772 1111 1
Q ss_pred ccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 159 TSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 159 ~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
+..+. .|+...-.....+.|-++-...-..++-++..
T Consensus 299 l~~~~-------~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 299 VGEKG-------SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 335 (373)
T ss_dssp HHHSC-------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHhcC-------CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 11110 12222223345678877766666656655543
No 130
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.56 E-value=5.8e-15 Score=158.41 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=96.0
Q ss_pred chhhhcc-cCCCCCC------CCCCCCCCCCCCcHHHHHHHH---cCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhC
Q 007949 8 TIDAELD-EIDLDAS------DFSSSVPLKKVPNGDVFEASR---AGDVDRLRYILESGVNVNARDQWDSVALYYACLAG 77 (583)
Q Consensus 8 ~~~~~~~-~~din~~------d~~g~tpl~~~~~~~L~~A~~---~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 77 (583)
.+...+. |+++|.. |..|+|| ||+||. .|+.+++++|+++|+++|.+|..|+||||+|+..|
T Consensus 147 ~v~~ll~~g~~~n~~~~~~~~~~~g~t~--------Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g 218 (497)
T 3lvq_E 147 SVLEAFANGQDFGQPLPGPDAQAPEELV--------LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYN 218 (497)
T ss_dssp HHHHHHHTTCCSSSCBCCSSSCCSCBCH--------HHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTT
T ss_pred HHHHHHhhcccccCCCCCcccccccchH--------HHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC
Confidence 3445554 8889888 8899999 899976 99999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhccc
Q 007949 78 HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (583)
Q Consensus 78 ~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~ 140 (583)
+.+++++|+++|++++..|..|.| +|+|+. +.+++++|+++|++++. +|+|.++.
T Consensus 219 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~--------~~~h~~~~ 276 (497)
T 3lvq_E 219 QPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA--------FPLHVDYS 276 (497)
T ss_dssp CHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC--------Ccceeecc
Confidence 999999999999999999999999 577766 89999999999998755 57787764
No 131
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.56 E-value=1.7e-14 Score=142.18 Aligned_cols=171 Identities=19% Similarity=0.149 Sum_probs=131.8
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...++ |++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 54 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 125 (285)
T 1wdy_A 54 IVELLLRHGADPVLRKKNGATP--------FLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCcccCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHH
Confidence 4444554 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCcc----------CCCCch-HHHHHh--hHHHHHHHHhC-CCCCCCCCCcccCCccchhccccccccchhhhhh
Q 007949 87 ESGAICSEH----------TFDGDR-CHYAAL--NLKVRKLLKAY-EARPPPLGPLQAALRDTFLGCGANRQFLEEAEVV 152 (583)
Q Consensus 87 ~~ga~~~~~----------~~~g~t-~~~aa~--~~~i~~~L~~~-~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~ 152 (583)
++|++++.. +..|.| +|+++. +.+++++|++. |.+++. .+..|.||||.|+..++..--
T Consensus 126 ~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~----- 198 (285)
T 1wdy_A 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA--CDNMGRNALIHALLSSDDSDV----- 198 (285)
T ss_dssp HTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHHHHCSCTTTH-----
T ss_pred HhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc--cCCCCCCHHHHHHHccccchH-----
Confidence 999999987 677888 577777 89999999987 888777 688999999999987762100
Q ss_pred hcccc-cccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhc
Q 007949 153 LGISG-VTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFE 201 (583)
Q Consensus 153 ~~~~~-l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~ 201 (583)
..+.. +...+ .|+...-.....+.|.++-......++.++.
T Consensus 199 ~~i~~~Ll~~g--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 199 EAITHLLLDHG--------ADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHHHHTT--------CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcC--------CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 01111 11111 1332222334567777776666666665554
No 132
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.55 E-value=5.9e-15 Score=152.43 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcC---CHHHHHHHHHcCCCCCc--------cCCCChhHHHHHHHhCCHHHHHH
Q 007949 16 IDLDASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNA--------RDQWDSVALYYACLAGHLDAARM 84 (583)
Q Consensus 16 ~din~~d~~g~tpl~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~~~--------~d~~g~t~L~~A~~~g~~~~v~~ 84 (583)
++++..|..|+|| ||+|+..| +.+++++|+++|++++. .|..|+||||+|+..|+.+++++
T Consensus 226 ~~~~~~d~~g~t~--------L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 297 (373)
T 2fo1_E 226 GDIEELDRNGMTA--------LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY 297 (373)
T ss_dssp HTTSCCCTTSCCH--------HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHH
T ss_pred cChhhcCCCCCCH--------HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHH
Confidence 5777777777777 89999998 89999999999999886 67799999999999999999999
Q ss_pred HHhcC-CCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 85 LLESG-AICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 85 Ll~~g-a~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+++| ++++..|..|.| +|+|+. +.+++++|+++|++++. ++..|.|||++|+..++
T Consensus 298 Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~--~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 298 LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA--VDATDHTARQLAQANNH 358 (373)
T ss_dssp HHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--CCSSSCCHHHHHHHTTC
T ss_pred HHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC--CCCCCCCHHHHHHHcCC
Confidence 99876 999999999999 577777 89999999999999888 78899999999998887
No 133
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.54 E-value=2.6e-14 Score=127.87 Aligned_cols=103 Identities=21% Similarity=0.264 Sum_probs=93.4
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 49 ~~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 49 AIALELLKQGASPNVQDTSGTSP--------VHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCH--------HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 34444555 89999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhC
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAY 118 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~ 118 (583)
+++ ++++..|..|.|| |+|+. +.+++++|+++
T Consensus 121 l~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 121 AAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred Hhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999 9999999999995 66666 89999999864
No 134
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.54 E-value=2.1e-14 Score=145.93 Aligned_cols=163 Identities=18% Similarity=0.139 Sum_probs=123.6
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCcc----------CCCChhHHHHHHHhCCHHHHHH
Q 007949 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR----------DQWDSVALYYACLAGHLDAARM 84 (583)
Q Consensus 15 ~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------d~~g~t~L~~A~~~g~~~~v~~ 84 (583)
+.++|..|..|+|| +|+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 115 ~~~~~~~d~~g~t~--------l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~ 186 (337)
T 4g8k_A 115 GADVNECDFYGFTA--------FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 186 (337)
T ss_dssp TCCTTCBCTTCCBH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHH
T ss_pred cchhhhhccCCCCH--------HHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHH
Confidence 67788888888888 89999999999999999999988754 4468999999999999999999
Q ss_pred HHh-cCCCcCccCCCCch-HHHHHh------hHHHHHHHHhCCCCCCCCCCcccCCccchhccccccccchhhhhhhccc
Q 007949 85 LLE-SGAICSEHTFDGDR-CHYAAL------NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGIS 156 (583)
Q Consensus 85 Ll~-~ga~~~~~~~~g~t-~~~aa~------~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~l~~~~~~~~~~ 156 (583)
|++ .|++++..+..|.+ +|+++. ...++++|+++|++++. ++..|.||||.||..++...- .
T Consensus 187 LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~--~d~~g~t~L~~a~~~~~~~~v--------~ 256 (337)
T 4g8k_A 187 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV--RGERGKTPLILAVEKKHLGLV--------Q 256 (337)
T ss_dssp HHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC--CCGGGCCHHHHHHHTTCHHHH--------H
T ss_pred HHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhhhhHHH--------H
Confidence 995 59999999999998 566555 35689999999999888 788999999999987762111 1
Q ss_pred ccccCCCCCCCCCCCcEEEEECCEeEehhHHHHhhccHHHHHhhcC
Q 007949 157 GVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFET 202 (583)
Q Consensus 157 ~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~ 202 (583)
.|+... ..|+...-.....+.|-++-..+....+-++..
T Consensus 257 ~Ll~~~-------~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 257 RLLEQE-------HIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp HHHTST-------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHhc-------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 121111 113333333445678877766555555555543
No 135
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=138.46 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=54.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh---hHHHH
Q 007949 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL---NLKVR 112 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~---~~~i~ 112 (583)
||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.| +|+++. ..+++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555554 344442 23445
Q ss_pred HHHHhCCCCCCCCCCcc-cCCccchhcccccc
Q 007949 113 KLLKAYEARPPPLGPLQ-AALRDTFLGCGANR 143 (583)
Q Consensus 113 ~~L~~~~~~~~~~~~~~-~~~t~L~~A~~~~~ 143 (583)
++|+..|++++. .+. .|.||||.||..++
T Consensus 160 ~~L~~~~~~~~~--~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 160 RLLLTFNVSVNL--GDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp HHHHHTTCCTTC--CCTTTCCCHHHHHHHHTC
T ss_pred HHHHhcCCCcch--hhccCCCcHHHHHHHcCC
Confidence 555555554444 222 44555555554444
No 136
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.54 E-value=1.9e-14 Score=142.14 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=89.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 94 (583)
++..|..|+|| ||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 162 l~~~~~~g~t~--------Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 233 (278)
T 1dcq_A 162 LANGHEPDETA--------LHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 233 (278)
T ss_dssp CSSCSSTTCBH--------HHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ccccccCCCCc--------chHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 55668899999 8999999 899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCch-HHHHHh--hHHHHHHHHhCCCC
Q 007949 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 95 ~~~~g~t-~~~aa~--~~~i~~~L~~~~~~ 121 (583)
+|..|.| +|+|+. +.+++++|+++|+.
T Consensus 234 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 234 ANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999 577766 89999999998874
No 137
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.52 E-value=1.1e-14 Score=127.36 Aligned_cols=104 Identities=22% Similarity=0.222 Sum_probs=87.8
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
++...+. |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 25 ~~~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 96 (137)
T 3c5r_A 25 SVEYLLQNGSDPNVKDHAGWTP--------LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLL 96 (137)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444444 88999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcCccCCCCchHHHHHh---hHHHHHHHHhCC
Q 007949 87 ESGAICSEHTFDGDRCHYAAL---NLKVRKLLKAYE 119 (583)
Q Consensus 87 ~~ga~~~~~~~~g~t~~~aa~---~~~i~~~L~~~~ 119 (583)
++|++++..|..|.||...|. ..+++.+|.+.+
T Consensus 97 ~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 97 SYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999644444 455555554433
No 138
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.51 E-value=3.4e-14 Score=145.53 Aligned_cols=108 Identities=20% Similarity=0.161 Sum_probs=101.2
Q ss_pred cHHHHHHHHc-CCHHHHHHHHHcCCCCCccC--CCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--
Q 007949 34 NGDVFEASRA-GDVDRLRYILESGVNVNARD--QWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL-- 107 (583)
Q Consensus 34 ~~~L~~A~~~-g~~~~v~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~-- 107 (583)
.++||.|+.. |+.++++.|++.|+++|..+ ..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+.
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 279 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4569999999 99999999999999999998 89999999999999999999999999999999999999 577777
Q ss_pred hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 108 ~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+.+++++|+++|++++. .+..|.||||+|+..++
T Consensus 280 ~~~~v~~LL~~Gad~~~--~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 280 HTGLACLFLKRGADLGA--RDSEGRDPLTIAMETAN 313 (368)
T ss_dssp CHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred cHHHHHHHHHCcCCCCC--cCCCCCCHHHHHHHCCC
Confidence 89999999999999888 78899999999998777
No 139
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.51 E-value=2.2e-14 Score=136.60 Aligned_cols=109 Identities=18% Similarity=0.238 Sum_probs=89.5
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
++...++ |+++|.+|..|+|| ||+||..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g~t~--------L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~L 159 (222)
T 3ehr_A 88 WLRECLDNRVGVNGLDKAGSTA--------LYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLL 159 (222)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHhCCCCccccCCCCCCH--------HHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4455555 89999999999999 8999999999999999998 999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCCCCC
Q 007949 86 LESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPP 124 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~~~~ 124 (583)
+++|++++..|..|.|| |+|+. +.++++.|+..++....
T Consensus 160 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 160 LAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 99999999999999995 55555 78888888888887655
No 140
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.50 E-value=7.9e-14 Score=128.57 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=94.9
Q ss_pred cchhhhcccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...++|+++|.+|..|+|| ||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..|+.+++++|
T Consensus 58 ~~v~~Ll~~~~~~~~d~~g~t~--------L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 129 (183)
T 3deo_A 58 QALSQLLEDRDVDAVDENGRTA--------LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129 (183)
T ss_dssp HHHHHHTTTSCTTCCCTTSCCH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhcCCCCCcCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHH
Confidence 3455566689999999999999 899999999999999999999999998 8999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHhhHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDRC-HYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++.+|..|.|| |+|+.... ...+.++|+.|+..++
T Consensus 130 l~~ga~~~~~d~~g~tpl~~A~~~~~-----------------~~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 130 VELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGL 171 (183)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHHHH-----------------TCCCCSHHHHHHHHHH
T ss_pred HHcCCCCcCCCCCCCCHHHHHHHhcc-----------------CcccccHHHHHHHcCH
Confidence 99999999999999995 55543111 1225677777776555
No 141
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.49 E-value=6e-14 Score=150.49 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=100.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCcc------CCCChhHHHHHHH---hCCHHHHHHHHhcCCCcCccCCCCch-HHH
Q 007949 35 GDVFEASRAGDVDRLRYILESGVNVNAR------DQWDSVALYYACL---AGHLDAARMLLESGAICSEHTFDGDR-CHY 104 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~------d~~g~t~L~~A~~---~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~ 104 (583)
+.||.|+..|+.+.++.|++.|+++|.+ |..|+||||+|+. .|+.+++++|+++|++++.+|..|.| +|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5699999999999999999999999987 8899999999977 89999999999999999999999999 577
Q ss_pred HHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 105 aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGT--VNEAGETALDIARKKHH 252 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSC--CCTTCCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCC
Confidence 777 89999999999999888 78899999999998877
No 142
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.49 E-value=6.2e-14 Score=143.56 Aligned_cols=125 Identities=21% Similarity=0.221 Sum_probs=97.4
Q ss_pred cchhhhcc-cCCCCCCC--CCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHH
Q 007949 7 STIDAELD-EIDLDASD--FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAAR 83 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d--~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 83 (583)
.++...+. |+++|..+ ..|+|| ||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++++
T Consensus 214 ~~v~~LL~~Gadvn~~~~~~~g~Tp--------Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~ 285 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGGQDNATP--------LIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLAC 285 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHcCCCCCccccccCCCCH--------HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 55666665 89999998 899999 89999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCC-CCcccCCccchhcc
Q 007949 84 MLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPL-GPLQAALRDTFLGC 139 (583)
Q Consensus 84 ~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~-~~~~~~~t~L~~A~ 139 (583)
+|+++|++++..|..|.| +|+|+. +.+++++|+..+...... .....+.|+++++.
T Consensus 286 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 286 LFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred HHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 999999999999999999 566666 899999999877543221 13455677777655
No 143
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.49 E-value=2e-14 Score=133.03 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=92.9
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCC------HHHHHHHHHcCCCCCccCCCCh-hHHHHHHHh---
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGD------VDRLRYILESGVNVNARDQWDS-VALYYACLA--- 76 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~------~~~v~~Ll~~g~~~~~~d~~g~-t~L~~A~~~--- 76 (583)
++...++ |+|+|.+|..|+|| ||+|+..|+ .+++++|+++|+++|.+|..|+ ||||+|+..
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~Tp--------Lh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTL--------FFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCT--------HHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred HHHHHHHCCCCCCCCCCCCCcH--------HHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCC
Confidence 4555666 99999999999999 899999987 6889999999999999999999 999999984
Q ss_pred --CCHHHHHHHHh-cCCCcCccCCCCchH-HHHHh--hHHHHHHHHhCCCC
Q 007949 77 --GHLDAARMLLE-SGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (583)
Q Consensus 77 --g~~~~v~~Ll~-~ga~~~~~~~~g~t~-~~aa~--~~~i~~~L~~~~~~ 121 (583)
++.+++++|++ +|++++.+|..|.|| |+|+. +.+++++|..+...
T Consensus 129 ~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 129 ENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44679999999 999999999999995 66666 88899999876543
No 144
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.48 E-value=1.4e-13 Score=135.98 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=98.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCC------CccCCCChhHHHHHHHh---CCHHHHHHHHhcCCCcCccCCCCch-HHH
Q 007949 35 GDVFEASRAGDVDRLRYILESGVNV------NARDQWDSVALYYACLA---GHLDAARMLLESGAICSEHTFDGDR-CHY 104 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~~g~~~------~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~ 104 (583)
.+|+.|+..|+.+.+..++..|+++ +..|..|+||||+|+.. |+.+++++|+++|++++.+|..|.| +|+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 4589999999999999999999984 44588999999999999 8999999999999999999999999 588
Q ss_pred HHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 105 aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~--~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEI--ANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC--ccCCCCCHHHHHHHcCC
Confidence 877 89999999999999888 78999999999998887
No 145
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.48 E-value=7.4e-14 Score=117.25 Aligned_cols=90 Identities=28% Similarity=0.379 Sum_probs=79.0
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCC
Q 007949 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (583)
Q Consensus 18 in~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 97 (583)
++..|.+|+|| ||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 17 ~~~~~~~g~t~--------L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 17 GSHMGSDLGKK--------LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp -----CCHHHH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCccchH--------HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 44456778888 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCch-HHHHHh--hHHHHHHH
Q 007949 98 DGDR-CHYAAL--NLKVRKLL 115 (583)
Q Consensus 98 ~g~t-~~~aa~--~~~i~~~L 115 (583)
.|.| +|+|+. +.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 9999 577666 78888876
No 146
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.48 E-value=1.5e-13 Score=133.01 Aligned_cols=112 Identities=19% Similarity=0.145 Sum_probs=97.8
Q ss_pred cchhhhcccCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...+.|+++|.+|..|+|| ||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..|+.+++++|
T Consensus 59 ~~v~~Ll~~~~~~~~d~~g~t~--------L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 130 (244)
T 3ui2_A 59 QALSQLLEDRDVDAVDENGRTA--------LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 130 (244)
T ss_dssp HHHHHTTTTCCTTCBCTTSCBH--------HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCH--------HHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4556666789999999999999 899999999999999999999999998 8899999999999999999999
Q ss_pred HhcCCCcCccCCCCchH-HHHHhhHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDRC-HYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~-~~aa~~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+++|++++..|..|.|| |+++.. . ....+.|||++|+..++
T Consensus 131 l~~ga~~~~~d~~g~t~l~~A~~~-------~----------~~~~~~~~l~~a~~~g~ 172 (244)
T 3ui2_A 131 VELGADIEVEDERGLTALELAREI-------L----------KTTPKGNPMQFGRRIGL 172 (244)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHH-------H----------TTCCCSSHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCcHHHHHHHH-------H----------hccCCCCHHHHHHHcCh
Confidence 99999999999999995 655421 1 12347899999998777
No 147
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=138.09 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=100.2
Q ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCChhHHHHHHHh---CCHHHHHHHHhcCCCcCccCCCCch-HH
Q 007949 34 NGDVFEASRAGDVDRLRYILESGVNVNA------RDQWDSVALYYACLA---GHLDAARMLLESGAICSEHTFDGDR-CH 103 (583)
Q Consensus 34 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~t-~~ 103 (583)
.++|+.|+..|+.+.++.|+..|++++. .+..|+||||+|+.. |+.+++++|+++|++++..|..|.| +|
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 4559999999999999999999999998 689999999999997 8999999999999999999999999 57
Q ss_pred HHHh--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 104 YAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 104 ~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
+|+. +.+++++|+++|++++. ++..|.||||+|+..++
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~--~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGT--VNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSC--CCTTSCCHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCC
Confidence 7777 89999999999999888 78999999999998777
No 148
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.46 E-value=2.6e-13 Score=137.82 Aligned_cols=128 Identities=17% Similarity=0.197 Sum_probs=87.3
Q ss_pred chhhhcc-cCCCCCCCCC-CCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFS-SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~-g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
++...++ |+|+|.++.. |+|| ||+|+..|+.+++++|+++|++++.++..+.++++.++..++..++..+
T Consensus 40 ~V~~LL~~Gadvn~~~~~~g~Tp--------Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (337)
T 4g8k_A 40 LVQQLLEGGANVNFQEEEGGWTP--------LHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLF 111 (337)
T ss_dssp HHHHHHHHTCCTTCCCTTTCCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHCCCCCCccCCCCCcCH--------HHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHh
Confidence 3344444 6666666543 6666 5666666666666666666666666666666666666666666666666
Q ss_pred HhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCC--------CcccCCccchhcccccc
Q 007949 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLG--------PLQAALRDTFLGCGANR 143 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~--------~~~~~~t~L~~A~~~~~ 143 (583)
+..+++++..+..|.| +|+++. +.+++++|+++|++++... .+..|.||||.||..++
T Consensus 112 ~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 112 LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 6666677777888888 466666 7888899999888776532 23357899999998776
No 149
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.41 E-value=4.4e-13 Score=108.65 Aligned_cols=76 Identities=33% Similarity=0.573 Sum_probs=70.7
Q ss_pred chhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHHH
Q 007949 8 TIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (583)
Q Consensus 8 ~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 86 (583)
+++..++ |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 17 ~v~~Ll~~g~~~n~~d~~g~t~--------L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 17 VVKLLLEAGADVNAKDKNGRTP--------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCH--------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCCCcccCCCCCCH--------HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4445554 89999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCC
Q 007949 87 ESGAI 91 (583)
Q Consensus 87 ~~ga~ 91 (583)
++|++
T Consensus 89 ~~ga~ 93 (93)
T 1n0q_A 89 EAGAY 93 (93)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 99985
No 150
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.37 E-value=3.6e-13 Score=113.77 Aligned_cols=88 Identities=20% Similarity=0.336 Sum_probs=80.1
Q ss_pred cchhhhcc-cCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCHHHHHHHHHcCCCCCccCCCChhHHHHHHHhCCHHHHHHH
Q 007949 7 STIDAELD-EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (583)
Q Consensus 7 ~~~~~~~~-~~din~~d~~g~tpl~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 85 (583)
.++...+. |+++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 23 ~~~~~Ll~~g~~~~~~d~~g~t~--------L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~L 94 (115)
T 2l6b_A 23 EEVKKLLSKGADVNARSKDGNTP--------LHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLL 94 (115)
T ss_dssp HHHHHHTTTTCCSSCCCSSSCCT--------THHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCH--------HHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 34455555 88999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCccCCCCchH
Q 007949 86 LESGAICSEHTFDGDRC 102 (583)
Q Consensus 86 l~~ga~~~~~~~~g~t~ 102 (583)
+++|++++..+..|.+|
T Consensus 95 l~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 95 DAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTSSSHHHHSCCCC--
T ss_pred HHcCCCCCcCCcccccc
Confidence 99999999999999874
No 151
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.31 E-value=6.6e-13 Score=134.37 Aligned_cols=128 Identities=12% Similarity=-0.062 Sum_probs=98.7
Q ss_pred hhcc-cCCCCCCCCCCCCCCCC--------------CCcHHH-----------------------HHHHHcCCHHHHHHH
Q 007949 11 AELD-EIDLDASDFSSSVPLKK--------------VPNGDV-----------------------FEASRAGDVDRLRYI 52 (583)
Q Consensus 11 ~~~~-~~din~~d~~g~tpl~~--------------~~~~~L-----------------------~~A~~~g~~~~v~~L 52 (583)
..++ |++++.+|..|.|+++. .....+ |.|+..+..++++.|
T Consensus 37 ~ll~~ga~i~~~~~~g~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l 116 (327)
T 1sw6_A 37 DFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAF 116 (327)
T ss_dssp STTTSSCCCEECBCCCCCCCHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHC
T ss_pred HHhhCCcccccCCCCCCcccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHH
Confidence 3444 88899999889888641 111112 445555556777788
Q ss_pred HHcCCCCCc-cCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--h---HHHHHHHHhCC-CCCCC
Q 007949 53 LESGVNVNA-RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--N---LKVRKLLKAYE-ARPPP 124 (583)
Q Consensus 53 l~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~---~~i~~~L~~~~-~~~~~ 124 (583)
++.|+++|. .|..|+||||+|+..|+.+++++|+++|++++.+|..|.| +|+|+. + .+++..|++.+ .+++.
T Consensus 117 ~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~ 196 (327)
T 1sw6_A 117 PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 196 (327)
T ss_dssp TTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred HhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC
Confidence 888899999 8999999999999999999999999999999999999999 577777 3 36677777666 45555
Q ss_pred CCCcccCCccchhccc
Q 007949 125 LGPLQAALRDTFLGCG 140 (583)
Q Consensus 125 ~~~~~~~~t~L~~A~~ 140 (583)
++..|.||||+||.
T Consensus 197 --~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 197 --EDSMNRTILHHIII 210 (327)
T ss_dssp --ECTTCCCHHHHHHH
T ss_pred --CCCCCCCHHHHHHH
Confidence 68899999999997
No 152
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.30 E-value=6.3e-12 Score=112.31 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=98.6
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccc-cCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCC--------
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFY-EGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG-------- 414 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~-e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~-------- 414 (583)
|++.+ +|+.|.+|+.+ +..|+||++||... ++. |+ ....|.+++|++.+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~-~~~~e~-------~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~ 73 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL-GMDDEG-------DDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPED 73 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSS-CSS-------------CEECTTSCHHHHHHHHHHHHHTTTCCC----
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhc-CCcccc-------cCCCcCCCCccHHHHHHHHHHHHHcCcCCCCccc
Confidence 66664 79999999999 89999999999862 333 32 33579999999999999999999998
Q ss_pred ------------------CCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcCcHHH
Q 007949 415 ------------------LKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKV 473 (583)
Q Consensus 415 ------------------~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L 473 (583)
+ .++.+++.+|+.+|++|++.+|.+.|++++...+...|++.+-.++.+...|...+.
T Consensus 74 ~~~~~~~~~~i~~wD~~F~-~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe 149 (159)
T 2ast_A 74 DENKEKRTDDIPVWDQEFL-KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 149 (159)
T ss_dssp -------CCCCCHHHHHHT-CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHH
T ss_pred ccccccchhhhhHHHHHHH-cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 5 678899999999999999999999999999999987888888888777666654433
No 153
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.21 E-value=6e-13 Score=136.76 Aligned_cols=106 Identities=16% Similarity=0.020 Sum_probs=65.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCC---CccCCCChhHHHHHHHhCCHHHHHHHHhcCCCc---CccCCCCch-HHHHHh--
Q 007949 37 VFEASRAGDVDRLRYILESGVNV---NARDQWDSVALYYACLAGHLDAARMLLESGAIC---SEHTFDGDR-CHYAAL-- 107 (583)
Q Consensus 37 L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~t-~~~aa~-- 107 (583)
||+|+..|+.+++++|++.|+.. +..+..|.||||+|+..|+.+++++|+++|+++ +..+.+ .| +|+||.
T Consensus 96 Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G 174 (376)
T 2aja_A 96 CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENG 174 (376)
T ss_dssp HHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCC
Confidence 67777777777777777776622 233445677777777777777777777777652 222222 55 466666
Q ss_pred hHHHHHHHHhCCCCCCCCCCcccCCccchhcc-cccc
Q 007949 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC-GANR 143 (583)
Q Consensus 108 ~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~-~~~~ 143 (583)
+.+++++|+++|++++....+..|.||||.|+ .+|+
T Consensus 175 ~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 175 HLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp CHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 67777777777765432112455677777777 6666
No 154
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.19 E-value=2.9e-11 Score=101.20 Aligned_cols=83 Identities=23% Similarity=0.149 Sum_probs=72.6
Q ss_pred CCccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCccCCCCch-HHHHHh--hHHHHHHHHhCCCCCCCCCCcccCCccc
Q 007949 59 VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDT 135 (583)
Q Consensus 59 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t-~~~aa~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L 135 (583)
....|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.+++++|+++|++++. ++..|.|||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl 94 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA--QDKFGKTAF 94 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cccCCCcHH
Confidence 4456789999999999999999999999999999999999998 577777 89999999999999887 788999999
Q ss_pred hhcccccc
Q 007949 136 FLGCGANR 143 (583)
Q Consensus 136 ~~A~~~~~ 143 (583)
|+|+..++
T Consensus 95 ~~A~~~~~ 102 (110)
T 2zgd_A 95 DISIDNGN 102 (110)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99998776
No 155
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.19 E-value=8.6e-13 Score=135.57 Aligned_cols=100 Identities=15% Similarity=0.033 Sum_probs=86.4
Q ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCChhHHHHHHHhCCHHHHHHHHhcCCCcCc--cCCCCch-HHHHH-
Q 007949 34 NGDVFEASRAGDVDRLRYILESGVNV---NARDQWDSVALYYACLAGHLDAARMLLESGAICSE--HTFDGDR-CHYAA- 106 (583)
Q Consensus 34 ~~~L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~t-~~~aa- 106 (583)
.++||+||..|+.+++++|+++|+++ +..+.. +||||+|+..|+.+++++|+++|++++. .+..|.| +|+|+
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~ 207 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAV 207 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHH
Confidence 34599999999999999999999752 222222 9999999999999999999999999887 8888888 69999
Q ss_pred h--hHHHHHHHHhCCCCCCCCCCcccCCccchhcccccc
Q 007949 107 L--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (583)
Q Consensus 107 ~--~~~i~~~L~~~~~~~~~~~~~~~~~t~L~~A~~~~~ 143 (583)
. +.+++++|++.|. .|.|||+.|+..++
T Consensus 208 ~~G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g~ 237 (376)
T 2aja_A 208 GRGHHNVINFLLDCPV---------MLAYAEIHEFEYGE 237 (376)
T ss_dssp TTCCHHHHHHHTTSHH---------HHHHHHHCTTTTTT
T ss_pred HCCCHHHHHHHHhCCC---------ccchHHHHHHHCCC
Confidence 7 8999999998663 38899999999888
No 156
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=1.9e-11 Score=101.10 Aligned_cols=91 Identities=13% Similarity=0.098 Sum_probs=72.0
Q ss_pred CChhhHHHHHHHHHhcCcHHHHHHHHHHHHhhHHHhhCchhHHHHHhcCCCCCCCccccccCCCCCCccccCCCccchHH
Q 007949 453 VSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDD 532 (583)
Q Consensus 453 ~~~~n~~~~l~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ee~d~~e~~~~ 532 (583)
++++||+.++.+|+.|+++.|.+.|.+||.+||..+..+++|.+|+.+ .+..+.+++ +.+| .+++ +
T Consensus 8 L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~-------~L~~lL~sd--v~~E----~~vf-~ 73 (105)
T 2eqx_A 8 VQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHR-------LLTDIISDG--VPCS----QNPT-E 73 (105)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHH-------HHHHHHHTC--EETT----SCHH-H
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHH-------HHHHHHcCC--CCCH----HHHH-H
Confidence 389999999999999999999999999999999999999999998776 333333344 5666 5666 9
Q ss_pred HHHHHHHHHhhhhhcchhhHHhHHHHHH
Q 007949 533 LREKWLEAEAAELDKRDESALMFDKRLE 560 (583)
Q Consensus 533 ~~~~Wl~~~~~~~~~~~~~~~~~~~~~~ 560 (583)
++++|+++++.. |..+...+++.+|
T Consensus 74 av~~Wv~~d~~~---R~~~~~~Ll~~VR 98 (105)
T 2eqx_A 74 AIEAWINFNKEE---REAFAESLRTSLK 98 (105)
T ss_dssp HHHHHHHTTHHH---HHHHHHHHHHHCC
T ss_pred HHHHHHHcCHHH---HHHHHHHHHHHHH
Confidence 999999999764 4345555555443
No 157
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.95 E-value=2.1e-09 Score=87.18 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=64.5
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcC--CCCCCcccEEEcCCCCHHHHHHHhhhhc-----C---Cccc---CCh
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFET--DWRYRNEIRFSREKLSYPALYGLIHFFY-----S---DRLE---IAV 238 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~--~~~e~~~~~i~l~~v~~~~~~~lL~ylY-----t---g~~~---i~~ 238 (583)
|+++. +|+.|++||.+ |+.|++|+.||.+ ++.|.....|++++|++.+++.+++|+| + +.++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 55554 78999999999 9999999999987 5677778899999999999999999999 5 6676 899
Q ss_pred hhHHHHHHHHhHhc
Q 007949 239 DDMEDLVKICKVCK 252 (583)
Q Consensus 239 ~~~~~ll~~a~~~~ 252 (583)
+++.+++.+|..++
T Consensus 83 ~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 83 EIALELLMAANFLD 96 (97)
T ss_dssp GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhC
Confidence 99999999998764
No 158
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.92 E-value=3.6e-09 Score=92.16 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=86.8
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCC---------
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG--------- 414 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~--------- 414 (583)
|++.. +|+.|.+|+.+ +..|.+|+.|+... + ...|.+++|+..+++.+++|+|.+.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~-~------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL-G------------MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT-C------------CSSEECTTCCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhc-C------------CCceecCCcCHHHHHHHHHHHHHhccCCCccccc
Confidence 66666 78999999998 79999999999852 1 1369999999999999999999876
Q ss_pred -----------------CCCCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHH
Q 007949 415 -----------------LKDIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLI 463 (583)
Q Consensus 415 -----------------~~~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~ 463 (583)
+ .++.+.+.+|+.+|++|++.+|.+.|++++...+..-+++..-.++.
T Consensus 70 ~~~~~~~~~i~~wD~~F~-~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~ 134 (141)
T 1fs1_B 70 ENKEKRTDDIPVWDQEFL-KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFN 134 (141)
T ss_dssp -----------HHHHHHT-CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC
T ss_pred cccccchhhhhHHHHHHH-hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcC
Confidence 4 56778899999999999999999999999999987666665544443
No 159
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.92 E-value=2.6e-09 Score=86.70 Aligned_cols=82 Identities=24% Similarity=0.199 Sum_probs=64.1
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhc-----C---CCC
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY-----T---DGL 415 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iY-----t---~~~ 415 (583)
|++.. +|..|.+||.+ |..|+||++||.+.+++.|+ ....|.++++++.+++.+++|+| + +.+
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~-------~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i 75 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN-------ETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 75 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc-------CCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCC
Confidence 44544 68999999999 99999999999874445554 34689999999999999999999 5 555
Q ss_pred C--CCCHHhHHHHHHHHhccC
Q 007949 416 K--DIDPDQAEEMFDAASRYL 434 (583)
Q Consensus 416 ~--~i~~~~~~~ll~~A~~~~ 434 (583)
+ +++.+++.+|+.+|++|+
T Consensus 76 ~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 76 PEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp CCCCCCGGGHHHHHHHHHHHT
T ss_pred CcCcCCHHHHHHHHHHHhhhC
Confidence 2 278899999999999986
No 160
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.89 E-value=6.3e-09 Score=92.78 Aligned_cols=88 Identities=13% Similarity=0.168 Sum_probs=69.6
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcC-CCC-CCcccEEEcCCCCHHHHHHHhhhhcCCc----------------
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFET-DWR-YRNEIRFSREKLSYPALYGLIHFFYSDR---------------- 233 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~-~~~-e~~~~~i~l~~v~~~~~~~lL~ylYtg~---------------- 233 (583)
|+++. +|+.|++||.+ ++.|+||+.||.+ ++. ++....|++++|++.+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 66765 78999999999 8999999999998 666 6666789999999999999999999987
Q ss_pred ----------ccCChhhHHHHHHHHhHhchHHHHHHHH
Q 007949 234 ----------LEIAVDDMEDLVKICKVCKCESLQRIIE 261 (583)
Q Consensus 234 ----------~~i~~~~~~~ll~~a~~~~~~~l~~~l~ 261 (583)
+.++.+++.+++.+|..+++..|.+.+.
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c 119 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 119 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 5667777777777777776666655554
No 161
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.77 E-value=1.6e-09 Score=96.60 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=66.9
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCC-------
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK------- 416 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~------- 416 (583)
|++.. +|..|.+|+.+ +..|.+|+.||... . ....|.+++|+..+++.+++|+|.+.-.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~--~----------~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDD--C----------VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CCTTSCHHHHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHcc--C----------CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccc
Confidence 55654 78999999998 78999999999862 1 1236899999999999999999998621
Q ss_pred -------------------CCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHhcC
Q 007949 417 -------------------DIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYG 469 (583)
Q Consensus 417 -------------------~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~ 469 (583)
.++.+.+.+|+.+|++|++.+|...|++++...+...|++.+-.++.++..+-
T Consensus 73 ~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 73 VEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp ----------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred ccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 46667899999999999999999999999999998788888888877766554
No 162
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.24 E-value=6.6e-06 Score=73.57 Aligned_cols=118 Identities=20% Similarity=0.210 Sum_probs=85.3
Q ss_pred cEEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCC------
Q 007949 344 DVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK------ 416 (583)
Q Consensus 344 Dv~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~------ 416 (583)
-|++.. +|..|.+++.+ +..|..++.|+...+. +. ..+.....|.+++|+..+++.|++|++...-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~--~~---~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGD--DD---DEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCc--cc---ccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccc
Confidence 466655 68899999998 6889999999985211 00 00012257999999999999999999876521
Q ss_pred ------------------CCCHHhHHHHHHHHhccCchHHHHHHHHHHHhhcccCChhhHHHHHHHHHh
Q 007949 417 ------------------DIDPDQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDM 467 (583)
Q Consensus 417 ------------------~i~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~~~~n~~~~l~~A~~ 467 (583)
.++.+.+.+|+.+|++|++.+|...|+..+...+...+++.+-.++.+...
T Consensus 82 ~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd 150 (169)
T 3v7d_A 82 DDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVND 150 (169)
T ss_dssp ------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCC
T ss_pred cccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 245577888999999999999999999988888866677666555544433
No 163
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.19 E-value=3.3e-06 Score=73.31 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=48.5
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
|+++. +|+.|.+|+.+ +..|++++.||.+.- ...|++++|+..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~ 60 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHK 60 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhc
Confidence 66776 78999999998 899999999997631 3469999999999999999999865
No 164
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.02 E-value=5.7e-06 Score=66.51 Aligned_cols=82 Identities=23% Similarity=0.167 Sum_probs=62.2
Q ss_pred EEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCC---------
Q 007949 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG--------- 414 (583)
Q Consensus 345 v~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~--------- 414 (583)
|++.. +|..|.+++.+ |..|.+++.|+...+.+.|+ ....|.+++|+..+++.+++|+|...
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~-------~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i 74 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN-------ETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 74 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc-------cCCceeCCCCCHHHHHHHHHHHHHccccCCCcccC
Confidence 45555 78999999997 79999999999863233343 23579999999999999999998764
Q ss_pred --CCCCCHHhHHHHHHHHhccCc
Q 007949 415 --LKDIDPDQAEEMFDAASRYLL 435 (583)
Q Consensus 415 --~~~i~~~~~~~ll~~A~~~~~ 435 (583)
. .++.+.+.+|+.+|+++++
T Consensus 75 ~~w-~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 75 PEF-PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCC-CCCTTTHHHHHHHHHHHTC
T ss_pred CCc-ccCHHHHHHHHHHHHHhCc
Confidence 2 4667788999999988764
No 165
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.96 E-value=1.9e-05 Score=63.80 Aligned_cols=80 Identities=23% Similarity=0.241 Sum_probs=65.1
Q ss_pred cEEEEE-CCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCC--------
Q 007949 344 DVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG-------- 414 (583)
Q Consensus 344 Dv~~~~-~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~-------- 414 (583)
-|++.. +|..|.+++.+ |..|.+++.|+.. ++ |+ ....|.+++|+..+++.+++|+|...
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~--~~-e~-------~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~ 73 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEG--PF-RE-------SKGRIELKQFDSHILEKAVEYLNYNLKYSGVSED 73 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHS--ST-TT-------CTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhc--cc-cc-------CCCceecCCcCHHHHHHHHHHHHHhcccCCCccc
Confidence 366666 89999999997 7999999999986 33 32 22479999999999999999999764
Q ss_pred ------CCCCCHHhHHHHHHHHhccCc
Q 007949 415 ------LKDIDPDQAEEMFDAASRYLL 435 (583)
Q Consensus 415 ------~~~i~~~~~~~ll~~A~~~~~ 435 (583)
. .++.+.+.+|+.+|++|++
T Consensus 74 ~~~i~~w-~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 74 DDEIPEF-EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CSSCCCC-CCCHHHHHHHHHHHHHHCC
T ss_pred cccCCCc-cCCHHHHHHHHHHHHHhCc
Confidence 2 4677888999999988764
No 166
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.91 E-value=2.6e-06 Score=75.71 Aligned_cols=114 Identities=11% Similarity=0.067 Sum_probs=45.7
Q ss_pred cEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCCh-hhHH-----HH
Q 007949 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAV-DDME-----DL 244 (583)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~-~~~~-----~l 244 (583)
-|+++. +|+.|.+|+.+ +..|++|+.||.+.. ....|++++|+..+++.+++|+|+..-.-.+ +.-. .-
T Consensus 5 ~v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 5 KIVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp ---CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC----------------------
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 356664 78999999998 889999999998642 2347899999999999999999997631100 0000 00
Q ss_pred HHHHhHhchHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhcC
Q 007949 245 VKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGS 290 (583)
Q Consensus 245 l~~a~~~~~~~l~~~l~~~l~~~~~a~~~~~~~l~~~~~~~i~~~~ 290 (583)
-.+ ..+.-+|+.--..+.+.+...|...+...|.+.|-++++...
T Consensus 81 ~~i-~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~i 125 (160)
T 2p1m_A 81 DDL-KAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMI 125 (160)
T ss_dssp ---------------------CHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred chh-hHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 000 011122232111244555666777777777777777776654
No 167
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.84 E-value=4.7e-05 Score=61.41 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=63.6
Q ss_pred cEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCCCCcccEEEcCCCCHHHHHHHhhhhcCCc--------------ccC
Q 007949 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR--------------LEI 236 (583)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~--------------~~i 236 (583)
-|+++. +|..|.+++.+ +..|.+++.||.+++ +.....|++++|+..+++.+++|+|... ..+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 466776 88999999997 899999999998755 4445689999999999999999999743 245
Q ss_pred ChhhHHHHHHHHhHh
Q 007949 237 AVDDMEDLVKICKVC 251 (583)
Q Consensus 237 ~~~~~~~ll~~a~~~ 251 (583)
+.+.+.+++.+|..+
T Consensus 83 d~~~lfeLi~AAnyL 97 (99)
T 1hv2_A 83 PTEMSLELLLAADYL 97 (99)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 666788888888655
No 168
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.73 E-value=5.3e-05 Score=60.78 Aligned_cols=78 Identities=12% Similarity=0.093 Sum_probs=60.6
Q ss_pred EEEEE-CCEeEehhHHHHhhccHHHHHhhcCC--CCCCcccEEEcCCCCHHHHHHHhhhhcCCc-----------ccCCh
Q 007949 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETD--WRYRNEIRFSREKLSYPALYGLIHFFYSDR-----------LEIAV 238 (583)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~--~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~-----------~~i~~ 238 (583)
|+++. +|..|.+++.+ +..|.+++.||.+. +.+.....|++++|+..+++.+++|+|... ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 55665 78999999997 89999999999852 245555689999999999999999999643 35677
Q ss_pred hhHHHHHHHHhHh
Q 007949 239 DDMEDLVKICKVC 251 (583)
Q Consensus 239 ~~~~~ll~~a~~~ 251 (583)
+.+.+++.+|..+
T Consensus 82 ~~l~eLi~AAnyL 94 (96)
T 2fnj_C 82 EIALELLMAANFL 94 (96)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 7889999888765
No 169
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.65 E-value=0.00022 Score=58.39 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=73.2
Q ss_pred cEEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH-
Q 007949 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD- 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~- 421 (583)
-|++-|+|..|...+..|.... .+|.+||++...+..... ....+-+ +-++..|+.+|.|+.+|.+ .++.+
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d-----~~~~~fi-DRdp~~F~~IL~~lr~g~l-~~p~~~ 79 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKD-----ETGAYLI-DRDPTYFGPVLNYLRHGKL-VINKDL 79 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBC-----TTSCEEE-CSCHHHHHHHHHHHHHSCC-CCCTTS
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCC-----CCceEEe-cCChHHHHHHHHHhCCCee-CCCCCC
Confidence 4788999999999999997764 588999986211211100 1123434 5789999999999999998 45443
Q ss_pred hHHHHHHHHhccCchHHHHHHHHHHHh
Q 007949 422 QAEEMFDAASRYLLFPLKRAVADVLLL 448 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~~~c~~~l~~ 448 (583)
....++..|.+|++++|++.|.+.+.+
T Consensus 80 ~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 80 AEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 247899999999999999999987754
No 170
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.44 E-value=0.00018 Score=59.23 Aligned_cols=83 Identities=23% Similarity=0.153 Sum_probs=62.7
Q ss_pred cEEEE-ECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCC--------
Q 007949 344 DVCVR-VDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDG-------- 414 (583)
Q Consensus 344 Dv~~~-~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~-------- 414 (583)
-|++. .+|..|.+.+.+ +..|..++.|+...+.+.|+ ....|.+++|+..+++.+++|++...
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~-------~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 89 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN-------ETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE 89 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccc-------cCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCC
Confidence 46666 378999999995 68999999999863333333 22479999999999999999998653
Q ss_pred ---CCCCCHHhHHHHHHHHhccCc
Q 007949 415 ---LKDIDPDQAEEMFDAASRYLL 435 (583)
Q Consensus 415 ---~~~i~~~~~~~ll~~A~~~~~ 435 (583)
. .++.+.+.+|+.+|++|.+
T Consensus 90 i~~w-~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 90 IPEF-PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCC-CCCHHHHHHHHHHHHHHTC
T ss_pred CCCc-ccCHHHHHHHHHHHHHhCc
Confidence 2 4677889999999998864
No 171
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.44 E-value=0.00079 Score=55.10 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=68.1
Q ss_pred cEEEEECCEeEehhHHHHhhcc-HHHHHhhcCCCC----CCcccEEEcCCCCHHHHHHHhhhhcCCcccCChhh-HHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARS-VFFRRKFETDWR----YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDD-MEDLV 245 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S-~~f~~~~~~~~~----e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~-~~~ll 245 (583)
-|++.|||..|...+..|.... .+|..||.+.+. ......+-+ +-+|..|..+|+|+.+|.+.++.+. ...++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 5678899999999999998765 478899876521 112234444 6899999999999999999876653 46777
Q ss_pred HHHhHhchHHHHHHHHH
Q 007949 246 KICKVCKCESLQRIIEK 262 (583)
Q Consensus 246 ~~a~~~~~~~l~~~l~~ 262 (583)
.-|+.++++.|.+.|..
T Consensus 86 ~Ea~fy~l~~L~~~l~~ 102 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKD 102 (107)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 77888888777777764
No 172
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.12 E-value=0.0025 Score=56.77 Aligned_cols=61 Identities=18% Similarity=0.272 Sum_probs=47.1
Q ss_pred cEEEEE-CCEeEehhHHHHhhccHHHHHhhcCCCC----CCcccEEEcCCCCHHHHHHHhhhhcCCc
Q 007949 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWR----YRNEIRFSREKLSYPALYGLIHFFYSDR 233 (583)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~~~----e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (583)
-|+++. +|..|.+++.+ +..|..++.|+..... +.....|++++|+..+++.+++|+|...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~ 73 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHR 73 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTT
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcc
Confidence 566665 78999999998 7789999999975322 1223679999999999999999999743
No 173
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.01 E-value=0.0013 Score=54.04 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=59.8
Q ss_pred cEEEEE-CCEeEehhHHHHhhccHHHHHhhcCC--CCCCcccEEEcCCCCHHHHHHHhhhhcCCc-----------ccCC
Q 007949 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETD--WRYRNEIRFSREKLSYPALYGLIHFFYSDR-----------LEIA 237 (583)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~a~S~~f~~~~~~~--~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~-----------~~i~ 237 (583)
-|+++. +|..|.+++.+ +..|..++.|+.+. +.+.....|++++|+..+++.+++|+|... ..++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 466663 78999999994 78999999999852 334445689999999999999999998632 3567
Q ss_pred hhhHHHHHHHHhHh
Q 007949 238 VDDMEDLVKICKVC 251 (583)
Q Consensus 238 ~~~~~~ll~~a~~~ 251 (583)
...+.+|+.+|..+
T Consensus 97 ~~~lfeLi~AAnyL 110 (112)
T 1vcb_B 97 PEIALELLMAANFL 110 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77888888888765
No 174
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.50 E-value=0.00031 Score=57.43 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCccCchhHHHHHHHHHhhhcccCCCccccchhhHHHHHHHhcccccCCC
Q 007949 262 KELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNGICKLSSSVEAMHISDHVDD 341 (583)
Q Consensus 262 ~~l~~~~~a~~~~~~~l~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~l~~l~~~~~ 341 (583)
||+.++.+|..++++.|.+.|.+|+.+||. ++ ...++|..+|.+.+..+|++
T Consensus 12 NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~---------------~v----~~~~eFl~L~~~~L~~lL~s--------- 63 (105)
T 2eqx_A 12 NCLQVMWLADRHSDPELYTAAKHCAKTHLA---------------QL----QNTEEFLHLPHRLLTDIISD--------- 63 (105)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCH---------------HH----HTSHHHHHSCHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---------------HH----HhcccHhhCCHHHHHHHHcC---------
Confidence 899999999999999999999999999985 12 14678999999999999987
Q ss_pred CCcEEEEECCEEEEeeeeeee----ccCHHHHHHHcCc
Q 007949 342 LADVCVRVDKKIFRCHQVVLA----SRSEYFKARLSRM 375 (583)
Q Consensus 342 ~~Dv~~~~~~~~~~ahr~iL~----~~S~~F~~~~~~~ 375 (583)
| +..+...|.|...|+. .|..++..++..+
T Consensus 64 --d--v~~E~~vf~av~~Wv~~d~~~R~~~~~~Ll~~V 97 (105)
T 2eqx_A 64 --G--VPCSQNPTEAIEAWINFNKEEREAFAESLRTSL 97 (105)
T ss_dssp --C--EETTSCHHHHHHHHHHTTHHHHHHHHHHHHHHC
T ss_pred --C--CCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 6 5556777888877763 4667888888753
No 175
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.00 E-value=0.013 Score=52.96 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=71.1
Q ss_pred cEEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHHh
Q 007949 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~~ 422 (583)
=|.+-|+|..|...+..|.... .+|.+||.+...+..... ....+-+ +=++..|+.+|.|+.+|.+ .++.+.
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~D-----e~geyFI-DRDP~~F~~ILnyLRtG~L-~lP~~~ 85 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKD-----ETGAYLI-DRDPTYFGPVLNYLRHGKL-VINKDL 85 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BC-----TTCCEEE-CSCSTTHHHHHHHHHHSCC-CCCTTS
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccC-----CCccEEe-cCChHHHHHHHHHhcCCcc-CCCCCC
Confidence 3778899999999999997653 488899875211211000 1123333 4588999999999999998 554432
Q ss_pred -HHHHHHHHhccCchHHHHHHHHHHHhh
Q 007949 423 -AEEMFDAASRYLLFPLKRAVADVLLLH 449 (583)
Q Consensus 423 -~~~ll~~A~~~~~~~l~~~c~~~l~~~ 449 (583)
...++..|.+|++++|.+.|.+.+.+.
T Consensus 86 ~~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 86 AEEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 367899999999999999999888654
No 176
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=94.85 E-value=0.044 Score=49.54 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=65.9
Q ss_pred cEEEEECCEeEehhHHHHhhcc-HHHHHhhcCCCC--C--CcccEEEcCCCCHHHHHHHhhhhcCCcccCChhh-HHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARS-VFFRRKFETDWR--Y--RNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDD-MEDLV 245 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S-~~f~~~~~~~~~--e--~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~-~~~ll 245 (583)
=|++.|||..|...+..|.... .+|..||.+.+. . .....+-+ +-+|..|..||+|+-+|.+.++.+. ...++
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~ 91 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 91 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHH
Confidence 4567899999999999997654 378888876421 1 12234444 5789999999999999999876653 35677
Q ss_pred HHHhHhchHHHHHHHHHHH
Q 007949 246 KICKVCKCESLQRIIEKEL 264 (583)
Q Consensus 246 ~~a~~~~~~~l~~~l~~~l 264 (583)
.-|+.+++..|.+.|...+
T Consensus 92 eEA~FygL~~Lv~~l~~~i 110 (202)
T 3drx_A 92 EEAEFYNITSLIKLVKDKI 110 (202)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCcHHHHHHHHHHH
Confidence 7777777777777766443
No 177
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=90.38 E-value=0.22 Score=40.89 Aligned_cols=81 Identities=14% Similarity=0.024 Sum_probs=55.0
Q ss_pred cEEEEECCEeEehhHHHHhhcc-HHHHHhhcCCC-CCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChh-hHHHHHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARS-VFFRRKFETDW-RYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVKIC 248 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S-~~f~~~~~~~~-~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~~a 248 (583)
=|++.|||..|...+..|.... ..|..|+.+.. .......+-+ +=+|..|..||+|+-+|.+.++.+ ....++.-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 4678899999999999997653 24556665421 1122344544 578999999999999999977764 344555555
Q ss_pred hHhch
Q 007949 249 KVCKC 253 (583)
Q Consensus 249 ~~~~~ 253 (583)
+.+++
T Consensus 85 ~fy~i 89 (115)
T 3kvt_A 85 EFWGL 89 (115)
T ss_dssp HHHTC
T ss_pred HHhCC
Confidence 55543
No 178
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=89.10 E-value=0.25 Score=41.13 Aligned_cols=90 Identities=13% Similarity=0.089 Sum_probs=59.3
Q ss_pred cEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH-h
Q 007949 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD-Q 422 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~-~ 422 (583)
-|.+-|+|..|..-+..|..... .++...+.+.-. ......+-+ +=++..|+.+|.|+.+|.+ .++.+ .
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~-----~~~~g~~Fi-DRdp~~F~~ILnflR~G~l-~~p~~~~ 83 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFF-----NEDTKEYFF-DRDPEVFRCVLNFYRTGKL-HYPRYEC 83 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTB-----CSSSCSEEE-CSCHHHHHHHHHHHHHSCB-CCCTTSC
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccc-----cCCCCcEEE-cCChHHHHHHHHHHhcCCC-CCCCCcC
Confidence 47888999999999988854321 223221111000 011223434 3489999999999999998 45443 4
Q ss_pred HHHHHHHHhccCchHHH-HHHH
Q 007949 423 AEEMFDAASRYLLFPLK-RAVA 443 (583)
Q Consensus 423 ~~~ll~~A~~~~~~~l~-~~c~ 443 (583)
+..++..|++|+++.+. ..|+
T Consensus 84 ~~~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 84 ISAYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHHHHHHHTTCCGGGBCHHH
T ss_pred HHHHHHHHHHcCCChHHHHHHH
Confidence 68899999999998873 4443
No 179
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=87.11 E-value=0.58 Score=38.85 Aligned_cols=81 Identities=10% Similarity=0.084 Sum_probs=54.9
Q ss_pred cEEEEECCEeEehhHHHHhhccHHHHHhhcCC----CCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChh-hHHHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETD----WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVK 246 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~----~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~ 246 (583)
-|++.|||..|..-+..|..... .+|... ........+-+ +=+|..|..||+|+-+|.+.++.+ .+..++.
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 56788999999999999965422 223221 01112234444 469999999999999999987665 3566777
Q ss_pred HHhHhchHHH
Q 007949 247 ICKVCKCESL 256 (583)
Q Consensus 247 ~a~~~~~~~l 256 (583)
-|+.+++..+
T Consensus 90 Ea~fy~i~~l 99 (124)
T 1s1g_A 90 ELAFYGILPE 99 (124)
T ss_dssp HHHHTTCCGG
T ss_pred HHHHcCCChH
Confidence 7777766544
No 180
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=85.90 E-value=0.82 Score=38.81 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=53.4
Q ss_pred cEEEEECCEeEehhHHHHhhccHHHHHhhcCC----CCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChh-hHHHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETD----WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVK 246 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~----~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~ 246 (583)
-|++.|||..|...+..|..... .||... ........+-+ +=++..|..||+|+-+|.+.++.+ .+..+++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 56788999999999999975422 233221 01112344555 569999999999999999877655 3556666
Q ss_pred HHhHhchHH
Q 007949 247 ICKVCKCES 255 (583)
Q Consensus 247 ~a~~~~~~~ 255 (583)
-|+.+++..
T Consensus 112 Ea~fy~i~~ 120 (140)
T 2nz0_B 112 ELAFYGILP 120 (140)
T ss_dssp HHHHHTCCG
T ss_pred HHHHcCCCh
Confidence 666665444
No 181
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=84.86 E-value=0.53 Score=37.44 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=56.4
Q ss_pred EEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcC-CCCCCCCH-H
Q 007949 345 VCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDP-D 421 (583)
Q Consensus 345 v~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt-~~~~~i~~-~ 421 (583)
|++-|+|..|...+..|.... ..+.+|++....+.. ....+-+ +=++..|+.+|.|+.+ |.+ .++. -
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~--------~~~eyFi-DRdp~~F~~ILnflR~~G~l-~~p~~~ 72 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDP--------LRNEYFF-DRNRPSFDAILYFYQSGGRL-RRPVNV 72 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEET--------TTTEEEE-CSCSTTHHHHHHHHHTTSCC-CCCTTS
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCC--------CceeEEE-cCChHHHHHHHHHHhcCCcc-cCCCCC
Confidence 678899999999988885432 233334432111111 1123444 4578999999999998 887 4443 3
Q ss_pred hHHHHHHHHhccCchHHH
Q 007949 422 QAEEMFDAASRYLLFPLK 439 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~ 439 (583)
.+..++..|.+|+++++.
T Consensus 73 ~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 73 PLDVFSEEIKFYELGENA 90 (100)
T ss_dssp CHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHHcCCCHHH
Confidence 467899999999997744
No 182
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=84.43 E-value=0.32 Score=39.84 Aligned_cols=86 Identities=14% Similarity=0.081 Sum_probs=59.5
Q ss_pred cEEEEECCEEEEeeeeeeeccC-HHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH-
Q 007949 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD- 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S-~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~- 421 (583)
-|++-|+|..|...+..|.... ..+.+|++....+.. ....+-+ +=++..|+.+|.|+.+|.+ .++.+
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~--------~~g~~Fi-DRdp~~F~~ILnylR~G~l-~~p~~~ 75 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDP--------VLNEYFF-DRHPGVFAQIINYYRSGKL-HYPTDV 75 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEET--------TTTEEEE-CSCTTTHHHHHHHHHHSCB-CCCSSS
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCC--------CCCcEEE-ecChHHHHHHHHHhcCCCC-CCCCcc
Confidence 4788999999999998886543 345555553111111 1223433 3578999999999999998 45442
Q ss_pred hHHHHHHHHhccCchHHH
Q 007949 422 QAEEMFDAASRYLLFPLK 439 (583)
Q Consensus 422 ~~~~ll~~A~~~~~~~l~ 439 (583)
....++..|.+|++++..
T Consensus 76 ~~~~~~~Ea~fy~i~~~~ 93 (115)
T 3kvt_A 76 CGPLFEEELEFWGLDSNQ 93 (115)
T ss_dssp CHHHHHHHHHHHTCCGGG
T ss_pred cHHHHHHHHHHhCCChHH
Confidence 467899999999997743
No 183
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=84.34 E-value=0.76 Score=36.92 Aligned_cols=79 Identities=8% Similarity=0.083 Sum_probs=53.0
Q ss_pred EEEEECCEeEehhHHHHhhccHHHHHhhcCC----CCCCcccEEEcCCCCHHHHHHHhhhhcCCcccCChh-hHHHHHHH
Q 007949 173 VVFYVQGRPIEAHRVILSARSVFFRRKFETD----WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVKI 247 (583)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~a~S~~f~~~~~~~----~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~~ 247 (583)
|++.|||..|...+..|..... .||... ........+-+ +=+|..|..||+|+-+|.+.++.+ .+..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6788999999999999975432 223221 01112344555 468999999999999999877665 35666666
Q ss_pred HhHhchHH
Q 007949 248 CKVCKCES 255 (583)
Q Consensus 248 a~~~~~~~ 255 (583)
|+.+++..
T Consensus 78 a~fy~i~~ 85 (105)
T 1nn7_A 78 LAFFGLIP 85 (105)
T ss_dssp HHHHTCCS
T ss_pred HHHcCCCH
Confidence 66665443
No 184
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=84.21 E-value=0.47 Score=40.35 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=57.0
Q ss_pred cEEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH-h
Q 007949 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD-Q 422 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~-~ 422 (583)
-|++-|+|..|...+..|.... ..|+...+.+.-. ......+-+ +=++..|+.+|+|+.+|.+ .++.+ .
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~-----~~~~g~yFi-DRdp~~F~~ILnflR~G~l-~~p~~~~ 105 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFF-----NEDTKEYFF-DRDPEVFRCVLNFYRTGKL-HYPRYEC 105 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSE-----ETTTTEEEE-CSCHHHHHHHHHHHHHSSB-CCCTTSC
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccc-----cCCCCeEEE-eCCcHHHHHHHHHHhcCCc-CCCCCcC
Confidence 5788899999999998885432 1233321111000 001233444 3589999999999999998 45443 4
Q ss_pred HHHHHHHHhccCchHH
Q 007949 423 AEEMFDAASRYLLFPL 438 (583)
Q Consensus 423 ~~~ll~~A~~~~~~~l 438 (583)
+..++..|++|+++.+
T Consensus 106 ~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 106 ISAYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHcCCChH
Confidence 7889999999999886
No 185
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=83.14 E-value=0.76 Score=36.52 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=52.3
Q ss_pred EEEEECCEeEehhHHHHhhccH-HHHHhhcCC-CCCCcccEEEcCCCCHHHHHHHhhhhcC-CcccCChh-hHHHHHHHH
Q 007949 173 VVFYVQGRPIEAHRVILSARSV-FFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIAVD-DMEDLVKIC 248 (583)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~a~S~-~f~~~~~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~~~-~~~~ll~~a 248 (583)
|++.|||..|...+..|...-. .+..|+... .-......+-+ +=+|..|..||+|+-+ |.+.++.+ .+..++.-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 6788999999999999864321 233333211 11112334544 5689999999999999 89876655 345566666
Q ss_pred hHhchH
Q 007949 249 KVCKCE 254 (583)
Q Consensus 249 ~~~~~~ 254 (583)
+.+++.
T Consensus 82 ~fy~i~ 87 (100)
T 1t1d_A 82 KFYELG 87 (100)
T ss_dssp HHTTCC
T ss_pred HHcCCC
Confidence 666543
No 186
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=68.51 E-value=0.93 Score=36.40 Aligned_cols=89 Identities=12% Similarity=0.079 Sum_probs=56.5
Q ss_pred EEEEECCEEEEeeeeeeeccCHHHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcCCCCCCCCHH-hH
Q 007949 345 VCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPD-QA 423 (583)
Q Consensus 345 v~~~~~~~~~~ahr~iL~~~S~~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt~~~~~i~~~-~~ 423 (583)
|++-|+|..|...+..|..... .|+...+.+.-. ......+-+ +=++..|+.+|.|+.+|.+ .++.+ .+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~-----~~~~~~~Fi-DRdp~~F~~ILnflR~g~l-~~p~~~~~ 71 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFY-----HPETQQYFF-DRDPDIFRHILNFYRTGKL-HYPRHECI 71 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGE-----EGGGTEEEE-CSCTTTHHHHHHHHHHSCB-CCCTTSCH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccc-----cCCCCcEEE-eCCcHHHHHHHHHHhcCCC-CCCCCcCH
Confidence 6788999999998887754321 122221010000 001123334 3488999999999999998 45443 46
Q ss_pred HHHHHHHhccCchHHH-HHHH
Q 007949 424 EEMFDAASRYLLFPLK-RAVA 443 (583)
Q Consensus 424 ~~ll~~A~~~~~~~l~-~~c~ 443 (583)
..++..|++|+++.+. ..|+
T Consensus 72 ~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 72 SAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHHHHHHHTCCSCCBCHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 7899999999998863 4443
No 187
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=35.24 E-value=37 Score=18.39 Aligned_cols=22 Identities=14% Similarity=0.309 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCcHHHHHHHHHH
Q 007949 459 CHWLILSDMYGVFKVREYCLEV 480 (583)
Q Consensus 459 ~~~l~~A~~~~~~~L~~~c~~~ 480 (583)
+.++.+|..+..++|...|+.-
T Consensus 2 ckvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhc
Confidence 3567789999999999998764
No 188
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=32.10 E-value=32 Score=21.47 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=15.7
Q ss_pred HHHHHHHHcCCHHHHHHHHH
Q 007949 35 GDVFEASRAGDVDRLRYILE 54 (583)
Q Consensus 35 ~~L~~A~~~g~~~~v~~Ll~ 54 (583)
.++..||..|+++.++.|=.
T Consensus 15 QqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHH
Confidence 45788999999998887643
No 189
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=23.88 E-value=55 Score=34.10 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=51.4
Q ss_pred cEEEEECCEeEehhHHHHhhccHH-HHHhhcC-CCCCCcccEEEcCCCCHHHHHHHhhhhcC-CcccCChhh-HHHHHHH
Q 007949 172 DVVFYVQGRPIEAHRVILSARSVF-FRRKFET-DWRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIAVDD-MEDLVKI 247 (583)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~a~S~~-f~~~~~~-~~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~~~~-~~~ll~~ 247 (583)
=|++.|||..|...+..|...-.- +..++.. ..-+....+.-+ +=+|..|..+|+|+.| |++..+.+- ...+.+-
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E 131 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE 131 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHH
Confidence 466779999999999988643211 1111111 011122334444 5799999999999999 998776553 4455666
Q ss_pred HhHhchH
Q 007949 248 CKVCKCE 254 (583)
Q Consensus 248 a~~~~~~ 254 (583)
|+.++++
T Consensus 132 ~~f~~i~ 138 (514)
T 2r9r_B 132 IRFYELG 138 (514)
T ss_dssp HHHTTCC
T ss_pred HHhcCCC
Confidence 6666543
No 190
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=21.21 E-value=61 Score=33.78 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=55.0
Q ss_pred cEEEEECCEEEEeeeeeeeccCH-HHHHHHcCccccccCCCCCCCCCCCeeecCCCCHHHHHHHhhhhcC-CCCCCCCHH
Q 007949 344 DVCVRVDKKIFRCHQVVLASRSE-YFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDPD 421 (583)
Q Consensus 344 Dv~~~~~~~~~~ahr~iL~~~S~-~F~~~~~~~~~~~e~~~~~~~~~~~~i~l~~v~~~~~~~~l~~iYt-~~~~~i~~~ 421 (583)
-|.+-|+|..|...+..|..... .+..++... .+... ...+.-+ |=++..|+.+|.|+.+ |++ ..+.+
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~-~~~~~-------~~~~~f~-DR~~~~F~~IL~~~r~~g~l-~~p~~ 122 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRM-RYFDP-------LRNEYFF-DRNRPSFDAILYYYQSGGRL-RRPVN 122 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHG-GGEET-------TTTEEEE-CSCHHHHHHHHHHHHHTSCC-CCCTT
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCC-cccCC-------CCCCEEE-cCChHHHHHHHHHHhcCCcc-ccCCc
Confidence 47788999999999888754321 112222211 11111 1123334 4589999999999999 888 45443
Q ss_pred h-HHHHHHHHhccCchHHH
Q 007949 422 Q-AEEMFDAASRYLLFPLK 439 (583)
Q Consensus 422 ~-~~~ll~~A~~~~~~~l~ 439 (583)
. ...+...|++|+++++.
T Consensus 123 ~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 123 VPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp SCHHHHHHHHHHTTCCHHH
T ss_pred ccHHHHHHHHHhcCCCHHH
Confidence 3 45678899999997754
Done!