Query 007950
Match_columns 583
No_of_seqs 461 out of 2812
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 14:29:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 6.6E-44 2.3E-48 364.2 9.3 247 127-413 15-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 9.3E-43 3.2E-47 351.1 4.5 235 127-402 14-255 (256)
3 3hqi_A Speckle-type POZ protei 100.0 9.1E-30 3.1E-34 263.2 5.3 205 64-316 105-311 (312)
4 3htm_A Speckle-type POZ protei 99.9 2.2E-26 7.6E-31 217.0 6.7 143 137-316 27-171 (172)
5 4eoz_A Speckle-type POZ protei 99.9 5.6E-24 1.9E-28 195.0 2.4 125 137-297 18-144 (145)
6 2if5_A Zinc finger and BTB dom 99.8 1.6E-21 5.4E-26 174.0 3.4 108 130-268 11-120 (120)
7 2z8h_A Transcription regulator 99.8 2.3E-21 7.9E-26 177.6 4.3 118 127-277 19-138 (138)
8 2vkp_A BTB/POZ domain-containi 99.8 1.1E-20 3.8E-25 165.3 7.1 99 139-269 3-107 (109)
9 1r29_A B-cell lymphoma 6 prote 99.8 4.4E-21 1.5E-25 172.9 3.8 109 129-269 14-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 99.8 9.3E-21 3.2E-25 175.3 5.8 111 127-268 30-144 (144)
11 3ohu_A Transcription regulator 99.8 7.2E-21 2.5E-25 171.0 2.9 109 126-267 14-125 (125)
12 3b84_A Zinc finger and BTB dom 99.8 8.1E-21 2.8E-25 169.7 2.5 105 130-269 10-116 (119)
13 2yy9_A Zinc finger and BTB dom 99.8 1E-20 3.5E-25 172.9 2.3 110 130-275 11-122 (135)
14 2vpk_A Myoneurin; transcriptio 99.8 1.5E-20 5E-25 166.8 2.4 106 131-269 9-116 (116)
15 2ihc_A Transcription regulator 99.8 1.3E-20 4.4E-25 169.6 2.1 107 130-268 15-123 (124)
16 1buo_A POZ domain, protein (pr 99.8 5E-20 1.7E-24 164.9 2.3 104 130-269 14-119 (121)
17 3m5b_A Zinc finger and BTB dom 99.8 1.9E-19 6.6E-24 161.4 5.5 99 129-269 17-117 (119)
18 3ga1_A Nucleus accumbens-assoc 99.8 1E-19 3.6E-24 164.6 2.3 108 128-269 17-126 (129)
19 2q81_A MIZ-1 protein; BTB/POZ 99.8 3.1E-20 1.1E-24 165.9 -1.3 105 128-268 11-117 (119)
20 3fkc_A Transcriptional regulat 99.7 4.9E-18 1.7E-22 151.2 3.3 97 129-261 16-115 (116)
21 2eqx_A Kelch repeat and BTB do 99.7 1.4E-17 4.7E-22 146.2 5.5 96 267-375 4-99 (105)
22 2ast_A S-phase kinase-associat 99.2 7E-12 2.4E-16 117.8 3.8 108 147-286 3-143 (159)
23 2xn4_A Kelch-like protein 2; s 99.1 1.9E-10 6.5E-15 116.0 11.5 116 432-572 16-164 (302)
24 3ii7_A Kelch-like protein 7; p 99.1 2.7E-10 9.1E-15 115.1 11.6 122 427-573 6-159 (306)
25 4asc_A Kelch repeat and BTB do 99.1 3.9E-10 1.3E-14 114.7 10.6 117 432-573 99-253 (315)
26 2woz_A Kelch repeat and BTB do 99.0 6.4E-10 2.2E-14 113.3 10.5 118 432-574 110-264 (318)
27 3ii7_A Kelch-like protein 7; p 99.0 1.1E-09 3.8E-14 110.5 12.0 116 432-572 56-209 (306)
28 2vpj_A Kelch-like protein 12; 99.0 1.2E-09 4.1E-14 109.8 11.6 121 427-572 9-168 (301)
29 1zgk_A Kelch-like ECH-associat 99.0 1.1E-09 3.8E-14 111.1 11.4 116 432-572 71-224 (308)
30 1zgk_A Kelch-like ECH-associat 99.0 1.3E-09 4.4E-14 110.6 11.7 116 432-572 122-271 (308)
31 2xn4_A Kelch-like protein 2; s 99.0 1.5E-09 5.1E-14 109.4 11.9 116 432-572 109-260 (302)
32 4asc_A Kelch repeat and BTB do 99.0 1.2E-09 4E-14 111.1 11.0 106 442-572 68-205 (315)
33 2vpj_A Kelch-like protein 12; 99.0 1.8E-09 6.3E-14 108.5 12.1 116 432-572 113-262 (301)
34 2woz_A Kelch repeat and BTB do 98.9 3.4E-09 1.1E-13 107.9 11.6 115 432-572 16-167 (318)
35 2zwa_A Leucine carboxyl methyl 98.9 2.5E-10 8.6E-15 130.2 2.9 185 350-572 315-559 (695)
36 4ajy_C Transcription elongatio 98.9 1.6E-09 5.4E-14 93.4 5.8 72 153-256 13-97 (97)
37 2uvk_A YJHT; unknown function, 98.7 6E-08 2E-12 99.9 10.9 116 432-572 20-209 (357)
38 2uvk_A YJHT; unknown function, 98.7 9.4E-08 3.2E-12 98.4 11.7 109 441-574 168-327 (357)
39 1fs1_B SKP1, cyclin A/CDK2-ass 98.6 1.4E-08 4.7E-13 93.5 3.3 96 147-279 4-128 (141)
40 2p1m_A SKP1-like protein 1A; F 98.6 8.3E-09 2.8E-13 96.9 1.3 99 153-287 15-143 (160)
41 2zwa_A Leucine carboxyl methyl 98.4 3E-07 1E-11 104.7 9.4 116 433-572 453-616 (695)
42 1k3i_A Galactose oxidase precu 98.1 2.1E-06 7.3E-11 96.5 6.9 88 441-538 219-340 (656)
43 1k3i_A Galactose oxidase precu 98.0 1.4E-05 4.6E-10 90.0 10.3 112 439-573 367-531 (656)
44 1hv2_A Elongin C, ELC1; protei 97.8 2.7E-05 9.2E-10 67.2 6.0 77 147-256 6-99 (99)
45 2fnj_C Transcription elongatio 97.7 2.9E-05 1E-09 66.6 5.0 72 153-256 12-96 (96)
46 3drz_A BTB/POZ domain-containi 97.6 0.00011 3.8E-09 64.1 6.6 93 146-269 7-106 (107)
47 3v7d_A Suppressor of kinetocho 97.6 6.4E-05 2.2E-09 71.0 5.3 106 146-283 8-147 (169)
48 1by2_A MAC-2 binding protein; 97.6 3.4E-06 1.2E-10 75.4 -3.4 60 23-96 33-92 (119)
49 2oya_A Macrophage receptor mar 97.1 1.5E-05 5E-10 69.3 -4.6 57 23-96 28-84 (102)
50 1vcb_B Protein (elongin C); tu 96.7 0.001 3.4E-08 58.7 3.7 72 153-256 28-112 (112)
51 2jop_A T-cell surface glycopro 96.4 0.00026 9.1E-09 64.0 -2.0 56 23-97 55-118 (131)
52 3drx_A BTB/POZ domain-containi 95.7 0.01 3.5E-07 57.4 5.3 93 146-269 13-112 (202)
53 3kvt_A Potassium channel prote 94.6 0.051 1.8E-06 47.9 5.9 93 146-269 6-104 (115)
54 2xrc_A Human complement factor 94.3 0.0044 1.5E-07 68.9 -2.0 57 23-93 121-178 (565)
55 1s1g_A Potassium voltage-gated 93.5 0.19 6.6E-06 44.7 7.7 52 209-263 52-104 (124)
56 1nn7_A Potassium channel KV4.2 93.1 0.12 4E-06 44.7 5.4 53 209-264 39-92 (105)
57 2nz0_B Potassium voltage-gated 93.0 0.24 8.3E-06 45.0 7.6 54 208-264 73-127 (140)
58 2ja4_A T-cell surface glycopro 92.5 0.0048 1.6E-07 53.2 -4.3 36 23-58 31-68 (101)
59 1t1d_A Protein (potassium chan 88.3 0.62 2.1E-05 39.8 5.3 50 208-260 40-90 (100)
60 3ivv_A Speckle-type POZ protei 73.4 0.51 1.8E-05 42.3 -0.9 37 63-99 108-144 (145)
61 1lb6_A TNF receptor-associated 68.6 0.9 3.1E-05 41.4 -0.4 35 64-100 124-158 (160)
62 4ghu_A TNF receptor-associated 63.8 1.5 5.2E-05 41.8 0.2 35 64-100 155-189 (198)
63 4gjh_A TNF receptor-associated 58.9 2 6.7E-05 40.0 -0.1 35 64-98 139-173 (178)
64 2vkp_A BTB/POZ domain-containi 58.4 6.3 0.00021 32.8 3.1 34 271-308 76-109 (109)
65 2eqx_A Kelch repeat and BTB do 56.0 4.7 0.00016 34.1 1.9 33 236-269 6-38 (105)
66 2gkw_A TNF receptor-associated 55.9 2.4 8.1E-05 40.0 -0.0 33 64-98 155-187 (192)
67 1d00_A Tumor necrosis factor r 55.7 2.1 7.1E-05 39.1 -0.5 34 64-98 133-166 (168)
68 1ca9_A TRAF2, protein (TNF rec 49.7 3.3 0.00011 38.9 -0.2 33 64-98 157-190 (192)
69 2foj_A Ubiquitin carboxyl-term 49.4 2.9 9.8E-05 37.6 -0.6 34 64-97 114-147 (155)
70 1flk_A TNF receptor associated 48.8 3.7 0.00013 39.8 0.1 34 64-99 191-224 (228)
71 3i3n_A Kelch-like protein 11; 44.5 33 0.0011 33.6 6.3 94 238-336 139-251 (279)
72 3htm_A Speckle-type POZ protei 39.0 11 0.00037 33.9 1.5 33 238-272 132-164 (172)
73 1r29_A B-cell lymphoma 6 prote 38.1 16 0.00056 31.2 2.5 33 271-307 94-126 (127)
74 2z8h_A Transcription regulator 38.0 8.7 0.0003 33.7 0.7 35 271-309 100-134 (138)
75 1z8g_A Serine protease hepsin; 37.7 1.7 5.8E-05 45.2 -4.7 26 23-48 30-55 (372)
76 2yy9_A Zinc finger and BTB dom 33.8 10 0.00035 33.1 0.5 38 271-312 86-123 (135)
77 2r9r_B Paddle chimera voltage 31.1 41 0.0014 36.5 4.8 50 208-260 91-141 (514)
78 1buo_A POZ domain, protein (pr 31.1 33 0.0011 29.1 3.3 33 271-307 88-120 (121)
79 3b84_A Zinc finger and BTB dom 29.7 17 0.00057 30.9 1.1 33 271-307 85-117 (119)
80 2q81_A MIZ-1 protein; BTB/POZ 29.6 29 0.00098 29.4 2.7 31 271-305 87-117 (119)
81 2vpk_A Myoneurin; transcriptio 28.4 31 0.0011 28.9 2.7 31 271-305 85-115 (116)
82 3hqi_A Speckle-type POZ protei 28.2 20 0.00068 35.7 1.5 33 238-272 272-304 (312)
83 2if5_A Zinc finger and BTB dom 25.9 39 0.0013 28.3 2.9 30 271-304 90-119 (120)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=6.6e-44 Score=364.15 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=222.2
Q ss_pred cccchhhccCCCCCCCCCccEEEEEe-----eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhh
Q 007950 127 KQCGEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFS 201 (583)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~Dv~l~v~-----~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 201 (583)
+...+...++.++..+.+|||+|.|+ .|+|||+|||++|+||++ ||+
T Consensus 15 h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~----------------------------mf~ 66 (279)
T 3i3n_A 15 HCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTP----------------------------LLS 66 (279)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGG----------------------------GCC
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHH----------------------------Hhc
Confidence 44455666777778889999999995 599999999999999999 999
Q ss_pred cCCCCCCcceEEEec----CCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhh
Q 007950 202 NGMRESEQRYVTLRI----HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 277 (583)
Q Consensus 202 ~~~~es~~~~v~l~~----~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~ 277 (583)
++|+|+.+..|+|+. +++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|+..|+++|.+ .++++||
T Consensus 67 ~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~ 144 (279)
T 3i3n_A 67 GQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNC 144 (279)
T ss_dssp C--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTH
T ss_pred CCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchH
Confidence 999999999888862 279999999999999999999998 9999999999999999999999999999 8999999
Q ss_pred hhhcccchhhhhhhccHHHHHHHHHHHHHhcccccccchhhhCCCHHHHHHHhcCCCccccchhHHHHHHHHHHhhcCCC
Q 007950 278 LLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPK 357 (583)
Q Consensus 278 ~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~v~sE~~vf~avl~Wi~~~~~~ 357 (583)
+.++.+|+.| ++..|.+.|.+||.+||.++.+ +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++++
T Consensus 145 ~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~--- 216 (279)
T 3i3n_A 145 VAIHSLAHMY----TLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN--- 216 (279)
T ss_dssp HHHHHHHHHT----TCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---
Confidence 9999999998 7899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhHHhhhccccccccccCCCCHHHHHhhccCCCCC--chHHHHHHHHHHhhhccchh
Q 007950 358 LEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PELASKVVLESLFFKAETPY 413 (583)
Q Consensus 358 ~~~R~~~l~~~Ll~~IRfplm~~~~L~~~v~~~~l~--~~~~~~~l~ea~~~~~~~p~ 413 (583)
+++|++++ ++|+++||||+|++++|.+.++.++++ ++.|++++.+|++||+ .|.
T Consensus 217 ~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~-~~~ 272 (279)
T 3i3n_A 217 AEERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHA-LRA 272 (279)
T ss_dssp HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc-Cch
Confidence 88999998 899999999999999999999888775 6889999999999998 443
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=9.3e-43 Score=351.15 Aligned_cols=235 Identities=17% Similarity=0.264 Sum_probs=194.5
Q ss_pred cccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCC
Q 007950 127 KQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM 204 (583)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 204 (583)
+...+...++.++..+.+|||+|.|+ .|+|||+|||++||||++ ||++++
T Consensus 14 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~----------------------------mf~~~~ 65 (256)
T 3hve_A 14 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRT----------------------------KLNYNP 65 (256)
T ss_dssp THHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHH----------------------------TC----
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHH----------------------------HhCCCC
Confidence 44556677888899999999999994 799999999999999999 999988
Q ss_pred C--CCCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhhhhhcc
Q 007950 205 R--ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLD 282 (583)
Q Consensus 205 ~--es~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~~~~l~ 282 (583)
. |+.+..|+++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|+..|+++|.+ .++++||+.++.
T Consensus 66 ~~~e~~~~~i~l~--~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~ 141 (256)
T 3hve_A 66 PKDDGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRD 141 (256)
T ss_dssp -------CEEECS--SCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHH
T ss_pred CcccCCCCeEEeC--CCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHH
Confidence 7 5566777776 99999999999999999999998 9999999999999999999999999999 899999999999
Q ss_pred cchhhhhhhccHHHHHHHHHHHHHhcccccccchhhhCCCHHHHHHHhcCCCccccchhHHHHHHHHHHhhcCCChhhHH
Q 007950 283 LPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERR 362 (583)
Q Consensus 283 ~a~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~v~sE~~vf~avl~Wi~~~~~~~~~R~ 362 (583)
+|+.| ++..|.+.|.+||.+||.++.+ +++|.+||.+.+..+|++|+|+|.+|.+||+++++|++|+ +++|+
T Consensus 142 ~A~~~----~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~ 213 (256)
T 3hve_A 142 FALHY----CLHHVHYLATEYLETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRK 213 (256)
T ss_dssp HHHHT----TCHHHHHHHHHHHHHHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCST
T ss_pred HHHHc----CcHHHHHHHHHHHHHHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHH
Confidence 99998 7899999999999999999999 9999999999999999999999999999999999999999 67899
Q ss_pred hhhccccccccccCCCCHHHHHhhccCCCCC--c-hHHHHHHH
Q 007950 363 EILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--P-ELASKVVL 402 (583)
Q Consensus 363 ~~l~~~Ll~~IRfplm~~~~L~~~v~~~~l~--~-~~~~~~l~ 402 (583)
+++ ++|+++||||+|++++|.+.++.++++ + +.|++++.
T Consensus 214 ~~~-~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 214 VHM-KDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp TTH-HHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred HHH-HHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 998 899999999999999999999988886 3 35887765
No 3
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.95 E-value=9.1e-30 Score=263.22 Aligned_cols=205 Identities=23% Similarity=0.302 Sum_probs=165.4
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCCCCcccccCCCCCccccccCCCccccccccccchhhccCCCCCCCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCGEEATGNIDPAWSM 143 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~l~~~~~~~~ 143 (583)
+||+.+|++|+++++....++.+|+.+++|.+.+..+....+. .+....+..||+++..++ ..+...+.
T Consensus 105 ~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~--~~~~~~~~~p~~~l~~~l---------~~l~~~~~ 173 (312)
T 3hqi_A 105 DWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISG--QNTMNMVKVPECRLADEL---------GGLWENSR 173 (312)
T ss_dssp EEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEEC--CCCCSSCCCCCCCHHHHH---------HHHHHTTC
T ss_pred CcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccc--cccccccCCCCchHHHHH---------HHHHhCCC
Confidence 5999999999999866556799999999998876644322221 223344566777555433 22333467
Q ss_pred CccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEEecCCCCH
Q 007950 144 DLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEE 221 (583)
Q Consensus 144 ~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~ 221 (583)
+|||+|.|+ +|+|||+|||++||||++ ||.++|+|+.+..|+|+ ++++
T Consensus 174 ~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~----------------------------~f~~~~~e~~~~~i~l~--~~~~ 223 (312)
T 3hqi_A 174 FTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEIN--DVEP 223 (312)
T ss_dssp SCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HTTC-----CCSEEEEC--SSCH
T ss_pred CCceEEEECCEEEeHHHHHHHHcCHHHHH----------------------------HhccCccccCCceEEec--CCCH
Confidence 899999994 799999999999999999 99999999999999998 9999
Q ss_pred HHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhhhhhcccchhhhhhhccHHHHHHHH
Q 007950 222 AALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAK 301 (583)
Q Consensus 222 ~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~ 301 (583)
++|+.+|+|+|||++.++. +++.+||.+|++|++++|++.|+++|.+ .++.+||+.++.+|+.| ++..|++.|+
T Consensus 224 ~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~ 297 (312)
T 3hqi_A 224 EVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAV 297 (312)
T ss_dssp HHHHHHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHH
Confidence 9999999999999999988 8999999999999999999999999999 89999999999999998 7899999999
Q ss_pred HHHHHhcccccccch
Q 007950 302 QFLAARYKDISKFQE 316 (583)
Q Consensus 302 ~fi~~~f~~v~~~~~ 316 (583)
+||..||.++++ ++
T Consensus 298 ~~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 298 DFINYHATDVLE-TS 311 (312)
T ss_dssp HHHHHTC--------
T ss_pred HHHHHHHHHHhh-CC
Confidence 999999999987 65
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=2.2e-26 Score=216.99 Aligned_cols=143 Identities=24% Similarity=0.298 Sum_probs=128.8
Q ss_pred CCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEE
Q 007950 137 IDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTL 214 (583)
Q Consensus 137 ~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l 214 (583)
.+...+.+|||+|.++ .|+|||.||+++|+||++ ||.++++|+.+..|.|
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~----------------------------~f~~~~~e~~~~~i~l 78 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEI 78 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHSCCCGGGTTEEEE
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHH----------------------------HHccCccccCCCeEEe
Confidence 3444567999999994 799999999999999999 9999999999999999
Q ss_pred ecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhhhhhcccchhhhhhhccH
Q 007950 215 RIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQ 294 (583)
Q Consensus 215 ~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~~~~l~~a~~~~~~~~~~ 294 (583)
+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+ .++.+||+.++.+|+.| ++.
T Consensus 79 ~--~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~ 150 (172)
T 3htm_A 79 N--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SAD 150 (172)
T ss_dssp C--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCH
T ss_pred c--CCCHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcH
Confidence 8 99999999999999999999988 9999999999999999999999999999 89999999999999998 789
Q ss_pred HHHHHHHHHHHHhcccccccch
Q 007950 295 PLTDTAKQFLAARYKDISKFQE 316 (583)
Q Consensus 295 ~L~~~~~~fi~~~f~~v~~~~~ 316 (583)
.|++.|.+||.+||.++.+ ++
T Consensus 151 ~L~~~~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 151 QLKTQAVDFINYHATDVLE-TS 171 (172)
T ss_dssp HHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHHHHHHc-CC
Confidence 9999999999999999987 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.88 E-value=5.6e-24 Score=195.00 Aligned_cols=125 Identities=26% Similarity=0.303 Sum_probs=92.4
Q ss_pred CCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEE
Q 007950 137 IDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTL 214 (583)
Q Consensus 137 ~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l 214 (583)
.+...+.+|||+|.++ .|+|||.||+++|+||++ ||+++++|+.+..|.+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~----------------------------~f~~~~~e~~~~~i~l 69 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEI 69 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHSSSHHHHHTEEEE
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHH----------------------------HHcCCCcCCCCceEEe
Confidence 3444567899999994 799999999999999999 9999999988889999
Q ss_pred ecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhhhhhcccchhhhhhhccH
Q 007950 215 RIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQ 294 (583)
Q Consensus 215 ~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~~~~l~~a~~~~~~~~~~ 294 (583)
+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|+..|+++|.+ .++.+||+.++.+|+.| ++.
T Consensus 70 ~--~~~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~ 141 (145)
T 4eoz_A 70 N--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SAD 141 (145)
T ss_dssp C--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC----------------------------
T ss_pred c--CCCHHHHHHHHHhhccCccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHH
Confidence 8 99999999999999999999988 9999999999999999999999999999 89999999999999998 566
Q ss_pred HHH
Q 007950 295 PLT 297 (583)
Q Consensus 295 ~L~ 297 (583)
.|+
T Consensus 142 ~Lk 144 (145)
T 4eoz_A 142 QLK 144 (145)
T ss_dssp ---
T ss_pred Hhc
Confidence 665
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.82 E-value=1.6e-21 Score=173.97 Aligned_cols=108 Identities=27% Similarity=0.367 Sum_probs=93.4
Q ss_pred chhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 007950 130 GEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRES 207 (583)
Q Consensus 130 ~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es 207 (583)
.+...++.++..+.+|||+|.++ .|+|||+|||++||||++ ||+++++|+
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~----------------------------~f~~~~~e~ 62 (120)
T 2if5_A 11 DILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKK----------------------------LFTSGAVVD 62 (120)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHC-----
T ss_pred HHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHH----------------------------HhcCCcccc
Confidence 34444555666778999999994 799999999999999999 999999999
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccc
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 268 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~ 268 (583)
.+..|+++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 63 ~~~~i~l~--~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 63 QQNVYEID--FVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp CCSEEECC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCceEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 98989987 99999999999999999999998 999999999999999999999999874
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=2.3e-21 Score=177.63 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=103.5
Q ss_pred cccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCC
Q 007950 127 KQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM 204 (583)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 204 (583)
+...+...++.++..+.+|||+|.++ .|+|||+||||+|+||++ ||.+++
T Consensus 19 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~~ 70 (138)
T 2z8h_A 19 HSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHS----------------------------RIVGQT 70 (138)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTCC
T ss_pred hHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHH----------------------------HHhcCC
Confidence 34455566666777788999999994 799999999999999999 999988
Q ss_pred CCCCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhh
Q 007950 205 RESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 277 (583)
Q Consensus 205 ~es~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~ 277 (583)
.|+ ..|.++ +++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .++.+|+
T Consensus 71 ~e~--~~i~l~-~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sna 138 (138)
T 2z8h_A 71 DAE--LTVTLP-EEVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDSTS 138 (138)
T ss_dssp CTT--EEEECC-TTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCCC
T ss_pred CCC--ceEEeC-CCCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hcccccC
Confidence 763 456663 389999999999999999999998 9999999999999999999999999999 8988874
No 8
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=165.29 Aligned_cols=99 Identities=26% Similarity=0.391 Sum_probs=86.9
Q ss_pred CCCCCCccEEEEEe------eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceE
Q 007950 139 PAWSMDLSTVLRVK------TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYV 212 (583)
Q Consensus 139 ~~~~~~~Dv~l~v~------~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v 212 (583)
...+.+|||+|.++ .|+|||.|||++||||++ ||+++++|+. ..|
T Consensus 3 ~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~----------------------------~f~~~~~e~~-~~i 53 (109)
T 2vkp_A 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYA----------------------------MFYGDLAEVK-SEI 53 (109)
T ss_dssp TTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHH----------------------------HHC------C-CEE
T ss_pred ccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHH----------------------------HhcCCcccCC-CeE
Confidence 34568999999993 699999999999999999 9999999988 888
Q ss_pred EEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 213 TLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 213 ~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
.++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 54 ~l~--~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 54 HIP--DVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp EET--TSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EeC--CCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 887 99999999999999999999998 9999999999999999999999999976
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.81 E-value=4.4e-21 Score=172.89 Aligned_cols=109 Identities=18% Similarity=0.320 Sum_probs=98.7
Q ss_pred cchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCC
Q 007950 129 CGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRE 206 (583)
Q Consensus 129 ~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~e 206 (583)
..+...++.++..+.+|||+|.++ .|+|||+|||++||||++ ||.+++.|
T Consensus 14 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~----------------------------~f~~~~~e 65 (127)
T 1r29_A 14 SDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYS----------------------------IFTDQLKR 65 (127)
T ss_dssp HHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTSTTTT
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHH----------------------------HhcCCccC
Confidence 344555666667788999999994 799999999999999999 99999998
Q ss_pred CCcceEEE-ecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 207 SEQRYVTL-RIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 207 s~~~~v~l-~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
.+..|+| + ++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+
T Consensus 66 -~~~~i~l~~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 66 -NLSVINLDP--EINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp -TCSEEECCT--TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred -CCCEEEeCC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 6778888 6 99999999999999999999998 9999999999999999999999999975
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.81 E-value=9.3e-21 Score=175.29 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=95.2
Q ss_pred cccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCC
Q 007950 127 KQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM 204 (583)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 204 (583)
+...+...++.++..+.+|||+|.++ .|+|||+|||++|+||++ ||.+++
T Consensus 30 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------mf~~~~ 81 (144)
T 2ppi_A 30 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRT----------------------------KLNYNP 81 (144)
T ss_dssp HHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHHCC
T ss_pred hHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHH----------------------------HHcCCC
Confidence 34456666777888899999999994 799999999999999999 999988
Q ss_pred CC--CCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccc
Q 007950 205 RE--SEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 268 (583)
Q Consensus 205 ~e--s~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~ 268 (583)
.| +....|.|+ ++++++|+.+|+|+|||++.++. +++.+|+.+|++|+++.|++.|++||+
T Consensus 82 ~e~e~~~~~I~l~--~v~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 82 PKDDGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp -----CCCEEECC--SSCHHHHHHHHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred ccccCCCcEEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 76 455667776 99999999999999999999998 999999999999999999999999984
No 11
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.80 E-value=7.2e-21 Score=171.00 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=97.3
Q ss_pred ccccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcC
Q 007950 126 LKQCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNG 203 (583)
Q Consensus 126 ~~~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 203 (583)
.+...+...++.++..+.+|||+|.++ .|+|||.|||++|+||++ ||.++
T Consensus 14 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~ 65 (125)
T 3ohu_A 14 VHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQ----------------------------ALVGQ 65 (125)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHTTC
T ss_pred HHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHH----------------------------HhcCC
Confidence 344556666667777789999999994 799999999999999999 99998
Q ss_pred CCCCCcceEEEecCC-CCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcc
Q 007950 204 MRESEQRYVTLRIHA-SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLL 267 (583)
Q Consensus 204 ~~es~~~~v~l~~~~-~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L 267 (583)
+.| +..|.++ + +++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||
T Consensus 66 ~~e--~~~i~l~--~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 66 TKN--DLVVSLP--EEVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp CCS--SCEEECC--TTCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred CCC--CcEEEeC--CCCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 876 5667776 7 9999999999999999999998 99999999999999999999999986
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.80 E-value=8.1e-21 Score=169.67 Aligned_cols=105 Identities=24% Similarity=0.275 Sum_probs=92.8
Q ss_pred chhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 007950 130 GEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRES 207 (583)
Q Consensus 130 ~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es 207 (583)
.+...++.++..+.+|||+|.++ +|+|||+|||++||||++ ||.+++
T Consensus 10 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~~--- 58 (119)
T 3b84_A 10 RVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQS----------------------------LYGDGS--- 58 (119)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTTT---
T ss_pred HHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHH----------------------------HHCCCC---
Confidence 34455555666778999999994 799999999999999999 999876
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
+..|+|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|++++|++.|+++|.+
T Consensus 59 -~~~i~l~--~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 59 -GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -CCCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -CCeEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4678887 99999999999999999999998 9999999999999999999999999986
No 13
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.79 E-value=1e-20 Score=172.94 Aligned_cols=110 Identities=22% Similarity=0.268 Sum_probs=91.8
Q ss_pred chhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 007950 130 GEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRES 207 (583)
Q Consensus 130 ~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es 207 (583)
.+...++.++..+.+|||+|.|+ .|+|||+|||++|+||++ ||.+++
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------mf~~~~--- 59 (135)
T 2yy9_A 11 RVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQR----------------------------IYGDGT--- 59 (135)
T ss_dssp HHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------TCC------
T ss_pred HHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHH----------------------------HHcCCC---
Confidence 44555666777789999999994 799999999999999999 999876
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCch
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCE 275 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~ 275 (583)
+..|+|+ ++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .+...
T Consensus 60 -~~~i~l~--~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 60 -GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp --CCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred -CCeEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 4568887 99999999999999999999998 9999999999999999999999999998 66443
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.79 E-value=1.5e-20 Score=166.81 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=92.9
Q ss_pred hhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCC
Q 007950 131 EEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESE 208 (583)
Q Consensus 131 l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~ 208 (583)
+...++.++..+.+|||+|.++ .|+|||.|||++||||++ ||.++ .
T Consensus 9 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------~f~~~----~ 56 (116)
T 2vpk_A 9 LLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGA----------------------------IYRST----S 56 (116)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHTTC----C
T ss_pred HHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHH----------------------------HHcCC----C
Confidence 3444555566678999999994 799999999999999999 99886 3
Q ss_pred cceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 209 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 209 ~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
+..|+|+.+++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 57 ~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 57 ENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp CSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 56677766689999999999999999999998 9999999999999999999999999863
No 15
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.79 E-value=1.3e-20 Score=169.56 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=91.3
Q ss_pred chhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 007950 130 GEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRES 207 (583)
Q Consensus 130 ~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es 207 (583)
.+...++.++..+.+|||+|.++ .|+|||+|||++||||++ ||.++++|+
T Consensus 15 ~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------mf~~~~~e~ 66 (124)
T 2ihc_A 15 NVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHS----------------------------RIVGQADGE 66 (124)
T ss_dssp HHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHTTC---C
T ss_pred HHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHH----------------------------HHcCCCCCC
Confidence 44455556666778999999994 799999999999999999 999988764
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccc
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 268 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~ 268 (583)
..|+++ +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 67 --~~i~l~-~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 67 --LNITLP-EEVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp --EEEECC-TTSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred --ceEeec-CCcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 456662 389999999999999999999998 999999999999999999999999985
No 16
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.77 E-value=5e-20 Score=164.87 Aligned_cols=104 Identities=24% Similarity=0.324 Sum_probs=92.8
Q ss_pred chhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 007950 130 GEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRES 207 (583)
Q Consensus 130 ~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es 207 (583)
.+...++.++..+.+|||+|.++ +|+|||+|||++||||++ ||.++
T Consensus 14 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~f~~~---- 61 (121)
T 1buo_A 14 GLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEI----------------------------LFHRN---- 61 (121)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHH----------------------------HTTSC----
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHH----------------------------HHcCC----
Confidence 34455555666778999999995 699999999999999999 99874
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
+..|+++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 62 -~~~i~l~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 62 -SQHYTLD--FLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp -CSEEEEC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -CcEEEeC--CCCHHHHHHHHHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4578887 99999999999999999999998 9999999999999999999999999975
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.77 E-value=1.9e-19 Score=161.40 Aligned_cols=99 Identities=18% Similarity=0.143 Sum_probs=84.1
Q ss_pred cchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCC
Q 007950 129 CGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRE 206 (583)
Q Consensus 129 ~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~e 206 (583)
..+...++ +..+.+|||+|.|+ .|+|||+||||+|+||++ .
T Consensus 17 ~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------------~------- 59 (119)
T 3m5b_A 17 DRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----------------------------R------- 59 (119)
T ss_dssp CHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----------------------------C-------
T ss_pred HHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----------------------------C-------
Confidence 34444343 45578999999994 799999999999999987 1
Q ss_pred CCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 207 SEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 207 s~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
+..|.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++++++
T Consensus 60 --~~~i~l~--~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 60 --GQWALGE--GISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp --EEEECCS--SCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred --CCEEEeC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 2456665 99999999999999999999998 9999999999999999999999999875
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.76 E-value=1e-19 Score=164.59 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=88.6
Q ss_pred ccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCC
Q 007950 128 QCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR 205 (583)
Q Consensus 128 ~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 205 (583)
...+...++.++..+.+|||+|.|+ .|+|||.|||++|+||++ ||.++
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~----------------------------~f~~~-- 66 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRD----------------------------LFNNS-- 66 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------------HHHHC--
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHH----------------------------HHcCC--
Confidence 3445555666677788999999994 799999999999999999 99886
Q ss_pred CCCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 206 ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 206 es~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
.+..|.|+ +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 67 --~~~~i~l~-~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 67 --RSAVVELP-AAVQPQSFQQILSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp --CCSEEECC-TTCCHHHHHHHHHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred --CCCEEEEC-CCCCHHHHHHHHHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45667763 389999999999999999999998 9999999999999999999999999986
No 19
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.76 E-value=3.1e-20 Score=165.88 Aligned_cols=105 Identities=25% Similarity=0.302 Sum_probs=91.9
Q ss_pred ccchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCC
Q 007950 128 QCGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR 205 (583)
Q Consensus 128 ~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 205 (583)
...+...++.++..+.+|||+|.++ .|+|||.|||++|+||++ ||+++
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~----------------------------~f~~~-- 60 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKM----------------------------LFVDQ-- 60 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HHHHC--
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHH----------------------------HHcCC--
Confidence 3445555666677788999999994 799999999999999999 99873
Q ss_pred CCCcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhccc
Q 007950 206 ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 268 (583)
Q Consensus 206 es~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~ 268 (583)
+..|.++ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 61 ---~~~i~l~--~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 61 ---KDVVHLD--ISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CSGGGGG--GCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---CCEEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3445555 89999999999999999999998 999999999999999999999999985
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.69 E-value=4.9e-18 Score=151.20 Aligned_cols=97 Identities=21% Similarity=0.254 Sum_probs=84.9
Q ss_pred cchhhccCCCCCCCCCccEEEEEe--eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCC
Q 007950 129 CGEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRE 206 (583)
Q Consensus 129 ~~l~~~l~~~~~~~~~~Dv~l~v~--~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~e 206 (583)
..+...++.++..+.+|||+|.++ .|+|||.|||++|+||++ ||.++
T Consensus 16 ~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~----------------------------~f~~~--- 64 (116)
T 3fkc_A 16 GSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ----------------------------LFSVA--- 64 (116)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HTTSC---
T ss_pred HHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHH----------------------------HHcCC---
Confidence 344555556666788999999994 799999999999999999 99875
Q ss_pred CCcceEEEecCCCCHHHHHHHHhhhccCcc-ccCCcchHHHHHHHhchhhhcchhh
Q 007950 207 SEQRYVTLRIHASEEAALMELLNFMYSSTL-STTTPTALLDVLMAADKFEVASCMR 261 (583)
Q Consensus 207 s~~~~v~l~~~~~~~~~f~~lL~fiYtg~l-~i~~~~~v~~lL~aAd~~~v~~l~~ 261 (583)
+..|.++ ++++++|+.+|+|+|||++ .++. +++.+++.+|++|+++.|++
T Consensus 65 --~~~i~l~--~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 65 --GQVVELS--FIRAEIFAEILNYIYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp --CSEEEEC--SSCHHHHHHHHHHHTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred --CCEEEeC--CCCHHHHHHHHHhhcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 4578887 9999999999999999999 6888 99999999999999998875
No 21
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.4e-17 Score=146.24 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=91.1
Q ss_pred cccCCCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHhcccccccchhhhCCCHHHHHHHhcCCCccccchhHHHHH
Q 007950 267 LRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDF 346 (583)
Q Consensus 267 L~~~~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~v~sE~~vf~a 346 (583)
+.+ .++++||+.++.+|+.| ++..|.++|.+||.+||.++.+ +++|++||.+.|..+|++| |.+|.+||+|
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 455 79999999999999998 8999999999999999999999 9999999999999999997 8899999999
Q ss_pred HHHHHhhcCCChhhHHhhhcccccccccc
Q 007950 347 ALKWARTHYPKLEERREILGSRLGRLIRF 375 (583)
Q Consensus 347 vl~Wi~~~~~~~~~R~~~l~~~Ll~~IRf 375 (583)
+++|++|| +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 88999999 899999995
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.18 E-value=7e-12 Score=117.81 Aligned_cols=108 Identities=17% Similarity=0.284 Sum_probs=86.6
Q ss_pred EEEEE---eeEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhc-CCC-CCCcceEEEecCCCCH
Q 007950 147 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GMR-ESEQRYVTLRIHASEE 221 (583)
Q Consensus 147 v~l~v---~~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~-es~~~~v~l~~~~~~~ 221 (583)
|+|.. +.|.+||.+ |+.|+||++ ||.+ ++. |+.+..|.|+ ++++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~----------------------------m~~~~~~~~e~~~~~Ipl~--~V~~ 51 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLGMDDEGDDDPVPLP--NVNA 51 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHH----------------------------HTTSSCSS------CEECT--TSCH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHH----------------------------HHHhcCCcccccCCCcCCC--CccH
Confidence 55654 369999999 899999999 9998 777 7777778877 9999
Q ss_pred HHHHHHHhhhccCc--------------------------cccCCcchHHHHHHHhchhhhcchhhhhhhccccC--CCC
Q 007950 222 AALMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMT 273 (583)
Q Consensus 222 ~~f~~lL~fiYtg~--------------------------l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~--~l~ 273 (583)
.+|+.+++|+|++. +.++. +++++|+.||++|++..|+.+|++++.++ +.+
T Consensus 52 ~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt 130 (159)
T 2ast_A 52 AILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130 (159)
T ss_dssp HHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999988 77777 89999999999999999999999999752 445
Q ss_pred chhhhhhcccchh
Q 007950 274 CESALLYLDLPSS 286 (583)
Q Consensus 274 ~~n~~~~l~~a~~ 286 (583)
++..-.++.++..
T Consensus 131 ~eeir~~f~I~~d 143 (159)
T 2ast_A 131 PEEIRKTFNIKND 143 (159)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHHHHcCCCCC
Confidence 6666666655543
No 23
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.13 E-value=1.9e-10 Score=115.97 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=91.7
Q ss_pred eeeeEeec-----ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc--------cccCccCC----
Q 007950 432 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHCN---- 491 (583)
Q Consensus 432 ~~lyv~~p-----~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g--------~~~dp~~n---- 491 (583)
+.+|++|+ .+.+++||+.+++|.. ||.+|..|++++++++|| ++||.. ..|||.++
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF----AVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE----EEeCcCCCccccceEEECCCCCceee
Confidence 56888665 3678999999999998 788899999999996665 999961 24577765
Q ss_pred ---CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeeccccccccccc
Q 007950 492 ---MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWT 558 (583)
Q Consensus 492 ---M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~~~~~ 558 (583)
|+.+|..|++++++|+ ++...++.+ |+||| +|+.+++||.++..++.++++
T Consensus 92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~---------- 155 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSV------EAYNIKSNEWFHVAPMNTRRSSVGVGVVG---------- 155 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEET----------
T ss_pred CCCCCccccceEEEEECCEEEEEcCCCCCccCceE------EEEeCCCCeEeecCCCCCcccCceEEEEC----------
Confidence 9999999999987665 334445554 99999 899999999998877755554
Q ss_pred ceecCCceEEECCe
Q 007950 559 AFMADDSIYFINGN 572 (583)
Q Consensus 559 ~~~~~~~~~~i~~~ 572 (583)
+++|.+||.
T Consensus 156 -----~~iyv~GG~ 164 (302)
T 2xn4_A 156 -----GLLYAVGGY 164 (302)
T ss_dssp -----TEEEEECCE
T ss_pred -----CEEEEEeCC
Confidence 678888875
No 24
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.11 E-value=2.7e-10 Score=115.09 Aligned_cols=122 Identities=14% Similarity=0.049 Sum_probs=93.0
Q ss_pred cccce-eeeeEeec---ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc-------cccCccCC-
Q 007950 427 YRRFV-ERAYKYRP---VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG-------FFLSAHCN- 491 (583)
Q Consensus 427 pR~~~-~~lyv~~p---~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g-------~~~dp~~n- 491 (583)
||+.. +.+|++|+ .+.++.|||.+++|.. ++.+|..|++++++|+|| ++||.. ..|||..+
T Consensus 6 pr~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 6 PRRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp ----CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBSSSBCCEEEEEETTTTE
T ss_pred CCccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCCCCCcceEEEEeCCCCe
Confidence 35433 67888665 5689999999999998 788999999999997665 999962 24577775
Q ss_pred ------CCCCCCceEEEEEccc-------c-CCCCccccccccceeeecC---CceeecCCCCcceecceeeeccccccc
Q 007950 492 ------MDQQSSFHCFGLFLGM-------Q-EKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 554 (583)
Q Consensus 492 ------M~~~R~~~~~~vl~G~-------~-~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~ 554 (583)
|+.+|..|++++++|+ + +...++.+ ++||| +|+.+++||.++..++.++++
T Consensus 82 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------ 149 (306)
T 3ii7_A 82 WYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLF------ECYDTRTESWHTKPSMLTQRCSHGMVEAN------ 149 (306)
T ss_dssp EEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET------
T ss_pred EEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeE------EEEeCCCCceEeCCCCcCCcceeEEEEEC------
Confidence 9999999999987666 2 22234454 99999 899999999998877765544
Q ss_pred ccccceecCCceEEECCee
Q 007950 555 IPWTAFMADDSIYFINGNL 573 (583)
Q Consensus 555 ~~~~~~~~~~~~~~i~~~~ 573 (583)
+++|++||..
T Consensus 150 ---------~~iyv~GG~~ 159 (306)
T 3ii7_A 150 ---------GLIYVCGGSL 159 (306)
T ss_dssp ---------TEEEEECCEE
T ss_pred ---------CEEEEECCCC
Confidence 6788888853
No 25
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.06 E-value=3.9e-10 Score=114.69 Aligned_cols=117 Identities=15% Similarity=0.037 Sum_probs=92.6
Q ss_pred eeeeEeec---------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc---------cccCccC
Q 007950 432 ERAYKYRP---------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHC 490 (583)
Q Consensus 432 ~~lyv~~p---------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g---------~~~dp~~ 490 (583)
+.+|++|+ .+.+++||+.+++|.. ||.+|..|++++.+|+|| ++||.. ..|||.+
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY----VIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCTTSCBCCCEEEEETTT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE----EEeCCCCCCcccceEEEEeCCC
Confidence 45677554 3578999999999998 788999999999997766 999971 2457776
Q ss_pred C-------CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccc
Q 007950 491 N-------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 553 (583)
Q Consensus 491 n-------M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~ 553 (583)
+ |+.+|..|++++++|+ ++.+.++.+ ++||| +|+.+++||.++..++..+++
T Consensus 175 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 243 (315)
T 4asc_A 175 FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSA------EVYSITDNKWAPFEAFPQERSSLSLVSLV----- 243 (315)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEET-----
T ss_pred CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceE------EEEECCCCeEEECCCCCCcccceeEEEEC-----
Confidence 5 9999999999987766 333444554 99999 899999999998877766555
Q ss_pred cccccceecCCceEEECCee
Q 007950 554 GIPWTAFMADDSIYFINGNL 573 (583)
Q Consensus 554 ~~~~~~~~~~~~~~~i~~~~ 573 (583)
+++|++||.-
T Consensus 244 ----------~~l~v~GG~~ 253 (315)
T 4asc_A 244 ----------GTLYAIGGFA 253 (315)
T ss_dssp ----------TEEEEEEEEE
T ss_pred ----------CEEEEECCcc
Confidence 6788888874
No 26
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.03 E-value=6.4e-10 Score=113.26 Aligned_cols=118 Identities=19% Similarity=0.203 Sum_probs=91.4
Q ss_pred eeeeEeec--------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc---------cccCccCC
Q 007950 432 ERAYKYRP--------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHCN 491 (583)
Q Consensus 432 ~~lyv~~p--------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g---------~~~dp~~n 491 (583)
+.+|++|+ .+.+++||+.+++|.. ||.+|..|++++.+|+|| ++||.. ..|||.++
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY----CLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE----EECCEESSSCBCCCEEEEETTTT
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE----EEcCCCCCCCccceEEEEcCCCC
Confidence 45677544 2578999999999998 788899999999997766 999961 23577765
Q ss_pred -------CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeeccccccc
Q 007950 492 -------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 554 (583)
Q Consensus 492 -------M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~ 554 (583)
|+.+|..|++++++|+ ++.+.+..+ |+||| +|+.+++||.++..++..+++
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------ 253 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASV------EAFDLKTNKWEVMTEFPQERSSISLVSLA------ 253 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEE------EEEETTTCCEEECCCCSSCCBSCEEEEET------
T ss_pred EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceE------EEEECCCCeEEECCCCCCcccceEEEEEC------
Confidence 9999999999887766 333334453 99999 899999999988877655554
Q ss_pred ccccceecCCceEEECCeee
Q 007950 555 IPWTAFMADDSIYFINGNLH 574 (583)
Q Consensus 555 ~~~~~~~~~~~~~~i~~~~~ 574 (583)
+++|++||...
T Consensus 254 ---------~~i~v~GG~~~ 264 (318)
T 2woz_A 254 ---------GSLYAIGGFAM 264 (318)
T ss_dssp ---------TEEEEECCBCC
T ss_pred ---------CEEEEECCeec
Confidence 67888888643
No 27
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.02 E-value=1.1e-09 Score=110.48 Aligned_cols=116 Identities=17% Similarity=0.128 Sum_probs=90.4
Q ss_pred eeeeEeec-----ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc---------cccCccCC---
Q 007950 432 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHCN--- 491 (583)
Q Consensus 432 ~~lyv~~p-----~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g---------~~~dp~~n--- 491 (583)
+.+|++|+ .+.++.|||.+++|.. |+.+|..|++++++|+|| ++||.. +.|||..+
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIY----TSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEE----EECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEE----EECCCCCCCcEeeeEEEEeCCCCceE
Confidence 45677654 4689999999999998 788999999999997666 999962 23577765
Q ss_pred ----CCCCCCceEEEEEccc-------cCCCC----ccccccccceeeecC---CceeecCCCCcceecceeeecccccc
Q 007950 492 ----MDQQSSFHCFGLFLGM-------QEKGS----VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 553 (583)
Q Consensus 492 ----M~~~R~~~~~~vl~G~-------~~~~~----lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~ 553 (583)
|+.+|..|++++++|+ ++.+. +..+ |+||| +|+.+++||.++..++..+++
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 200 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC------EVYDPATETWTELCPMIEARKNHGLVFVK----- 200 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET-----
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE------EEeCCCCCeEEECCCccchhhcceEEEEC-----
Confidence 9999999999887666 33332 4454 99999 899999999988877755554
Q ss_pred cccccceecCCceEEECCe
Q 007950 554 GIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 554 ~~~~~~~~~~~~~~~i~~~ 572 (583)
+++|++||.
T Consensus 201 ----------~~i~v~GG~ 209 (306)
T 3ii7_A 201 ----------DKIFAVGGQ 209 (306)
T ss_dssp ----------TEEEEECCE
T ss_pred ----------CEEEEEeCC
Confidence 667788775
No 28
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.01 E-value=1.2e-09 Score=109.81 Aligned_cols=121 Identities=20% Similarity=0.161 Sum_probs=88.1
Q ss_pred cccce-eeeeEeec-------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc--------cccC
Q 007950 427 YRRFV-ERAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLS 487 (583)
Q Consensus 427 pR~~~-~~lyv~~p-------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g--------~~~d 487 (583)
||... +.+|++|+ .+.+.+|||.+++|.. ++.+|..|++++.+++|| ++||.. +.||
T Consensus 9 pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~~~~~~~~~~~~~d 84 (301)
T 2vpj_A 9 ARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGYDGRSRLSSVECLD 84 (301)
T ss_dssp ----CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEE
T ss_pred ccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCCCCCccCceEEEEE
Confidence 46433 56777665 3578999999999998 778899999999996665 999961 1345
Q ss_pred ccC----------CCCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeee
Q 007950 488 AHC----------NMDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAV 547 (583)
Q Consensus 488 p~~----------nM~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~av 547 (583)
+.+ .|+.+|..|++++++|+ ++...++.+ ++||| +|+.+++||.++..++..++
T Consensus 85 ~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 85 YTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSM------ERYDPNIDQWSMLGDMQTAREGAGLVVA 158 (301)
T ss_dssp TTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEE------EEEETTTTEEEEEEECSSCCBSCEEEEE
T ss_pred CCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceE------EEEcCCCCeEEECCCCCCCcccceEEEE
Confidence 543 28999999999987666 333334554 99999 89999999998877765544
Q ss_pred cccccccccccceecCCceEEECCe
Q 007950 548 GYRNLFGIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 548 g~~~~~~~~~~~~~~~~~~~~i~~~ 572 (583)
+ +++|++||.
T Consensus 159 ~---------------~~iyv~GG~ 168 (301)
T 2vpj_A 159 S---------------GVIYCLGGY 168 (301)
T ss_dssp T---------------TEEEEECCB
T ss_pred C---------------CEEEEECCC
Confidence 3 567777764
No 29
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.01 E-value=1.1e-09 Score=111.09 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=89.7
Q ss_pred eeeeEeecc----------eeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc--------cccCccC
Q 007950 432 ERAYKYRPV----------KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHC 490 (583)
Q Consensus 432 ~~lyv~~p~----------ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g--------~~~dp~~ 490 (583)
+.+|++|+. +.+++||+.+++|.. |+.+|..|++++++|+|| ++||.. +.|||.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCEETTEECCCEEEEETTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCCCCCcccccEEEECCCC
Confidence 457776553 468999999999998 788999999999997666 999961 2457776
Q ss_pred C-------CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccc
Q 007950 491 N-------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 553 (583)
Q Consensus 491 n-------M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~ 553 (583)
+ |+.+|..|++++++|+ ++...+..+ ++||| +|+.+++||.++..++..+++
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 215 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSA------ECYYPERNEWRMITAMNTIRSGAGVCVLH----- 215 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET-----
T ss_pred CeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceE------EEEeCCCCeEeeCCCCCCccccceEEEEC-----
Confidence 5 9999999999887665 333344554 99999 899999999988877655444
Q ss_pred cccccceecCCceEEECCe
Q 007950 554 GIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 554 ~~~~~~~~~~~~~~~i~~~ 572 (583)
++||++||.
T Consensus 216 ----------~~iyv~GG~ 224 (308)
T 1zgk_A 216 ----------NCIYAAGGY 224 (308)
T ss_dssp ----------TEEEEECCB
T ss_pred ----------CEEEEEeCC
Confidence 567777775
No 30
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.01 E-value=1.3e-09 Score=110.63 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=90.5
Q ss_pred eeeeEeec------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc--------cccCccCC---
Q 007950 432 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHCN--- 491 (583)
Q Consensus 432 ~~lyv~~p------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g--------~~~dp~~n--- 491 (583)
+.+|++++ .+.++.||+.+++|.. ++.+|..|++++++++|| ++||.. ..|||..+
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY----AVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE----EEeCCCCCCcCceEEEEeCCCCeEe
Confidence 45777654 4689999999999998 788899999999997666 999971 23577665
Q ss_pred ----CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccccccc
Q 007950 492 ----MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 557 (583)
Q Consensus 492 ----M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~~~~ 557 (583)
|+.+|..|++++++|+ ++...+..+ ++||| +|+.+++||.++..++..+++
T Consensus 198 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--------- 262 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSV------ERYDVETETWTFVAPMKHRRSALGITVHQ--------- 262 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET---------
T ss_pred eCCCCCCccccceEEEECCEEEEEeCCCCCCccceE------EEEeCCCCcEEECCCCCCCccceEEEEEC---------
Confidence 9999999999887665 333334554 99999 899999999988877655554
Q ss_pred cceecCCceEEECCe
Q 007950 558 TAFMADDSIYFINGN 572 (583)
Q Consensus 558 ~~~~~~~~~~~i~~~ 572 (583)
++||++||.
T Consensus 263 ------~~i~v~GG~ 271 (308)
T 1zgk_A 263 ------GRIYVLGGY 271 (308)
T ss_dssp ------TEEEEECCB
T ss_pred ------CEEEEEcCc
Confidence 678888885
No 31
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.00 E-value=1.5e-09 Score=109.38 Aligned_cols=116 Identities=17% Similarity=0.138 Sum_probs=89.1
Q ss_pred eeeeEeec------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEeccc-c---------cccCccCC-
Q 007950 432 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G---------FFLSAHCN- 491 (583)
Q Consensus 432 ~~lyv~~p------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~-g---------~~~dp~~n- 491 (583)
+.+|++|+ .+.++.||+.+++|.. |+.+|..|++++++|+|| ++||. + +.|||.++
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLY----AVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EECCEETTTTEECCCEEEEETTTTE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEE----EEeCCCCCCCccccEEEEEeCCCCc
Confidence 45677554 4689999999999998 788999999999997666 99997 1 13577765
Q ss_pred ------CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccccc
Q 007950 492 ------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGI 555 (583)
Q Consensus 492 ------M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~~ 555 (583)
|+.+|..|++++++|+ ++......+ ++||| +|+.+++|+.++..++.++++
T Consensus 185 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~~~~r~~~~~~~~~------- 251 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSV------EVYDPTTNAWRQVADMNMCRRNAGVCAVN------- 251 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET-------
T ss_pred EEECCCCccccccccEEEECCEEEEECCCCCCcccceE------EEEeCCCCCEeeCCCCCCccccCeEEEEC-------
Confidence 9999999999887666 332234443 99999 899999999888766654443
Q ss_pred cccceecCCceEEECCe
Q 007950 556 PWTAFMADDSIYFINGN 572 (583)
Q Consensus 556 ~~~~~~~~~~~~~i~~~ 572 (583)
+++|++||.
T Consensus 252 --------~~i~v~GG~ 260 (302)
T 2xn4_A 252 --------GLLYVVGGD 260 (302)
T ss_dssp --------TEEEEECCB
T ss_pred --------CEEEEECCc
Confidence 677888774
No 32
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=111.14 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=82.7
Q ss_pred eEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEecccc-----------cccCccCC-------CCCCCCceE
Q 007950 442 VVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG-----------FFLSAHCN-------MDQQSSFHC 500 (583)
Q Consensus 442 sVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~g-----------~~~dp~~n-------M~~~R~~~~ 500 (583)
.+..|||.+++|.. |+.+|..|++++++|+|| ++||.. +.|||.++ |+.+|..|+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIY----VVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEE----EECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEE----EEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 48899999999998 888999999999997666 999951 23577665 999999999
Q ss_pred EEEEccc--------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccccccccceecCCceEEE
Q 007950 501 FGLFLGM--------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFI 569 (583)
Q Consensus 501 ~~vl~G~--------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~~~~~~~~~~~~~~~i 569 (583)
+++++|+ ++...++.+ ++||| +|+.+++||.++..++..+++ +++|.+
T Consensus 144 ~~~~~~~iyv~GG~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~---------------~~iyv~ 202 (315)
T 4asc_A 144 VLSHMDLVYVIGGKGSDRKCLNKM------CVYDPKKFEWKELAPMQTARSLFGATVHD---------------GRIIVA 202 (315)
T ss_dssp EEEETTEEEEECCBCTTSCBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET---------------TEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcccceE------EEEeCCCCeEEECCCCCCchhceEEEEEC---------------CEEEEE
Confidence 9887665 222234453 99999 899999999998887766554 567777
Q ss_pred CCe
Q 007950 570 NGN 572 (583)
Q Consensus 570 ~~~ 572 (583)
||.
T Consensus 203 GG~ 205 (315)
T 4asc_A 203 AGV 205 (315)
T ss_dssp EEE
T ss_pred ecc
Confidence 764
No 33
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.99 E-value=1.8e-09 Score=108.48 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=90.2
Q ss_pred eeeeEeec------ceeEEEecCCCCeEEe---ecccccceeEEeeCCeeeceeEEeccc-c-------cccCccCC---
Q 007950 432 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G-------FFLSAHCN--- 491 (583)
Q Consensus 432 ~~lyv~~p------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl~gklYn~lYviGG~-g-------~~~dp~~n--- 491 (583)
+.+|++++ .+.++.||+.+++|.. ++.+|..|++++.+|+|| ++||. + ..|||.++
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY----CLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE----EECCCCCCcccceEEEEeCCCCcEE
Confidence 45677654 4689999999999998 788899999999997666 99997 1 23577665
Q ss_pred ----CCCCCCceEEEEEccc-------cCCCCccccccccceeeecC---CceeecCCCCcceecceeeecccccccccc
Q 007950 492 ----MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 557 (583)
Q Consensus 492 ----M~~~R~~~~~~vl~G~-------~~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~~~~ 557 (583)
|+.+|..|++++++|+ ++.+.+..+ ++||| +|+.+++||.++..++..+++
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--------- 253 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV------EAYNIRTDSWTTVTSMTTPRCYVGATVLR--------- 253 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET---------
T ss_pred eCCCCCcccccceEEEECCEEEEEeCCCCCcccceE------EEEeCCCCcEEECCCCCCcccceeEEEEC---------
Confidence 9999999999887665 333334554 99999 899999999988877655554
Q ss_pred cceecCCceEEECCe
Q 007950 558 TAFMADDSIYFINGN 572 (583)
Q Consensus 558 ~~~~~~~~~~~i~~~ 572 (583)
+++|++||.
T Consensus 254 ------~~i~v~GG~ 262 (301)
T 2vpj_A 254 ------GRLYAIAGY 262 (301)
T ss_dssp ------TEEEEECCB
T ss_pred ------CEEEEEcCc
Confidence 677888874
No 34
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.94 E-value=3.4e-09 Score=107.88 Aligned_cols=115 Identities=13% Similarity=0.125 Sum_probs=87.7
Q ss_pred eeeeEeecceeEEEecCCCCeEEe--ec--ccccceeEEeeCCeeeceeEEeccc-----c---------cccCccCC--
Q 007950 432 ERAYKYRPVKVVEFELPRQQCVVY--LD--LKREECAHLFPAGRIYSQAFHLGGQ-----G---------FFLSAHCN-- 491 (583)
Q Consensus 432 ~~lyv~~p~ksVe~ydp~~~~W~~--L~--~~R~~~~vavl~gklYn~lYviGG~-----g---------~~~dp~~n-- 491 (583)
+.+|++++. .+++|||.+++|.. ++ .+|..|++++.+++|| ++||. + ..|||.++
T Consensus 16 ~~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 16 DLILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVY----VVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEE----EEESSCC-------CCCBEEEEEETTTTEE
T ss_pred chhhhcccc-ceEEECCCCCceecccCCccCCccceEEEEECCEEE----EECCcccCccccCCCccccEEEEeCCCCcE
Confidence 577887764 58999999999988 44 5789999999996655 99994 1 12477665
Q ss_pred -----CCCCCCceEEEEEccc-------c--CCCCccccccccceeeecC---CceeecCCCCcceecceeeeccccccc
Q 007950 492 -----MDQQSSFHCFGLFLGM-------Q--EKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 554 (583)
Q Consensus 492 -----M~~~R~~~~~~vl~G~-------~--~~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~~~~~~ 554 (583)
|+.+|..|++++++|+ + +...++.+ ++||| +|+.+++||.++..++.++++
T Consensus 91 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------ 158 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV------LCYDPVAAKWSEVKNLPIKVYGHNVISHN------ 158 (318)
T ss_dssp EECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE------EEEETTTTEEEEECCCSSCEESCEEEEET------
T ss_pred EECCCCCccccccceEEECCEEEEEcCccCCCCcccceE------EEEeCCCCCEeECCCCCCcccccEEEEEC------
Confidence 9999999999987666 2 22234453 99999 899999999998877655543
Q ss_pred ccccceecCCceEEECCe
Q 007950 555 IPWTAFMADDSIYFINGN 572 (583)
Q Consensus 555 ~~~~~~~~~~~~~~i~~~ 572 (583)
+++|++||.
T Consensus 159 ---------~~iyv~GG~ 167 (318)
T 2woz_A 159 ---------GMIYCLGGK 167 (318)
T ss_dssp ---------TEEEEECCE
T ss_pred ---------CEEEEEcCC
Confidence 678888885
No 35
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.92 E-value=2.5e-10 Score=130.19 Aligned_cols=185 Identities=10% Similarity=0.011 Sum_probs=122.7
Q ss_pred HHhhcCCChhhHHhhhccccccccccCCCCHHHHHhhccCCCCC--ch---HHHHHHH------HHHhhhccchhhhhhh
Q 007950 350 WARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PE---LASKVVL------ESLFFKAETPYRQRAL 418 (583)
Q Consensus 350 Wi~~~~~~~~~R~~~l~~~Ll~~IRfplm~~~~L~~~v~~~~l~--~~---~~~~~l~------ea~~~~~~~p~~q~~l 418 (583)
|+.++ ...|.+.+ +.|++.+||++|...++......+... .+ .|.++.. ++..++.
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 381 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLLE--------- 381 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEEE---------
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEec---------
Confidence 88876 56677888 899999999999888877666555432 12 2222210 0000110
Q ss_pred hccccccccccce------eeeeEeec-----ceeEEEecCCCCeEEee---------cccccceeEEee--CCeeecee
Q 007950 419 AAEEANSTYRRFV------ERAYKYRP-----VKVVEFELPRQQCVVYL---------DLKREECAHLFP--AGRIYSQA 476 (583)
Q Consensus 419 ~s~~t~~~pR~~~------~~lyv~~p-----~ksVe~ydp~~~~W~~L---------~~~R~~~~vavl--~gklYn~l 476 (583)
.+. .+ +|++. +.+|++|+ .+.+.+|||.+++|..+ +.+|.+|+++++ +|+||
T Consensus 382 -~~~-~p-~rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly--- 455 (695)
T 2zwa_A 382 -CEC-PI-NRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL--- 455 (695)
T ss_dssp -CCC-TT-CCBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE---
T ss_pred -cCC-CC-CCceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE---
Confidence 011 11 23332 45777665 35789999999999873 456899999999 97665
Q ss_pred EEecccc---------cccCccCC-------CCCCCCceEEEEE-ccc----cCCCCccccccccceeeecC---Cceee
Q 007950 477 FHLGGQG---------FFLSAHCN-------MDQQSSFHCFGLF-LGM----QEKGSVSFAVDYEFAARIKP---TEEYV 532 (583)
Q Consensus 477 YviGG~g---------~~~dp~~n-------M~~~R~~~~~~vl-~G~----~~~~~lssvVd~~~aErYdP---~W~~v 532 (583)
++||.. +.||+.++ |+.+|..|+++++ +|+ .|...-.. | ++||| +|+.+
T Consensus 456 -v~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~-v-----~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 456 -LIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPA-M-----LLYNVTEEIFKDV 528 (695)
T ss_dssp -EECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCS-E-----EEEETTTTEEEEC
T ss_pred -EEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCC-E-----EEEECCCCceEEc
Confidence 999971 13577765 9999999999986 665 12111114 3 99999 89999
Q ss_pred cC---CCCcceecceeeecccccccccccceecCCceEEECCe
Q 007950 533 SK---YKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 533 ap---m~~~~~~~g~~avg~~~~~~~~~~~~~~~~~~~~i~~~ 572 (583)
++ ||.++..+++.+++. .++++|++||.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~------------~~~~iyv~GG~ 559 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDP------------VSKQGIILGGG 559 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEET------------TTTEEEEECCB
T ss_pred cCCCCCCCcccceeEEEEeC------------CCCEEEEECCc
Confidence 97 888888777666553 12578888886
No 36
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.88 E-value=1.6e-09 Score=93.41 Aligned_cols=72 Identities=18% Similarity=0.248 Sum_probs=59.4
Q ss_pred eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhc--CCCCCCcceEEEecCCCCHHHHHHHHhh
Q 007950 153 TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEEAALMELLNF 230 (583)
Q Consensus 153 ~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~--~~~es~~~~v~l~~~~~~~~~f~~lL~f 230 (583)
.|.+||.+ |+.|+||++ ||.+ ++.|+.+..|.|+ ++++.+++.+++|
T Consensus 13 ~F~v~r~v-A~~S~~ik~----------------------------m~~~~~~~~E~~~~~I~l~--~V~~~iL~kViey 61 (97)
T 4ajy_C 13 EFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCMY 61 (97)
T ss_dssp EEEEEHHH-HTTSHHHHH----------------------------HHCCC--------CEEECT--TSCHHHHHHHHHH
T ss_pred EEEecHHH-HHHhHHHHH----------------------------HHHhCCCccccCCCceECC--CCCHHHHHHHHHH
Confidence 69999999 999999999 9987 6778778888887 9999999999999
Q ss_pred hc-----c---Cccc---cCCcchHHHHHHHhchhhh
Q 007950 231 MY-----S---STLS---TTTPTALLDVLMAADKFEV 256 (583)
Q Consensus 231 iY-----t---g~l~---i~~~~~v~~lL~aAd~~~v 256 (583)
+| + +.++ ++. +++++|+.||++|+.
T Consensus 62 ~~~h~~~~~~~~~i~~~~i~~-~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 62 FTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 97 (97)
T ss_dssp HHHHHHHTTCCSCCCCCCCCG-GGHHHHHHHHHHHTC
T ss_pred HHHhcccCCCcCCCCcCcCCH-HHHHHHHHHHhhhCC
Confidence 99 5 6777 887 999999999999973
No 37
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.68 E-value=6e-08 Score=99.94 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=84.9
Q ss_pred eeeeEeec--ceeEEEecCC--CCeEEe---ec-ccccceeEEeeCCeeeceeEEeccc-c------------cccCccC
Q 007950 432 ERAYKYRP--VKVVEFELPR--QQCVVY---LD-LKREECAHLFPAGRIYSQAFHLGGQ-G------------FFLSAHC 490 (583)
Q Consensus 432 ~~lyv~~p--~ksVe~ydp~--~~~W~~---L~-~~R~~~~vavl~gklYn~lYviGG~-g------------~~~dp~~ 490 (583)
+.||++++ .+.+.+||+. +++|.. |+ .+|..|++++++|+|| ++||. . +.|||.+
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCEEECTTSCEEECCCEEEEETTT
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCCCCCCCccceeeccEEEEeCCC
Confidence 45777665 3578999997 599998 77 7899999999997665 99997 1 1357776
Q ss_pred C-------CC-CCCCceEEEEEccc----cCCC-------------------------------------Cccccccccc
Q 007950 491 N-------MD-QQSSFHCFGLFLGM----QEKG-------------------------------------SVSFAVDYEF 521 (583)
Q Consensus 491 n-------M~-~~R~~~~~~vl~G~----~~~~-------------------------------------~lssvVd~~~ 521 (583)
+ |. .+|..|++++++|+ .|.. .++.+
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----- 170 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL----- 170 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE-----
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE-----
Confidence 5 77 99999988877666 1111 12343
Q ss_pred eeeecC---CceeecCCCCccee-cceeeecccccccccccceecCCceEEECCe
Q 007950 522 AARIKP---TEEYVSKYKGNYTF-TGGKAVGYRNLFGIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 522 aErYdP---~W~~vapm~~~~~~-~g~~avg~~~~~~~~~~~~~~~~~~~~i~~~ 572 (583)
++||| +|+.+++||.++.. ++.++++ ++||++||.
T Consensus 171 -~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~---------------~~iyv~GG~ 209 (357)
T 2uvk_A 171 -LSFDPSTQQWSYAGESPWYGTAGAAVVNKG---------------DKTWLINGE 209 (357)
T ss_dssp -EEEETTTTEEEEEEECSSCCCBSCEEEEET---------------TEEEEECCE
T ss_pred -EEEeCCCCcEEECCCCCCCCcccccEEEEC---------------CEEEEEeee
Confidence 99999 89999999976554 4434333 678888875
No 38
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.66 E-value=9.4e-08 Score=98.43 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=75.1
Q ss_pred eeEEEecCCCCeEEe---eccccc-ceeEEeeCCeeeceeEEeccc---c------ccc--CccCC-------CCCCCC-
Q 007950 441 KVVEFELPRQQCVVY---LDLKRE-ECAHLFPAGRIYSQAFHLGGQ---G------FFL--SAHCN-------MDQQSS- 497 (583)
Q Consensus 441 ksVe~ydp~~~~W~~---L~~~R~-~~~vavl~gklYn~lYviGG~---g------~~~--dp~~n-------M~~~R~- 497 (583)
+.+++|||.+++|.. |+.+|. .+++++.+++|| ++||. + ..| ||.++ |+.+|.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iy----v~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTW----LINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEE----EECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEE----EEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 689999999999998 666554 499999997666 99996 1 123 45654 766654
Q ss_pred -ceEEEEEccc-------cCCC-----------------CccccccccceeeecC---CceeecCCCCcceecceeeecc
Q 007950 498 -FHCFGLFLGM-------QEKG-----------------SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 549 (583)
Q Consensus 498 -~~~~~vl~G~-------~~~~-----------------~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~avg~ 549 (583)
.|++++++|+ +..+ .+.++ |+||| +|+.+++||.++..++..+++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~- 316 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYST------DIHLWHNGKWDKSGELSQGRAYGVSLPWN- 316 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECC------EEEECC---CEEEEECSSCCBSSEEEEET-
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeE------EEEecCCCceeeCCCCCCCcccceeEEeC-
Confidence 6667766655 2111 12343 99999 999999999998876654444
Q ss_pred cccccccccceecCCceEEECCeee
Q 007950 550 RNLFGIPWTAFMADDSIYFINGNLH 574 (583)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~i~~~~~ 574 (583)
+++|++||.-.
T Consensus 317 --------------~~i~v~GG~~~ 327 (357)
T 2uvk_A 317 --------------NSLLIIGGETA 327 (357)
T ss_dssp --------------TEEEEEEEECG
T ss_pred --------------CEEEEEeeeCC
Confidence 78899988643
No 39
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.61 E-value=1.4e-08 Score=93.51 Aligned_cols=96 Identities=14% Similarity=0.197 Sum_probs=78.6
Q ss_pred EEEEE---eeEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEEecCCCCHHH
Q 007950 147 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 223 (583)
Q Consensus 147 v~l~v---~~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~ 223 (583)
|+|.. +.|.+|+.+ |..|++|++ ||.+.- ...|.|+ +++..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~----------------------------ml~~~~----~~~Ipl~--~V~~~i 48 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLG----MDPVPLP--NVNAAI 48 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHH----------------------------HHHHTC----CSSEECT--TCCHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcC----CCceecC--CcCHHH
Confidence 45555 379999998 889999999 998631 3467776 999999
Q ss_pred HHHHHhhhccCc--------------------------cccCCcchHHHHHHHhchhhhcchhhhhhhccccCCCCchhh
Q 007950 224 LMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 277 (583)
Q Consensus 224 f~~lL~fiYtg~--------------------------l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l~~~n~ 277 (583)
++.+++|+|+.. +.++. +++.+|+.||++|++..|...|++++.+ .+.-.+.
T Consensus 49 L~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ 126 (141)
T 1fs1_B 49 LKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTP 126 (141)
T ss_dssp HHHHHHHHHHHTTCC-----------------HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCH
T ss_pred HHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCH
Confidence 999999999876 56666 8999999999999999999999999987 4544444
Q ss_pred hh
Q 007950 278 LL 279 (583)
Q Consensus 278 ~~ 279 (583)
-.
T Consensus 127 ee 128 (141)
T 1fs1_B 127 EE 128 (141)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 40
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.59 E-value=8.3e-09 Score=96.95 Aligned_cols=99 Identities=10% Similarity=0.225 Sum_probs=58.9
Q ss_pred eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEEecCCCCHHHHHHHHhhhc
Q 007950 153 TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 232 (583)
Q Consensus 153 ~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~f~~lL~fiY 232 (583)
.|.+|+.+ |..|++|+. ||.+... ...|.|+ +++..+|+.+++|+|
T Consensus 15 ~f~v~~~v-A~~S~~ik~----------------------------ml~~~~~---~~~Ipl~--~V~~~iL~kVieyc~ 60 (160)
T 2p1m_A 15 SFEVEEAV-ALESQTIAH----------------------------MVEDDCV---DNGVPLP--NVTSKILAKVIEYCK 60 (160)
T ss_dssp -----CHH-HHTCTTTC-------------------------------------------CCT--TSCHHHHHHHHHC--
T ss_pred EEEECHHH-HHHhHHHHH----------------------------HHHccCC---CCceeCC--cCcHHHHHHHHHHHH
Confidence 69999998 889999999 9987532 3456665 999999999999999
Q ss_pred cCc---------------------------cccCCcchHHHHHHHhchhhhcchhhhhhhccccCCC---Cchhhhhhcc
Q 007950 233 SST---------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM---TCESALLYLD 282 (583)
Q Consensus 233 tg~---------------------------l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l---~~~n~~~~l~ 282 (583)
+.. +.++. +++++|+.||++|++..|..+|++++.+ .| +++.+..++.
T Consensus 61 ~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~ 138 (160)
T 2p1m_A 61 RHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFN 138 (160)
T ss_dssp -----------------------------------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTT
T ss_pred HcccCCCcccccccccccccchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcC
Confidence 976 35666 8999999999999999999999999998 46 7777777777
Q ss_pred cchhh
Q 007950 283 LPSSV 287 (583)
Q Consensus 283 ~a~~~ 287 (583)
++.-+
T Consensus 139 I~nd~ 143 (160)
T 2p1m_A 139 IKNDF 143 (160)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 65543
No 41
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.45 E-value=3e-07 Score=104.74 Aligned_cols=116 Identities=11% Similarity=-0.100 Sum_probs=83.9
Q ss_pred eeeEeec-------ceeEEEecCCCCeEEe---ecccccceeEEee-CCeeeceeEEecccc-----cccCccCC-----
Q 007950 433 RAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFP-AGRIYSQAFHLGGQG-----FFLSAHCN----- 491 (583)
Q Consensus 433 ~lyv~~p-------~ksVe~ydp~~~~W~~---L~~~R~~~~vavl-~gklYn~lYviGG~g-----~~~dp~~n----- 491 (583)
.+|++|+ .+.+++||+.+++|.. |+.+|..|+++++ +|+|| ++||.. +.|||.++
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBCSSCSEEEEETTTTEEEEC
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCCCCCCEEEEECCCCceEEc
Confidence 4666543 4678999999999998 8889999999996 86665 999972 24666654
Q ss_pred -----CCCCCCceEEEEEc---cc-------cCC--CCccccccccceeeecC---C------ceeecCCC-Ccceecce
Q 007950 492 -----MDQQSSFHCFGLFL---GM-------QEK--GSVSFAVDYEFAARIKP---T------EEYVSKYK-GNYTFTGG 544 (583)
Q Consensus 492 -----M~~~R~~~~~~vl~---G~-------~~~--~~lssvVd~~~aErYdP---~------W~~vapm~-~~~~~~g~ 544 (583)
|+.+|..|+.++++ |+ +.. ..++.+ ++||| + |+.++++| .++..++.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v------~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA------IIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE------EEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE------EEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 78899999876655 33 222 223443 99999 6 89998874 56666655
Q ss_pred eeecccccccccccceecCCceEEECCe
Q 007950 545 KAVGYRNLFGIPWTAFMADDSIYFINGN 572 (583)
Q Consensus 545 ~avg~~~~~~~~~~~~~~~~~~~~i~~~ 572 (583)
.+++ ++++|++||.
T Consensus 603 ~~~~--------------~~~iyv~GG~ 616 (695)
T 2zwa_A 603 KYIT--------------PRKLLIVGGT 616 (695)
T ss_dssp EEEE--------------TTEEEEECCB
T ss_pred EEeC--------------CCEEEEECCc
Confidence 5555 3678888885
No 42
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.13 E-value=2.1e-06 Score=96.55 Aligned_cols=88 Identities=13% Similarity=0.017 Sum_probs=64.6
Q ss_pred eeEEEecCCCCeEEe---eccccccee--EE-eeCCeeeceeEEecccc----cccCccCC-------CCCCCCceEEEE
Q 007950 441 KVVEFELPRQQCVVY---LDLKREECA--HL-FPAGRIYSQAFHLGGQG----FFLSAHCN-------MDQQSSFHCFGL 503 (583)
Q Consensus 441 ksVe~ydp~~~~W~~---L~~~R~~~~--va-vl~gklYn~lYviGG~g----~~~dp~~n-------M~~~R~~~~~~v 503 (583)
..+.+|||.+++|.. |+.+|..++ ++ +.+|+|| ++||.. ..|||.++ |+.+|..|++++
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly----v~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV----VTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE----EECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE----EeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 478899999999987 666676653 44 4676665 999972 45688765 999999999998
Q ss_pred E-ccc----cC----CCCccccccccceeeecC---Cceee-----cCCCCc
Q 007950 504 F-LGM----QE----KGSVSFAVDYEFAARIKP---TEEYV-----SKYKGN 538 (583)
Q Consensus 504 l-~G~----~~----~~~lssvVd~~~aErYdP---~W~~v-----apm~~~ 538 (583)
+ +|+ .| ...+.++ |+||| +|+.+ +||+..
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~------e~yd~~t~~W~~~~~~~~~p~~~~ 340 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNG------EVYSPSSKTWTSLPNAKVNPMLTA 340 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCE------EEEETTTTEEEEETTSCSGGGCCC
T ss_pred ecCCeEEEEeCcccCCcccccc------eEeCCCCCcceeCCCccccccccc
Confidence 8 776 12 2234453 99999 89998 566654
No 43
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.01 E-value=1.4e-05 Score=89.99 Aligned_cols=112 Identities=14% Similarity=0.126 Sum_probs=77.2
Q ss_pred cceeEEEecCCCCeEEe-eccccc--------ceeEEe----eCCeeeceeEEecccc--------------cccCccC-
Q 007950 439 PVKVVEFELPRQQCVVY-LDLKRE--------ECAHLF----PAGRIYSQAFHLGGQG--------------FFLSAHC- 490 (583)
Q Consensus 439 p~ksVe~ydp~~~~W~~-L~~~R~--------~~~vav----l~gklYn~lYviGG~g--------------~~~dp~~- 490 (583)
+.+.+++||+.++.|.. +...+. .++.++ .+|+|| ++||.. ..|||..
T Consensus 367 ~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~----v~GG~~~~~~~~~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 367 PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKIL----TFGGSPDYQDSDATTNAHIITLGEPGTS 442 (656)
T ss_dssp SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEE----EECCBSSSSSSBCCCCEEEEECCSTTSC
T ss_pred CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEE----EEeCCCCCCCCCcCCcceEEEcCCCCCC
Confidence 46789999999999876 333222 233333 586666 999951 1346654
Q ss_pred --------CCCCCCCceEEEEE-ccc----cC---------CCCccccccccceeeecC---CceeecCCCCcceeccee
Q 007950 491 --------NMDQQSSFHCFGLF-LGM----QE---------KGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGK 545 (583)
Q Consensus 491 --------nM~~~R~~~~~~vl-~G~----~~---------~~~lssvVd~~~aErYdP---~W~~vapm~~~~~~~g~~ 545 (583)
.|+.+|..|+++++ +|+ .| ...+..+ |.||| +|+.+++|+.++..++.+
T Consensus 443 ~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v------~~ydp~t~~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 443 PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTP------EIYVPEQDTFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCC------EEEEGGGTEEEECCCCSSCCCTTEEE
T ss_pred CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccce------EEEcCCCCceeecCCCCCccccccHh
Confidence 48999999998887 665 11 1123443 99999 899999999999988866
Q ss_pred eecccccccccccceecCCceEEECCee
Q 007950 546 AVGYRNLFGIPWTAFMADDSIYFINGNL 573 (583)
Q Consensus 546 avg~~~~~~~~~~~~~~~~~~~~i~~~~ 573 (583)
++- .|+++|.+||..
T Consensus 517 ~ll-------------~dg~v~v~GG~~ 531 (656)
T 1k3i_A 517 LLL-------------PDGRVFNGGGGL 531 (656)
T ss_dssp EEC-------------TTSCEEEEECCC
T ss_pred hcC-------------CCcEEEecCCCC
Confidence 552 246778887753
No 44
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.79 E-value=2.7e-05 Score=67.21 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=62.8
Q ss_pred EEEEE---eeEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCCCCCcceEEEecCCCCHHH
Q 007950 147 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 223 (583)
Q Consensus 147 v~l~v---~~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~es~~~~v~l~~~~~~~~~ 223 (583)
|+|.. +.|.+++.+ |..|++++. |+.+++ |.....|.|+ +++..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~----------------------------ml~~~~-e~~~~~Iplp--~V~~~i 53 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKA----------------------------MIEGPF-RESKGRIELK--QFDSHI 53 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHH----------------------------HHHSST-TTCTTEEEET--TSCHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHH----------------------------HHhccc-ccCCCceecC--CcCHHH
Confidence 45554 369999997 889999999 998876 6556778887 999999
Q ss_pred HHHHHhhhccCc--------------cccCCcchHHHHHHHhchhhh
Q 007950 224 LMELLNFMYSST--------------LSTTTPTALLDVLMAADKFEV 256 (583)
Q Consensus 224 f~~lL~fiYtg~--------------l~i~~~~~v~~lL~aAd~~~v 256 (583)
|+.+++|+|.-. ..++. +++++|+.||++|++
T Consensus 54 L~kVieyc~~h~~~~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 54 LEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCCccccccCCCccCCH-HHHHHHHHHHHHhCc
Confidence 999999998744 13444 789999999999875
No 45
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.71 E-value=2.9e-05 Score=66.58 Aligned_cols=72 Identities=19% Similarity=0.246 Sum_probs=56.0
Q ss_pred eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhc-CC-CCCCcceEEEecCCCCHHHHHHHHhh
Q 007950 153 TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GM-RESEQRYVTLRIHASEEAALMELLNF 230 (583)
Q Consensus 153 ~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~-~es~~~~v~l~~~~~~~~~f~~lL~f 230 (583)
.|.+++.+ |..|++++. |+.+ +. .|+....|.|+ +++..+++.+++|
T Consensus 12 ~f~V~~~~-A~~S~~ik~----------------------------ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kViey 60 (96)
T 2fnj_C 12 EFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCMY 60 (96)
T ss_dssp EEEEEHHH-HTTSHHHHH----------------------------HHHCC--------CEEECS--SCCHHHHHHHHHH
T ss_pred EEEeCHHH-HHHhHHHHH----------------------------HHHccCCcccccCCceeCC--CCCHHHHHHHHHH
Confidence 69999997 789999999 9986 33 56666778877 9999999999999
Q ss_pred hccCc-----------cccCCcchHHHHHHHhchhhh
Q 007950 231 MYSST-----------LSTTTPTALLDVLMAADKFEV 256 (583)
Q Consensus 231 iYtg~-----------l~i~~~~~v~~lL~aAd~~~v 256 (583)
+|.-. ..++. +++.+|+.||++|++
T Consensus 61 c~~h~~~~~~~~~i~~w~vd~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 61 FTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHSCCSCCCCCCCCT-TTHHHHHHHHHHHTC
T ss_pred HHHccccCCCcccCCCcccCH-HHHHHHHHHHHHhCc
Confidence 98754 23555 899999999999975
No 46
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.57 E-value=0.00011 Score=64.11 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=71.4
Q ss_pred cEEEEEe--eEEcchhhhcccCc-ccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCC----CCCcceEEEecCC
Q 007950 146 STVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 218 (583)
Q Consensus 146 Dv~l~v~--~~~aHr~iLaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 218 (583)
-|+|.|+ .|...+..|+...+ +|.+ ||.+... .....++-+ |
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~----------------------------~~~~~~~~~~~~d~~~~~fi---D 55 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI---D 55 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHH----------------------------HHTTCGGGGGGBCTTSCEEE---C
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhH----------------------------HHhcCCCCCcCCCCCceEEe---c
Confidence 4677784 59999999987643 4555 7765321 113455666 7
Q ss_pred CCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 219 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 219 ~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
-+|..|+.+|+|+.+|++.+...-....++.-|++|++++|++.|.+.+.+
T Consensus 56 Rdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 56 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 899999999999999999876534568899999999999999999987753
No 47
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.56 E-value=6.4e-05 Score=71.05 Aligned_cols=106 Identities=10% Similarity=0.222 Sum_probs=75.6
Q ss_pred cEEEEE---eeEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCC----CCCcceEEEecCC
Q 007950 146 STVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 218 (583)
Q Consensus 146 Dv~l~v---~~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 218 (583)
-|+|.. ..|.+++.+ |..|.+++. |+..... +.....|.|+ +
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~----------------------------ml~~~~~~~~~~~~~~~Iplp--n 56 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKN----------------------------YLNDMGDDDDEDDDEIVMPVP--N 56 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHH----------------------------HHHC-----------CEEECT--T
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcCcccccccCCCceeeC--C
Confidence 345544 369999998 678999999 8875322 1223567776 9
Q ss_pred CCHHHHHHHHhhhccCc-------------------------cccCCcchHHHHHHHhchhhhcchhhhhhhccccC--C
Q 007950 219 SEEAALMELLNFMYSST-------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--P 271 (583)
Q Consensus 219 ~~~~~f~~lL~fiYtg~-------------------------l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~--~ 271 (583)
++..+|+.+++|++.-. +.++. +++.+|+.||++|++..|...|++.+.++ +
T Consensus 57 V~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikg 135 (169)
T 3v7d_A 57 VRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAEMIRG 135 (169)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcC
Confidence 99999999999997643 23444 78999999999999999999999988652 3
Q ss_pred CCchhhhhhccc
Q 007950 272 MTCESALLYLDL 283 (583)
Q Consensus 272 l~~~n~~~~l~~ 283 (583)
.+++..-.++.+
T Consensus 136 ktpeeiR~~f~I 147 (169)
T 3v7d_A 136 RSPEEIRRTFNI 147 (169)
T ss_dssp CCHHHHHHHHTC
T ss_pred CCHHHHHHHcCC
Confidence 445544444443
No 48
>1by2_A MAC-2 binding protein; extracellular module, scavenger receptor, tumour-associated extracellular matrix, glycosylated protein; HET: NAG; 2.00A {Homo sapiens} SCOP: d.170.1.1
Probab=97.55 E-value=3.4e-06 Score=75.39 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=54.0
Q ss_pred CCCCCcccccCCccccceeeEeeccCCCCCCCCCCCCchhhhhhhhhhhhhhhhhhcCCcccccceeecccccc
Q 007950 23 PDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMP 96 (583)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~ 96 (583)
.+||++|+.+||+++||+|++..+..++.+..+|.|.++| |. +.+.|.+.|..+.+|...
T Consensus 33 tVCdd~W~~~~A~VvCRqLG~~~a~~~~~~~~fg~g~g~i--~l------------d~v~C~G~E~sL~~C~~~ 92 (119)
T 1by2_A 33 TVCDNLWDLTDASVVCRALGFENATQALGRAAFGQGSGPI--ML------------DEVQCTGTEASLADCKSL 92 (119)
T ss_dssp EEBCTTCCHHHHHHHHHHTTCSCEEEEECTTTTCCCCSCE--EE------------CSCBCCSCCSSGGGSBCS
T ss_pred EEEcCcCcchHeEEEEEecCCCccccccccceeccCCCCE--EE------------ecCEecCCCCcHHhCCCC
Confidence 6999999999999999999999888777788999999998 88 788899999999999653
No 49
>2oya_A Macrophage receptor marco; extracellular matrix, scavenger receptor cysteine-rich (SRCR macrophage receptor, ligand binding, basic cluster; 1.77A {Mus musculus} PDB: 2oy3_A
Probab=97.09 E-value=1.5e-05 Score=69.32 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=49.7
Q ss_pred CCCCCcccccCCccccceeeEeeccCCCCCCCCCCCCchhhhhhhhhhhhhhhhhhcCCcccccceeecccccc
Q 007950 23 PDSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMP 96 (583)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~ 96 (583)
.+||++|+.+||+++||+|++.. ++..+.+|.|.++| |. +.+.|.+.|..+.+|...
T Consensus 28 tVCdd~w~~~~A~VvCRqLG~~~---a~~~~~fg~g~g~i--~l------------d~v~C~G~E~sL~~C~~~ 84 (102)
T 2oya_A 28 TICDDDWDNNDATVFCRMLGYSR---GRALSSYGGGSGNI--WL------------DNVNCRGTENSLWDCSKN 84 (102)
T ss_dssp EEBCTTCCHHHHHHHHHHTTCSC---EEEETTCCCCCSCE--EE------------CSCBCCSCCSSGGGSBCS
T ss_pred EEECCcCCHHHhhhhhhhhcCCC---CCCccccCCCCCCe--EE------------ecCEeCCCCCCHHHCCCC
Confidence 69999999999999999999987 34467889998898 88 788899999999999654
No 50
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.69 E-value=0.001 Score=58.65 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=54.2
Q ss_pred eEEcchhhhcccCcccccccCCccccccchhhhHHHHHHHHHHHHHHhhc--CCCCCCcceEEEecCCCCHHHHHHHHhh
Q 007950 153 TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEEAALMELLNF 230 (583)
Q Consensus 153 ~~~aHr~iLaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~--~~~es~~~~v~l~~~~~~~~~f~~lL~f 230 (583)
.|.+++.+ |..|+.++. |+.+ .+.|.....|.|+ +++..+|+.+++|
T Consensus 28 ~F~V~~~~-A~~S~tIk~----------------------------ml~~~~~~~e~~~~~Iplp--nV~s~iL~kViey 76 (112)
T 1vcb_B 28 EFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCMY 76 (112)
T ss_dssp EEEEEHHH-HHTSHHHHH----------------------------HSSCC--------CEEECS--SCCHHHHHHHHHH
T ss_pred EEEECHHH-HHHhHHHHH----------------------------HHHhcCCcccccCCceeCC--CCCHHHHHHHHHH
Confidence 69999995 678999999 9875 2245445667776 9999999999999
Q ss_pred hccCc-----------cccCCcchHHHHHHHhchhhh
Q 007950 231 MYSST-----------LSTTTPTALLDVLMAADKFEV 256 (583)
Q Consensus 231 iYtg~-----------l~i~~~~~v~~lL~aAd~~~v 256 (583)
++.-. ..++. +++++|+.||++|++
T Consensus 77 c~~h~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 77 FTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHSSCSSCCCCCCCCH-HHHHHHHHHHHHHTC
T ss_pred HHHhhhccCCcCCCCCcccCH-HHHHHHHHHHHHhCc
Confidence 97643 13555 799999999999975
No 51
>2jop_A T-cell surface glycoprotein CD5; domain 1, scavenger receptor cysteine rich, SRCR, immune system; NMR {Homo sapiens} PDB: 2jp0_A
Probab=96.39 E-value=0.00026 Score=64.03 Aligned_cols=56 Identities=13% Similarity=-0.066 Sum_probs=47.3
Q ss_pred CCCCCccc--------ccCCccccceeeEeeccCCCCCCCCCCCCchhhhhhhhhhhhhhhhhhcCCcccccceeecccc
Q 007950 23 PDSDFGFA--------FNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCN 94 (583)
Q Consensus 23 ~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~ 94 (583)
.+||++|+ .+||+++||+|++..+..++....+|.|.++| | |.+.|..+.+|.
T Consensus 55 TVCdd~W~~~~~~w~~~~~A~VVCRqLG~g~a~~~~~~~~fg~g~g~I--~-----------------C~G~E~sL~~C~ 115 (131)
T 2jop_A 55 MVCSQSWGRSSKQWEDPSQASKVCQRLNCGDPLSLGPFLKTYTPQSSI--I-----------------CYGQLGSFSNCS 115 (131)
T ss_dssp ECCSSTBTCCCSSCSCCCSCHHHHHHTTSSSCEEEEECSSCSCTTTSE--E-----------------EBSSTTCCSCEE
T ss_pred EEECCcCccccccccchhhhhhhhhhcCCCchhhcccccccCCCCCCE--E-----------------EeCCCCCHHHCC
Confidence 69999999 99999999999999887776777899998887 5 677788888886
Q ss_pred ccC
Q 007950 95 MPD 97 (583)
Q Consensus 95 ~~~ 97 (583)
...
T Consensus 116 ~~~ 118 (131)
T 2jop_A 116 HSR 118 (131)
T ss_dssp ECC
T ss_pred CcC
Confidence 543
No 52
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.70 E-value=0.01 Score=57.40 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=70.6
Q ss_pred cEEEEEe--eEEcchhhhcccCc-ccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCCC----CCCcceEEEecCC
Q 007950 146 STVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 218 (583)
Q Consensus 146 Dv~l~v~--~~~aHr~iLaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~----es~~~~v~l~~~~ 218 (583)
=|+|.|+ .|...+..|..... +|.+ ||.+... .....++-+ |
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~----------------------------lfs~~~~~~~~~De~geyFI---D 61 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI---D 61 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHH----------------------------HHSCCCC----BCTTCCEEE---C
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHH----------------------------HhcCccccCcccCCCccEEe---c
Confidence 4566774 58899999976532 5555 7765321 112455666 7
Q ss_pred CCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 219 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 219 ~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
-++..|+.+|+|+.+|++.+...-....++.-|++|+|+.|.+.|.+.|.+
T Consensus 62 RDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 62 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp SCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 899999999999999999876534567899999999999999999998864
No 53
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.56 E-value=0.051 Score=47.85 Aligned_cols=93 Identities=10% Similarity=0.046 Sum_probs=65.3
Q ss_pred cEEEEEe--eEEcchhhhcccCc-ccccccCCccccccchhhhHHHHHHHHHHHHHHhhcCC-CCCCcceEEEecCCCCH
Q 007950 146 STVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM-RESEQRYVTLRIHASEE 221 (583)
Q Consensus 146 Dv~l~v~--~~~aHr~iLaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~es~~~~v~l~~~~~~~ 221 (583)
-|+|.|+ .|...+..|..... .+.+ ||++.. .....+++-+ +-++
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~----------------------------l~~~~~~~~~~~g~~Fi---DRdp 54 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSR----------------------------LTEGMLNYDPVLNEYFF---DRHP 54 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTT----------------------------CCTTSTTEETTTTEEEE---CSCT
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHH----------------------------HhcCCCCCCCCCCcEEE---ecCh
Confidence 4677885 58889999976532 2333 554321 1123466766 7899
Q ss_pred HHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchhh--hhhhcccc
Q 007950 222 AALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMR--YCSRLLRN 269 (583)
Q Consensus 222 ~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~~--~C~~~L~~ 269 (583)
..|+.+|+|+.+|++.+.....+..++.-|++|+|+...- -|...+.+
T Consensus 55 ~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 55 GVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp TTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGSHHHHS
T ss_pred HHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 9999999999999998765346789999999999988653 35444444
No 54
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=94.28 E-value=0.0044 Score=68.90 Aligned_cols=57 Identities=12% Similarity=0.017 Sum_probs=45.8
Q ss_pred CCCCCcccccCCccccceeeEeeccCCCC-CCCCCCCCchhhhhhhhhhhhhhhhhhcCCcccccceeeccc
Q 007950 23 PDSDFGFAFNDSNFSDRVLRIEIMPDLPD-SKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQC 93 (583)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~~~~~~~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c 93 (583)
.+||++|+.+||+|+||+|++..+..+.. ...+|.|-++| |. +.+.|.+.|..+.+|
T Consensus 121 tVCd~~w~~~~A~VvCrqLG~~~~~~~~~~~~~~~~g~g~~--~~------------~~v~C~G~E~sl~~C 178 (565)
T 2xrc_A 121 FICKSSWSMREANVACLDLGFQQGADTQRRFKLSDLSINST--EC------------LHVHCRGLETSLAEC 178 (565)
T ss_dssp EBCTTSCCHHHHHHHHHHTTCTTCBCSSCCCCCCSSSCCCC--CC------------BEEECCSCCSCGGGS
T ss_pred eeeCCCCChhhceehhhhcCCchhhhhhcccccCCCCcCcc--eE------------EEeEeCCccCchhhc
Confidence 59999999999999999999998876533 44566777787 77 566677788877777
No 55
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.55 E-value=0.19 Score=44.74 Aligned_cols=52 Identities=10% Similarity=0.097 Sum_probs=42.8
Q ss_pred cceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchh-hhh
Q 007950 209 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYC 263 (583)
Q Consensus 209 ~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~-~~C 263 (583)
.+++-+ |-++..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. ..|
T Consensus 52 ~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 52 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDC 104 (124)
T ss_dssp SCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHH
T ss_pred CCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHH
Confidence 456666 7899999999999999999876534678999999999999874 444
No 56
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=93.10 E-value=0.12 Score=44.70 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=42.9
Q ss_pred cceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchh-hhhh
Q 007950 209 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYCS 264 (583)
Q Consensus 209 ~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~-~~C~ 264 (583)
.+++-+ |=++..|+.+|+|+-+|++.+.....+..++.-|++|+++.+. ..|+
T Consensus 39 ~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 39 TQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp GTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred CCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 456666 7899999999999999999876534578999999999998864 4443
No 57
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.01 E-value=0.24 Score=45.04 Aligned_cols=54 Identities=9% Similarity=0.111 Sum_probs=43.7
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhccCccccCCcchHHHHHHHhchhhhcchh-hhhh
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM-RYCS 264 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~~~v~~l~-~~C~ 264 (583)
..+++-+ |-++..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. ..|+
T Consensus 73 ~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 73 DTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 127 (140)
T ss_dssp TTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTT
T ss_pred CCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 3456766 7899999999999999999876534588999999999999873 4443
No 58
>2ja4_A T-cell surface glycoprotein CD5; SRCR, membrane, polymorphism, crystallography, transmembrane, innate immunity, phosphorylation, immune system; 2.21A {Homo sapiens} PDB: 2ott_X
Probab=92.51 E-value=0.0048 Score=53.22 Aligned_cols=36 Identities=8% Similarity=-0.152 Sum_probs=29.7
Q ss_pred CCCCCcccccCC--ccccceeeEeeccCCCCCCCCCCC
Q 007950 23 PDSDFGFAFNDS--NFSDRVLRIEIMPDLPDSKSDGDA 58 (583)
Q Consensus 23 ~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~g~~ 58 (583)
.+||++|+.+|+ +++||+|++..+.+++....+|.|
T Consensus 31 tVCdd~w~~~~A~~~VvCrqLG~g~a~~~~~~~~fg~g 68 (101)
T 2ja4_A 31 ALCDSSSARSSLRWEEVCREQQCGSVNSYRVLDAGDPT 68 (101)
T ss_dssp EEECCCSSCCSHHHHHHHHHTTCCSEEEEEEESTTCTT
T ss_pred EEECCCCChhHCcccEEEEecCCCchhhceeccccCCc
Confidence 699999999999 999999999877665555556654
No 59
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=88.28 E-value=0.62 Score=39.84 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=41.3
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhcc-CccccCCcchHHHHHHHhchhhhcchh
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM 260 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYt-g~l~i~~~~~v~~lL~aAd~~~v~~l~ 260 (583)
..+++-+ |-++..|+.+|+|+-| |++.+.....+..++.-|++|+++.+.
T Consensus 40 ~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 40 LRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp TTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred CceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 3456766 7899999999999999 899876535678999999999998754
No 60
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=73.37 E-value=0.51 Score=42.27 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=29.7
Q ss_pred hhhhhhhhhhhhhhhhcCCcccccceeeccccccCCC
Q 007950 63 ADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTE 99 (583)
Q Consensus 63 ~~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~~ 99 (583)
.+||+.+|++|++|+.....++.+|+.+|+|.+.+..
T Consensus 108 ~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 108 KDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp CEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 3599999999999963333468999999999887654
No 61
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=68.63 E-value=0.9 Score=41.40 Aligned_cols=35 Identities=11% Similarity=0.263 Sum_probs=28.7
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCCCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTED 100 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~~~ 100 (583)
+||+.+|++|++|++.+ ++.+|+.+|+|.+.+..|
T Consensus 124 ~~G~~~Fi~~~~L~~~~--yl~dD~l~I~~~V~v~~~ 158 (160)
T 1lb6_A 124 GFGYVTFMHLEALRQRT--FIKDDTLLVRCEVSTRFD 158 (160)
T ss_dssp EEEEEEEEEGGGGGTSC--CCBTTBEEEEEEEEC---
T ss_pred CcCEeeEeEHHHhhhCC--CccCCEEEEEEEEEEeec
Confidence 59999999999999765 589999999998876543
No 62
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=63.77 E-value=1.5 Score=41.79 Aligned_cols=35 Identities=3% Similarity=-0.045 Sum_probs=30.2
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCCCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTED 100 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~~~ 100 (583)
+||+.+|++|++|++.+ ++.+|+.+|+|.+.+.+.
T Consensus 155 ~wG~~~Fi~~~~L~~~g--yL~dD~l~I~~~V~v~~~ 189 (198)
T 4ghu_A 155 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTSDL 189 (198)
T ss_dssp CEEEEEEEEHHHHHHTT--SCBTTBEEEEEEECCTTC
T ss_pred CcCchhEeEHHHhhhcC--CeeCCEEEEEEEEEeccC
Confidence 59999999999999755 589999999998876643
No 63
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=58.86 E-value=2 Score=40.03 Aligned_cols=35 Identities=9% Similarity=0.016 Sum_probs=29.1
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDT 98 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~ 98 (583)
+||+.+|++|++|++....++.+|+.+|+|.+..+
T Consensus 139 ~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~ 173 (178)
T 4gjh_A 139 ASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLT 173 (178)
T ss_dssp CEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCT
T ss_pred CcChhheeEHHHhhccccCcCcCCEEEEEEEEEec
Confidence 59999999999999733447999999999988543
No 64
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=58.42 E-value=6.3 Score=32.78 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.4
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHhc
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARY 308 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~f 308 (583)
.++.+|+..++.+|+.| .++.|++.|.+|+.+++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETSL 109 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhhC
Confidence 57789999999999998 78999999999998763
No 65
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.05 E-value=4.7 Score=34.12 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=29.8
Q ss_pred cccCCcchHHHHHHHhchhhhcchhhhhhhcccc
Q 007950 236 LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 269 (583)
Q Consensus 236 l~i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~ 269 (583)
-.++. +|...++..|+.|+++.|++.|.+|+..
T Consensus 6 ~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~ 38 (105)
T 2eqx_A 6 SGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT 38 (105)
T ss_dssp CCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34666 8999999999999999999999999986
No 66
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=55.87 E-value=2.4 Score=40.04 Aligned_cols=33 Identities=3% Similarity=-0.035 Sum_probs=28.9
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDT 98 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~ 98 (583)
+||+.+|++|++|++.+ ++.+|+.+|+|.+..+
T Consensus 155 ~wG~~~Fi~~~~L~~~g--yl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 155 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CEEEEEEEEHHHHHHTT--SCBTTEEEEEEEECCT
T ss_pred CCChHHEeEHHHhCcCC--CeeCCEEEEEEEEEcC
Confidence 59999999999999864 6899999999988654
No 67
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=55.69 E-value=2.1 Score=39.12 Aligned_cols=34 Identities=3% Similarity=-0.103 Sum_probs=29.1
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDT 98 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~ 98 (583)
+||+.+|++|++|++.. .++.+|+.+++|.+..+
T Consensus 133 ~~G~~~Fi~~~~L~~~~-gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 133 ASGCPLFCPVSKMEAKN-SYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp CEEEEEEEETTTTTSSS-SSSBTTEEEEEEEECCT
T ss_pred CcCcceEeEHHHhcccC-CceeCCEEEEEEEEEec
Confidence 59999999999999762 46899999999988654
No 68
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=49.73 E-value=3.3 Score=38.89 Aligned_cols=33 Identities=6% Similarity=-0.058 Sum_probs=28.4
Q ss_pred hhhhhhhhhhhhhh-hcCCcccccceeeccccccCC
Q 007950 64 DWARNRKRRREEIK-KDTVDVLVQREQILQCNMPDT 98 (583)
Q Consensus 64 ~w~~~~~~~r~~~~-~~~~~~~~~~~~~~~c~~~~~ 98 (583)
+||+.+|++|++|+ +. .++.+|+.+|+|.+.++
T Consensus 157 ~wG~~~Fi~~~~L~~~~--gyl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 157 ASGCPLFCPVSKMEAKN--SYVRDDAIFIKAIVDLT 190 (192)
T ss_dssp CEEEEEEEETHHHHSSC--SSCBTTEEEEEEEECCT
T ss_pred CcChhheeEHHHhhhcc--CCEeCCEEEEEEEEEec
Confidence 59999999999999 44 36899999999988764
No 69
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=49.41 E-value=2.9 Score=37.64 Aligned_cols=34 Identities=9% Similarity=0.166 Sum_probs=28.3
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPD 97 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~ 97 (583)
+||+.+|+++++|+.....++.+|+.+++|.+.+
T Consensus 114 ~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V 147 (155)
T 2foj_A 114 DWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 147 (155)
T ss_dssp EEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEE
T ss_pred CEeECCeEEHHHhcCcCCCceECCEEEEEEEEEE
Confidence 5999999999999843334789999999998765
No 70
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=48.83 E-value=3.7 Score=39.83 Aligned_cols=34 Identities=3% Similarity=-0.007 Sum_probs=29.4
Q ss_pred hhhhhhhhhhhhhhhcCCcccccceeeccccccCCC
Q 007950 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTE 99 (583)
Q Consensus 64 ~w~~~~~~~r~~~~~~~~~~~~~~~~~~~c~~~~~~ 99 (583)
+||+.+|++|++|++.+ ++.+|+.+|+|.+.+++
T Consensus 191 ~wG~~~Fi~~~~L~~~g--yL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 191 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCSEEEEEEHHHHSSST--TCCSSEEEEEEECCCTT
T ss_pred CcCHHHeeEHHHHccCC--CccCCEEEEEEEEEccc
Confidence 59999999999999754 68999999999887654
No 71
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=44.53 E-value=33 Score=33.59 Aligned_cols=94 Identities=9% Similarity=0.086 Sum_probs=60.9
Q ss_pred cCCcchHHHHHHHhchhhhcchhhhhhhccccCCC------------CchhhhhhcccchhhhhhhccHHHHHHHHHHHH
Q 007950 238 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM------------TCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 305 (583)
Q Consensus 238 i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l------------~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~ 305 (583)
++. +|+..++..|+.|+++.|+..|.+++.. +. +.+....++.--+.. ...-..+.+++.+|+.
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~-~f~~v~~~~~f~~L~~~~l~~lL~~d~L~--v~sE~~vf~av~~W~~ 214 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRR-NFHKVIQDEEFYTLPFHLIRDWLSDLEIT--VDSEEVLFETVLKWVQ 214 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-THHHHTTSSGGGGSCHHHHHHHHTCSSCC--CSCHHHHHHHHHHHHH
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHH-HHHHHhcCcChhcCCHHHHHHHhcCcCCC--CCCHHHHHHHHHHHHH
Confidence 566 8999999999999999999999998875 32 222222222211100 0013467788888987
Q ss_pred Hhc-------ccccccchhhhCCCHHHHHHHhcCCCcc
Q 007950 306 ARY-------KDISKFQEEVLNLPLAGIEAVLASDDLQ 336 (583)
Q Consensus 306 ~~f-------~~v~~~~~~f~~L~~~~l~~lL~sd~L~ 336 (583)
.+. .++.+ .=-|..++.+.|..++..+.+-
T Consensus 215 ~~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 215 RNAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp TTHHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHHH
T ss_pred cCHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccchh
Confidence 442 33333 3456678888888887766554
No 72
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=39.02 E-value=11 Score=33.91 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.5
Q ss_pred cCCcchHHHHHHHhchhhhcchhhhhhhccccCCC
Q 007950 238 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 272 (583)
Q Consensus 238 i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l 272 (583)
++. +++.+++..|+.|+++.|+..|.+|+.+ ++
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 455 8999999999999999999999999987 44
No 73
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=38.15 E-value=16 Score=31.21 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.2
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHh
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 307 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~ 307 (583)
.++.+|+..++.+|+.+ .++.|++.|.+||.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57789999999999998 7899999999999764
No 74
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=38.02 E-value=8.7 Score=33.68 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=31.1
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHhcc
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYK 309 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~f~ 309 (583)
.++.+|+..++..|+.+ .++.|++.|.+||..++.
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhcc
Confidence 57889999999999998 789999999999987764
No 75
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=37.68 E-value=1.7 Score=45.20 Aligned_cols=26 Identities=4% Similarity=-0.277 Sum_probs=22.8
Q ss_pred CCCCCcccccCCccccceeeEeeccC
Q 007950 23 PDSDFGFAFNDSNFSDRVLRIEIMPD 48 (583)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~ 48 (583)
.+||++|+.++++++||+|++..+..
T Consensus 30 ~vC~d~w~~~~a~v~C~~lg~~~~~~ 55 (372)
T 1z8g_A 30 LLCSSRSNARVAGLSCEEMGFLRALT 55 (372)
T ss_dssp EEBCCTTHHHHHHHHHHHHTCSCEEE
T ss_pred cccCCCCCchhhhhhhhhcCccccce
Confidence 69999999999999999999865443
No 76
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=33.79 E-value=10 Score=33.15 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=28.5
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHhccccc
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDIS 312 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~f~~v~ 312 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999998 789999999999988876543
No 77
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=31.10 E-value=41 Score=36.54 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=41.1
Q ss_pred CcceEEEecCCCCHHHHHHHHhhhcc-CccccCCcchHHHHHHHhchhhhcchh
Q 007950 208 EQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM 260 (583)
Q Consensus 208 ~~~~v~l~~~~~~~~~f~~lL~fiYt-g~l~i~~~~~v~~lL~aAd~~~v~~l~ 260 (583)
..+++-+ |=++..|+.+|+|+.| |++.....-....++.-|++|+++++.
T Consensus 91 ~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 91 LRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred CCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCCHHH
Confidence 3456766 7899999999999999 999876534567789999999998765
No 78
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=31.10 E-value=33 Score=29.05 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=29.1
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHh
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 307 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~ 307 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57789999999999998 7899999999999753
No 79
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=29.70 E-value=17 Score=30.95 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=27.2
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHHHh
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 307 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~~~ 307 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57789999999999998 7899999999998765
No 80
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=29.59 E-value=29 Score=29.38 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=27.7
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHH
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 305 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~ 305 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57789999999999998 78999999999984
No 81
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=28.44 E-value=31 Score=28.86 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=27.7
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHHH
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 305 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi~ 305 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57789999999999998 78999999999984
No 82
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=28.21 E-value=20 Score=35.72 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.5
Q ss_pred cCCcchHHHHHHHhchhhhcchhhhhhhccccCCC
Q 007950 238 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 272 (583)
Q Consensus 238 i~~~~~v~~lL~aAd~~~v~~l~~~C~~~L~~~~l 272 (583)
++. +++..++.+|++|+++.|+..|.+|+.. ++
T Consensus 272 ~~~-~n~~~~l~~A~~~~~~~L~~~~~~~i~~-~~ 304 (312)
T 3hqi_A 272 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 304 (312)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HH
Confidence 455 8999999999999999999999999987 44
No 83
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=25.86 E-value=39 Score=28.32 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=26.9
Q ss_pred CCCchhhhhhcccchhhhhhhccHHHHHHHHHHH
Q 007950 271 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 304 (583)
Q Consensus 271 ~l~~~n~~~~l~~a~~~~~~~~~~~L~~~~~~fi 304 (583)
.++.+|+..++..|+.+ ..+.|++.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 46789999999999998 7899999999987
Done!