BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007953
(583 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUM4|Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana
GN=At3g27390 PE=1 SV=2
Length = 588
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/595 (63%), Positives = 468/595 (78%), Gaps = 19/595 (3%)
Query: 1 MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
MEPP GF ASL+ F+ FLPYFIGLL LG IKGI+ CP++CL++TIGNSA+IL LLP H++
Sbjct: 1 MEPPIGFRASLFQFLLFLPYFIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIV 60
Query: 61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
WT+Y I+ AKQ+GP+LK+ C+C+P +ILWP+V I S++GGALYGF SPIFATFDAVG
Sbjct: 61 WTFYSIVSAKQVGPILKIFLCLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAVG 120
Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
EGK FHCFYDGTWST++ SFT+VRDFKDVCFHSYFSLMD+L+Q PD KYYEIRLL
Sbjct: 121 EGKPYQFFHCFYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQ-SCPDRKYYEIRLL 179
Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
+PGA++ LG+L+D PVIS+VA+CKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QLPGALVVSVLGILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
LAI+LWPLAV GAV+GS+++SIFLGAYAGVV YQESS ++GL YI+A++SIYDEYS DIL
Sbjct: 240 LAILLWPLAVTGAVIGSVISSIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDIL 299
Query: 301 DMPEGSCFPRPQYRKKADLSRTSTFSRP----SSFKDPPS-RTSSLRKP-IDLKPLELLE 354
D+PEGSCFPRP+YR+K + + FS P S K+ S R S+R P ID+KPL+LL
Sbjct: 300 DLPEGSCFPRPKYRRKDE--EPTPFSGPVPRLGSVKNASSMRGGSVRVPMIDIKPLDLLN 357
Query: 355 RLFKECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGI 414
LF EC+R+GE+ ++GLI +KDIE+A+S+ GSQV+S+GLPAY LL +LRS ANS G+
Sbjct: 358 ELFVECRRYGEVLATKGLINSKDIEEARSSKGSQVISVGLPAYGLLYEILRSVKANSSGL 417
Query: 415 LLSDSVTEITSSNRPKDVFFDWFFNPFLIIKEQIKAENLTEAEEDYLSKLVLFCGNIGRL 474
LLSD VTEIT+ NRPKDVFFDWF NPFLI+KEQ+KA NL+E EE+YL +LVL G+ RL
Sbjct: 418 LLSDGVTEITTMNRPKDVFFDWFLNPFLILKEQMKATNLSEEEEEYLGRLVLLFGDPERL 477
Query: 475 KDLN---VSPPESERKRAELGALARRLQGITKSVSRYPTFRRQFDDLVKTLTEDLAKKNG 531
K N SPP +ERKRAEL A ARR+QG+TK+VSRYPTFRR F LVK L+EDL K+
Sbjct: 478 KSSNAISASPPLTERKRAELDAFARRMQGLTKTVSRYPTFRRHFVALVKKLSEDLDLKDN 537
Query: 532 GS---ESTNVPKTMQKSNSALARFQKSFKRLTSSNNGRYEESQSQSDALRDLEIL 583
S ES P K S + Q+SF+R S N + +SQ R+++I+
Sbjct: 538 NSAKDESITEPPAPVKIISRIFS-QRSFRRKGSVNG---SDQESQKGVSRNVDIV 588
>sp|P12883|MYH7_HUMAN Myosin-7 OS=Homo sapiens GN=MYH7 PE=1 SV=5
Length = 1935
Score = 36.2 bits (82), Expect = 0.82, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 442 LIIKEQIKAENLTEAEE--DYLSKLVLFCGNIGRLKDLNVSPPESERKRAELGALARRLQ 499
L ++ Q + +NL +AEE D L K + ++K++N + E AEL A R+L+
Sbjct: 887 LQLQVQAEQDNLADAEERCDQLIKNKIQLE--AKVKEMNERLEDEEEMNAELTAKKRKLE 944
Query: 500 GITKSVSRYPTFRRQFDDLVKTLTEDLAKKNGGSES--TNVPKTMQKSNSALARFQKSFK 557
+R DDL TL + + K+ +E+ N+ + M + +A+ K K
Sbjct: 945 ------DECSELKRDIDDLELTLAK-VEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKK 997
Query: 558 RLTSSNNGRYEESQSQSDALRDL 580
L ++ ++ Q++ D + L
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTL 1020
>sp|P02565|MYH3_CHICK Myosin-3 OS=Gallus gallus GN=MYH3 PE=2 SV=3
Length = 1940
Score = 35.4 bits (80), Expect = 1.2, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 442 LIIKEQIKAENLTEAEE--DYLSKLVLFCGNIGRLKDLNVSPPESERKRAELGALARRLQ 499
L ++ Q +A+ L +AEE D L K + ++K+L + E AEL A R+L+
Sbjct: 892 LQLQVQAEADGLADAEERCDQLIKTKIQLE--AKIKELTERAEDEEEMNAELTAKKRKLE 949
Query: 500 GITKSVSRYPTFRRQFDDLVKTLTEDLAKKNGGSES--TNVPKTMQKSNSALARFQKSFK 557
++ DDL TL + + K+ +E+ N+ + M + +A+ K K
Sbjct: 950 ------DECSELKKDIDDLELTLAK-VEKEKHATENKVKNLTEEMAALDETIAKLTKEKK 1002
Query: 558 RLTSSNNGRYEESQSQSDALRDL 580
L ++ ++ Q++ D + L
Sbjct: 1003 ALQEAHQQTLDDLQAEEDKVNTL 1025
>sp|A7E2Y1|MYH7B_HUMAN Myosin-7B OS=Homo sapiens GN=MYH7B PE=2 SV=3
Length = 1941
Score = 34.7 bits (78), Expect = 2.1, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 442 LIIKEQIKAENLTEAEED----YLSKLVLFCGNIGRLKDLNVSPPESERKRAELGALARR 497
L ++ Q + +NL +AEE SK+ L G++K+L+ + E A+L A R+
Sbjct: 894 LALQLQAEQDNLADAEERCHLLIKSKVQLE----GKVKELSERLEDEEEVNADLAARRRK 949
Query: 498 LQGITKSVSRYPTFRRQFDDLVKTLTEDLAKKNGGSEST-NVPKTMQKSNSALARFQKSF 556
L+ ++ DDL TL + +K N+ + M + ++AR K
Sbjct: 950 LE------DECTELKKDIDDLKLTLAKAEKEKQATENKVKNLTEEMAALDESVARLTKEK 1003
Query: 557 KRLTSSNNGRYEESQSQSDALRDL 580
K L ++ + Q++ D + L
Sbjct: 1004 KALQEAHQQALGDLQAEEDRVSAL 1027
>sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=5
Length = 1939
Score = 33.9 bits (76), Expect = 3.9, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 442 LIIKEQIKAENLTEAEE--DYLSKLVLFCGNIGRLKDLNVSPPESERKRAELGALARRLQ 499
L ++ Q + +NL +AEE D L K + ++K++N + E AEL A R+L+
Sbjct: 889 LQLQVQAEQDNLNDAEERCDQLIKNKIQLE--AKVKEMNERLEDEEEMNAELTAKKRKLE 946
Query: 500 GITKSVSRYPTFRRQFDDLVKTLTEDLAKKNGGSES--TNVPKTMQKSNSALARFQKSFK 557
++ DDL TL + + K+ +E+ N+ + M + +A+ K K
Sbjct: 947 ------DECSELKKDIDDLELTLAK-VEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKK 999
Query: 558 RLTSSNNGRYEESQSQSDALRDL 580
L ++ ++ Q + D + L
Sbjct: 1000 ALQEAHQQALDDLQVEEDKVNSL 1022
>sp|Q60651|KLRA4_MOUSE Killer cell lectin-like receptor 4 OS=Mus musculus GN=Klra4 PE=2
SV=2
Length = 263
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 149 FKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLLYIPGAIIAGGLGVLIDVPVISVVALCKS 208
F V FH L +++R K+ + +R+ +P +I LG+LI + +++V L +
Sbjct: 8 FSAVRFHKSSGLQNEMRLKETRKPEKARLRVCSVPWQLIVIALGILISLRLVTVAVLMTN 67
Query: 209 PYMLFKGWHRL 219
+ + H L
Sbjct: 68 IFQYGQQKHEL 78
>sp|P39438|UPPP_AZOBR Undecaprenyl-diphosphatase (Fragment) OS=Azospirillum brasilense
GN=uppP PE=3 SV=1
Length = 187
Score = 33.5 bits (75), Expect = 5.0, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 15 ICFLPYFI-GLLLLGIIKGIIFCP-VICLMMTIGNSAIILG--LLPAHVLWTYYCILRAK 70
+ FLP + G L G+IK ++F P V+ + + +G AI++ L+PA Y+ I R
Sbjct: 89 LAFLPAMVLGAALHGVIKAVLFNPTVVSIALILGGVAILMAERLVPAP---RYHQIERFP 145
Query: 71 QLGPV-LKLLTCICIPVFLILWPVVS-IGASIIGGALYG 107
P+ LK+ C C L L P VS GA+I+G L G
Sbjct: 146 --APLALKIGLCQC----LALVPGVSRSGATILGSLLMG 178
>sp|Q3J1Q3|NUOH2_RHOS4 NADH-quinone oxidoreductase subunit H 2 OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=nuoH2 PE=3 SV=1
Length = 318
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 217 HRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVL--GSMVTSIFLGAYAGVVVYQ 274
HRL DL E + +G++ L+ L A+L ++ T++FLG +AG ++
Sbjct: 201 HRLPFDLQESEQDLVAGFMTEYSGMSFALFFLGEYLAILLVAALFTTLFLGGWAGPIL-- 258
Query: 275 ESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRK 315
+WFGL+ +AA+S+ + + PRP+Y +
Sbjct: 259 PGPIWFGLK--VAAISVVFVWLR--------AALPRPRYDQ 289
>sp|O14200|PXA1_SCHPO PXA domain protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pxa1 PE=2 SV=1
Length = 495
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 513 RQFDDLVKTLTEDLAKKN--GGSESTNVPKTMQKSNSALARFQKSFKRLTSSNNGRYEES 570
RQ+ + T ++ K N GGS+STNV + S S+ R +R+++S+ YE S
Sbjct: 273 RQWKQYILTSVSNMDKGNPSGGSQSTNVTTFRRFSQSSYPRRSNYRRRISTSSKSLYELS 332
Query: 571 QSQ 573
S+
Sbjct: 333 PSK 335
>sp|A3PKI6|NUOH2_RHOS1 NADH-quinone oxidoreductase subunit H 2 OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=nuoH2 PE=3 SV=1
Length = 318
Score = 32.3 bits (72), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 217 HRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVL--GSMVTSIFLGAYAGVVVYQ 274
HRL DL E + +G++ L+ L A+L ++ T++FLG +AG ++
Sbjct: 201 HRLPFDLQESEQDLVAGFMTEYSGMSFALFFLGEYLAILLVAALFTTLFLGGWAGPIL-- 258
Query: 275 ESSLWFGLRYIIAALSIYDEYSNDILDMPEGSCFPRPQYRK 315
+WFGL+ +AA+S+ + + PRP+Y +
Sbjct: 259 PGPVWFGLK--VAAISVVFVWLR--------AALPRPRYDQ 289
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,084,471
Number of Sequences: 539616
Number of extensions: 9364654
Number of successful extensions: 23988
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 23977
Number of HSP's gapped (non-prelim): 38
length of query: 583
length of database: 191,569,459
effective HSP length: 123
effective length of query: 460
effective length of database: 125,196,691
effective search space: 57590477860
effective search space used: 57590477860
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)