BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007955
(583 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356542909|ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 704
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/584 (75%), Positives = 488/584 (83%), Gaps = 40/584 (6%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIVFSRIQNLDPENASKIMG+LLLQDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQN-SSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPD 119
L SNSP +PSTP SPSPF++RQN ++SSRL G+N P LTIP+ +SW T +++L PD
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNLNTSSRLSGTNIPPALTIPNPSSWPT-MSELQTPD 119
Query: 120 DLIPQTTTTMNSS----ALPFYGNGTGSGSSDVIDEYQLQDQLSFLNE---SSQNLGNKN 172
DL+ + SS +LPFY NG SD IDE+QLQDQL+FLN+ +S L +KN
Sbjct: 120 DLMSPNHLVVGSSTSSLSLPFYANG----GSDPIDEFQLQDQLAFLNDGSPTSTALSHKN 175
Query: 173 Q-DLFYPSQMDLSSSPPNGATDSMLFPSY-WGGGSSVHRRSCSVSD-VLGSSSDDLNSGL 229
D+FYPS DLSSSP A D LFPSY WGG S+HRRSCSV+D LG+ +D NSGL
Sbjct: 176 NPDMFYPSNSDLSSSPTTAA-DPTLFPSYGWGG--SLHRRSCSVNDACLGT--EDPNSGL 230
Query: 230 GWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRS 289
GW+PCLYFARGYCKNG+SCRF+HGG +G D A +VGSPSK+E ++ CHELLRS
Sbjct: 231 GWKPCLYFARGYCKNGTSCRFLHGG-------LG-DADAAMVGSPSKIEMMEQCHELLRS 282
Query: 290 KSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHK 349
KS QQQRLAAASQLM SS+FPYSPK MN LQQQQNDTQRAAAAA LM++ED+HK
Sbjct: 283 KSG-----QQQRLAAASQLMASSTFPYSPKCMNFLLQQQQNDTQRAAAAA-LMMSEDLHK 336
Query: 350 FGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 409
FGRSRLERNDFS+N S G+VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ
Sbjct: 337 FGRSRLERNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 395
Query: 410 QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRK-QQQQVERGE 468
QKRMFGFVTFVYPETVK+IL+KGNPHFVCDARVLVKPYKEKGKVPDKYRK QQQQV+RG+
Sbjct: 396 QKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKLQQQQVDRGD 455
Query: 469 FSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQL 528
FSPCGTPTGLD+RD FDLQLG RMFY NTQDMLWRRK+EEQADLQQALELQSRRLMGLQL
Sbjct: 456 FSPCGTPTGLDARDQFDLQLGGRMFY-NTQDMLWRRKLEEQADLQQALELQSRRLMGLQL 514
Query: 529 LDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
LD+KK HH RALS GSPIPSPTHSPN+F+QNLV P H +S P
Sbjct: 515 LDIKK-HHQRALSAGSPIPSPTHSPNMFNQNLV-PSFHITSEAP 556
>gi|356529848|ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 696
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/578 (73%), Positives = 474/578 (82%), Gaps = 38/578 (6%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATR+VFSRIQNLDPENASKIMGLLLLQDHGEKE+IRLAFGPEALVHSVILKARKE
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPS-GTSWSTAVTDLPNPD 119
L SNSP++ ST SPSP+L++QNS+SSRL LTIP+ SW T +++L PD
Sbjct: 61 LGLPSNSPHTTSTLPSPSPYLSKQNSTSSRLSA------LTIPNPSASWPT-MSELQTPD 113
Query: 120 DLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNE---SSQNLGNKNQDLF 176
DL+ + T+ SS+LP+Y NG SD +DE+QLQDQL+FLN+ +S + N N DLF
Sbjct: 114 DLVAGSLTS--SSSLPYYANG----GSDPVDEFQLQDQLAFLNDGSNTSTSHKNNNPDLF 167
Query: 177 YPSQMDLSSSPPNGATDSMLFPS-YWGGGSSVHRRSCSVSD-VLGSSSDDLNSGLGWRPC 234
YP+ SS P A D LFPS WGG S+HRRSCSVSD LGS +D NSGLGW+PC
Sbjct: 168 YPNNNSDLSSSPTTAADPTLFPSDGWGG--SLHRRSCSVSDACLGS--EDPNSGLGWKPC 223
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
LYFARGYCKNG+SCRF+HGG + AA +VGSPSK+E ++ CHELLRSKS
Sbjct: 224 LYFARGYCKNGTSCRFLHGGLGDA---DVGGAAAAMVGSPSKIEMMEQCHELLRSKS--- 277
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
QQQRLAAASQLM SS FPYSPKSMN LQQQQNDTQRAAAAA LM++ED+HKFGRSR
Sbjct: 278 --FQQQRLAAASQLMASSIFPYSPKSMNFLLQQQQNDTQRAAAAA-LMMSEDLHKFGRSR 334
Query: 355 LERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 414
LERNDFS+N S +VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF
Sbjct: 335 LERNDFSLN-SPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 393
Query: 415 GFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGT 474
GFVTFVYPETVK+IL+KGNPHFVCDARVLVKPYKEKGKVPDK KQQQQV+RG+FSPCGT
Sbjct: 394 GFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQQVDRGDFSPCGT 451
Query: 475 PTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH 534
PTGLD+RD FDLQLG RM Y NTQDMLWRRK+EEQADLQQALELQSRRLMGLQLLD+KK
Sbjct: 452 PTGLDARDQFDLQLGGRMLY-NTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK- 509
Query: 535 HHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
HH RALSTGSPIPSPTHSPN+F+QN+V P H +S P
Sbjct: 510 HHQRALSTGSPIPSPTHSPNMFNQNIV-PSFHINSESP 546
>gi|356531625|ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 700
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/578 (74%), Positives = 480/578 (83%), Gaps = 32/578 (5%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIVFSRIQNLDPENASKIMG+LLLQDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L SNSP +PSTP SPSPFL+RQNS+SSRL G N P LTIP+ +SW T DL +P+
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFLSRQNSTSSRLSGINIPPALTIPNPSSWPTMSDDLMSPNH 120
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNE---SSQNLGNK-NQDLF 176
L+ ++ +SS+LP+Y N G SD ID++QLQDQLSFLN+ +S +K N DLF
Sbjct: 121 LV--VGSSTSSSSLPYYAN----GGSDPIDDFQLQDQLSFLNDGSPTSTAFAHKTNPDLF 174
Query: 177 YPSQMDLSSSPPNGATDSMLFPSY-WGGGSSVHRRSCSVSD-VLGSSSDDLNSGLGWRPC 234
YP+ SS P A D LFPSY WGG S+HRRSCSV+D LG S+D +SGLGW+PC
Sbjct: 175 YPTNNSDLSSSPTTAVDPTLFPSYGWGG--SIHRRSCSVNDACLG--SEDPSSGLGWKPC 230
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
LYFARGYCKNG+SCRF+HGG + AA +VGSP K+E ++ CHELLRSKS
Sbjct: 231 LYFARGYCKNGTSCRFLHGGIGDADGGG----AAAMVGSPGKIEMMEQCHELLRSKS--- 283
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
VQQQRLAAASQLM SS+FPYSPKSMN LQQQQNDTQR AAAAALM++ED+HKFGRSR
Sbjct: 284 --VQQQRLAAASQLMASSTFPYSPKSMNFLLQQQQNDTQR-AAAAALMMSEDLHKFGRSR 340
Query: 355 LERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 414
LERNDFS+N S +VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF
Sbjct: 341 LERNDFSLN-SPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMF 399
Query: 415 GFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGT 474
GFVTFVYPETVK+IL+KGNPHFVCDARVLVKPYKEKGKVPDK KQQQQV+RG+FSPCGT
Sbjct: 400 GFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK--KQQQQVDRGDFSPCGT 457
Query: 475 PTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH 534
PTGLD+RD FDLQLG RM Y NTQDMLWRRK+EEQADLQQALELQSRRLMGLQLLD+KK
Sbjct: 458 PTGLDARDQFDLQLGGRMLY-NTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKK- 515
Query: 535 HHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
HH RALSTGSPIPSPTHSPN+F+QN+V P H +S P
Sbjct: 516 HHQRALSTGSPIPSPTHSPNMFNQNIV-PSFHINSESP 552
>gi|356542895|ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 698
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/581 (74%), Positives = 485/581 (83%), Gaps = 42/581 (7%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIVFSRIQNLD ENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARK+
Sbjct: 1 MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLL---GSNNLPPLTIPS-GTSWSTAVTDLP 116
L SNSP +PSTP SPSPF++RQNS++S L G N PPLTIP+ SW T +++L
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGINLPPPLTIPNPSASWPT-MSELQ 119
Query: 117 NPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNE-SSQNLGNKNQ-D 174
DL+ ++T++ S+LPFY NG SD IDE+QLQDQLSFLN+ S+ ++ +KN D
Sbjct: 120 T--DLVAGSSTSL--SSLPFYANG----GSDPIDEFQLQDQLSFLNDGSNTSISHKNNPD 171
Query: 175 LFYPSQMDLSSSPPNGATDSMLFPSY-WGGGSSVHRRSCSVSD-VLGSSSDDLNSGLGWR 232
LFYP+ D SSSP A D LFPSY WGG S+HRRSCSV+D LG+ +D NSGLGW+
Sbjct: 172 LFYPTYSDFSSSPTTAA-DPTLFPSYGWGG--SLHRRSCSVNDACLGT--EDPNSGLGWK 226
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSA 292
PCLYFARGYCKNG+SCRF+HGG +G D A +VGSPSK+E ++ CHELLRSKSA
Sbjct: 227 PCLYFARGYCKNGTSCRFLHGG-------LG-DADAAMVGSPSKIEMMEQCHELLRSKSA 278
Query: 293 AAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGR 352
QQQRLAAASQLM SS+FPYSPK MN LQQQQNDTQRAAAAA LM++ED+HKFGR
Sbjct: 279 -----QQQRLAAASQLMSSSTFPYSPKCMNFLLQQQQNDTQRAAAAA-LMMSEDLHKFGR 332
Query: 353 SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKR 412
SRLERNDFS+N S G+VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKR
Sbjct: 333 SRLERNDFSLN-SPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKR 391
Query: 413 MFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPC 472
MFGFVTFVYPETVK+IL+KGNPHFVCDARVLVKPYKEKGKVPDK + QQQQV+RG+FSPC
Sbjct: 392 MFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDK-KLQQQQVDRGDFSPC 450
Query: 473 GTPTGLDSRD-PFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDV 531
GTPTGLD+RD FDLQLG+RMFY NTQDMLWRRK+EEQADLQQALELQSRRLMGLQLLD+
Sbjct: 451 GTPTGLDARDHQFDLQLGSRMFY-NTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDI 509
Query: 532 KKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
KK HH RAL TGSPIPSPTHSPN+F+QNLV P H +S P
Sbjct: 510 KK-HHQRALCTGSPIPSPTHSPNMFNQNLV-PSFHITSEAP 548
>gi|224072821|ref|XP_002303898.1| predicted protein [Populus trichocarpa]
gi|222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/560 (73%), Positives = 457/560 (81%), Gaps = 43/560 (7%)
Query: 26 MGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRAS------NSPNSPSTPSSPSP 79
MGLLL+QDHGEKEMIRLAFGPEALVHSVILKARKEL +S + + SS
Sbjct: 1 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGLSSPTNLSTSPSSPSPLYSSNPI 60
Query: 80 FLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVT-DLPNPDDL-IPQTTTTMNSSALPFY 137
++RQNSSS+ LG N P L IP+ +S +++ DLPNPDDL I +++N +++PFY
Sbjct: 61 AISRQNSSSTSRLGFNIPPSLAIPNPSSNNSSSWSDLPNPDDLMISPNDSSLNPASVPFY 120
Query: 138 GNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLF 197
NG G SD++DE+QLQDQLSFLN++SQNLG K+ DLFYP Q+D SSP GA+DSM+F
Sbjct: 121 ANGVRGGESDLMDEFQLQDQLSFLNDNSQNLGPKSSDLFYP-QLDALSSP-TGASDSMMF 178
Query: 198 PSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETG 257
PSYWGG SVHRRSCSVSDVLGS +D NSG GWRPCLYFARGYCKNGS+CRFVHGG
Sbjct: 179 PSYWGG--SVHRRSCSVSDVLGS--EDPNSGFGWRPCLYFARGYCKNGSNCRFVHGG--- 231
Query: 258 SGNLMGSDGAATLVGSPS---KMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSS-- 312
+G A +VGSP+ K++ +D CHELLRSKSA QQRLAAASQLM SS
Sbjct: 232 ----LGELDGAGVVGSPNSNNKIDMMDQCHELLRSKSA-----HQQRLAAASQLMSSSAA 282
Query: 313 SFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA 372
SFPYSPKSMN LQQQQND+QRAAA A LM+ EDMHKFGRSRL+RND +VNPA
Sbjct: 283 SFPYSPKSMNFLLQQQQNDSQRAAATA-LMMGEDMHKFGRSRLDRND--------LVNPA 333
Query: 373 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 432
SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG
Sbjct: 334 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 393
Query: 433 NPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARM 492
NPHFVCDARVLVKPYKEKGKVPDK ++QQQQVERGEFSPCGTPTGLDSRDPFDLQLGARM
Sbjct: 394 NPHFVCDARVLVKPYKEKGKVPDK-KQQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARM 452
Query: 493 FYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHS 552
FY NTQDMLWRRK+EEQADLQQALELQSRRLM LQLLDVKK HHHRALS GSP+PSPTHS
Sbjct: 453 FY-NTQDMLWRRKLEEQADLQQALELQSRRLMSLQLLDVKK-HHHRALSNGSPVPSPTHS 510
Query: 553 PNIFHQNLVFPPLHSSSAEP 572
PNIF+ +L FPPLHSS+ P
Sbjct: 511 PNIFNHSLAFPPLHSSTEVP 530
>gi|38230504|gb|AAR14273.1| predicted protein [Populus tremula x Populus alba]
Length = 705
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/586 (70%), Positives = 462/586 (78%), Gaps = 45/586 (7%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD Y ATRIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDAYGATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRAS------NSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVT- 113
L +S + + SS ++RQN+SS+ LG N P L IP+ +S +++
Sbjct: 61 LGLSSPTNLSTSPSSPSPLYSSNPVAISRQNNSSTSRLGFNIPPSLAIPNPSSNNSSSWS 120
Query: 114 DLPNPDDL-IPQTTTTMNSSALPFYGNGT-GSGSSDVIDEYQLQDQLSFLNESSQNLGNK 171
DLPNPDDL I +++N +++P Y NG G G SD++DE+ LQDQLSFL ++ +K
Sbjct: 121 DLPNPDDLMISPNDSSLNPASVPSYANGVRGGGESDLMDEFHLQDQLSFLMIIHKSR-SK 179
Query: 172 NQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGW 231
+ DLFYP Q+D SSP GA+DSM+FPSYWGG SVHRRSCSVSDVLGS +D NSG GW
Sbjct: 180 SSDLFYP-QLDALSSP-TGASDSMMFPSYWGG--SVHRRSCSVSDVLGS--EDPNSGFGW 233
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPS---KMEPIDHCHELLR 288
RPCLYFARGYCKNGS+CRFVHGG +G A +VGSP+ K++ +D CHELLR
Sbjct: 234 RPCLYFARGYCKNGSNCRFVHGG-------LGELDGAGVVGSPNSNNKIDMMDQCHELLR 286
Query: 289 SKSAAAAQVQQQRLAAASQLMGSS--SFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNED 346
SKSA QQRLAAASQLM S SFPYSPKSMN LQQQQND+QRAAA A LM+ ED
Sbjct: 287 SKSA-----HQQRLAAASQLMSGSAASFPYSPKSMNFLLQQQQNDSQRAAATA-LMMGED 340
Query: 347 MHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 406
MHKFGRSRL+RND +VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI
Sbjct: 341 MHKFGRSRLDRND--------LVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 392
Query: 407 PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVER 466
PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK ++QQQQVER
Sbjct: 393 PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-KQQQQQVER 451
Query: 467 GEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGL 526
GEFSPCGTPTGLDSRDPFDLQLGA MFY NTQDMLWRRK+E QADLQQALELQSRRLM L
Sbjct: 452 GEFSPCGTPTGLDSRDPFDLQLGAGMFY-NTQDMLWRRKLEGQADLQQALELQSRRLMSL 510
Query: 527 QLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
QLLDVKK HHHRALS GSP P F+ +L FPPLHSS+ P
Sbjct: 511 QLLDVKK-HHHRALSNGSPCPLTYSLSQYFNHSLAFPPLHSSTEAP 555
>gi|224114163|ref|XP_002332416.1| predicted protein [Populus trichocarpa]
gi|222832369|gb|EEE70846.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/531 (73%), Positives = 433/531 (81%), Gaps = 43/531 (8%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 L------VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP-LTIPSGTSWSTAVT 113
L + + SS ++RQNSSSS N+PP LTIP+ +S ++
Sbjct: 61 LGLCSPTNPSKSPSPPSPLYSSNPITISRQNSSSSTSRLGFNIPPSLTIPNPSSNFSSSW 120
Query: 114 -DLPNPDDLIPQTTTTMNSSALPFYGNGT-GSGSSDVIDEYQLQDQLSFLNESSQNLGNK 171
DLPNPDDLI +++N ++ PFY NG G G SD++DE+QLQDQLSFLN++S NLG K
Sbjct: 121 SDLPNPDDLISPNGSSLNPASAPFYANGVRGGGESDLMDEFQLQDQLSFLNDNSANLGPK 180
Query: 172 NQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGW 231
+ DLFY SQ+D SSP GA+DS++FPSYWGG SVHRRSCSVSDVLGS +D NSG GW
Sbjct: 181 SSDLFY-SQLDALSSP-TGASDSVMFPSYWGG--SVHRRSCSVSDVLGS--EDPNSGFGW 234
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPS---KMEPIDHCHELLR 288
RPCLYFARGYCKNGS+CRFVHGG L SDGA +VGSP+ K++ +D CHELLR
Sbjct: 235 RPCLYFARGYCKNGSNCRFVHGG------LGESDGAGVVVGSPNGNNKIDMMDQCHELLR 288
Query: 289 SKSAAAAQVQQQRLAAASQLMGSS--SFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNED 346
SKSA QQQRLAAASQLMG S SFPYSPKSMN LQQQQND+QRAAAA LM+ ED
Sbjct: 289 SKSA-----QQQRLAAASQLMGGSAASFPYSPKSMNFLLQQQQNDSQRAAAA--LMMGED 341
Query: 347 MHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 406
MHKF RSRL+RND ++NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI
Sbjct: 342 MHKFARSRLDRND--------LINPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 393
Query: 407 PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVER 466
PYQQKRMFGFVTF+YPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK ++QQQQVER
Sbjct: 394 PYQQKRMFGFVTFLYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-KQQQQQVER 452
Query: 467 GEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALE 517
GEFSPCGTPTGLDSRDPFDLQLGARMFY NTQDMLWRRK+EEQADLQQALE
Sbjct: 453 GEFSPCGTPTGLDSRDPFDLQLGARMFY-NTQDMLWRRKLEEQADLQQALE 502
>gi|449451727|ref|XP_004143613.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Cucumis sativus]
Length = 733
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/600 (67%), Positives = 469/600 (78%), Gaps = 51/600 (8%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEA+RIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEAL+HSVILKA+K+
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 L-VRASNSPNSPSTPS--------SPSPFLARQNSSSSRLLGSNNLPPLTIPSGTS---- 107
L + A NSP++PSTPS S +P + SSSS LG + LTIPS +S
Sbjct: 61 LSLPAVNSPSTPSTPSSSPSPFALSTNPISISRQSSSSSRLGISLPLSLTIPSPSSSSSV 120
Query: 108 -WSTAVT-DLPNPDD-LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNES 164
W+ + DL DD LI + SS G+ +SD+IDE+QLQDQLSFLN+
Sbjct: 121 SWAAGFSSDLQTSDDHLISPGNLPLGSSCFA----AGGAPASDMIDEFQLQDQLSFLNDG 176
Query: 165 SQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSD-VLGSSSD 223
S +G KN DLF+P DLSSSP G S + WGGG VHRRSCSV+D LG+ +
Sbjct: 177 SPTIGVKNADLFFPP-ADLSSSPTGGGFGSYGGDATWGGGP-VHRRSCSVNDACLGT--E 232
Query: 224 DLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHC 283
DLN GLGW+PCLYFARG+CKNG+SCRF+HGG L SD +A VGSPSK++ ++ C
Sbjct: 233 DLNCGLGWKPCLYFARGFCKNGTSCRFLHGG------LGDSDVSAAAVGSPSKIDVMEQC 286
Query: 284 HELLRSKSAAAAQVQQQRLAAASQLMGSS-SFPYSPKSMNLFLQQQQNDTQRAAAAAA-- 340
HELLRSKS+A QQRLAAASQLM S+ SFPYSPKS+N LQQQQND+QRAAAAAA
Sbjct: 287 HELLRSKSSA-----QQRLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAAAAAA 341
Query: 341 ---LMLNEDMHKFGRS-RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFS 396
LM+ ED+HKF RS RLERN+FS+NGSAGI+NPASRQIYLTFPADSTF+EEDVSNYFS
Sbjct: 342 AAALMMGEDLHKFSRSSRLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFS 401
Query: 397 IYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
+YGPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCDARVLVKPYKEKGKVPDK
Sbjct: 402 MYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK 461
Query: 457 YRKQQQQVERGEFSPCGTPTGLDSRDPFD-LQLGARMFYNNTQDMLWRRKMEEQADLQQA 515
YRK QQQ++R +FSPCGTPTGLDSR+ +D LQLG+RMFYN+ QD+LWRRK+EEQ Q
Sbjct: 462 YRK-QQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQT 519
Query: 516 LELQSRRLMGLQLLDVKK----HHHHRALSTGSPIPSPTHSPN-IFHQNLVFPPLHSSSA 570
L+LQSRRL+ LQLLDVKK HHHHRALSTGSPIPSPTHSPN +F QNL+FP + SS +
Sbjct: 520 LDLQSRRLLNLQLLDVKKNQLPHHHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRSSGS 579
>gi|147770113|emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/612 (64%), Positives = 441/612 (72%), Gaps = 94/612 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLA-------RQ---NSSSSRLLGSN--NLP-PLTIPSGTS 107
L +SN+P++PSTPSSPSPFL+ RQ +S+SSRLLG+ NLP PL IP+ +S
Sbjct: 61 LGISSNTPSTPSTPSSPSPFLSNNPLSQSRQTSFSSTSSRLLGAGGLNLPSPLAIPNPSS 120
Query: 108 WSTAVT---------DLPNPDD-LIPQTTTT-MNSSAL------------PFYGNGTGSG 144
+++ + DL +P+ IP T + +N A+ PFYG
Sbjct: 121 SASSFSVFSDFQPQDDLISPNSGAIPYTNSNGINGVAVGSSSSAMNSSSSPFYGG----- 175
Query: 145 SSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY-WGG 203
+D+IDE+QLQDQLSFLN+ S LG KN DLFY Q SS D+M FPSY WG
Sbjct: 176 -NDLIDEFQLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSPGGGSGGDAMGFPSYGWGA 234
Query: 204 GSS--VHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNL 261
++ HRRSCSV L SG G R HGG
Sbjct: 235 AANGLPHRRSCSVPS---RRRLRLRSGFGGR------------------SHGG------- 266
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSM 321
PSK+E ++ CHELLRSKSA QQQRLAAASQ+M S+SFPYS K M
Sbjct: 267 -----------XPSKIEMMEQCHELLRSKSA-----QQQRLAAASQIMASASFPYSAKCM 310
Query: 322 NLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFP 381
N LQQQQ D+QRAAAA LM+ +DMHKFGRSRLER +F +NG AG+VNP SRQIYLTFP
Sbjct: 311 NFLLQQQQTDSQRAAAA--LMMGDDMHKFGRSRLERGEF-MNGGAGMVNPGSRQIYLTFP 367
Query: 382 ADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
ADSTFREEDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCDAR
Sbjct: 368 ADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDAR 427
Query: 442 VLVKPYKEKGKVPD-KYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDM 500
VLVKPYKEKGKVPD K ++QQQQVERGEFS C TPTGLDSRDP+DLQLGARMFY NTQDM
Sbjct: 428 VLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMFY-NTQDM 486
Query: 501 LWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNL 560
LWRRK+EEQADLQQA+ELQ RRLMGLQLLDVKK HHRALSTG+PIPSPTHSP+ F+Q L
Sbjct: 487 LWRRKLEEQADLQQAIELQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQPL 546
Query: 561 VFPPLHSSSAEP 572
+ P SS P
Sbjct: 547 ILPSDRSSPEAP 558
>gi|357471117|ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355506898|gb|AES88040.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 666
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 358/593 (60%), Positives = 417/593 (70%), Gaps = 89/593 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEAT++VFSRI+++DPENAS IMGLLL ++HGEKEMIRLA PE+L+HSVI KARKE
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 61 L----VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSN-NLPP-LTIPSGTSWSTAVTD 114
L S S ++PS FL+RQNSS+S L S NLPP LTIP+ SW
Sbjct: 61 LGLPCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLPPSLTIPN-PSWGA---- 115
Query: 115 LPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQD 174
TTTTM+ S SD ID++QLQDQLSFLN+ S
Sbjct: 116 ----------TTTTMSMS-----DQFQNHDDSDPIDDFQLQDQLSFLNDGSD-------- 152
Query: 175 LFYPSQMDLSSSPPNGATDSMLFPSY-WGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRP 233
PSY WGG SS+HRRSCSV+D + S+D ++GLGW+P
Sbjct: 153 -----------------------PSYGWGGNSSLHRRSCSVNDAYLAGSEDPSAGLGWKP 189
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPI--DHCHELLRSKS 291
CLYFARGYCKNG+SCRF+HG + + AA +VGSP+K+E + + HELLRSKS
Sbjct: 190 CLYFARGYCKNGTSCRFLHGDASAA--------AAAIVGSPNKIENMMDQYHHELLRSKS 241
Query: 292 AAAAQVQQQRLAAA---SQLMGSSSFPYSPKSMNLFLQQQQN--DTQRAAAAAALMLNED 346
+ QQR AAA SQLM S+SF SPK MN LQQQQN DTQRAAAAA LM+NE+
Sbjct: 242 S-----HQQRFAAAAAASQLMASNSFLCSPKGMNFLLQQQQNQNDTQRAAAAA-LMMNEE 295
Query: 347 MHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 406
+HKFGRSRLERNDFS+ G++NPASRQIYLTFPADSTFREEDVS YFS +GPVQDVRI
Sbjct: 296 LHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRI 355
Query: 407 PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVER 466
PYQQKRMFGFVTFV+PETVK IL+KGNPHFVC+ARVLVKPYKEKGK+PDK + QQQ
Sbjct: 356 PYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLVKPYKEKGKIPDKKQLQQQ---- 411
Query: 467 GEFSPCGTPTGL-DSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADL-QQALELQSRRLM 524
G+FSPC TPTGL D+RD +DLQL RMFY NT+DMLWRRK EQA+L QQALE+Q RRLM
Sbjct: 412 GDFSPCRTPTGLVDARDQYDLQLAERMFY-NTEDMLWRRK--EQAELQQQALEIQRRRLM 468
Query: 525 GLQLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEPPPGNN 577
GLQLLD+ K+ H RALSTGS + SPT SPN+F QNLV P SS G+N
Sbjct: 469 GLQLLDI-KNQHQRALSTGSLVHSPTQSPNMFDQNLVLPFRRSSEFSDVIGSN 520
>gi|296085121|emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/381 (75%), Positives = 324/381 (85%), Gaps = 14/381 (3%)
Query: 193 DSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVH 252
D ++ P+ HRRSCSVSD+ +SDD SG GW+PCLYFARGYCKNG+SCRF+H
Sbjct: 113 DDLISPNSAAANGLPHRRSCSVSDIC-LASDDPASGFGWKPCLYFARGYCKNGTSCRFLH 171
Query: 253 GGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSS 312
GG++ S ++GS+GAA +VGSPSK+E ++ CHELLRSKSA QQQRLAAASQ+M S+
Sbjct: 172 GGDSAS--VVGSEGAA-MVGSPSKIEMMEQCHELLRSKSA-----QQQRLAAASQIMASA 223
Query: 313 SFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA 372
SFPYS K MN LQQQQ D+QRAAAA LM+ +DMHKFGRSRLER +F +NG AG+VNP
Sbjct: 224 SFPYSAKCMNFLLQQQQTDSQRAAAA--LMMGDDMHKFGRSRLERGEF-MNGGAGMVNPG 280
Query: 373 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 432
SRQIYLTFPADSTFREEDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKG
Sbjct: 281 SRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKG 340
Query: 433 NPHFVCDARVLVKPYKEKGKVPD-KYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGAR 491
NPHFVCDARVLVKPYKEKGKVPD K ++QQQQVERGEFS C TPTGLDSRDP+DLQLGAR
Sbjct: 341 NPHFVCDARVLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGAR 400
Query: 492 MFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTH 551
MFY NTQDMLWRRK+EEQADLQQA+ELQ RRLMGLQLLDVKK HHRALSTG+PIPSPTH
Sbjct: 401 MFY-NTQDMLWRRKLEEQADLQQAIELQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTH 459
Query: 552 SPNIFHQNLVFPPLHSSSAEP 572
SP+ F+Q L+ P SS P
Sbjct: 460 SPSFFNQPLILPSDRSSPEAP 480
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 82/90 (91%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEALVHSVILKARKE
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSR 90
L +SN+P++PSTPSSPSPFL+ S SR
Sbjct: 61 LGISSNTPSTPSTPSSPSPFLSNNPLSQSR 90
>gi|224104191|ref|XP_002313352.1| predicted protein [Populus trichocarpa]
gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 328/588 (55%), Positives = 410/588 (69%), Gaps = 69/588 (11%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT IVFSRIQ+L+PENASKIMG LLLQD+GEKEMIRLAFGPE L+ ++IL+ + +
Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60
Query: 61 LVRASNSPNSPS---TPSS-PSPFLARQNSSSSRLLGSNNL------------PPLTIPS 104
L SN+P++PS PSS PSP SSSR+ +N PL P+
Sbjct: 61 LGFPSNTPSTPSPAFIPSSRPSPLYI----SSSRIPNNNGFDITNSSSPSTNSWPLLSPN 116
Query: 105 GT---SWSTAVTDLPNPD-DLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSF 160
T S+++ V N + P T S A + N ++D++DEY+LQ++ SF
Sbjct: 117 STTSLSYASVVNGASNINAGSTPFQPTVSLSKAFSYSNNN--DNANDLVDEYELQERFSF 174
Query: 161 LNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGS 220
LN+S K DLF P + +L+ SPP G +S+H+RS SV +
Sbjct: 175 LNDS------KTDDLFDP-RGELAMSPP------------AFGDNSLHKRSFSVPGMC-F 214
Query: 221 SSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPI 280
S+D NSG GW+PCLYF+RG+CKNG+ CRFVHG S A +VGSPS++
Sbjct: 215 GSEDSNSGFGWKPCLYFSRGFCKNGTGCRFVHGDSADS---------AAIVGSPSELNEF 265
Query: 281 DHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAA 340
+ C E+LRSK+AA QQ++LAAASQ M ++F K MN FL QQQN++QR+AAAAA
Sbjct: 266 EQCQEILRSKAAA----QQRKLAAASQFMAGATFLPQNKCMN-FLHQQQNESQRSAAAAA 320
Query: 341 LMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGP 400
LM+ +++HKFGR R ER+DFS G G ++P++RQIYLTFPADSTFREEDVS+YFS YGP
Sbjct: 321 LMMGDEIHKFGRIRPERSDFSQMGLGGAMSPSARQIYLTFPADSTFREEDVSSYFSFYGP 380
Query: 401 VQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ 460
VQDVRIPYQQKRMFGFVTFV+ ETVK+ILAKGNPHFVCD+RVLVKPYKEKGKVPDK +Q
Sbjct: 381 VQDVRIPYQQKRMFGFVTFVFAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHQQ 440
Query: 461 QQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQS 520
QQQ+ER E+S C +P+ ++ R+PFDL LG RMFY NTQ+ML RRK+EE+ADLQQA+ELQ
Sbjct: 441 QQQIEREEYSACPSPSRINCREPFDLHLGGRMFY-NTQEML-RRKLEEEADLQQAIELQE 498
Query: 521 RRLMGLQLLDVKKHHHHR---ALSTGSPIPSPT--HSPNIFHQNLVFP 563
RRL+ LQLLD+K H HR LSTGSP+PSPT HSPN +Q L FP
Sbjct: 499 RRLLNLQLLDLKNHRQHRYFHGLSTGSPLPSPTILHSPN--NQTLFFP 544
>gi|225436555|ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Vitis vinifera]
Length = 695
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 415/597 (69%), Gaps = 78/597 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
MD YEATRIVFSRIQ LDPENASKIMG +LL+QDHGEKEMIRLAFGPE L+H++ILKA+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 ELVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP-----------LTIPSGT-- 106
+L SN+P++P++PS +P S +RL +N P L P+ T
Sbjct: 61 QLGILSNTPSTPTSPSPFNPI-----SKPTRLPTNNGFNPSSSWPVSGFSDLRSPNSTTA 115
Query: 107 --SWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSS------DVIDEYQLQDQL 158
S++ V N DL T + + +++P+Y N + S +S +V+D+YQLQD L
Sbjct: 116 QLSYAAVVNGATNVSDL---GTVSSSPASIPYYNNCSSSNNSSVVCNDNVMDDYQLQDHL 172
Query: 159 SFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVL 218
SFLN++S K +DLF P +++L+ SP G T +HRRS S +D
Sbjct: 173 SFLNDAS-----KPEDLFDP-RLELAMSPSFGETQ-------------LHRRSYSFNDAC 213
Query: 219 GSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKME 278
SDD SG GW+PCLYFARG+CKNG++C+F+HGG S + +A +VGSP K++
Sbjct: 214 -YGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAA-SAAIVGSPGKLD 271
Query: 279 PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAA 338
+ E+LRS QQQRLA ASQLM +FPY+ K MN F+QQ N+TQR+AAA
Sbjct: 272 GFEQ--EMLRS--------QQQRLAVASQLMAGLNFPYN-KCMNFFMQQ--NETQRSAAA 318
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A LM+ E++HKFGR R ERNDFS G G VNP SRQIYLTFPADSTFREEDVSNYFSI+
Sbjct: 319 A-LMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIF 377
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-- 456
GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCD+RVLVKPYKEKGKVP+K
Sbjct: 378 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQ 437
Query: 457 -----YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQAD 511
++QQQQ+ERGE+S C +P+G+D R+P+DL LGARMFY NTQ+ML RRK+EEQAD
Sbjct: 438 QHQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFY-NTQEMLLRRKLEEQAD 496
Query: 512 LQQALELQSRRLMGLQLLDVK-----KHHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
LQQA+ELQ RRLM LQLLD+K HH LS G+P+ SP+ S +Q+L P
Sbjct: 497 LQQAIELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLP 553
>gi|147807899|emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
Length = 697
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 334/599 (55%), Positives = 414/599 (69%), Gaps = 80/599 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
MD YEATRIVFSRIQ LDPENASKIMG +LL+QDHGEKEMIRLAFGPE L+H++ILKA+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 ELVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP-----------LTIPSGT-- 106
+L SN+P++P++PS +P S +RL +N P L P+ T
Sbjct: 61 QLGILSNTPSTPTSPSPFNPI-----SKPTRLPTNNGFNPSSSWPVSGFSDLRSPNSTTA 115
Query: 107 --SWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSG------SSDVIDEYQLQDQL 158
S++ V N DL T + + +++P+Y N +GS + +V+D+YQLQD L
Sbjct: 116 QLSYAAVVNGATNVSDL---GTVSSSPASIPYYNNCSGSNNSSVVCNDNVMDDYQLQDHL 172
Query: 159 SFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVL 218
SFLN++S K +DLF P +++L+ SP G T +HRRS S +D
Sbjct: 173 SFLNDAS-----KPEDLFDP-RLELAMSPSFGETQ-------------LHRRSYSFNDAC 213
Query: 219 GSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKME 278
SDD SG GW+PCLYFARG+CKNG++C+F+HGG S + +A +VGSP K++
Sbjct: 214 -YGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAA-SAAIVGSPGKLD 271
Query: 279 PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAA 338
+ E+LRS QQQRLA ASQLM +FPY+ K MN F+QQ N+TQR+AAA
Sbjct: 272 GFEQ--EMLRS--------QQQRLAVASQLMAGLNFPYN-KCMNFFMQQ--NETQRSAAA 318
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A LM+ E++HKFGR R ERNDFS G G VNP SRQIYLTFPADSTFREEDVSNYFSI+
Sbjct: 319 A-LMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIF 377
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-- 456
GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCD+RVLVKPYKEKGKVP+K
Sbjct: 378 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQ 437
Query: 457 -------YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQ 509
++QQQQ+ERGE+S C +P+G+D R+P+DL LGARMFY NTQ+ML RRK+EEQ
Sbjct: 438 QHQQQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFY-NTQEMLLRRKLEEQ 496
Query: 510 ADLQQALELQSRRLMGLQLLDVK-----KHHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
ADLQQA+ELQ RRLM LQLLD+K HH LS G+P+ SP S +Q+L P
Sbjct: 497 ADLQQAIELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPXQSSIHNNQSLGLP 555
>gi|255544928|ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 700
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/438 (65%), Positives = 334/438 (76%), Gaps = 40/438 (9%)
Query: 133 ALPFYGNGTGSGSS--DVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNG 190
A P+Y + + + ++ D+IDEYQLQD SFLN+S K +LF P ++DL+ SP
Sbjct: 158 AFPYYNSNSTNNNTSNDLIDEYQLQDHFSFLNDS------KTDELFDP-RLDLAMSPT-- 208
Query: 191 ATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRF 250
+Y G + +HRRS SV L S+D NSGLGW+PCLYFARG+CKNG+SCRF
Sbjct: 209 --------AY--GDTHLHRRSFSVPG-LCFGSEDANSGLGWKPCLYFARGFCKNGTSCRF 257
Query: 251 VHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMG 310
+HGGE+G G ATLVGSPSK+ + C ELLRSK+AAA Q + AAASQ M
Sbjct: 258 LHGGESGDG--------ATLVGSPSKLSEFEQCQELLRSKAAAAQQQKL---AAASQFMT 306
Query: 311 SSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVN 370
+SFPY+ K MNL LQQQ NDTQR+AAAAALM+ E++HKFGR R ERNDFS G G +N
Sbjct: 307 GASFPYN-KCMNLLLQQQ-NDTQRSAAAAALMMGEELHKFGRCRPERNDFSAMGLGGAMN 364
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILA 430
P SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVK+ILA
Sbjct: 365 PGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 424
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYR-KQQQQVERGEFSPCGTPTGLDSRDPFDLQLG 489
KGNPHFVCD+RVLVKPYKEKGKVPDK + QQQQ+ERG++S C +P+GLDSR+PFDL LG
Sbjct: 425 KGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQMERGDYSACSSPSGLDSREPFDLHLG 484
Query: 490 ARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHR---ALSTGSPI 546
ARMF NTQ+ML RRK+EEQA+LQQA+ELQ RRLM LQLLD K H+HH+ LSTGSP+
Sbjct: 485 ARMF-QNTQEMLLRRKLEEQAELQQAIELQGRRLMNLQLLDFKNHNHHQFLHGLSTGSPV 543
Query: 547 PSPTHSPNIFHQNLVFPP 564
PSPT S Q L+F P
Sbjct: 544 PSPTPSRTPNSQTLIFQP 561
>gi|449476117|ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 46-like [Cucumis sativus]
Length = 675
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 310/590 (52%), Positives = 387/590 (65%), Gaps = 59/590 (10%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT +V+++I+NL+PENASKIMG LL+QD G+KE+IRLAFGPE L+HS+ILKA+
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 L--------------------VRASNS-PNSPSTPSSPSP-FLARQNSSSSRLLGSNNLP 98
L R SNS P S S+P P+ F +N SS GS +L
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 99 PLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQL 158
+T + S+ + D I +M PF + G S+VI+E Q+ + L
Sbjct: 121 GITNNVISPKSSPLLSY----DSIRAAPFSMP----PFMQHKNGFVDSEVIEEPQVNEYL 172
Query: 159 SFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVL 218
SFLNESS + G +DL P +M+L N T SM + HRRS S SDV
Sbjct: 173 SFLNESSSSRG---EDLVDP-RMELGRGLQNW-TQSM-----DNADTPFHRRSYSASDVC 222
Query: 219 GSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKME 278
S+D G+G++PCLYFARG+CKNGS+C+F+HG + S D +A +VGSPSK+E
Sbjct: 223 -FGSEDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDS-----VDPSAAIVGSPSKLE 276
Query: 279 PI-DHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAA 337
+ D E +R K+A QQQRLA AS+LM S K +N FL QQQN+ RA A
Sbjct: 277 GLFDQREEFMRYKAA-----QQQRLATASELMAGVSPSQYNKYIN-FLLQQQNENHRATA 330
Query: 338 AAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSI 397
AA LM+ ++ HKFG SR ERNDF + +A N ASRQIYLTFPADSTF++EDVS YFS
Sbjct: 331 AA-LMMGDEYHKFGMSRSERNDF-LALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSK 388
Query: 398 YGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK- 456
+GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHF+C++RVLVKPYKEKGKVP+K
Sbjct: 389 FGPVQDVRIPYQQKRMFGFVTFVYPETVKXILAKGNPHFICESRVLVKPYKEKGKVPEKR 448
Query: 457 YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQAL 516
+ QQQQ++RG+FSPC +P+GLD+RDP+DL LGARM YNNTQ M+ RRK+EEQ +LQQAL
Sbjct: 449 QQHQQQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQAL 508
Query: 517 ELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP--THSPNIFHQNLVFPP 564
ELQ RRL+ LQL D+K H PI +P S N +QN +FPP
Sbjct: 509 ELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQN-IFPP 557
>gi|449442555|ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 675
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 310/590 (52%), Positives = 387/590 (65%), Gaps = 59/590 (10%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT +V+++I+NL+PENASKIMG LL+QD G+KE+IRLAFGPE L+HS+ILKA+
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 L--------------------VRASNS-PNSPSTPSSPSP-FLARQNSSSSRLLGSNNLP 98
L R SNS P S S+P P+ F +N SS GS +L
Sbjct: 61 LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120
Query: 99 PLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQL 158
+T + S+ + D I +M PF + G S+VI+E Q+ + L
Sbjct: 121 GITNNVISPKSSPLLSY----DSIRAAPFSMP----PFMQHKNGFVDSEVIEEPQVNEYL 172
Query: 159 SFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVL 218
SFLNESS + G +DL P +M+L N T SM + HRRS S SDV
Sbjct: 173 SFLNESSSSRG---EDLVDP-RMELGRGLQNW-TQSM-----DNADTPFHRRSYSASDVC 222
Query: 219 GSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKME 278
S+D G+G++PCLYFARG+CKNGS+C+F+HG + S D +A +VGSPSK+E
Sbjct: 223 -FGSEDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDS-----VDPSAAIVGSPSKLE 276
Query: 279 PI-DHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAA 337
+ D E +R K+A QQQRLA AS+LM S K +N FL QQQN+ RA A
Sbjct: 277 GLFDQREEFMRYKAA-----QQQRLATASELMAGVSPSQYNKYIN-FLLQQQNENHRATA 330
Query: 338 AAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSI 397
AA LM+ ++ HKFG SR ERNDF + +A N ASRQIYLTFPADSTF++EDVS YFS
Sbjct: 331 AA-LMMGDEYHKFGMSRSERNDF-LALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSK 388
Query: 398 YGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK- 456
+GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHF+C++RVLVKPYKEKGKVP+K
Sbjct: 389 FGPVQDVRIPYQQKRMFGFVTFVYPETVKNILAKGNPHFICESRVLVKPYKEKGKVPEKR 448
Query: 457 YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQAL 516
+ QQQQ++RG+FSPC +P+GLD+RDP+DL LGARM YNNTQ M+ RRK+EEQ +LQQAL
Sbjct: 449 QQHQQQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQAL 508
Query: 517 ELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP--THSPNIFHQNLVFPP 564
ELQ RRL+ LQL D+K H PI +P S N +QN +FPP
Sbjct: 509 ELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQN-IFPP 557
>gi|326526009|dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 305/570 (53%), Positives = 371/570 (65%), Gaps = 76/570 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VF+RIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPEAL+ +V+ KARK+
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGLLLIQDHGEKEMIRLAFGPEALLLAVMAKARKD 60
Query: 61 L--VRASNSPNSPSTPSSP--SPF-LARQN------SSSSRLLGSNNLPPLTIPSGTSWS 109
L + AS+ P +P++ ++ SPF L+RQN ++ L ++ P S S
Sbjct: 61 LGLLPASSGPGTPTSAAATGHSPFMLSRQNPGRGGGGTAPSPLSVSSPSSWAPPPVFSRS 120
Query: 110 TAVTDLPNPDDLIPQTTTTM---NSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQ 166
+V++ +++ M N PF+G G G S ++DE LQDQL+FL+E
Sbjct: 121 NSVSNGSAAEEMAGVGEELMSPANGPQSPFFGGG---GDSLILDELHLQDQLAFLSEGGM 177
Query: 167 NLGNKNQDLFYPSQMDLSSSPPNGATDSMLFP--SYWGGGSSVHRRSCSVSDVLGSSSDD 224
G + LF + SP G D LFP + W G HRRS SVS++ D
Sbjct: 178 GGGGRQLPLFDNGE---CRSPSGG--DGGLFPYGAGWANGGPGHRRSASVSELCFGGGD- 231
Query: 225 LNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDH-C 283
GLGW+PCLY+ARGYCKNGS+CRFVHGG L G+ ++ C
Sbjct: 232 ---GLGWKPCLYYARGYCKNGSACRFVHGGFPDD-----------LAGAKMDQAAVEQQC 277
Query: 284 HE-LLRSKSAAAAQVQQQRLAAASQLMGS--SSFPYSPKSMNLFLQQQQ-------NDTQ 333
+ LLRSKS QRLAAA+ S S P SP + + L ND Q
Sbjct: 278 QDFLLRSKS--------QRLAAAAGFAYSPTGSLPGSPSAASKCLSLLLQQQQQQQNDGQ 329
Query: 334 RAAAAAA---LMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFRE 388
RAAAAAA LML D HKF R RL+R DF A ++NP SRQIYLTFPADSTFRE
Sbjct: 330 RAAAAAAAAALMLGGDEAHKFMNRPRLDRGDF-----ASMMNPGSRQIYLTFPADSTFRE 384
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
EDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYK
Sbjct: 385 EDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYK 444
Query: 449 EKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWRRK 505
EKGKVPDK+RKQQ ER +FS CG+PTGLD+RDPFDL Q+GARM N+ +ML RRK
Sbjct: 445 EKGKVPDKFRKQQG--ERVDFSSCGSPTGLDARDPFDLHQIGARMLQHSNSANEMLLRRK 502
Query: 506 MEEQ---ADLQQALELQSRRLMGLQLLDVK 532
+EEQ +LQQA+ELQSRRLMGLQ+LD+K
Sbjct: 503 LEEQQQAVELQQAIELQSRRLMGLQMLDLK 532
>gi|115474123|ref|NP_001060660.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|122166929|sp|Q0D3J9.1|C3H53_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 53;
Short=OsC3H53
gi|113612196|dbj|BAF22574.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|215767061|dbj|BAG99289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767076|dbj|BAG99304.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 682
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 315/600 (52%), Positives = 375/600 (62%), Gaps = 113/600 (18%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 L-VRASNSPNSPSTPSSP-----SPF-LARQNSS------------------SSRLLGSN 95
L + ++ P +P++ ++ SPF L+RQNS + N
Sbjct: 61 LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120
Query: 96 NLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQ 155
N +I +G D+LI + PF+G ++DE QLQ
Sbjct: 121 N----SISNGAGEEMVGLG----DELI--SPANGGGPPSPFFGG------DPLMDELQLQ 164
Query: 156 DQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY---WGGGSSVHRRSC 212
DQL+FLNE G++ D G D LF SY W G HRRS
Sbjct: 165 DQLAFLNEGGVPAGHQM------PMFDGGECRSPGGGDGGLF-SYNLGWANGGPGHRRSA 217
Query: 213 SVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVG 272
SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG + D A +
Sbjct: 218 SVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGG-------LPDDAAGKM-- 264
Query: 273 SPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPK------------ 319
PS +E C + L+RSKS QRLAAA+ FPYSP
Sbjct: 265 DPSAVE--QQCQDFLIRSKS--------QRLAAAA-------FPYSPTGSLPGSPSAATK 307
Query: 320 --SMNLFLQQQQNDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQ 375
S+ L QQQQN++QRAAAAAALML D HKF GR RLER DF A ++NP SRQ
Sbjct: 308 CLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRPRLERADF-----ASMMNPGSRQ 362
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPH 435
IYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPH
Sbjct: 363 IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 422
Query: 436 FVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY 494
F+CDARVLVKPYKEKGKVPDKYRKQ Q ER +FS C TPTGLD+RDPFD+ QLGARM
Sbjct: 423 FICDARVLVKPYKEKGKVPDKYRKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQ 482
Query: 495 --NNTQDMLWRRK---MEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
N+ +ML RRK ++ A+LQQA+EL SRRLMGLQLLD K RA + +PI +P
Sbjct: 483 HSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQLLDFKS----RAAAAPTPIGNP 538
>gi|205688046|sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22
gi|108707943|gb|ABF95738.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 302/572 (52%), Positives = 370/572 (64%), Gaps = 87/572 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA---- 111
L S +SP+ P++ SPFL +RQNS + L + S +SW+ A
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPL---SASSPSSWAQAQPFS 117
Query: 112 -----VTDLPNP-DDLIPQTTTTMNSSA--LPFYGNGTGSGSSDVI-DEYQLQDQLSFLN 162
V ++ ++LI + ++A PF+ G DV+ D++QLQ+QL+FLN
Sbjct: 118 RSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRG-----GDVLLDDFQLQEQLAFLN 172
Query: 163 ESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV-LGSS 221
E N + Q + S P + W G HRRS SV+++ LG
Sbjct: 173 EGGVNPSHPLQGF---DGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGG 229
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID 281
S D G GW+PCLY+ARG+CKNGSSCRFVHG D AA L G+
Sbjct: 230 SSD---GFGWKPCLYYARGFCKNGSSCRFVHG-----------DDAAALTGAA------- 268
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQ 329
+ + +A Q Q L + SQ +G ++FPYSP K ++L LQQQ
Sbjct: 269 -----MDAATAEQQQCQDFLLRSKSQRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQH 323
Query: 330 NDTQRAAAAAALML--NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
ND QRAAAAAALML +++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTF
Sbjct: 324 NDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTF 378
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
REEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKP
Sbjct: 379 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKP 438
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWR 503
YKEKGKVPDKYRK Q G+FS C TPTGLD RDPFDL QLGARM N+T +M+ R
Sbjct: 439 YKEKGKVPDKYRKHQ-----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLR 493
Query: 504 RK---MEEQADLQQALELQSRRLMGLQLLDVK 532
RK ++ A+LQQA+EL SRRLM LQLLD+K
Sbjct: 494 RKLEEQQQAAELQQAIELHSRRLMDLQLLDLK 525
>gi|115452803|ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|215734917|dbj|BAG95639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 302/572 (52%), Positives = 370/572 (64%), Gaps = 87/572 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA---- 111
L S +SP+ P++ SPFL +RQNS + L + S +SW+ A
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPL---SASSPSSWAQAQPFS 117
Query: 112 -----VTDLPNP-DDLIPQTTTTMNSSA--LPFYGNGTGSGSSDVI-DEYQLQDQLSFLN 162
V ++ ++LI + ++A PF+ G DV+ D++QLQ+QL+FLN
Sbjct: 118 RSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRG-----GDVLLDDFQLQEQLAFLN 172
Query: 163 ESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV-LGSS 221
E N + Q + S P + W G HRRS SV+++ LG
Sbjct: 173 EGGVNPSHPLQGF---DGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGG 229
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID 281
S D G GW+PCLY+ARG+CKNGSSCRFVHG D AA L G+
Sbjct: 230 SSD---GFGWKPCLYYARGFCKNGSSCRFVHG-----------DDAAALTGAA------- 268
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQ 329
+ + +A Q Q L + SQ +G ++FPYSP K ++L LQQQ
Sbjct: 269 -----MDAATAEQQQCQDFLLRSKSQRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQH 323
Query: 330 NDTQRAAAAAALML--NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
ND QRAAAAAALML +++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTF
Sbjct: 324 NDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTF 378
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
REEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKP
Sbjct: 379 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKP 438
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWR 503
YKEKGKVPDKYRK Q G+FS C TPTGLD RDPFDL QLGARM N+T +M+ R
Sbjct: 439 YKEKGKVPDKYRKHQ-----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLR 493
Query: 504 RK---MEEQADLQQALELQSRRLMGLQLLDVK 532
RK ++ A+LQQA+EL SRRLM LQLLD+K
Sbjct: 494 RKLEEQQQAAELQQAIELHSRRLMDLQLLDLK 525
>gi|222637701|gb|EEE67833.1| hypothetical protein OsJ_25610 [Oryza sativa Japonica Group]
Length = 696
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 312/582 (53%), Positives = 368/582 (63%), Gaps = 104/582 (17%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 L-VRASNSPNSPSTPSSP-----SPF-LARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVT 113
L + ++ P +P++ S+ SPF L+RQNS T PS S +
Sbjct: 61 LGLLPASGPGTPTSVSAAAAAAHSPFMLSRQNSGRCG----------TAPSPLSEMVGLG 110
Query: 114 DLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQ 173
D +LI + PF+G ++DE QLQDQL+FLNE G++
Sbjct: 111 D-----ELI--SPANGGGPPSPFFGG------DPLMDELQLQDQLAFLNEGGVPAGHQM- 156
Query: 174 DLFYPSQMDLSSSPPNGATDSMLFPSY---WGGGSSVHRRSCSVSDVLGSSSDDLNSGLG 230
D G D LF SY W G HRRS SVS++ +D GLG
Sbjct: 157 -----PMFDGGECRSPGGGDGGLF-SYNLGWANGGPGHRRSASVSELCLGGAD----GLG 206
Query: 231 WRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHE-LLRS 289
W+PCLY+ARGYCKNGS+CRFVHGG + D A + PS +E C + L+RS
Sbjct: 207 WKPCLYYARGYCKNGSACRFVHGG-------LPDDAAGKM--DPSAVE--QQCQDFLIRS 255
Query: 290 KSAAAAQVQQQRLAAASQLMGSSSFPYSPK--------------SMNLFLQQQQNDTQRA 335
KS QRLAAA+ FPYSP S+ L QQQQN++QRA
Sbjct: 256 KS--------QRLAAAA-------FPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRA 300
Query: 336 AAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
AAAAALML D HKF GR RLER DF A ++NP SRQIYLTFPADSTFREEDVSN
Sbjct: 301 AAAAALMLGGDEAHKFMGRPRLERADF-----ASMMNPGSRQIYLTFPADSTFREEDVSN 355
Query: 394 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKV 453
YFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKV
Sbjct: 356 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKV 415
Query: 454 PDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWRRKMEEQA 510
PDK KQ Q ER +FS C TPTGLD+RDPFD+ QLGARM N+ +ML RRK+EEQ
Sbjct: 416 PDK--KQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQ 473
Query: 511 DLQQA---LELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
+ +EL SRRLMGLQLLD K RA + +PI +P
Sbjct: 474 QAAELQQAIELHSRRLMGLQLLDFKS----RAAAAPTPIGNP 511
>gi|414866608|tpg|DAA45165.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 675
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 308/613 (50%), Positives = 373/613 (60%), Gaps = 98/613 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE+L+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLA--RQNSSSS---------RLLGSNNLPPLTIPSGTS 107
L P SP++ ++ +PFL RQNS + ++ P + + TS
Sbjct: 61 L--GLLLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWSHAPVFSRSNSTS 118
Query: 108 WSTAVTD------LPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFL 161
TA LP+P +N A PF+ G ++D+ QLQ+QL+FL
Sbjct: 119 NGTAEEAAGAGEELPSP----------VNGGAAPFFPRQAGDA---LLDDLQLQEQLAFL 165
Query: 162 NESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSS 221
NE GN L + S P A F W G HRRS SV+++
Sbjct: 166 NEGG---GNPAHQLLGFDGGECRSPGPGDADGMFAFGLGWHNGGPAHRRSSSVNELCLGG 222
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID 281
G GW+PCLY+ARG+CKNG SCRFVHGG SD AA L G+ KME
Sbjct: 223 GGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGL--------SDDAAALAGA--KMEAAA 272
Query: 282 HCHE-----LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLF 324
+ L+RSK Q +G ++FPYSP K ++
Sbjct: 273 DQQQQCQDFLIRSKG---------------QRLGPAAFPYSPTGSLPGSPSAASKCLSFL 317
Query: 325 LQQQQNDTQRAAAAAALMLN--EDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFP 381
LQQQQ RAAAAA+LML ++ HKF R RL+R DF A ++NP SRQIYLTFP
Sbjct: 318 LQQQQQQHDRAAAAASLMLGGGDEAHKFMARPRLDRADF-----ASMMNPGSRQIYLTFP 372
Query: 382 ADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
ADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDAR
Sbjct: 373 ADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDAR 432
Query: 442 VLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT-GLDSRDPFDL-QLGARMFY--NNT 497
VLVKPYKEKGKVPDKYRKQQQ G+FS C TPT GLD+RDPFDL QLGARM N+
Sbjct: 433 VLVKPYKEKGKVPDKYRKQQQ----GDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSA 488
Query: 498 QDMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPN 554
++L RRK+EEQ A+LQ A+ELQSRRLMGLQLLD+K A + +PI + S +
Sbjct: 489 NELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIANAFASSH 548
Query: 555 IFHQNLVFPPLHS 567
V PL S
Sbjct: 549 PLSTMAVESPLES 561
>gi|242041061|ref|XP_002467925.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
gi|241921779|gb|EER94923.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
Length = 680
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 300/584 (51%), Positives = 369/584 (63%), Gaps = 77/584 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE+L+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLA--RQNSSSSRLLGS---------NNLPPLTIPSGTS 107
L P SP++ ++ +PFL RQNS + + P + + TS
Sbjct: 61 L--GLLLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPVFSRSNSTS 118
Query: 108 WSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQN 167
TA ++L + +N A PFY + + ++D+ QLQ+QL+FLNE
Sbjct: 119 NGTAEESTGAGEEL----PSPVNGGAAPFYPHQSADA---LLDDLQLQEQLAFLNEGG-- 169
Query: 168 LGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNS 227
N + L + S P A F W G HRRS SV++ L S
Sbjct: 170 -ANPSHQLPGFDGGECRSPGPGDAGGMFAFGLGWPNGGPAHRRSASVNE-LCLGSGGGGD 227
Query: 228 GLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELL 287
G GW+PCLY+ARG+CKNG SCRFVHGG D AA L G+ ++
Sbjct: 228 GFGWKPCLYYARGFCKNGGSCRFVHGGLP--------DDAAALAGA-----------KMD 268
Query: 288 RSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQNDTQRA 335
+ Q Q + + SQ +G ++FPYSP K ++ LQQQQ RA
Sbjct: 269 AAADQQQQQCQDFLIRSKSQRLGPAAFPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRA 328
Query: 336 AAAAALMLN--EDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVS 392
AAAA+LML ++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTFREEDVS
Sbjct: 329 AAAASLMLGGGDEAHKFMGRPRLDRADF-----ANMMNPGSRQIYLTFPADSTFREEDVS 383
Query: 393 NYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK 452
NYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGK
Sbjct: 384 NYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGK 443
Query: 453 VPDKYRKQQQQVERGEFSPCGT-PTGLDSRDPFDL-QLGARMFY--NNTQDMLWRRKMEE 508
VPDKYRKQQQ G+FS C T P GLD+RDPFDL QLGARM N+ ++L RRK+EE
Sbjct: 444 VPDKYRKQQQ----GDFSGCTTPPGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEE 499
Query: 509 Q---ADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
Q A+LQQA+ELQSRRLMGLQLLD+K A + SP+P+P
Sbjct: 500 QQQVAELQQAIELQSRRLMGLQLLDLKARAAATAAAA-SPLPTP 542
>gi|33146675|dbj|BAC80021.1| putative DAZ associated protein 1 [Oryza sativa Japonica Group]
Length = 682
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 311/600 (51%), Positives = 370/600 (61%), Gaps = 115/600 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 L-VRASNSPNSPSTPSSP-----SPF-LARQNSS------------------SSRLLGSN 95
L + ++ P +P++ ++ SPF L+RQNS + N
Sbjct: 61 LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120
Query: 96 NLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQ 155
N +I +G D+LI + PF+G ++DE QLQ
Sbjct: 121 N----SISNGAGEEMVGLG----DELI--SPANGGGPPSPFFGG------DPLMDELQLQ 164
Query: 156 DQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY---WGGGSSVHRRSC 212
DQL+FLNE G++ D G D LF SY W G HRRS
Sbjct: 165 DQLAFLNEGGVPAGHQM------PMFDGGECRSPGGGDGGLF-SYNLGWANGGPGHRRSA 217
Query: 213 SVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVG 272
SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG + D A +
Sbjct: 218 SVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGG-------LPDDAAGKM-- 264
Query: 273 SPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPK------------ 319
PS +E C + L+RSKS QRLAAA+ FPYSP
Sbjct: 265 DPSAVE--QQCQDFLIRSKS--------QRLAAAA-------FPYSPTGSLPGSPSAATK 307
Query: 320 --SMNLFLQQQQNDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQ 375
S+ L QQQQN++QRAAAAAALML D HKF GR RLER DF A ++NP SRQ
Sbjct: 308 CLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRPRLERADF-----ASMMNPGSRQ 362
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPH 435
IYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPH
Sbjct: 363 IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 422
Query: 436 FVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY 494
F+CDARVLVKPYKEKGKVPDK KQ Q ER +FS C TPTGLD+RDPFD+ QLGARM
Sbjct: 423 FICDARVLVKPYKEKGKVPDK--KQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQ 480
Query: 495 --NNTQDMLWRRKMEEQADLQQA---LELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
N+ +ML RRK+EEQ + +EL SRRLMGLQLLD K RA + +PI +P
Sbjct: 481 HSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQLLDFKS----RAAAAPTPIGNP 536
>gi|125559631|gb|EAZ05167.1| hypothetical protein OsI_27364 [Oryza sativa Indica Group]
Length = 721
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 311/600 (51%), Positives = 370/600 (61%), Gaps = 115/600 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 L-VRASNSPNSPSTPSSP-----SPF-LARQNSS------------------SSRLLGSN 95
L + ++ P +P++ ++ SPF L+RQNS + N
Sbjct: 61 LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120
Query: 96 NLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQ 155
N +I +G D+LI + PF+G ++DE QLQ
Sbjct: 121 N----SISNGAGEEMVGLG----DELI--SPANGGGPPSPFFGG------DPLMDELQLQ 164
Query: 156 DQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY---WGGGSSVHRRSC 212
DQL+FLNE G++ D G D LF SY W G HRRS
Sbjct: 165 DQLAFLNEGGVPAGHQM------PMFDGGECRSPGGGDGGLF-SYNLGWANGGPGHRRSA 217
Query: 213 SVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVG 272
SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG + D A +
Sbjct: 218 SVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGG-------LPDDAAGKM-- 264
Query: 273 SPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPK------------ 319
PS +E C + L+RSKS QRLAAA+ FPYSP
Sbjct: 265 DPSAVE--QQCQDFLIRSKS--------QRLAAAA-------FPYSPTGSLPGSPSAATK 307
Query: 320 --SMNLFLQQQQNDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQ 375
S+ L QQQQN++QRAAAAAALML D HKF GR RLER DF A ++NP SRQ
Sbjct: 308 CLSLLLQQQQQQNESQRAAAAAALMLGGDEAHKFMGRPRLERADF-----ASMMNPGSRQ 362
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPH 435
IYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPH
Sbjct: 363 IYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 422
Query: 436 FVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY 494
F+CDARVLVKPYKEKGKVPDK KQ Q ER +FS C TPTGLD+RDPFD+ QLGARM
Sbjct: 423 FICDARVLVKPYKEKGKVPDK--KQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQ 480
Query: 495 --NNTQDMLWRRKMEEQADLQQA---LELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
N+ +ML RRK+EEQ + +EL SRRLMGLQLLD K RA + +PI +P
Sbjct: 481 HSNSANEMLLRRKLEEQQQAAELQQAIELHSRRLMGLQLLDFKS----RAAAAPTPIGNP 536
>gi|218192752|gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 298/572 (52%), Positives = 367/572 (64%), Gaps = 89/572 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA---- 111
L S +SP+ P++ SPFL +RQNS + L + S +SW+ A
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPL---SASSPSSWAQAQPFS 117
Query: 112 -----VTDLPNP-DDLIPQTTTTMNSSA--LPFYGNGTGSGSSDVI-DEYQLQDQLSFLN 162
V ++ ++LI + ++A PF+ G DV+ D++QLQ+QL+FLN
Sbjct: 118 RSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRG-----GDVLLDDFQLQEQLAFLN 172
Query: 163 ESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV-LGSS 221
E N + Q + S P + W G HRRS SV+++ LG
Sbjct: 173 EGGVNPSHPLQGF---DGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGG 229
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID 281
S D G GW+PCLY+ARG+CKNGSSCRFVHG D AA L G+
Sbjct: 230 SSD---GFGWKPCLYYARGFCKNGSSCRFVHG-----------DDAAALTGAA------- 268
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQ 329
+ + +A Q Q L + SQ +G ++FPYSP K ++L LQQQ
Sbjct: 269 -----MDAATAEQQQCQDFLLRSKSQRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQH 323
Query: 330 NDTQRAAAAAALML--NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
ND QRAAAAAALML +++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTF
Sbjct: 324 NDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTF 378
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
REEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKP
Sbjct: 379 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKP 438
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWR 503
YKEKGKVPDK + G+FS C TPTGLD RDPFDL QLGARM N+T +M+ R
Sbjct: 439 YKEKGKVPDKKHQ-------GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMILR 491
Query: 504 RK---MEEQADLQQALELQSRRLMGLQLLDVK 532
RK ++ A+LQQA+EL SRRLM LQLLD+K
Sbjct: 492 RKLEEQQQAAELQQAIELHSRRLMDLQLLDLK 523
>gi|222624858|gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 298/572 (52%), Positives = 367/572 (64%), Gaps = 89/572 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA---- 111
L S +SP+ P++ SPFL +RQNS + L + S +SW+ A
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPL---SASSPSSWAQAQPFS 117
Query: 112 -----VTDLPNP-DDLIPQTTTTMNSSA--LPFYGNGTGSGSSDVI-DEYQLQDQLSFLN 162
V ++ ++LI + ++A PF+ G DV+ D++QLQ+QL+FLN
Sbjct: 118 RSNGSVDEVVGAGEELISPANSGGGAAANAPPFFPRG-----GDVLLDDFQLQEQLAFLN 172
Query: 163 ESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV-LGSS 221
E N + Q + S P + W G HRRS SV+++ LG
Sbjct: 173 EGGVNPSHPLQGF---DGAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGG 229
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID 281
S D G GW+PCLY+ARG+CKNGSSCRFVHG D AA L G+
Sbjct: 230 SSD---GFGWKPCLYYARGFCKNGSSCRFVHG-----------DDAAALTGAA------- 268
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQ 329
+ + +A Q Q L + SQ +G ++FPYSP K ++L LQQQ
Sbjct: 269 -----MDAATAEQQQCQDFLLRSKSQRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQH 323
Query: 330 NDTQRAAAAAALML--NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
ND QRAAAAAALML +++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTF
Sbjct: 324 NDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTF 378
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
REEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKP
Sbjct: 379 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKP 438
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWR 503
YKEKGKVPDK + G+FS C TPTGLD RDPFDL QLGARM N+T +M+ R
Sbjct: 439 YKEKGKVPDKKHQ-------GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLR 491
Query: 504 RK---MEEQADLQQALELQSRRLMGLQLLDVK 532
RK ++ A+LQQA+EL SRRLM LQLLD+K
Sbjct: 492 RKLEEQQQAAELQQAIELHSRRLMDLQLLDLK 523
>gi|449533070|ref|XP_004173500.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 450
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/301 (78%), Positives = 265/301 (88%), Gaps = 19/301 (6%)
Query: 280 IDHCHELLRSKSAAAAQVQQQRLAAASQLMGSS-SFPYSPKSMNLFLQQQQNDTQRAAAA 338
++ CHELLRSKS+A QQRLAAASQLM S+ SFPYSPKS+N LQQQQND+QRAAAA
Sbjct: 1 MEQCHELLRSKSSA-----QQRLAAASQLMASANSFPYSPKSINFLLQQQQNDSQRAAAA 55
Query: 339 AA----LMLNEDMHKFGRS-RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
AA LM+ ED+HKF RS RLERN+FS+NGSAGI+NPASRQIYLTFPADSTF+EEDVSN
Sbjct: 56 AAAAAALMMGEDLHKFSRSSRLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSN 115
Query: 394 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKV 453
YFS+YGPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCDARVLVKPYKEKGKV
Sbjct: 116 YFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKV 175
Query: 454 PDKYRKQQQQVERGEFSPCGTPTGLDSRDPFD-LQLGARMFYNNTQDMLWRRKMEEQADL 512
PDKYRK QQQ++R +FSPCGTPTGLDSR+ +D LQLG+RMFYN+ QD+LWRRK+EEQ
Sbjct: 176 PDKYRK-QQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQAD 233
Query: 513 QQALELQSRRLMGLQLLDVKK----HHHHRALSTGSPIPSPTHSPN-IFHQNLVFPPLHS 567
Q L+LQSRRL+ LQLLDVKK HHHHRALSTGSPIPSPTHSPN +F QNL+FP + S
Sbjct: 234 LQTLDLQSRRLLNLQLLDVKKNQLPHHHHRALSTGSPIPSPTHSPNPLFAQNLIFPSIRS 293
Query: 568 S 568
S
Sbjct: 294 S 294
>gi|297819906|ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
gi|297323674|gb|EFH54095.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 298/570 (52%), Positives = 337/570 (59%), Gaps = 151/570 (26%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI+KA+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 L--VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L + S SP WS +
Sbjct: 61 LGLMNCSRSP---------------------------------------WS-------HQ 74
Query: 119 DDLI-PQTT--TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDL 175
D+LI P+ +++N ++LPFY NG G S D+ ++++L D + N S LG
Sbjct: 75 DELISPKNNRGSSLNPASLPFYANG-GRSSRDLTNDFELMDDV---NSRSDFLG------ 124
Query: 176 FYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCS-VSDVLGSSSDDLNSGLGWRPC 234
SVH RS S V D LG D + G G PC
Sbjct: 125 ------------------------------SVHARSGSCVLDGLGYGGDS-DLGFGGVPC 153
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
YFARG+CKNG+SCRFVH SDG A LVGSPS++E LLRS S
Sbjct: 154 SYFARGFCKNGASCRFVH-----------SDGGADLVGSPSRIE-------LLRSNSVPP 195
Query: 295 AQVQQQRLAAASQLMGSSSFP-YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRS 353
RLA M SS P +SPK +NL QQND QRAAAA LM+ +++ K GR
Sbjct: 196 ------RLA--HHFMTRSSLPSFSPKGVNL----QQNDIQRAAAA--LMIGDELQKLGRW 241
Query: 354 RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRM 413
R ER D S + PASRQIYLTFPADS FREEDVSNYFS +GPVQDVRIPYQQKRM
Sbjct: 242 RPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRM 296
Query: 414 FGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCG 473
FGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVPDKYR Q ER E S
Sbjct: 297 FGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYR-TNQTTER-ELS--- 351
Query: 474 TPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
PTGLDS P D+ LG R FYNNTQD+LWR K EE + LELQSRRLM LQLLDVKK
Sbjct: 352 -PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKK 403
Query: 534 HHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
H + P+ HSPN F Q+L+ P
Sbjct: 404 HFQLNS-------PTNIHSPNPFSQSLISP 426
>gi|357119900|ref|XP_003561671.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Brachypodium distachyon]
Length = 673
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 288/565 (50%), Positives = 349/565 (61%), Gaps = 77/565 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP+ A+KIMGLL++QDHGEKEMIRLAFGPE+L+ +V+ KAR+E
Sbjct: 1 MDAYEATKVVFSRIQALDPDEAAKIMGLLIIQDHGEKEMIRLAFGPESLLQTVMAKARRE 60
Query: 61 LVRASNSPNSPSTPSSPSPF--LARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L S S + S P SPF L+RQNS + S ++ S +SW+ A N
Sbjct: 61 LGLLSASSSPTSAPRPQSPFQQLSRQNSGRAPPSPSPL----SVSSPSSWAQAPVFSRN- 115
Query: 119 DDLIPQTTTTMNSSALPFYGNGTGSGS------SDVIDEYQLQDQLSFLNESSQNLGNKN 172
+ + P+ L GN + S ++D+ QLQ+QL+FLN+ N
Sbjct: 116 NGVAPEDVAGAGEQELMSPGNNGAAASFFPRAGDALVDDLQLQEQLAFLNDGGGATMNHA 175
Query: 173 QDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV-LGSSSDDLNSGLGW 231
L SP G M FP Y G + HRRS S +++ LG +S LGW
Sbjct: 176 HQLGGTFDGGDCRSPGPGDGSGM-FP-YGLGWAPGHRRSASANELFLGDNS------LGW 227
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHE-LLRSK 290
+PCLY+ARG+CKNGSSCRFVHG +L D A P + CH+ LLR K
Sbjct: 228 KPCLYYARGFCKNGSSCRFVHGA-----SLQDVDDA------PVAEQQQQQCHDFLLRYK 276
Query: 291 SAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQNDTQRAAAA 338
S QRL S FPYSP K ++ +QQQ ND QR A
Sbjct: 277 S--------QRLGHPSH-----GFPYSPTGSLPGSPSSASKCLSFLMQQQHNDNQRYLLA 323
Query: 339 AALML---NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNY 394
AA M+ ++ HKF GR RL+R D + + + NP SRQIYLTFPADSTFREEDVS Y
Sbjct: 324 AAAMILGGGDEAHKFMGRPRLDRTDLA----SMMNNPGSRQIYLTFPADSTFREEDVSGY 379
Query: 395 FSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVP 454
F +YGPV DVRIPYQQKRMFGFVTFV PETV++ILAKGNPHF+CDARVLVKPYKEKGKVP
Sbjct: 380 FRMYGPVHDVRIPYQQKRMFGFVTFVLPETVRLILAKGNPHFICDARVLVKPYKEKGKVP 439
Query: 455 DKYRKQQQQVERGEFSPCGTPTGLDSR-DPFDL-QLGARM--FYNNTQDMLWRRKMEEQ- 509
DKYRKQQQQ G+FS C TP GLD R DPFDL Q+GARM N+ +M+ RRK EE
Sbjct: 440 DKYRKQQQQ---GDFSGCTTPNGLDGRADPFDLHQIGARMPQHSNSANEMMMRRKQEEDQ 496
Query: 510 --ADLQQALELQSRRLMGLQLLDVK 532
A+ Q A+ELQSRRLMGLQLLD+K
Sbjct: 497 QAAEFQHAVELQSRRLMGLQLLDLK 521
>gi|19423979|gb|AAL87320.1| unknown protein [Arabidopsis thaliana]
Length = 540
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 295/570 (51%), Positives = 337/570 (59%), Gaps = 150/570 (26%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI+KA+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 L--VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L + S SP WS +
Sbjct: 61 LGLMNCSRSP---------------------------------------WS-------HQ 74
Query: 119 DDLI-PQTT--TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDL 175
D+LI P+ +++N ++LPFY NG G S D+ ++++L D ++ + S+ LG
Sbjct: 75 DELISPKNNRGSSLNPASLPFYANG-GRSSRDLTNDFELMDDMN--SRSTDFLG------ 125
Query: 176 FYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCS-VSDVLGSSSDDLNSGLGWRPC 234
SVH RS S V D LG D + G G PC
Sbjct: 126 ------------------------------SVHARSGSCVLDGLGYGGDS-DLGFGGVPC 154
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
YFARG+CKNG+SCRFVH SDG A LVGSPS++E LLRS S
Sbjct: 155 SYFARGFCKNGASCRFVH-----------SDGGADLVGSPSRIE-------LLRSNSVPP 196
Query: 295 AQVQQQRLAAASQLMGSSSFP-YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRS 353
RLA M SS P +S K +NL QQND QRAAAA LM+ +++ K GR
Sbjct: 197 ------RLA--HHFMTRSSLPSFSTKGVNL----QQNDVQRAAAA--LMIGDELQKLGRW 242
Query: 354 RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRM 413
R ER D S + PASRQIYLTFPADS FREEDVSNYFS +GPVQDVRIPYQQKRM
Sbjct: 243 RPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRM 297
Query: 414 FGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCG 473
FGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVPDKYR Q V E S
Sbjct: 298 FGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTVR--ELS--- 352
Query: 474 TPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
PTGLDS P D+ LG R FYNNTQD+LWR K EE + LELQSRRLM LQLLDVKK
Sbjct: 353 -PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKK 404
Query: 534 HHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
H + P+ HSPN F Q+L+ P
Sbjct: 405 HFQLNS-------PTNIHSPNPFSQSLISP 427
>gi|21594547|gb|AAM66020.1| unknown [Arabidopsis thaliana]
Length = 540
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 296/570 (51%), Positives = 339/570 (59%), Gaps = 150/570 (26%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI+KA+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 L--VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L + S SP WS +
Sbjct: 61 LGLMNCSRSP---------------------------------------WS-------HQ 74
Query: 119 DDLI-PQTT--TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDL 175
D+LI P+ +++N ++LPFY NG G S D+ ++++L D ++ + S+ LG
Sbjct: 75 DELISPKNNRGSSLNPASLPFYANG-GRSSRDLTNDFELMDDMN--SRSTDFLG------ 125
Query: 176 FYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCS-VSDVLGSSSDDLNSGLGWRPC 234
SVH RS S V D LG D + G G PC
Sbjct: 126 ------------------------------SVHARSGSCVLDGLGYGGDS-DLGFGGVPC 154
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
YFARG+CKNG+SCRFVH SDG A LVGSPS+++ LLRS S
Sbjct: 155 SYFARGFCKNGASCRFVH-----------SDGGADLVGSPSRID-------LLRSNSVPP 196
Query: 295 AQVQQQRLAAASQLMGSSSFP-YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRS 353
RLA M SS P +SPK +NL QQND QRAAAA LM+ +++ K GR
Sbjct: 197 ------RLA--HHFMTRSSLPSFSPKGVNL----QQNDVQRAAAA--LMIGDELQKLGRW 242
Query: 354 RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRM 413
R ER D S + PASRQIYLTFPADS FREEDVSNYFS +GPVQDVRIPYQQKRM
Sbjct: 243 RPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRM 297
Query: 414 FGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCG 473
FGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVPDKYR Q ER E S
Sbjct: 298 FGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYR-TNQTTER-ELS--- 352
Query: 474 TPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
PTGLDS P D+ LG R FYNNTQD+LWR K EE + LELQSRRLM LQLLDVKK
Sbjct: 353 -PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKK 404
Query: 534 HHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
H + P+ HSPN F Q+L+ P
Sbjct: 405 HFQLNS-------PTNIHSPNPFSQSLISP 427
>gi|15231090|ref|NP_190763.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|79314761|ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|75337705|sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46;
Short=AtC3H46
gi|4678924|emb|CAB41315.1| putative protein [Arabidopsis thaliana]
gi|23297746|gb|AAN13016.1| unknown protein [Arabidopsis thaliana]
gi|222422911|dbj|BAH19442.1| AT3G51950 [Arabidopsis thaliana]
gi|332645345|gb|AEE78866.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|332645346|gb|AEE78867.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
Length = 540
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 296/570 (51%), Positives = 338/570 (59%), Gaps = 150/570 (26%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MDGYEATRIV SRIQ+LDPENASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI+KA+KE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 L--VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L + S SP WS +
Sbjct: 61 LGLMNCSRSP---------------------------------------WS-------HQ 74
Query: 119 DDLI-PQTT--TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDL 175
D+LI P+ +++N ++LPFY NG G S D+ ++++L D ++ + S+ LG
Sbjct: 75 DELISPKNNRGSSLNPASLPFYANG-GRSSRDLTNDFELMDDMN--SRSTDFLG------ 125
Query: 176 FYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCS-VSDVLGSSSDDLNSGLGWRPC 234
SVH RS S V D LG D + G G PC
Sbjct: 126 ------------------------------SVHARSGSCVLDGLGYGGDS-DLGFGGVPC 154
Query: 235 LYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA 294
YFARG+CKNG+SCRFVH SDG A LVGSPS++E LLRS S
Sbjct: 155 SYFARGFCKNGASCRFVH-----------SDGGADLVGSPSRIE-------LLRSNSVPP 196
Query: 295 AQVQQQRLAAASQLMGSSSFP-YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRS 353
RLA M SS P +S K +NL QQND QRAAAA LM+ +++ K GR
Sbjct: 197 ------RLA--HHFMTRSSLPSFSTKGVNL----QQNDVQRAAAA--LMIGDELQKLGRW 242
Query: 354 RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRM 413
R ER D S + PASRQIYLTFPADS FREEDVSNYFS +GPVQDVRIPYQQKRM
Sbjct: 243 RPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRM 297
Query: 414 FGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCG 473
FGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVPDKYR Q ER E S
Sbjct: 298 FGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYR-TNQTTER-ELS--- 352
Query: 474 TPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
PTGLDS P D+ LG R FYNNTQD+LWR K EE + LELQSRRLM LQLLDVKK
Sbjct: 353 -PTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKK 404
Query: 534 HHHHRALSTGSPIPSPTHSPNIFHQNLVFP 563
H + P+ HSPN F Q+L+ P
Sbjct: 405 HFQLNS-------PTNIHSPNPFSQSLISP 427
>gi|226507390|ref|NP_001152488.1| nucleic acid binding protein [Zea mays]
gi|195656755|gb|ACG47845.1| nucleic acid binding protein [Zea mays]
Length = 653
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 298/588 (50%), Positives = 356/588 (60%), Gaps = 124/588 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L-VRASNSPNSPSTPSSP---SPFL-ARQNSS---------------------SSRLLGS 94
L + S P +P++ ++ SPFL +RQNS +
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQL 154
N++ + +G DL +P N+ PF+ G ++DE QL
Sbjct: 121 NSV----VSNGAPAEALAADLMSP-------AAAGNAPPSPFFAAG-----EPLLDELQL 164
Query: 155 QDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY----WGGGSSVHRR 210
Q+QL+FL++++ G LF D S G+ D+ F Y W G HRR
Sbjct: 165 QEQLAFLSDAAA--GGHQLPLF-----DASECRSPGSGDAAGFFPYGALGWANGGPGHRR 217
Query: 211 SCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATL 270
S SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG T AT
Sbjct: 218 SSSVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLTDD---------ATA 264
Query: 271 VGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP----------- 318
+ +E C + LLRSKS QRLAA FPYSP
Sbjct: 265 KMDTATLE--QQCQDILLRSKS--------QRLAA---------FPYSPTGSVPGSPSAA 305
Query: 319 -KSMNLFLQQQQND-----TQRAAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIVN 370
K ++L L QQQ AAAAAALML +D HKF GR RL+R D A +VN
Sbjct: 306 TKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADL-----ASLVN 360
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILA 430
P SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILA
Sbjct: 361 PGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 420
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE--FSPCGTPTGLDSRD-PFDL- 486
KGNPHF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER FS GLD R+ DL
Sbjct: 421 KGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS-----NGLDGRENHLDLH 475
Query: 487 QLGARMFY--NNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVK 532
QLGARM ++ +ML RRK+EEQ QQA+ELQSRRLMGLQLLD+K
Sbjct: 476 QLGARMLQHSHSANEMLLRRKLEEQ---QQAMELQSRRLMGLQLLDLK 520
>gi|115452805|ref|NP_001050003.1| Os03g0329200 [Oryza sativa Japonica Group]
gi|122247068|sp|Q10LZ9.1|C3H23_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 23;
Short=OsC3H23
gi|108707944|gb|ABF95739.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108707945|gb|ABF95740.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548474|dbj|BAF11917.1| Os03g0329200 [Oryza sativa Japonica Group]
Length = 677
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 291/589 (49%), Positives = 372/589 (63%), Gaps = 93/589 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV-----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA--- 111
L +A++S SP+ P++ SPFL +RQNS PS +SW+ A
Sbjct: 61 LALLPPPQAASS--SPTVPAAHSPFLLSRQNSGR-----------CPAPSPSSWAQAQPF 107
Query: 112 -----VTDLPNPDDLIPQTTTTMN---------SSALPFYGNGTGSGSSDVIDEYQLQDQ 157
+ + D+++ M+ ++A PF+ G + ++D+++LQ+Q
Sbjct: 108 SRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDA----LLDDFELQEQ 163
Query: 158 LSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV 217
L+FL++ + + N L + S P + + + W G HRRS SV+++
Sbjct: 164 LAFLHDGAGGV-NPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNEL 222
Query: 218 -LGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK 276
LG G GW+PCLY+ARG+CKNGS+CRFVHGG SD AA + +
Sbjct: 223 CLG------GDGFGWKPCLYYARGFCKNGSTCRFVHGGL--------SDDAAMDATTAEQ 268
Query: 277 MEPIDHCHELLRSKSAAAAQVQQQRLA-AASQLMGSSSFPYSPKSMNLFLQQQ------Q 329
+ D LLRSKS QRL AA + S P SP + + L
Sbjct: 269 QQCQDF---LLRSKS--------QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQH 317
Query: 330 NDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFR 387
ND QRAAAAA ++ D HKF GR RL+R DF A ++NP SRQIYLTFPADSTFR
Sbjct: 318 NDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFR 372
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPY 447
EEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPY
Sbjct: 373 EEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPY 432
Query: 448 KEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWRR 504
KEKGKVPDKYRKQQQ G+F C +PTGLD+RDPFD QLGARM N+ +++ RR
Sbjct: 433 KEKGKVPDKYRKQQQ----GDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRR 487
Query: 505 K---MEEQADLQQALELQSRRLMGLQLLDVKKHHH-HRALSTGSPIPSP 549
K ++ A+LQQA++L SRRL+GLQLLD+K H A +T +P+P
Sbjct: 488 KLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTP 536
>gi|413955828|gb|AFW88477.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 684
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 297/596 (49%), Positives = 366/596 (61%), Gaps = 106/596 (17%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE+L+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLA--RQNSSSSRLLGS---------NNLPPLTIPSGTS 107
L P SP++ ++ +PFL RQNS + + P + + TS
Sbjct: 61 L--GLLLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPAFSRSNSTS 118
Query: 108 --------WSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLS 159
+ A +LP+P +N A PF+ + +G ++D+ QLQ+QL+
Sbjct: 119 NGTGTAEEAAGAGEELPSP----------VNGGAAPFFPHQSGDA---LLDDLQLQEQLA 165
Query: 160 FLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLG 219
FLNE S N ++ + S P A+ F W G HRRS SV++
Sbjct: 166 FLNEGSANPAHQLPGFV---GGECRSPGPGDASGMFAFGLGWPNGGPAHRRSSSVNEFC- 221
Query: 220 SSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEP 279
G GW+PCLY+ARG+CKNG SCRFVHGG SD AA G+ KME
Sbjct: 222 LGGGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGL--------SDDAAAFAGA--KMEA 271
Query: 280 IDHCHE-------LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KS 320
+ L+RSKS Q +GS++FPYS K
Sbjct: 272 AADQQQQQQCQDFLIRSKS---------------QRLGSAAFPYSSTGSLPGSPSAASKC 316
Query: 321 MNLFLQQQQNDTQRAAAAAALMLN--EDMHKF-GRSRLERNDFSINGSAGIVNPASRQIY 377
++ LQQQQ RAAAAA+LML ++ HKF GR RL+R DF A ++NP SRQIY
Sbjct: 317 LSFLLQQQQQQHDRAAAAASLMLGGGDEAHKFMGRPRLDRADF-----ANMMNPGSRQIY 371
Query: 378 LTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFV 437
LTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+
Sbjct: 372 LTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFI 431
Query: 438 CDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT-GLDSRDPFDL-QLGARMFYN 495
CDARVLVKPYKEKGKVPDK RK QQ G+FS C TPT GLD PFDL QLG RM +
Sbjct: 432 CDARVLVKPYKEKGKVPDKCRKPQQ----GDFSGCTTPTGGLDGGYPFDLHQLGGRMLQH 487
Query: 496 NT--QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
++ ++L RRK+EEQ QQA+ELQSRRLMGLQLLD+K A + SP+P+P
Sbjct: 488 SSSANELLLRRKLEEQ---QQAIELQSRRLMGLQLLDLKA---RAAAAAASPLPTP 537
>gi|413955827|gb|AFW88476.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 687
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 294/596 (49%), Positives = 366/596 (61%), Gaps = 103/596 (17%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHGEKEMIRLAFGPE+L+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLA--RQNSSSSRLLGS---------NNLPPLTIPSGTS 107
L P SP++ ++ +PFL RQNS + + P + + TS
Sbjct: 61 L--GLLLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWGHAPAFSRSNSTS 118
Query: 108 --------WSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLS 159
+ A +LP+P +N A PF+ + +G ++D+ QLQ+QL+
Sbjct: 119 NGTGTAEEAAGAGEELPSP----------VNGGAAPFFPHQSGDA---LLDDLQLQEQLA 165
Query: 160 FLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLG 219
FLNE S N ++ + S P A+ F W G HRRS SV++
Sbjct: 166 FLNEGSANPAHQLPGFV---GGECRSPGPGDASGMFAFGLGWPNGGPAHRRSSSVNEFC- 221
Query: 220 SSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEP 279
G GW+PCLY+ARG+CKNG SCRFVHGG SD AA G+ KME
Sbjct: 222 LGGGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGL--------SDDAAAFAGA--KMEA 271
Query: 280 IDHCHE-------LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KS 320
+ L+RSKS Q +GS++FPYS K
Sbjct: 272 AADQQQQQQCQDFLIRSKS---------------QRLGSAAFPYSSTGSLPGSPSAASKC 316
Query: 321 MNLFLQQQQNDTQRAAAAAALMLN--EDMHKF-GRSRLERNDFSINGSAGIVNPASRQIY 377
++ LQQQQ RAAAAA+LML ++ HKF GR RL+R DF A ++NP SRQIY
Sbjct: 317 LSFLLQQQQQQHDRAAAAASLMLGGGDEAHKFMGRPRLDRADF-----ANMMNPGSRQIY 371
Query: 378 LTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFV 437
LTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+
Sbjct: 372 LTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFI 431
Query: 438 CDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT-GLDSRDPFDL-QLGARMFYN 495
CDARVLVKPYKEKGKVPDK R + ++G+FS C TPT GLD PFDL QLG RM +
Sbjct: 432 CDARVLVKPYKEKGKVPDKCR-HALKPQQGDFSGCTTPTGGLDGGYPFDLHQLGGRMLQH 490
Query: 496 NT--QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSP 549
++ ++L RRK+EEQ QQA+ELQSRRLMGLQLLD+K A + SP+P+P
Sbjct: 491 SSSANELLLRRKLEEQ---QQAIELQSRRLMGLQLLDLKA---RAAAAAASPLPTP 540
>gi|218192753|gb|EEC75180.1| hypothetical protein OsI_11407 [Oryza sativa Indica Group]
Length = 677
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 287/590 (48%), Positives = 368/590 (62%), Gaps = 95/590 (16%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV-----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSWSTA--- 111
L +A++S SP+ P++ SPFL +RQNS PS +SW+ A
Sbjct: 61 LALLPPPQAASS--SPTVPAAHSPFLLSRQNSGR-----------CPAPSPSSWAQAQPF 107
Query: 112 -----VTDLPNPDDLIPQTTTTMN---------SSALPFYGNGTGSGSSDVIDEYQLQDQ 157
+ + D+++ M+ ++A PF+ G + ++D+++LQ+Q
Sbjct: 108 SRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDA----LLDDFELQEQ 163
Query: 158 LSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV 217
L+FL++ + + N L + S P + + + W G HRRS SV+++
Sbjct: 164 LAFLHDGAGGV-NPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNEL 222
Query: 218 -LGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK 276
LG G GW+PCLY+ARG+CKNGS+CRFVHGG + +
Sbjct: 223 CLG------GDGFGWKPCLYYARGFCKNGSTCRFVHGG------------LSDDAAMDAA 264
Query: 277 MEPIDHCHE-LLRSKSAAAAQVQQQRLA-AASQLMGSSSFPYSPKSMNLFLQQQ------ 328
C + LLRSKS QRL AA + S P SP + + L
Sbjct: 265 TAEQQQCQDFLLRSKS--------QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQ 316
Query: 329 QNDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
ND QRAAAAA ++ D HKF GR RL+R DF A ++NP SRQIYLTFPADSTF
Sbjct: 317 HNDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTF 371
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
REEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKP
Sbjct: 372 REEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKP 431
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWR 503
YKEKGKVPDKYRKQQQ G+F C +PTGLD+RDPFD QLGARM N+ +++ R
Sbjct: 432 YKEKGKVPDKYRKQQQ----GDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLR 486
Query: 504 RK---MEEQADLQQALELQSRRLMGLQLLDVKKHHH-HRALSTGSPIPSP 549
RK ++ A+LQQA++L SRRL+GLQLLD+K H A +T +P+P
Sbjct: 487 RKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTP 536
>gi|242051314|ref|XP_002463401.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
gi|241926778|gb|EER99922.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
Length = 702
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 309/607 (50%), Positives = 374/607 (61%), Gaps = 119/607 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L----VRASNSPNSPSTPSSPSPFL-ARQNSS-----------------------SSRLL 92
L A S T ++ SPFL +RQNS
Sbjct: 61 LGLLPPPAPGSGPGTPTSAAHSPFLLSRQNSGRCGAGAGTAPSPLSVSSPSSWAPPPVFS 120
Query: 93 GSNNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEY 152
SN++ I +G A+T D + P N+ PF+ G ++DE
Sbjct: 121 RSNSV----ISNGAVAEEALTAAVGDDLMSPAAGG--NAPPSPFFAAG-----DPLLDEL 169
Query: 153 QLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSV----- 207
QLQ+QL+FLN+++ +Q + + + S GA D+ F Y G G +
Sbjct: 170 QLQEQLAFLNDAAAG----HQLPLFDAASECRSP---GAGDATGFFPYGGLGWANGGGPG 222
Query: 208 HRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGA 267
HRRS SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG D A
Sbjct: 223 HRRSSSVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLP--------DDA 270
Query: 268 ATLVGSPSKMEPIDH-CHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------- 318
L G+ ++ C + LLRSKS QRLAAA+ FPYSP
Sbjct: 271 TALAGAKMDTATLEQQCQDILLRSKS--------QRLAAAA-------FPYSPTGSLPGS 315
Query: 319 -----KSMNLFLQQQQNDTQR--AAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIV 369
K ++L LQQQQN+ +R AAAAAALML +D HKF GR RL+R D A ++
Sbjct: 316 PSAATKCLSLLLQQQQNENRRHAAAAAAALMLGGDDAHKFLGRPRLDRADL-----ASMM 370
Query: 370 NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIIL 429
NP SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 371 NPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLIL 430
Query: 430 AKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QL 488
AKGNPHF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER +FS GLD+RD FDL QL
Sbjct: 431 AKGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERVDFS-----NGLDARDHFDLHQL 485
Query: 489 GARMFY--NNTQDMLWRRK----MEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALST 542
GARM ++ +ML RRK ++ A+LQQA+ELQSRRLMGLQLLD+K S+
Sbjct: 486 GARMLQHSHSANEMLLRRKLEEQQQQAAELQQAMELQSRRLMGLQLLDLKTR------SS 539
Query: 543 GSPIPSP 549
SPI P
Sbjct: 540 PSPIGMP 546
>gi|297734950|emb|CBI17184.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/371 (63%), Positives = 282/371 (76%), Gaps = 29/371 (7%)
Query: 205 SSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGS 264
+++HRRS S +D SDD SG GW+PCLYFARG+CKNG++C+F+HGG S +
Sbjct: 120 AALHRRSYSFNDAC-YGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSA 178
Query: 265 DGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLF 324
+A +VGSP K++ + E+LRS QQQRLA ASQLM +FPY+ K MN F
Sbjct: 179 A-SAAIVGSPGKLDGFEQ--EMLRS--------QQQRLAVASQLMAGLNFPYN-KCMNFF 226
Query: 325 LQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADS 384
+QQ N+TQR+AAAA LM+ E++HKFGR R ERNDFS G G VNP SRQIYLTFPADS
Sbjct: 227 MQQ--NETQRSAAAA-LMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADS 283
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
TFREEDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHFVCD+RVLV
Sbjct: 284 TFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLV 343
Query: 445 KPYKEKGKVPDK-------YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNT 497
KPYKEKGKVP+K ++QQQQ+ERGE+S C +P+G+D R+P+DL LGARMFY NT
Sbjct: 344 KPYKEKGKVPEKKQQHQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFY-NT 402
Query: 498 QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVK-----KHHHHRALSTGSPIPSPTHS 552
Q+ML RRK+EEQADLQQA+ELQ RRLM LQLLD+K HH LS G+P+ SP+ S
Sbjct: 403 QEMLLRRKLEEQADLQQAIELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQS 462
Query: 553 PNIFHQNLVFP 563
+Q+L P
Sbjct: 463 SIHNNQSLGLP 473
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 94/136 (69%), Gaps = 16/136 (11%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
MD YEATRIVFSRIQ LDPENASKIMG +LL+QDHGEKEMIRLAFGPE L+H++ILKA+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 ELVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSW-STAVTDLPNP 118
+L SN+P++P++PS +P S +RL +N P +SW + +DL +P
Sbjct: 61 QLGILSNTPSTPTSPSPFNPI-----SKPTRLPTNNGFNP-----SSSWPVSGFSDLRSP 110
Query: 119 DDLIPQTTTTMNSSAL 134
+ TT ++ +AL
Sbjct: 111 NS----TTAQLSYAAL 122
>gi|255544930|ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 686
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/594 (45%), Positives = 367/594 (61%), Gaps = 83/594 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT I+ S+I+++DPENASKIMG +L+QD E +++ LAFG E L+H+VI+KA+
Sbjct: 1 MDTYEATNILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTH 60
Query: 61 LVRASNSPNSPSTPSSPSPF--LARQNSSSSRLLGSNNLPPLT---------IPSGTSWS 109
L ++N+ +PS+P PSP ++R ++ S ++ P PS SW
Sbjct: 61 LGLSTNTLTTPSSPL-PSPLNPISRPANNHSPFSTQSSSSPRVGTPFVDFAKSPSPHSWP 119
Query: 110 -----------TAVTDLPNP---DDLIPQTTTTMNSSALPFYGNGTGS---GSSDVIDEY 152
T+++ +P D I + + SA GNG+G S+D+++EY
Sbjct: 120 ASGLANNNNGITSISPKSSPFLSYDNIRSGSALVPPSATANGGNGSGDVSRNSTDLLNEY 179
Query: 153 QLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSC 212
QL + SFL++ L +K +D P + L N + +HRR
Sbjct: 180 QLDEYFSFLDD----LPSKGEDFGDP-RAQLGGFSMNNVDNH------------IHRRRF 222
Query: 213 SVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVG 272
S SD ++D G+G+RPCLYFARG+CKNG +C+FVHGG G+G +G G
Sbjct: 223 SESDAC-FGTEDGGFGIGYRPCLYFARGFCKNGENCKFVHGG-FGAGENIGDVSGGGGGG 280
Query: 273 S------PSKMEPI--DHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLF 324
P +ME + +++R K+A QQQRLA K MN F
Sbjct: 281 GGLLVGSPREMEGLYLQQQEDMMRMKAAQ----QQQRLAYN-------------KYMN-F 322
Query: 325 LQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADS 384
L QQ++D+QR A+ +M+ ++ HK G+ R ERNDF N ASRQIYLTFPADS
Sbjct: 323 LLQQESDSQRIGPAS-VMMGDEFHKIGQFRPERNDFLAMAMEEKANSASRQIYLTFPADS 381
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
TF++EDVSNYFS +GPVQDVRIPYQQKRMFGFVTFV+ +TVK+IL++GNPHF+CD+RVLV
Sbjct: 382 TFKDEDVSNYFSHFGPVQDVRIPYQQKRMFGFVTFVHSDTVKLILSRGNPHFICDSRVLV 441
Query: 445 KPYKEKGKVPDK--YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLW 502
KPYKEKGKV +K + QQQ ++RG FSPC +P+GLD R+ +DL LGARM Y N+Q+M+
Sbjct: 442 KPYKEKGKVTNKRQQQLQQQLMDRGNFSPCSSPSGLDPRELYDLHLGARMLY-NSQEMML 500
Query: 503 RRKMEEQADLQQALELQSRRLMGLQLLDVK---KHHHHRALSTGSPIPSPTHSP 553
RRK+E+QA+LQQA+ELQ RRL+ LQL D++ HHH R+LS G+PI TH+P
Sbjct: 501 RRKLEQQAELQQAIELQGRRLINLQLPDLRGDYAHHHQRSLSAGAPI--STHAP 552
>gi|414888142|tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 661
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 296/593 (49%), Positives = 354/593 (59%), Gaps = 126/593 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L-VRASNSPNSPSTPSSP---SPFL-ARQNSS---------------------SSRLLGS 94
L + S P +P++ ++ SPFL +RQNS +
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQL 154
N++ + +G DL +P N+ PF+ G ++DE QL
Sbjct: 121 NSV----VSNGAPAEALAADLMSP-------AAAGNAPPSPFFAAG-----EPLLDELQL 164
Query: 155 QDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY----WGGGSSVHRR 210
Q+QL+FL++++ G LF D S G+ D+ F Y W G HRR
Sbjct: 165 QEQLAFLSDAAA--GGHQLPLF-----DASECRSPGSGDAAGFFPYGALGWANGGPGHRR 217
Query: 211 SCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATL 270
S SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG T AT
Sbjct: 218 SSSVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLTDD---------ATA 264
Query: 271 VGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP----------- 318
+ +E C + LLRSKS QRLAA FPYSP
Sbjct: 265 KMDTATLE--QQCQDILLRSKS--------QRLAA---------FPYSPTGSVPGSPSAA 305
Query: 319 -KSMNLFLQQQQND-----TQRAAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIVN 370
K ++L L QQQ AAAAAALML +D HKF GR RL+R D A +VN
Sbjct: 306 TKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADL-----ASLVN 360
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILA 430
P SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILA
Sbjct: 361 PGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 420
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE--FSPCGTPTGLDSRD-PFDL- 486
KGNPHF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER FS GLD R+ DL
Sbjct: 421 KGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS-----NGLDGRENHLDLH 475
Query: 487 QLGARMFY--NNTQDMLWRRK-----MEEQADLQQALELQSRRLMGLQLLDVK 532
QLGARM ++ +ML RRK A+LQQA+ELQSRRLM LQLLD+K
Sbjct: 476 QLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRLQLLDLK 528
>gi|224054504|ref|XP_002298293.1| predicted protein [Populus trichocarpa]
gi|222845551|gb|EEE83098.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/590 (44%), Positives = 351/590 (59%), Gaps = 79/590 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +E T I+ +++++LDPENAS+IMG +L+QD EK+++RLAFGPE L+ +V+ KA+
Sbjct: 1 MDTHEITNILLTKLKSLDPENASRIMGFILIQDPTEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 61 LVRASNSPNS---------------PSTPSSPSPFLARQNSSSSRLLGSNNLPPLTI-PS 104
L ++N+ ++ P ++P P SS R+ + + + PS
Sbjct: 61 LGLSTNTLSTPSTPSSPSPLNPIARPCNNTNPFP------QSSPRITNNGSFLDFSKNPS 114
Query: 105 GTSWSTAVTDLPN-----------PDDLIPQTTTTMNSSALPFY----GNGTG---SGSS 146
WS V LPN + S +P + GNG G + S+
Sbjct: 115 PNPWS--VHGLPNNSDSKSSISPKSSPFLSYDNIRSGSVLVPPFSRNGGNGGGVCSNNSA 172
Query: 147 DVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSS 206
D + EYQ D LSF ++ S +KN+D F ++ + S G
Sbjct: 173 DFLGEYQSDDHLSFFDDPS----SKNED-FMDQRVQMGGY------------SVANGDVH 215
Query: 207 VHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDG 266
+HRR S SD S ++D GL +R CLYFARG+CKNG SC+F HG E N+ +
Sbjct: 216 LHRRRFSESDAC-SGAEDGGFGLRYRQCLYFARGFCKNGESCKFGHGDE----NMAEVNV 270
Query: 267 AATLVGSPSKMEPI--DHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLF 324
LV SP +ME + E+++ K+ Q + ++ A Q Y+ K MN F
Sbjct: 271 GGALVSSPREMEELYLQQQEEMMKRKAVQQQQEEMMKMKAVQQQQ-QQRLAYN-KHMN-F 327
Query: 325 LQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADS 384
L QQN+ +R AA M+ ++ +KFGR+R RNDF G A N ASRQIYLTFPADS
Sbjct: 328 LLLQQNEAERFGAA---MMGDEFYKFGRTRGGRNDFLAMGMAEKANSASRQIYLTFPADS 384
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
+F++EDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPH++C++RVLV
Sbjct: 385 SFKDEDVSNYFSSFGPVQDVRIPYQQKRMFGFVTFVYPETVKEILAKGNPHYICESRVLV 444
Query: 445 KPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRR 504
KPYKEKGKV + + QQ +ERG FSP +P+G D R+ DL LGARM Y NT +M+ RR
Sbjct: 445 KPYKEKGKVAN---RTQQLLERGGFSPASSPSGFDPRELCDLHLGARMLY-NTPEMMLRR 500
Query: 505 KMEEQADLQQALELQSRRLMGLQLLDVK---KHHHHRALSTGSPIPSPTH 551
K+EEQA+LQQA+ELQ RRL+ LQL D++ HHH +LS G+PI PTH
Sbjct: 501 KLEEQAELQQAIELQGRRLINLQLPDLRGDHAHHHQHSLSVGAPISLPTH 550
>gi|414888141|tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 652
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 296/593 (49%), Positives = 354/593 (59%), Gaps = 126/593 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L-VRASNSPNSPSTPSSP---SPFL-ARQNSS---------------------SSRLLGS 94
L + S P +P++ ++ SPFL +RQNS +
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQL 154
N++ + +G DL +P N+ PF+ G ++DE QL
Sbjct: 121 NSV----VSNGAPAEALAADLMSP-------AAAGNAPPSPFFAAG-----EPLLDELQL 164
Query: 155 QDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY----WGGGSSVHRR 210
Q+QL+FL++++ G LF D S G+ D+ F Y W G HRR
Sbjct: 165 QEQLAFLSDAAA--GGHQLPLF-----DASECRSPGSGDAAGFFPYGALGWANGGPGHRR 217
Query: 211 SCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATL 270
S SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG T AT
Sbjct: 218 SSSVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLTDD---------ATA 264
Query: 271 VGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP----------- 318
+ +E C + LLRSKS QRLAA FPYSP
Sbjct: 265 KMDTATLE--QQCQDILLRSKS--------QRLAA---------FPYSPTGSVPGSPSAA 305
Query: 319 -KSMNLFLQQQQND-----TQRAAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIVN 370
K ++L L QQQ AAAAAALML +D HKF GR RL+R D A +VN
Sbjct: 306 TKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADL-----ASLVN 360
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILA 430
P SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILA
Sbjct: 361 PGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 420
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE--FSPCGTPTGLDSRD-PFDL- 486
KGNPHF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER FS GLD R+ DL
Sbjct: 421 KGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS-----NGLDGRENHLDLH 475
Query: 487 QLGARMFY--NNTQDMLWRRK-----MEEQADLQQALELQSRRLMGLQLLDVK 532
QLGARM ++ +ML RRK A+LQQA+ELQSRRLM LQLLD+K
Sbjct: 476 QLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRLQLLDLK 528
>gi|356497343|ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 646
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/569 (45%), Positives = 346/569 (60%), Gaps = 76/569 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M EAT +V S+I+N DPENASKIMG LL+ + E E+IR+A P+ ++ +++L+ +
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRVACSPDTVLQTLVLRVKSH 59
Query: 61 L-------------VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTS 107
L + +P + T +S +PF SR +N P+ S
Sbjct: 60 LGLTLSTPSSPSQFPPSPLNPIARLTGTSSNPF--------SRGGPTNGFDFTRNPASPS 111
Query: 108 WSTAVTDLPNPDDLIPQTTTTM---NSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNES 164
+ + PN + + P++T + N AL NG D +DE Q+ + FLN+S
Sbjct: 112 SHSHAWNFPNNNPISPKSTPLLSYDNIRALSPRVNG----DCDFVDEQQVNEYFPFLNDS 167
Query: 165 SQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDD 224
S KN+DL P +++L N + G S +HRRS S SDV G D+
Sbjct: 168 S-----KNEDLVDP-RLELGVGAQN----------WHSGDSHLHRRSYSASDV-GFGCDE 210
Query: 225 LNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCH 284
GLG++PCLYFARG+CKNG++C+F+HG T D +VGSPSK+E ++
Sbjct: 211 AAPGLGYKPCLYFARGFCKNGTNCKFLHGAFT--------DSLDAIVGSPSKLEGMEQRE 262
Query: 285 ELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLN 344
E +R K+ Q QR+A+ + Y FL Q+ +QRAAAA M+
Sbjct: 263 EFVRFKAP-----QLQRIASGPSAAAREKY-YE------FLMQE---SQRAAAA--FMMG 305
Query: 345 EDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDV 404
E+ + FG R ERNDF S N ASRQIYLTFPA+STF++EDVS YFS +GPVQDV
Sbjct: 306 EEFYNFGWDRPERNDFLAAISGEKPNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDV 365
Query: 405 RIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-YRKQQQQ 463
RIPYQQKRMFGFVTFVYPETV++IL+KGNPHF+CD+RVLVKPYKEKGKVPDK ++QQQQ
Sbjct: 366 RIPYQQKRMFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQQQQQQ 425
Query: 464 VERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRL 523
+ERG+ SPC +P+G S++P+D LGARM Y N D+L RRK+EEQA+LQQ LELQ RRL
Sbjct: 426 LERGDLSPCLSPSGFGSKEPYDFHLGARMLY-NPHDILLRRKIEEQAELQQVLELQERRL 484
Query: 524 MGLQLLDVKK---HHHHRALSTGSPIPSP 549
LQL D K HHH R+LS G+P+ P
Sbjct: 485 KNLQLPDFKNNPIHHHQRSLSVGTPLVLP 513
>gi|222624859|gb|EEE58991.1| hypothetical protein OsJ_10701 [Oryza sativa Japonica Group]
Length = 677
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 287/589 (48%), Positives = 358/589 (60%), Gaps = 93/589 (15%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QDHG+KEMIRLAFGPEAL+HSV+ +ARKE
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LV-----RASNSPNSPSTPSSPSPFL-ARQNSSSSRLLGSNNLPPLTIPSGTSW------ 108
L +A++S SP+ P++ SPFL +RQN S P PS +SW
Sbjct: 61 LALLPPPQAASS--SPTVPAAHSPFLLSRQN--------SGRCP---APSPSSWAQAQPF 107
Query: 109 --STAVTDLPNPDDLIPQTTTTMN---------SSALPFYGNGTGSGSSDVIDEYQLQDQ 157
S ++ + D+++ M+ ++A PF+ G D +
Sbjct: 108 SRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRG-----GDALLTTSSCRS 162
Query: 158 LSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDV 217
S + N L + S P + + + W G HRRS SV+++
Sbjct: 163 SSRSCTTEPGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNEL 222
Query: 218 -LGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK 276
LG G GW+PCLY+ARG+CKNGS+CRFVHGG SD AA + +
Sbjct: 223 CLG------GDGFGWKPCLYYARGFCKNGSTCRFVHGGL--------SDDAAMDATTAEQ 268
Query: 277 MEPIDHCHELLRSKSAAAAQVQQQRLA-AASQLMGSSSFPYSPKSMNLFLQQQ------Q 329
+ D LLRSKS QRL AA + S P SP + + L
Sbjct: 269 QQCQDF---LLRSKS--------QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQH 317
Query: 330 NDTQRAAAAAALMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFR 387
ND QRAAAAA ++ D HKF GR RL+R DF A ++NP SRQIYLTFPADSTFR
Sbjct: 318 NDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFR 372
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPY 447
EEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPY
Sbjct: 373 EEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPY 432
Query: 448 KEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWRR 504
KEKGKVPDKYRKQQQ G+F C +PTGLD+RDPFD QLGARM N+ +++ RR
Sbjct: 433 KEKGKVPDKYRKQQQ----GDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRR 487
Query: 505 K---MEEQADLQQALELQSRRLMGLQLLDVKKHHH-HRALSTGSPIPSP 549
K ++ A+LQQA++L SRRL+GLQLLD+K H A +T +P+P
Sbjct: 488 KLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTP 536
>gi|357481341|ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355512291|gb|AES93914.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 685
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/586 (45%), Positives = 346/586 (59%), Gaps = 75/586 (12%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT +V ++++N DPENASKIMG LL+ + E E++RLA P+ ++H++ ++ +
Sbjct: 1 MGSYEATNVVLAKVKNFDPENASKIMGFLLM-NLEEYELVRLACCPDHVLHNLAIRVKTH 59
Query: 61 LVRASNSPNSPSTPSSPSPF--LARQNSSSSRLL------GSN----NLPPLTIPSGTSW 108
L + STPSSPSP + R SSS+ GSN N P + PSG W
Sbjct: 60 LGM------NLSTPSSPSPLNPIGRITSSSNNPFSKSSPRGSNGFDFNRNP-SSPSGNVW 112
Query: 109 STAVTDLP-NPDDLIPQTTTTMNSSALPF------------------YGNGTGSGSSDVI 149
S P NP + P+ M+ + + +G D +
Sbjct: 113 SQP--SFPKNP--ISPKFNPLMSYENIQGGVGVVGGGGGSGAGGSCAFSPRVNNGDYDFV 168
Query: 150 DEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHR 209
DE QL + FLNESS N D ++++ N + + G ++H+
Sbjct: 169 DEQQLNECFPFLNESS------NGDDLVDPRLEMGVGGQNWISGNN------GDAHNIHK 216
Query: 210 RSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAAT 269
RS S +D S ++ G G++PCLYFARG+CKNGS+C+FVHG + +
Sbjct: 217 RSFSANDA-SFSVEESGLGFGFKPCLYFARGFCKNGSNCKFVHGDSIDAN-------SGA 268
Query: 270 LVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQ 329
+VGSP K E ++ E +R K+A Q QR+ AASQL + P S L QQ
Sbjct: 269 VVGSP-KFEGLEQHEEFMRFKAAQ----QHQRMVAASQLAAGGTSPVSYDKYIDLLMQQH 323
Query: 330 NDTQRAAAAAALMLNEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFRE 388
+D QRA AAAA + E+ GR R ERN+F S N ASRQIYLTFPA+STF++
Sbjct: 324 SDNQRAVAAAAFAMGEEYFNITGRGRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKD 383
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
EDVS YFS +GPVQDVRIPYQQKRMFGFVTFV+PETV++IL+KGNPHF+CD+RVLVKPYK
Sbjct: 384 EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYK 443
Query: 449 EKGKVPDK-YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKME 507
EKGKVPDK ++ QQQQ ERG+FSPC +P+ DS++PFD G RM Y N D+L RRK+E
Sbjct: 444 EKGKVPDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLY-NPHDILLRRKIE 502
Query: 508 EQ-ADLQQALELQSRRLMGLQLLDVKK---HHHHRALSTGSPIPSP 549
EQ AD QQ LELQ RRL LQL D K HHH R+LS G+P+ P
Sbjct: 503 EQAADFQQVLELQERRLKSLQLPDFKNNPIHHHQRSLSVGAPLVFP 548
>gi|224054502|ref|XP_002298292.1| predicted protein [Populus trichocarpa]
gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 255/526 (48%), Positives = 314/526 (59%), Gaps = 102/526 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEA +VFSRIQNL+PENASKIMG LLLQD+GEKEMIR AFGPE L+H++IL A+ +
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L SN +S SPF+ S PL+IPS + D+ NP
Sbjct: 61 LGFLSNK-------TSSSPFIPSSRPS-----------PLSIPSSRITNNNGFDITNPSS 102
Query: 121 LIPQTTT----TMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLF 176
P T + T NS++ Y + SS Q +S N
Sbjct: 103 --PSTNSWHFSTPNSTSPLSYASVVNGASSINASSTPFQPTVSLSNA------------- 147
Query: 177 YPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLY 236
+P + ++SP Y GS H+RS SV D S+D NSG GW+PCLY
Sbjct: 148 FPYSNNNTTSPTK----------YGDNGS--HKRSFSVPDTC-VGSEDSNSGFGWKPCLY 194
Query: 237 FARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQ 296
F+RG+CKNGS CRFVHG S A +VGSP ++ + C ++LRSK+AA +
Sbjct: 195 FSRGFCKNGSGCRFVHGD---------SADTAAIVGSPGELYEFEQCLQILRSKAAAQQK 245
Query: 297 VQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLE 356
AAASQ M ++F KS++ FL QQQND+Q
Sbjct: 246 KL----AAASQFMAGANFLSHNKSLD-FLHQQQNDSQ----------------------- 277
Query: 357 RNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 416
+P+SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF
Sbjct: 278 -------------SPSSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 324
Query: 417 VTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT 476
VTFV+ ETV++ILAKGNPHFVCD+RVLVKPYKEKGKVPDK QQQQ+ER E+S C +P+
Sbjct: 325 VTFVFAETVRLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHHQQQQIEREEYSACPSPS 384
Query: 477 GLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRR 522
++SR+ FDL +GARM Y NTQ+ML RK++E+AD QQA+E Q RR
Sbjct: 385 RINSREAFDLHIGARMLY-NTQEML-SRKLKEEADFQQAIESQGRR 428
>gi|449464832|ref|XP_004150133.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Cucumis sativus]
Length = 482
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/351 (61%), Positives = 255/351 (72%), Gaps = 41/351 (11%)
Query: 214 VSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGS 273
S V G+ +++ GLGWRPCLY+A+G+CKNGS CRF H G+ G
Sbjct: 39 ASPVGGNWAEEGGLGLGWRPCLYYAKGFCKNGSGCRFFHSGDGG---------------- 82
Query: 274 PSKMEPIDHCHE--LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMN-LFLQQQQN 330
+ E ++ C++ LLRS S QQR+ S + FPYSP + + L LQQQQN
Sbjct: 83 --RAEIVEECNDVVLLRSNSGV-----QQRMGVGSV---NGFFPYSPTTASELLLQQQQN 132
Query: 331 DTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREED 390
+ +RA A L + E+ + GR RLER+DFS G+ NPA+RQIYLTFPA+S F+EED
Sbjct: 133 EMRRAVAG--LSMGEESNNSGRFRLERSDFS---GGGMGNPAARQIYLTFPAESCFKEED 187
Query: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
VS YFSIYGPVQDVRIPYQQKRMFGFVTFVY ETVK+ILAKGNPHFVCD+RVLVKPYKEK
Sbjct: 188 VSKYFSIYGPVQDVRIPYQQKRMFGFVTFVYAETVKLILAKGNPHFVCDSRVLVKPYKEK 247
Query: 451 GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQA 510
GKVPDK+RK QQQ+ERG+ SPCGTPTGLDSRD DL GARM+Y N+QDMLWRRK+EEQA
Sbjct: 248 GKVPDKFRK-QQQMERGDLSPCGTPTGLDSRDLHDLHHGARMYY-NSQDMLWRRKLEEQA 305
Query: 511 DLQQALELQSRRLMGLQLLDVKK-HHHHRALSTGSPIPSPTHSPNIFHQNL 560
DLQQALELQ+ R+M LQL DV+K HHH LST SPIP SPN F+Q L
Sbjct: 306 DLQQALELQALRVMSLQLADVRKPLHHHTPLSTCSPIP----SPNPFNQTL 352
>gi|356540386|ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 658
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/575 (43%), Positives = 335/575 (58%), Gaps = 75/575 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M EAT +V S+I+N DPENASKIMG LL+ + E E+IRLA P+ ++H+++L+ +
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRLACSPDPVLHTLVLRVKNH 59
Query: 61 L---------------VRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSG 105
L + +P + T S +PF +R ++ + N P
Sbjct: 60 LSGLTLSSTTPSSPSLPPSPLNPTARLTAISSNPF-SRGGGPTNGFDFTRNHPSSPSSHS 118
Query: 106 TSWSTAVTDLPNPDDLIPQTTTTMNSSAL-PFYGNGTGSGSSDVIDEYQLQDQLSFLNES 164
+W + PN + + P++T + + D +DE Q+ + FLN+S
Sbjct: 119 HAW-----NFPNNNPISPKSTPLFSYDNIRALSPRVVNDDCGDFVDEQQVNEYFPFLNDS 173
Query: 165 SQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSS--VHRRSCSVSDVLGSSS 222
S KN+DL P +++ N W G S HRRS S SDV G
Sbjct: 174 S-----KNEDLVDP-RLEFGVGAQN-----------WHSGDSHLQHRRSYSASDV-GFGC 215
Query: 223 DDLNS---GLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK-ME 278
D+ + GLG++PCLYFARG+CKNG++C+F+HG T D +VGSPSK +E
Sbjct: 216 DEAAAAAPGLGYKPCLYFARGFCKNGTNCKFLHGAFT--------DSLDAIVGSPSKQLE 267
Query: 279 PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAA 338
++ E +R A Q QR+A+ K +Q+ Q AA
Sbjct: 268 GMEQREEFVRFNKAP----QLQRIASGPSAAARE------KYFEFLIQESQR-----LAA 312
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
AA ++ E+ + FG + ERNDF S+ N AS+QIYLTFPA+STF++EDVS YFS +
Sbjct: 313 AAFIMGEEFYNFGWDKPERNDFLAAISSEKSNSASQQIYLTFPAESTFKDEDVSEYFSKF 372
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK-Y 457
GPVQDVRIPYQQKRMFGFVTFVYPETV++IL+KGNPHF+CD+RVLVKPYKEKGKVPDK
Sbjct: 373 GPVQDVRIPYQQKRMFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQ 432
Query: 458 RKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALE 517
+ QQQQ+ERG+ SPC +P+G S++P+D LGARM Y N D+L RRK+EEQA+LQQ E
Sbjct: 433 QHQQQQLERGDLSPCLSPSGFGSKEPYDFHLGARMLY-NPHDVLLRRKIEEQAELQQVRE 491
Query: 518 LQSRRLMGLQLLDVKK---HHHHRALSTGSPIPSP 549
LQ RRL LQL D K HHH R+LS G P+ P
Sbjct: 492 LQERRLKNLQLPDFKNNPIHHHQRSLSVGIPLALP 526
>gi|414888140|tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 486
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 263/530 (49%), Positives = 315/530 (59%), Gaps = 109/530 (20%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L-VRASNSPNSPSTPSSP---SPFL-ARQNSSSSRLLGSNNLPPL--------------- 100
L + S P +P++ ++ SPFL +RQNS + + +
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 101 --TIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQL 158
+ +G DL +P N+ PF+ G ++DE QLQ+QL
Sbjct: 121 NSVVSNGAPAEALAADLMSP-------AAAGNAPPSPFFAAG-----EPLLDELQLQEQL 168
Query: 159 SFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY----WGGGSSVHRRSCSV 214
+FL++++ G LF D S G+ D+ F Y W G HRRS SV
Sbjct: 169 AFLSDAAA--GGHQLPLF-----DASECRSPGSGDAAGFFPYGALGWANGGPGHRRSSSV 221
Query: 215 SDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSP 274
S++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG T AT
Sbjct: 222 SELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLTDD---------ATAKMDT 268
Query: 275 SKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------------KSM 321
+ +E C + LLRSKS QRLAA FPYSP K +
Sbjct: 269 ATLE--QQCQDILLRSKS--------QRLAA---------FPYSPTGSVPGSPSAATKCL 309
Query: 322 NLFLQQQQND-----TQRAAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIVNPASR 374
+L L QQQ AAAAAALML +D HKF GR RL+R D A +VNP SR
Sbjct: 310 SLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADL-----ASLVNPGSR 364
Query: 375 QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNP 434
QIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNP
Sbjct: 365 QIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP 424
Query: 435 HFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE--FSPCGTPTGLDSRD 482
HF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER FS GLD R+
Sbjct: 425 HFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS-----NGLDGRE 469
>gi|414888139|tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 734
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 252/508 (49%), Positives = 303/508 (59%), Gaps = 110/508 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VFSRIQ LDP++A+KIMG LL+QDHGEKEMIRLAFGPEAL+H+V+ KARK+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 L-VRASNSPNSPSTPSSP---SPFL-ARQNSS---------------------SSRLLGS 94
L + S P +P++ ++ SPFL +RQNS +
Sbjct: 61 LGLLPSPGPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPHFSRT 120
Query: 95 NNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQL 154
N++ + +G DL +P N+ PF+ G ++DE QL
Sbjct: 121 NSV----VSNGAPAEALAADLMSP-------AAAGNAPPSPFFAAG-----EPLLDELQL 164
Query: 155 QDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSY----WGGGSSVHRR 210
Q+QL+FL++++ G LF D S G+ D+ F Y W G HRR
Sbjct: 165 QEQLAFLSDAAA--GGHQLPLF-----DASECRSPGSGDAAGFFPYGALGWANGGPGHRR 217
Query: 211 SCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATL 270
S SVS++ +D GLGW+PCLY+ARGYCKNGS+CRFVHGG T AT
Sbjct: 218 SSSVSELCLGGAD----GLGWKPCLYYARGYCKNGSACRFVHGGLTDD---------ATA 264
Query: 271 VGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP----------- 318
+ +E C + LLRSKS QRLAA FPYSP
Sbjct: 265 KMDTATLE--QQCQDILLRSKS--------QRLAA---------FPYSPTGSVPGSPSAA 305
Query: 319 -KSMNLFLQQQQND-----TQRAAAAAALMLN-EDMHKF-GRSRLERNDFSINGSAGIVN 370
K ++L L QQQ AAAAAALML +D HKF GR RL+R D A +VN
Sbjct: 306 TKCLSLLLHQQQQQNENQRVAAAAAAAALMLGGDDAHKFIGRPRLDRADL-----ASLVN 360
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILA 430
P SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILA
Sbjct: 361 PGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILA 420
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYR 458
KGNPHF+CDARVLVKPYKEKGKVPDKYR
Sbjct: 421 KGNPHFICDARVLVKPYKEKGKVPDKYR 448
>gi|414876221|tpg|DAA53352.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 587
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/431 (52%), Positives = 270/431 (62%), Gaps = 70/431 (16%)
Query: 129 MNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPP 188
+N P + G ++D+ QLQ+QL+FLNE N ++ Q ++ S P
Sbjct: 132 VNGDTAPVFPRQAGDA---LLDDLQLQEQLAFLNEGGGNPAHQIQGF---DGVECRSPGP 185
Query: 189 NGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSC 248
A + F W G HRRS SV+++ G W+PCLY+A G+CKNG SC
Sbjct: 186 GDADGMIAFGLGWHNGGPAHRRSSSVNEICLGGGGGDGFG--WKPCLYYASGFCKNGGSC 243
Query: 249 RFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHE-----LLRSKSAAAAQVQQQRLA 303
RFVHGG SD A L G+ KME + L+RSK
Sbjct: 244 RFVHGGL--------SDDAVALAGT--KMEAAADQQQQCQDFLIRSKG------------ 281
Query: 304 AASQLMGSSSFPYSP------------KSMNLFLQQQQNDTQRAAAAAALMLN--EDMHK 349
Q +G + FPYSP K ++ LQQ+Q RAAAAA+LML ++ HK
Sbjct: 282 ---QRLGPAVFPYSPTGSLPGSPSAASKCLSFLLQQRQQH-DRAAAAASLMLGGGDEAHK 337
Query: 350 F-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
F R RL+R DF A ++NP+SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPY
Sbjct: 338 FMARPRLDRADF-----ASLMNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 392
Query: 409 QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE 468
QQKRMFGFVTFVYPETVK+ILAKGNPHF+CD RVLVKPYKEKGKVPDKYRKQQQ G+
Sbjct: 393 QQKRMFGFVTFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGKVPDKYRKQQQ----GD 448
Query: 469 FSPCGTPT-GLDSRDPFDL-QLGARMFY--NNTQDMLWRRKMEEQ---ADLQQALELQSR 521
FS TPT GLD+RDPFDL QLGARM N+ ++L RRK+EEQ A+LQ A+ELQSR
Sbjct: 449 FSGYTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSR 508
Query: 522 RLMGLQLLDVK 532
RLMGLQLLD+K
Sbjct: 509 RLMGLQLLDLK 519
>gi|357121462|ref|XP_003562439.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 699
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 246/462 (53%), Positives = 297/462 (64%), Gaps = 79/462 (17%)
Query: 135 PFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQD---LFYPSQMDLSSSPPNGA 191
PF+G G G S V+DE LQDQL+FL G++ Q LF + S P G
Sbjct: 161 PFFGGG---GDSLVLDELHLQDQLAFLGG-----GDRQQQQLPLFDGGGSECRS--PGG- 209
Query: 192 TDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFV 251
D+ +FP Y G + HRRS SVS++ ++ LGW+PC+Y+ARGYCKNGS+CRFV
Sbjct: 210 -DAGVFP-YGAGWAHGHRRSASVSELCFGGGGGGDA-LGWKPCMYYARGYCKNGSACRFV 266
Query: 252 HGGETGSGNLMGS--DGAATLVGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQL 308
HGG S +L G+ D AA CH+ LLRSKS QRLA
Sbjct: 267 HGGGGFSDDLAGAKMDQAAVE----------QQCHDFLLRSKS--------QRLAGGFPY 308
Query: 309 MGSSSFPYSPKSMN------LFLQQQQNDTQRAAAAAA----LMLNED-MHKF-GRSRLE 356
+ S P SP + + L QQQN++QRAAAAAA LML D HKF GR+RL+
Sbjct: 309 SPTGSLPGSPSAASKCLSLLLQQHQQQNESQRAAAAAAAAAALMLGGDEAHKFMGRARLD 368
Query: 357 RNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 416
R DF A ++NP SRQIYLTFPADSTFREEDVS YF+IYGPV DVRIPYQQKRMFGF
Sbjct: 369 RGDF-----ASMMNPGSRQIYLTFPADSTFREEDVSTYFNIYGPVHDVRIPYQQKRMFGF 423
Query: 417 VTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT 476
VTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPDK+RKQQ ER +F+ C +PT
Sbjct: 424 VTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKFRKQQG--ERMDFASCTSPT 481
Query: 477 GLDSRDPFDLQ-LGARMFY--NNTQDMLWRRK---MEEQADLQQALELQSRRLMGLQLLD 530
GLD+RDPFDL LG+RM N+ +ML RRK ++ A+LQQA+ELQSRRLMGLQLLD
Sbjct: 482 GLDARDPFDLHPLGSRMLQHSNSANEMLLRRKLEEQQQAAELQQAIELQSRRLMGLQLLD 541
Query: 531 VKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHSSSAEP 572
+K S + +P+P +P F P H++ A P
Sbjct: 542 LK--------SRSAALPTPIGNP--------FSPSHTTGATP 567
>gi|414882092|tpg|DAA59223.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 630
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 250/555 (45%), Positives = 313/555 (56%), Gaps = 120/555 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +EAT+ VF R++ LDP+NASKIMGLLL+QD+ +KE+IRLAFGP+ L+H+ + AR +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L SP PSP L L + PP PS T+ S P D
Sbjct: 61 LAAKPASP--------PSPVLGP-------LHQTWGAPPH--PSPTAGSDHQHQAPFAAD 103
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
L AL + +G G+G+ D F+P
Sbjct: 104 L-----------ALGYDFDGAGAGA----------------------------DAFFPDD 124
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
D W + HRRS S+SD +++ G WRPC+YFARG
Sbjct: 125 YDC-----------------WSPAGAAHRRSFSLSDAEATAA--AAGGAAWRPCMYFARG 165
Query: 241 YCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQ 300
+CKNGSSCRF+HG D AA E++ ++ A A +
Sbjct: 166 FCKNGSSCRFLHGFPEDD------DAAAE--------------REMVVMRAKALAAAAAR 205
Query: 301 RLAAASQLMGSSSFPYSP---KSMNL-FL---QQQQNDTQRAAAAAALML--NEDMHKFG 351
+ +S+FP+SP K +NL FL QQQN+ QRAAAAAA++L +DMH
Sbjct: 206 PQQQQQLM--ASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQGGDDMH--- 260
Query: 352 RSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 411
SR ++ + +PA+RQIYLTFPADSTF EEDVSNYFS+YGPVQDVRIPYQQK
Sbjct: 261 -SRFPVRSPRMDRGELMSSPAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQK 319
Query: 412 RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSP 471
RMFGFVTFVY ETVKIIL+KGNPHFVCDARVLVKPYKEKGKVPD++RK Q G+F+
Sbjct: 320 RMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHP-HHGDFAG 378
Query: 472 CGTPTG-LDSRDPFDL---QLGARMFYNNT--QDMLWRRK---MEEQADLQQALELQSRR 522
C +PTG LDSRDPFDL Q+G RM Y N + RRK ++ A+LQQA+EL+ RR
Sbjct: 379 CTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQQAIELEGRR 438
Query: 523 LMGLQLLDVKKHHHH 537
MGL LLD+K HH
Sbjct: 439 FMGLHLLDLKSRGHH 453
>gi|414882093|tpg|DAA59224.1| TPA: putative RNA-binding zinc finger family protein isoform 1 [Zea
mays]
gi|414882094|tpg|DAA59225.1| TPA: putative RNA-binding zinc finger family protein isoform 2 [Zea
mays]
Length = 629
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 250/555 (45%), Positives = 313/555 (56%), Gaps = 120/555 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +EAT+ VF R++ LDP+NASKIMGLLL+QD+ +KE+IRLAFGP+ L+H+ + AR +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L SP PSP L L + PP PS T+ S P D
Sbjct: 61 LAAKPASP--------PSPVLGP-------LHQTWGAPPH--PSPTAGSDHQHQAPFAAD 103
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
L AL + +G G+G+ D F+P
Sbjct: 104 L-----------ALGYDFDGAGAGA----------------------------DAFFPDD 124
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
D W + HRRS S+SD +++ G WRPC+YFARG
Sbjct: 125 YDC-----------------WSPAGAAHRRSFSLSDAEATAA--AAGGAAWRPCMYFARG 165
Query: 241 YCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQ 300
+CKNGSSCRF+HG D AA E++ ++ A A +
Sbjct: 166 FCKNGSSCRFLHGFPEDD------DAAAE--------------REMVVMRAKALAAAAAR 205
Query: 301 RLAAASQLMGSSSFPYSP---KSMNL-FL---QQQQNDTQRAAAAAALML--NEDMHKFG 351
+ +S+FP+SP K +NL FL QQQN+ QRAAAAAA++L +DMH
Sbjct: 206 PQQQQQLM--ASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQGGDDMH--- 260
Query: 352 RSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 411
SR ++ + +PA+RQIYLTFPADSTF EEDVSNYFS+YGPVQDVRIPYQQK
Sbjct: 261 -SRFPVRSPRMDRGELMSSPAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQK 319
Query: 412 RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSP 471
RMFGFVTFVY ETVKIIL+KGNPHFVCDARVLVKPYKEKGKVPD++RK Q G+F+
Sbjct: 320 RMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHP-HHGDFAG 378
Query: 472 CGTPTG-LDSRDPFDL---QLGARMFYNNT--QDMLWRRK---MEEQADLQQALELQSRR 522
C +PTG LDSRDPFDL Q+G RM Y N + RRK ++ A+LQQA+EL+ RR
Sbjct: 379 CTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQQAIELEGRR 438
Query: 523 LMGLQLLDVKKHHHH 537
MGL LLD+K HH
Sbjct: 439 FMGLHLLDLKSRGHH 453
>gi|212722294|ref|NP_001131248.1| uncharacterized protein LOC100192560 [Zea mays]
gi|195656461|gb|ACG47698.1| nucleic acid binding protein [Zea mays]
Length = 629
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 248/555 (44%), Positives = 311/555 (56%), Gaps = 120/555 (21%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +EAT+ VF R++ LDP+NASKIMGLLL+QD+ +KE+IRLAFGP+ L+H+ + AR +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L SP PSP L L + PP PS T+ S P D
Sbjct: 61 LAAKPASP--------PSPVLGP-------LHQTWGAPPH--PSPTAGSDHQHQAPFAAD 103
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
L AL + +G G+G+ D F+P
Sbjct: 104 L-----------ALGYDFDGAGAGA----------------------------DAFFPDD 124
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
D W + HRRS S+SD +++ G WRPC+YFARG
Sbjct: 125 YDC-----------------WSPAGAAHRRSFSLSDAEATAA--AAGGAAWRPCMYFARG 165
Query: 241 YCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQ 300
+CKNGSSCRF+HG D AA E++ ++ A A +
Sbjct: 166 FCKNGSSCRFLHGFPEDD------DAAAE--------------REMVVMRAKALAAAAAR 205
Query: 301 RLAAASQLMGSSSFPYSP---KSMNL-FL---QQQQNDTQRAAAAAALMLN--EDMHKFG 351
+ +S+FP+SP K +NL FL QQQN+ QRAAAAAA++L +DMH
Sbjct: 206 PQQQQQLM--ASAFPFSPSPPKGVNLNFLLHQHQQQNEPQRAAAAAAMLLQGGDDMH--- 260
Query: 352 RSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 411
SR ++ + +PA+RQIYLTFPADSTF EEDVS YFS+YGPVQDVRIPYQQK
Sbjct: 261 -SRFPVRSPRMDRGELMSSPAARQIYLTFPADSTFSEEDVSIYFSMYGPVQDVRIPYQQK 319
Query: 412 RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSP 471
RMFGFVTFVY ETVKIIL+KGNPHFVCDARVLVKPYKEKGKVPD++RK Q G+F+
Sbjct: 320 RMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHP-HHGDFAG 378
Query: 472 CGTPTG-LDSRDPFDL---QLGARMFYNNT--QDMLWRRK---MEEQADLQQALELQSRR 522
C +PTG LDSRDPFDL Q+G RM Y N + RRK ++ A+LQQA+EL+ RR
Sbjct: 379 CTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQQAIELEGRR 438
Query: 523 LMGLQLLDVKKHHHH 537
M L LLD+K HH
Sbjct: 439 FMVLHLLDLKSRGHH 453
>gi|413924734|gb|AFW64666.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 633
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 203/381 (53%), Positives = 250/381 (65%), Gaps = 65/381 (17%)
Query: 189 NGATDSMLFPSY--W--GGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKN 244
+G D+ Y W G + HRRS S+SD ++S WRPC+Y+ARGYCKN
Sbjct: 114 DGGADAFYADEYDCWSPAGAAGAHRRSFSLSDAEAAAS--------WRPCMYYARGYCKN 165
Query: 245 GSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAA 304
GSSCRF+HG + D AA + ++R+K+ AAA QQ+
Sbjct: 166 GSSCRFLHG--------VPEDDAA------------EREMAVMRAKALAAAPPTQQQ--- 202
Query: 305 ASQLMGSSSFPYSPK------SMNLFLQQQQNDTQRAAAAAALMLNEDMHKFG-RS-RLE 356
QLM +S++P+SP L QQQQ++TQRAAA L+ EDMH+F RS R++
Sbjct: 203 --QLM-ASAYPFSPSPKGGVSLSFLLQQQQQSETQRAAAGM-LLGGEDMHRFPVRSPRMD 258
Query: 357 RNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 416
R D I +PA+RQIYLTFPADSTF EEDVSNYFS++GPVQDVRIPYQQKRMFGF
Sbjct: 259 RGDL-------IGSPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRMFGF 311
Query: 417 VTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTP 475
VTFVY ETVK IL+KGNPHFVCDARVLVKPYKEKGKVPD++RK Q G EF C +P
Sbjct: 312 VTFVYAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHTHHGGAEFVGCASP 371
Query: 476 TG-LDSRDPFDL---QLGARMFYNNT---QDMLWRRKMEEQ--ADLQQALELQSRRLMGL 526
TG LDSRDP+DL Q+G+RM Y N + RRK+EE+ A+LQQA+EL+ RR MGL
Sbjct: 372 TGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEEQAAELQQAIELEGRRFMGL 431
Query: 527 QLLDVKKHHHHRALSTGSPIP 547
QLLD+K HH L +G+P+P
Sbjct: 432 QLLDLKSRGHHH-LGSGAPMP 451
>gi|449525104|ref|XP_004169559.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 349
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/225 (74%), Positives = 187/225 (83%), Gaps = 10/225 (4%)
Query: 337 AAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFS 396
A A L + E+ + GR RLER+DFS G+ NPA+RQIYLTFPA+S F+EEDVS YFS
Sbjct: 4 AVAGLSMGEESNNSGRFRLERSDFS---GGGMGNPAARQIYLTFPAESCFKEEDVSKYFS 60
Query: 397 IYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
IYGPVQDVRIPYQQKRMFGFVTFVY ETVK+ILAKGNPHFVCD+RVLVKPYKEKGKVPDK
Sbjct: 61 IYGPVQDVRIPYQQKRMFGFVTFVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDK 120
Query: 457 YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQAL 516
+RK QQQ+ERG+ SPCGTPTGLDSRD DL GARM+Y N+QDMLWRRK+EEQADLQQAL
Sbjct: 121 FRK-QQQMERGDLSPCGTPTGLDSRDLHDLHHGARMYY-NSQDMLWRRKLEEQADLQQAL 178
Query: 517 ELQSRRLMGLQLLDVKK-HHHHRALSTGSPIPSPTHSPNIFHQNL 560
ELQ+ R+M LQL DV+K HHH LST SPIP SPN F+Q L
Sbjct: 179 ELQALRVMSLQLADVRKPLHHHTPLSTCSPIP----SPNPFNQTL 219
>gi|297811379|ref|XP_002873573.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
gi|297319410|gb|EFH49832.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
Length = 651
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 325/576 (56%), Gaps = 76/576 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +AT ++ ++I++L+P+ A KI+G LLLQD G+++++ LA GPE+++ S+I K +
Sbjct: 1 MDSGDATALLLTKIRSLEPDYAPKIIGYLLLQDFGDRDLMHLARGPESILQSIISKVKSH 60
Query: 61 L-------VRASNSPNSPSTPSSPSPFLARQNSSSSRLLG-----------------SNN 96
L ++ + SP P P R +S S+ + +N+
Sbjct: 61 LGIFSNNSPSSTPTSPSPLNPICRPPINGRGSSHSNGFMDFRRNSPSSPSSTSPWSLNNS 120
Query: 97 LPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQD 156
+ P+ +G + + P P P ++ N + G+ G++D++D+ QL D
Sbjct: 121 MNPI---NGNNPHISPKHTPIPK---PFSSHQSNGVSATDSGSADAGGNADLLDDQQLND 174
Query: 157 QLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSD 216
LSFL++S +K +DL P ++ L S +G T +HRRS S
Sbjct: 175 YLSFLDDSC----SKTEDLVDP-RIPLDYSVDDGET-------------HLHRRSFSAD- 215
Query: 217 VLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK 276
S D G G +PC+YF+RG CKNG SC+F+HGG + + G + SP K
Sbjct: 216 -ASFGSGDDGFGSGCKPCVYFSRGLCKNGESCKFIHGGYPENMDCNG-----IVADSPRK 269
Query: 277 MEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRA 335
ME HE ++R K A QQQRLA SQ++G + K M+ LQQ QR
Sbjct: 270 MENFVRQHEEMMRLKLA----YQQQRLA--SQILGRAPLLPYEKRMDFLLQQH---AQRD 320
Query: 336 AAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYF 395
+E RLER + N SRQIYLTFPADSTF++EDV+ YF
Sbjct: 321 GGLP--FGDERFWSSSPGRLERMELMAMQLGDQSNSVSRQIYLTFPADSTFKDEDVATYF 378
Query: 396 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 455
S++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV D
Sbjct: 379 SLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLD 438
Query: 456 K--YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQL-GARMFYNNTQDMLWRRKMEEQADL 512
K + QQQ+ERG +SPC +P+G+D R+ D L G++M Y + + RRKM EQADL
Sbjct: 439 KKQQQLLQQQIERGNYSPCSSPSGVDPREQSDFHLVGSKMLYERRE--MMRRKM-EQADL 495
Query: 513 QQALELQSRRLMGLQLLDVKK---HHHHRALSTGSP 545
+A+EL+ RR + LQL + K +HHR+ S GSP
Sbjct: 496 LRAIELERRRFINLQLPEFKNSVMQNHHRSFSVGSP 531
>gi|79313317|ref|NP_001030738.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642940|gb|AEE76461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 602
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 239/560 (42%), Positives = 323/560 (57%), Gaps = 82/560 (14%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+F++I+ L+P+ ASKI+G LLLQD G+ +++RLA GPE L+ SV LKA+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLARQNSSSSRLLGS----NNLPPLTIPSGTSWSTAVTD 114
L +SN +S S+P +P P ++S S G+ N L P S++T +
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSP-------SFATPGSL 113
Query: 115 LPNPDDLIP--QTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKN 172
NP+ + Q ++++ +S G+ TG+G D +DE QL + LSFLNESS +KN
Sbjct: 114 GSNPNMISSPFQASSSLFASDGAAAGDSTGNG--DFLDEQQLGNYLSFLNESS----SKN 167
Query: 173 QDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWR 232
D S P G S G + +H+RS S SD S + G G+
Sbjct: 168 ND---------ESLDPFGF-------SADNGDAHLHKRSFSASDACFGSEEPGFGGGGYN 211
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSA 292
RF+HGG G+ S G GSP + E++R K A
Sbjct: 212 ----------------RFLHGG---LGDDFDSPGG---FGSPDYVS--RQQEEIVRMKMA 247
Query: 293 AAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGR 352
Q+QR+AAA L + S K +N L Q+ A + A E+ + FG
Sbjct: 248 -----QRQRMAAAQYLAATGSPMSYEKGLNFLLHQRN-----AHRSGAGQFGEEGYWFGS 297
Query: 353 -SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 411
R ER++F G N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQK
Sbjct: 298 PGRHERDEFM--GMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQK 355
Query: 412 RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK--YRKQQQQVERGEF 469
RMFGFVTF++ ETV+IILA+GNPHF+CD+RVLVKPYKEKG++ +K ++ QQ+ERG F
Sbjct: 356 RMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNF 415
Query: 470 SPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLL 529
SP +P+G+DSRD FD L RMF +NTQ+M+ R+ EQADLQQA+E Q RR + LQL
Sbjct: 416 SPGSSPSGMDSRDLFDSHLAPRMF-SNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLP 472
Query: 530 DVKKH---HHHRALSTGSPI 546
D+ HH R+LS GSP+
Sbjct: 473 DMDSESFLHHQRSLSIGSPV 492
>gi|11994270|dbj|BAB01453.1| unnamed protein product [Arabidopsis thaliana]
Length = 591
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 243/576 (42%), Positives = 332/576 (57%), Gaps = 86/576 (14%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+F++I+ L+P+ ASKI+G LLLQD G+ +++RLA GPE L+ SV LKA+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLARQNSSSSRLLGS----NNLPPLTIPSGTSWSTAVTD 114
L +SN +S S+P +P P ++S S G+ N L P S++T +
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSP-------SFATPGSL 113
Query: 115 LPNPDDLIP--QTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKN 172
NP+ + Q ++++ +S G+ TG+G D +DE QL + LSFLNESS +KN
Sbjct: 114 GSNPNMISSPFQASSSLFASDGAAAGDSTGNG--DFLDEQQLGNYLSFLNESS----SKN 167
Query: 173 QDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWR 232
D S P G S G + +H+RS S SD S + G G+
Sbjct: 168 ND---------ESLDPFGF-------SADNGDAHLHKRSFSASDACFGSEEPGFGGGGYN 211
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSA 292
RF+HGG G+ S G GSP + E++R K A
Sbjct: 212 ----------------RFLHGG---LGDDFDSPGG---FGSPDYVS--RQQEEIVRMKMA 247
Query: 293 AAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGR 352
Q+QR+AAA L + S K +N L Q+ A + A E+ + FG
Sbjct: 248 -----QRQRMAAAQYLAATGSPMSYEKGLNFLLHQRN-----AHRSGAGQFGEEGYWFGS 297
Query: 353 -SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK 411
R ER++F G N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQK
Sbjct: 298 PGRHERDEFM--GMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQK 355
Query: 412 RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK--YRKQQQQVERGEF 469
RMFGFVTF++ ETV+IILA+GNPHF+CD+RVLVKPYKEKG++ +K ++ QQ+ERG F
Sbjct: 356 RMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNF 415
Query: 470 SPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLL 529
SP +P+G+DSRD FD L RMF +NTQ+M+ R+ EQADLQQA+E Q RR + LQL
Sbjct: 416 SPGSSPSGMDSRDLFDSHLAPRMF-SNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLP 472
Query: 530 DVKKH---HHHRALSTGSPIPSPTHSPNIFHQNLVF 562
D+ HH R+LS GSP+ SP + +Q+++F
Sbjct: 473 DMDSESFLHHQRSLSIGSPV---HFSPRV-NQSMLF 504
>gi|297830802|ref|XP_002883283.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329123|gb|EFH59542.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 607
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 236/563 (41%), Positives = 319/563 (56%), Gaps = 84/563 (14%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+F++I+ L+P+ ASKI+G LLLQD G ++++RLA GP+ L+ SV LKA+
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGTRDLMRLALGPDTLLQSVCLKAKSA 60
Query: 61 LVRASNSPNSPSTPSSP--SPFLARQNSSSSRLLGSNNL---------PPLTIPSGTSWS 109
L +SN +S S+P +P P ++S S G+ + P LT P +
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSQSSPGNGFMEFSRNNPLSPSLTTPGSLGSN 120
Query: 110 TAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLG 169
+ P Q ++++ +S G+ TG+G D +DE QL + LSFLNESS
Sbjct: 121 PNMISSPF------QASSSLFASDGGAAGDSTGNG--DFLDEQQLGNYLSFLNESS---- 168
Query: 170 NKNQDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGL 229
+KN D S P G S G + +H+RS S SD S + G
Sbjct: 169 SKNND---------ESLDPFGF-------SADNGDAHLHKRSFSASDACFGSEEPGFGGG 212
Query: 230 GWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRS 289
G+ RF HGG G+ S G GSP + E++R
Sbjct: 213 GYN----------------RFPHGG---LGDDFDSPGG---FGSPDYVS--RQQEEMVRM 248
Query: 290 KSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHK 349
K A Q+QR+AAA L + S K +N L Q+ + R+ A E+ +
Sbjct: 249 KMA-----QRQRMAAAQYLAATGSPMSYEKGLNFLLHQR--NVHRSGAG---QYGEEGYW 298
Query: 350 FGR-SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
FG R ER++F G N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPY
Sbjct: 299 FGSPGRHERDEFM--GMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGTFGPVQDVRIPY 356
Query: 409 QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK--YRKQQQQVER 466
QQKRMFGFVTFV+ ETV+IILA+GNPHF+CD+RVLVKPYKEKG++ +K ++ QQ+ER
Sbjct: 357 QQKRMFGFVTFVHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMER 416
Query: 467 GEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGL 526
G FSP +P+G+DSRD F+ L RMF +NTQ+M+ R+ EQADLQQA+E Q RR + L
Sbjct: 417 GNFSPGSSPSGMDSRDLFESLLSPRMF-SNTQEMMRRKA--EQADLQQAIEFQRRRFLNL 473
Query: 527 QLLDVKKH---HHHRALSTGSPI 546
QL D+ HH R+LS GSP+
Sbjct: 474 QLPDMDSESFLHHQRSLSIGSPV 496
>gi|14586374|emb|CAC42905.1| putative protein [Arabidopsis thaliana]
Length = 574
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 255/415 (61%), Gaps = 47/415 (11%)
Query: 138 GNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLF 197
G+ +G +D++D+ QL D LSFL++S +K +DL PS P + + D
Sbjct: 80 GSADAAGGADLLDDQQLNDCLSFLDDSC----SKTEDLVDPS------IPLDYSVDG--- 126
Query: 198 PSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETG 257
G + +HRRS S S D G G +PC+YF+RG CKNG SC+F+HGG
Sbjct: 127 ----DGETHLHRRSFSCDASFVSGDDGF--GGGCKPCVYFSRGLCKNGESCKFIHGGYPD 180
Query: 258 SGNLMGSDGAATLVGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSS-SFP 315
+ DG + SP KME HE ++R K A QQQRLA SQ++G + P
Sbjct: 181 N-----MDGNGIVADSPRKMENFVRQHEEMMRLKLA----YQQQRLA--SQILGRAPQLP 229
Query: 316 YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQ 375
Y K M+ LQQ QR +E RLER + +++ N ASRQ
Sbjct: 230 YE-KRMDFLLQQH---AQRDGGLP--FGDERFWSSSPGRLERMELAMH-LGDQSNSASRQ 282
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPH 435
IYLTFPADSTF++EDV+ YFS++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPH
Sbjct: 283 IYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPH 342
Query: 436 FVCDARVLVKPYKEKGKVPDK--YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMF 493
F+CD+RVLVKPYKEKGKV DK + QQQ+ERG +SPC +P+G+D R+ D LG++M
Sbjct: 343 FICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKML 402
Query: 494 YNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH---HHHRALSTGSP 545
Y + + RRK+ EQADL +A+EL+ RR + LQL + K +HHR+ S GSP
Sbjct: 403 YERRE--MMRRKI-EQADLLRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSP 454
>gi|240256278|ref|NP_568277.5| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187639|ref|NP_001190296.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187641|ref|NP_001190297.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334302925|sp|Q94CJ8.3|C3H55_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 55;
Short=AtC3H55
gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana]
gi|27311807|gb|AAO00869.1| putative protein [Arabidopsis thaliana]
gi|332004426|gb|AED91809.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004427|gb|AED91810.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004428|gb|AED91811.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
Length = 650
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 255/415 (61%), Gaps = 47/415 (11%)
Query: 138 GNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLF 197
G+ +G +D++D+ QL D LSFL++S +K +DL PS P + + D
Sbjct: 156 GSADAAGGADLLDDQQLNDCLSFLDDSC----SKTEDLVDPS------IPLDYSVDG--- 202
Query: 198 PSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETG 257
G + +HRRS S S D G G +PC+YF+RG CKNG SC+F+HGG
Sbjct: 203 ----DGETHLHRRSFSCDASFVSGDDGF--GGGCKPCVYFSRGLCKNGESCKFIHGGYPD 256
Query: 258 SGNLMGSDGAATLVGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSS-SFP 315
+ DG + SP KME HE ++R K A QQQRLA SQ++G + P
Sbjct: 257 N-----MDGNGIVADSPRKMENFVRQHEEMMRLKLA----YQQQRLA--SQILGRAPQLP 305
Query: 316 YSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQ 375
Y K M+ LQQ QR +E RLER + +++ N ASRQ
Sbjct: 306 YE-KRMDFLLQQH---AQRDGGLP--FGDERFWSSSPGRLERMELAMH-LGDQSNSASRQ 358
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPH 435
IYLTFPADSTF++EDV+ YFS++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPH
Sbjct: 359 IYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPH 418
Query: 436 FVCDARVLVKPYKEKGKVPDK--YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMF 493
F+CD+RVLVKPYKEKGKV DK + QQQ+ERG +SPC +P+G+D R+ D LG++M
Sbjct: 419 FICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKML 478
Query: 494 YNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH---HHHRALSTGSP 545
Y + + RRK+ EQADL +A+EL+ RR + LQL + K +HHR+ S GSP
Sbjct: 479 YERRE--MMRRKI-EQADLLRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSP 530
>gi|414876222|tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 625
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/427 (45%), Positives = 237/427 (55%), Gaps = 102/427 (23%)
Query: 129 MNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPP 188
+N P + G ++D+ QLQ+QL+FLNE N ++ Q ++ S P
Sbjct: 132 VNGDTAPVFPRQAGDA---LLDDLQLQEQLAFLNEGGGNPAHQIQGF---DGVECRSPGP 185
Query: 189 NGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSC 248
A + F W G HRRS SV+++ G W+PCLY+A G+CKNG SC
Sbjct: 186 GDADGMIAFGLGWHNGGPAHRRSSSVNEICLGGGGGDGFG--WKPCLYYASGFCKNGGSC 243
Query: 249 RFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHE-----LLRSKSAAAAQVQQQRLA 303
RFVHGG SD A L G+ KME + L+RSK
Sbjct: 244 RFVHGGL--------SDDAVALAGT--KMEAAADQQQQCQDFLIRSKG------------ 281
Query: 304 AASQLMGSSSFPYSP------------KSMNLFLQQQQNDTQRAAAAAALMLN--EDMHK 349
Q +G + FPYSP K ++ LQQ+Q RAAAAA+LML ++ HK
Sbjct: 282 ---QRLGPAVFPYSPTGSLPGSPSAASKCLSFLLQQRQQH-DRAAAAASLMLGGGDEAHK 337
Query: 350 F-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
F R RL+R DF A ++NP+SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPY
Sbjct: 338 FMARPRLDRADF-----ASLMNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPY 392
Query: 409 QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE 468
QQKRMFGFVTFVYPETVK+ILAKGNPHF+CD RVLVKPYKEKGK
Sbjct: 393 QQKRMFGFVTFVYPETVKLILAKGNPHFICDTRVLVKPYKEKGK---------------- 436
Query: 469 FSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQ---ADLQQALELQSRRLMG 525
N+ ++L RRK+EEQ A+LQ A+ELQSRRLMG
Sbjct: 437 ------------------------HSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMG 472
Query: 526 LQLLDVK 532
LQLLD+K
Sbjct: 473 LQLLDLK 479
>gi|242082672|ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
gi|241942454|gb|EES15599.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
Length = 637
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/370 (54%), Positives = 243/370 (65%), Gaps = 57/370 (15%)
Query: 202 GGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNL 261
GG++ HRRS S+SD + WRPC+YFARG+CKNGSSCRF+HG L
Sbjct: 137 AGGATAHRRSFSLSD---AEVAGAAGAGAWRPCMYFARGFCKNGSSCRFLHG-------L 186
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSM 321
D AAT ++ E + ++R+K+ AAA+ QQQ+ + S P PK +
Sbjct: 187 PEDDDAAT-----AEREMV-----VMRAKALAAARSQQQQQQLMASAFPFSPSPSPPKGV 236
Query: 322 NL-FL------QQQQNDTQRAAAAAALML------NEDMHKFGR-----SRLERNDFSIN 363
NL FL QQQQN+ QRAAAAAA + +DMH GR R++R +
Sbjct: 237 NLNFLLHHHNQQQQQNEPQRAAAAAAAAMLLQGGGGDDMH--GRFPVRSPRMDRGEL--- 291
Query: 364 GSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPE 423
+ +PA+RQIYLTFPADSTF EEDVSNYFS+YGPVQDVRIPYQQKRMFGFVTFVY E
Sbjct: 292 ----MSSPAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAE 347
Query: 424 TVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRD 482
TVKIIL+KGNPHFVCDARVLVKPYKEKGKVPD++RK Q G+F+ C +PTG LDSRD
Sbjct: 348 TVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHP-HHGDFAGCTSPTGLLDSRD 406
Query: 483 PFDL---QLGARMFYNNT--QDMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVKKH 534
PFDL Q+G RM Y N + RRK+EEQ A+LQQA+EL+ RR MGL LLD+K
Sbjct: 407 PFDLQQPQIGPRMMYGNIANHEAFLRRKLEEQHQAAELQQAIELEGRRFMGLHLLDLKSR 466
Query: 535 HHHRALSTGS 544
HH ST +
Sbjct: 467 GHHLGSSTAA 476
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVI 54
MD +EAT+ VF R++ LDP+NASKIMGLLL+QD+ +KE+IRLAFGP+ L+H+ +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFV 54
>gi|357161178|ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 612
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 225/358 (62%), Gaps = 56/358 (15%)
Query: 208 HRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGA 267
HRRS S+SD ++ GW+PCLY+ARG+CKNG SCRFVHGG
Sbjct: 118 HRRSLSLSDA--------DAAGGWKPCLYYARGFCKNGGSCRFVHGGLP----------- 158
Query: 268 ATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP--KSMNLFL 325
DH A + + A S+LM +S+FP+SP + +N L
Sbjct: 159 -------------DHALAAAEQDMGDAIRAARAEAAVRSELM-ASAFPFSPSPRGLNFLL 204
Query: 326 QQQQNDTQRAA-----AAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
QQQQ+ + A +DMHKF R R D ++ A NPA+RQIYLTF
Sbjct: 205 QQQQHQQSDSQRAAAAMMLAGGGGDDMHKFA-VRSPRLDRCVSDLAS--NPAARQIYLTF 261
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
PADSTF EEDVS+YFS+YGPVQDVRIPYQQKRMFGFVTFVY ETV++ILAKGNPHFVCDA
Sbjct: 262 PADSTFSEEDVSSYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVRLILAKGNPHFVCDA 321
Query: 441 RVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL---QLGARMFYNN 496
RVLVKPYKEKGKVPD++RK +G+F+ TPTG LDSRDPFDL Q+G RM Y N
Sbjct: 322 RVLVKPYKEKGKVPDRFRK-FPHAHQGDFAGSTTPTGLLDSRDPFDLQSPQIGPRMMYAN 380
Query: 497 --TQDMLWRRK---MEEQADLQQALELQSRRLMGLQLLDVK---KHHHHRALSTGSPI 546
+ + RRK ++ A+LQQA++LQ RR MGLQL+D+K HHHH A GSP+
Sbjct: 381 MGSHEAFLRRKLEEQQQAAELQQAIDLQGRRFMGLQLMDMKSRGHHHHHLASPIGSPV 438
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 53/62 (85%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VF+R+Q LDPE ASKIMG+LL+QD E++MIRLAFGPE L+H+V+ +AR +
Sbjct: 1 MDAYEATKVVFARVQALDPELASKIMGMLLVQDRSEEDMIRLAFGPEHLLHTVVARARAD 60
Query: 61 LV 62
+
Sbjct: 61 IA 62
>gi|293333413|ref|NP_001169691.1| uncharacterized protein LOC100383572 [Zea mays]
gi|224030935|gb|ACN34543.1| unknown [Zea mays]
Length = 630
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 222/355 (62%), Gaps = 36/355 (10%)
Query: 204 GSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMG 263
G++ HRRS S+SD + WRPC+YFARG+CKNGS+CRF+HG
Sbjct: 124 GATAHRRSFSLSDA--ELAAAAAGPGAWRPCMYFARGFCKNGSACRFLHG---------- 171
Query: 264 SDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNL 323
+P E +AAA QQQ+L A++ S P ++NL
Sbjct: 172 -----LPEPAPDAAEREMAVMRAKALAAAAARPQQQQQLMASAFPFSPSPSPPKGANLNL 226
Query: 324 FLQ---QQQNDTQRAAAAAALMLN--EDMHKFGRSRLE-RNDFSINGSAGIVNPASRQIY 377
L QQQ++ QRA AA L +DMH SR R+ ++ + +PA+RQIY
Sbjct: 227 LLHHHYQQQSEPQRAGAAMLLQGGGGDDMHS---SRFPLRSPGRMDRGELVSSPAARQIY 283
Query: 378 LTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFV 437
LTFPADSTF E+DVSNYFS+YGPVQDVRIPYQQKRMFGFV+FVY ETV+IIL KGNPHFV
Sbjct: 284 LTFPADSTFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFVYAETVRIILCKGNPHFV 343
Query: 438 CDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL---QLGARMF 493
CDARVLVKPYKEKGKVPD++RK Q G+F+ C +PTG LDSRDPFDL Q+G RM
Sbjct: 344 CDARVLVKPYKEKGKVPDRFRKLQHP-HLGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMM 402
Query: 494 YNNT--QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPI 546
Y N + RRK+EEQ QQA+EL+ RR MGL LLD+K HH S + +
Sbjct: 403 YGNIANHEAFLRRKLEEQ---QQAIELEGRRFMGLHLLDLKIRGHHLGSSPATTV 454
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +EAT+ VF R++ LDP+NASKIMGLLL+QD+ +KE+IRLAFGP+ ++H+ AR +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHILHAFAAAARAD 60
Query: 61 LVRASNSPNSP 71
L SP SP
Sbjct: 61 LAAKPASPPSP 71
>gi|224029225|gb|ACN33688.1| unknown [Zea mays]
Length = 605
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 222/355 (62%), Gaps = 36/355 (10%)
Query: 204 GSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMG 263
G++ HRRS S+SD + WRPC+YFARG+CKNGS+CRF+HG
Sbjct: 99 GATAHRRSFSLSDA--ELAAAAAGPGAWRPCMYFARGFCKNGSACRFLHG---------- 146
Query: 264 SDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNL 323
+P E +AAA QQQ+L A++ S P ++NL
Sbjct: 147 -----LPEPAPDAAEREMAVMRAKALAAAAARPQQQQQLMASAFPFSPSPSPPKGANLNL 201
Query: 324 FLQ---QQQNDTQRAAAAAALMLN--EDMHKFGRSRLE-RNDFSINGSAGIVNPASRQIY 377
L QQQ++ QRA AA L +DMH SR R+ ++ + +PA+RQIY
Sbjct: 202 LLHHHYQQQSEPQRAGAAMLLQGGGGDDMHS---SRFPLRSPGRMDRGELVSSPAARQIY 258
Query: 378 LTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFV 437
LTFPADSTF E+DVSNYFS+YGPVQDVRIPYQQKRMFGFV+FVY ETV+IIL KGNPHFV
Sbjct: 259 LTFPADSTFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFVYAETVRIILCKGNPHFV 318
Query: 438 CDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL---QLGARMF 493
CDARVLVKPYKEKGKVPD++RK Q G+F+ C +PTG LDSRDPFDL Q+G RM
Sbjct: 319 CDARVLVKPYKEKGKVPDRFRKLQHP-HLGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMM 377
Query: 494 YNNT--QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPI 546
Y N + RRK+EEQ QQA+EL+ RR MGL LLD+K HH S + +
Sbjct: 378 YGNIANHEAFLRRKLEEQ---QQAIELEGRRFMGLHLLDLKIRGHHLGSSPATTV 429
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 26 MGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASNSPNSP 71
MGLLL+QD+ +KE++RLAFGP+ ++H+ AR +L SP SP
Sbjct: 1 MGLLLIQDNSDKELVRLAFGPDHILHAFAAAARADLAAKPASPPSP 46
>gi|414866607|tpg|DAA45164.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 356
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/252 (62%), Positives = 179/252 (71%), Gaps = 26/252 (10%)
Query: 323 LFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPA 382
+F + Q D AA L+L +D R DF A ++NP SRQIYLTFPA
Sbjct: 10 VFSRIQALDPDHAAKIMGLLLIQD----------RADF-----ASMMNPGSRQIYLTFPA 54
Query: 383 DSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARV 442
DSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARV
Sbjct: 55 DSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARV 114
Query: 443 LVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT-GLDSRDPFDL-QLGARMFY--NNTQ 498
LVKPYKEKGKVPDKYRKQQQ G+FS C TPT GLD+RDPFDL QLGARM N+
Sbjct: 115 LVKPYKEKGKVPDKYRKQQQ----GDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSAN 170
Query: 499 DMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNI 555
++L RRK+EEQ A+LQ A+ELQSRRLMGLQLLD+K A + +PI + S +
Sbjct: 171 ELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIANAFASSHP 230
Query: 556 FHQNLVFPPLHS 567
V PL S
Sbjct: 231 LSTMAVESPLES 242
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGE 36
MD YEAT++VFSRIQ LDP++A+KIMGLLL+QD +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDRAD 36
>gi|326491203|dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 191/361 (52%), Positives = 228/361 (63%), Gaps = 74/361 (20%)
Query: 208 HRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGA 267
HRRS S+SD ++ GW+PC+Y+ARG+CKNGSSCRFVH
Sbjct: 121 HRRSFSLSDAEAAAG-------GWKPCMYYARGFCKNGSSCRFVH--------------- 158
Query: 268 ATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP-KSMNLFLQ 326
G P DH E AA + S+LM S + +N LQ
Sbjct: 159 ----GLP------DHVTEQDMDVWTAATR---------SELMPSPFPFLPSPRGLNFLLQ 199
Query: 327 QQQ----NDTQRAAAAAALMLNEDM------HKFG-RS-RLERNDFSINGSAGIVNPASR 374
QQQ +D+QRAAAAAA++L HKF RS R++R G NPA+R
Sbjct: 200 QQQQQQQSDSQRAAAAAAMLLGGGGGGGDDMHKFSVRSPRMDR------GGDLASNPAAR 253
Query: 375 QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNP 434
QIYLTFPADSTF EEDVS+YFS YGPVQDVRIPYQQKRMFGFVTFVY ETV++ILAKGNP
Sbjct: 254 QIYLTFPADSTFSEEDVSSYFSYYGPVQDVRIPYQQKRMFGFVTFVYAETVRLILAKGNP 313
Query: 435 HFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL---QLGA 490
HFVCDARVLVKPYKEKGKVPD++RK Q + G+F+ C TPTG LDSRDPFDL Q+G
Sbjct: 314 HFVCDARVLVKPYKEKGKVPDRFRKFQAP-QHGDFAGCTTPTGLLDSRDPFDLQSPQIGP 372
Query: 491 RMFYNNT--QDMLWRRK---MEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSP 545
RM + NT + RRK ++ A+LQQA++LQSRR MGLQ LD+K+ HHH GSP
Sbjct: 373 RMMFGNTGSHEAFLRRKLEEQQQAAELQQAIDLQSRRFMGLQFLDLKRGHHH----LGSP 428
Query: 546 I 546
+
Sbjct: 429 V 429
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VF+R+Q L P+ ASKIMG+LL+QD E++MIRLAFGPE L+ V+ +AR +
Sbjct: 1 MDAYEATKVVFARVQALHPDLASKIMGMLLIQDKSEEDMIRLAFGPEHLLQGVVARARAD 60
Query: 61 LVRASNSPNSPSTPSS 76
L A++ N PS P++
Sbjct: 61 LAAAAHH-NKPSPPAA 75
>gi|414866609|tpg|DAA45166.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 317
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 163/207 (78%), Gaps = 11/207 (5%)
Query: 368 IVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKI 427
++NP SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+
Sbjct: 1 MMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKL 60
Query: 428 ILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL 486
ILAKGNPHF+CDARVLVKPYKEKGKVPDKYRKQQQ G+FS C TPTG LD+RDPFDL
Sbjct: 61 ILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ----GDFSGCTTPTGGLDARDPFDL 116
Query: 487 -QLGARMFY--NNTQDMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVKKHHHHRAL 540
QLGARM N+ ++L RRK+EEQ A+LQ A+ELQSRRLMGLQLLD+K A
Sbjct: 117 HQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATAS 176
Query: 541 STGSPIPSPTHSPNIFHQNLVFPPLHS 567
+ +PI + S + V PL S
Sbjct: 177 ALPTPIANAFASSHPLSTMAVESPLES 203
>gi|168037568|ref|XP_001771275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677364|gb|EDQ63835.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 187/474 (39%), Positives = 242/474 (51%), Gaps = 106/474 (22%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIV+ R+Q L+PE SKIM LLLQ+HGE+EM+RLA G L+ SV+ KA+KE
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMVRLALGSNVLIQSVVKKAKKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L N P ++ PL IP
Sbjct: 61 LGLEDNRDVMPLQHNA----------------------PLYIPD---------------- 82
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNES--SQNLGNKNQDLFYP 178
+ +GS S+V+ L DQ+S L+++ QN + D +YP
Sbjct: 83 ----------------HDFASGSFGSNVLSSPSLHDQMSSLSDAFDRQNSLHAFYDHYYP 126
Query: 179 SQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLG---SSSDDLNSGLGWRPCL 235
+S +H RS S L SSS DL L W+PCL
Sbjct: 127 ETYAFLNSSKE----------------FLHSRSSSSRASLAVDSSSSPDLGPALAWKPCL 170
Query: 236 YFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSKSAAA 294
YFARGYCK+GSSCRF+HG + DG A P +E ++ ELLR + A
Sbjct: 171 YFARGYCKHGSSCRFLHGMD---------DGMA-----PGSLERLEIELQELLRGRRAPV 216
Query: 295 A-----QVQQQR----LAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAAAALM 342
+ Q+ +R L A L S + S+ L + +N R A++
Sbjct: 217 SIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVV 276
Query: 343 LNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 402
L ED H+F R + ++G +NP+SRQIYLTFPA+STF EEDV+ +F YGPVQ
Sbjct: 277 LAEDAHRFTAYRSDHRGEDLSG----INPSSRQIYLTFPAESTFTEEDVTAHFRAYGPVQ 332
Query: 403 DVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
DVRIPYQQKRMFGFVTFVY ETVK IL++GNPH++C ARVLVKPY+EKGK D+
Sbjct: 333 DVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGKHGDR 386
>gi|168011119|ref|XP_001758251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690707|gb|EDQ77073.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 239/469 (50%), Gaps = 61/469 (13%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIV+ R+Q L+PE SKIM LLLQ+HGE+EM+RLA G L+ SV+ KA+KE
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMLRLALGSNVLMQSVVKKAKKE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L + P P+P + +S GSN L + +T N
Sbjct: 61 LGLDDSRSVMPPLQKRPAPLYIPDHEFASGGFGSNVLTSPGLLDQVKLATIQQQHHN--Q 118
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
L Q ++ S V ++ D +FLN S + L +++
Sbjct: 119 LFLQDQLPLHDHLSLLSDAVDQQNSLRVYTDHYYPDTYAFLNSSKEILHSRSSSSRASPI 178
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
+D SSSPP DL L W+PCLYFARG
Sbjct: 179 VD-SSSPP-----------------------------------DLGPTLAWKPCLYFARG 202
Query: 241 YCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSKSAAAA---- 295
YCK+GSSCR G L DG A P +E ++ ELLR + A +
Sbjct: 203 YCKHGSSCRSP-ASSNGHRELRVDDGMA-----PGSLERLEIELQELLRGRRAPVSIASL 256
Query: 296 -QVQQQR----LAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAAAALMLNEDM 347
Q+ +R L A L S + S+ L + +N R A++L ED
Sbjct: 257 PQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHGQHAVVLAEDA 316
Query: 348 HKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
H+F R + ++G +NP+SRQIYLTFPA+STF EEDV+++F YGPVQDVRIP
Sbjct: 317 HRFTVHRSDHRGEDLSG----INPSSRQIYLTFPAESTFCEEDVTSHFRAYGPVQDVRIP 372
Query: 408 YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
YQQKRMFGFVTFVY ETVK IL++GNPH++C ARVLVKPY+EKGK D+
Sbjct: 373 YQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGKHGDR 421
>gi|224104195|ref|XP_002313354.1| predicted protein [Populus trichocarpa]
gi|222849762|gb|EEE87309.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 180/269 (66%), Gaps = 13/269 (4%)
Query: 290 KSAAAAQVQQQRLA--AASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDM 347
K A+ VQQ+ L A+Q Y+ K MN FL QQQN T R AAAA+M ++
Sbjct: 61 KVASLFMVQQEELMRMKAAQQQQQQRMAYN-KYMN-FLLQQQNKTDRLGAAAAMM-GDEF 117
Query: 348 HKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
+ F R R RN F G A N ASRQIYLTFPADS+F++EDVSNYF +GPVQDVRIP
Sbjct: 118 YNFSRLRGGRNGFFAMGMAEKANSASRQIYLTFPADSSFKDEDVSNYFCSFGPVQDVRIP 177
Query: 408 YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERG 467
YQQKRMFGFVTFV+PETVK ILAKGNPH++C++RVLVKPYKEKGKV +KY + G
Sbjct: 178 YQQKRMFGFVTFVHPETVKEILAKGNPHYICESRVLVKPYKEKGKVANKY-GCNSYLRGG 236
Query: 468 EFSPCGT--PTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMG 525
F L+S F L + ARM YN + ML RRK+EEQA+LQQA+ELQ RRL+
Sbjct: 237 IFHLLQALQVLILESYVIFTL-VRARMLYNTPEIML-RRKLEEQAELQQAIELQGRRLIN 294
Query: 526 LQLLDVK---KHHHHRALSTGSPIPSPTH 551
LQL D++ H H R+LS G+PI TH
Sbjct: 295 LQLPDLRGDYVHRHQRSLSVGAPISLHTH 323
>gi|297821268|ref|XP_002878517.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
gi|297324355|gb|EFH54776.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/227 (59%), Positives = 160/227 (70%), Gaps = 43/227 (18%)
Query: 312 SSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNP 371
+ +P+SPK +NL QQ++ + + AAALM+ +D+HK GR R ER D S + P
Sbjct: 111 TGYPFSPKGVNL----QQSEAK--SRAAALMMGDDLHKLGRWRPERIDLS-----AMACP 159
Query: 372 ASRQIYLTFPADSTFREEDVSNYFSI----YGPVQDVRIPYQQKRMFGFVTFVYPETVKI 427
ASRQIYLTFPADS FREEDVS+YFS+ +GPVQDVRIP+QQKRMFGFVTF+YP+TVK
Sbjct: 160 ASRQIYLTFPADSIFREEDVSDYFSMVVQYFGPVQDVRIPFQQKRMFGFVTFMYPDTVKS 219
Query: 428 ILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQ 487
ILAKGNPHFVCD+RVLVKPYKEKGKVPDKY RD D Q
Sbjct: 220 ILAKGNPHFVCDSRVLVKPYKEKGKVPDKY-----------------------RDIMDFQ 256
Query: 488 LGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH 534
LG R F++NTQD+LW+R+ EE +ALELQS RLM LQLLDVKK
Sbjct: 257 LGGRAFHDNTQDLLWKRRFEE-----RALELQSTRLMNLQLLDVKKQ 298
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATR+V SRIQ+LDP NASKIMGLLLLQDHGEKEMIRLAFGP+ L+HSVI KA+K+
Sbjct: 1 MDVYEATRVVLSRIQSLDPANASKIMGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|334186234|ref|NP_001190170.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646964|gb|AEE80485.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 406
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/253 (57%), Positives = 168/253 (66%), Gaps = 49/253 (19%)
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAAL 341
H E+LRS S RLA +Q G +P+SPK +NL QQ++ QRAAA L
Sbjct: 86 HRKEVLRSNSVPP------RLA--NQFTG---YPFSPKGVNL----QQSEAQRAAA---L 127
Query: 342 MLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
M+ +D+HK G R ER D S PASRQIYLTFPADS FREEDVS+YFS +GPV
Sbjct: 128 MMGDDLHKLGIWRPERIDLSATAC-----PASRQIYLTFPADSIFREEDVSDYFSTFGPV 182
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHFVC +RVLVKPYKEKGKVPDKYR +
Sbjct: 183 QDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKYRTKP 242
Query: 462 QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSR 521
SRD D QLG R F+ +D+LW+R+ EE +ALELQS
Sbjct: 243 ------------------SRDIMDFQLGGRAFH---EDLLWKRRFEE-----RALELQST 276
Query: 522 RLMGLQLLDVKKH 534
RLM LQLLDV+K
Sbjct: 277 RLMNLQLLDVEKQ 289
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLAFGP+ L+HSVI KA+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP 99
L S +P T L +L SN++PP
Sbjct: 61 L-EERLSFLTPRTAEDFESDLGFGWGHRKEVLRSNSVPP 98
>gi|413924733|gb|AFW64665.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 697
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/282 (53%), Positives = 185/282 (65%), Gaps = 54/282 (19%)
Query: 189 NGATDSMLFPSY--W--GGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKN 244
+G D+ Y W G + HRRS S+SD ++S WRPC+Y+ARGYCKN
Sbjct: 114 DGGADAFYADEYDCWSPAGAAGAHRRSFSLSDAEAAAS--------WRPCMYYARGYCKN 165
Query: 245 GSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAA 304
GSSCRF+HG + D AA + ++R+K+ AAA QQ+
Sbjct: 166 GSSCRFLHG--------VPEDDAA------------EREMAVMRAKALAAAPPTQQQ--- 202
Query: 305 ASQLMGSSSFPYSPK------SMNLFLQQQQNDTQRAAAAAALMLNEDMHKF-GRS-RLE 356
QLM +S++P+SP L QQQQ++TQRAAA L+ EDMH+F RS R++
Sbjct: 203 --QLM-ASAYPFSPSPKGGVSLSFLLQQQQQSETQRAAAGM-LLGGEDMHRFPVRSPRMD 258
Query: 357 RNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 416
R D I +PA+RQIYLTFPADSTF EEDVSNYFS++GPVQDVRIPYQQKRMFGF
Sbjct: 259 RGDL-------IGSPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRMFGF 311
Query: 417 VTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
VTFVY ETVK IL+KGNPHFVCDARVLVKPYKEKGKVPD++R
Sbjct: 312 VTFVYAETVKAILSKGNPHFVCDARVLVKPYKEKGKVPDRFR 353
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 11/100 (11%)
Query: 458 RKQQQQVERG-EFSPCGTPTGL-DSRDPFDLQ---LGARMFYNNT---QDMLWRRKMEEQ 509
RK Q G EF C +PTGL DSRDP+DLQ +G+RM Y N + RRK+EE+
Sbjct: 417 RKLQHTHHGGAEFVGCASPTGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEE 476
Query: 510 --ADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIP 547
A+LQQA+EL+ RR MGLQLLD+K HH L +G+P+P
Sbjct: 477 QAAELQQAIELEGRRFMGLQLLDLKSRGHHH-LGSGAPMP 515
>gi|255587629|ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis]
Length = 578
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 279/558 (50%), Gaps = 94/558 (16%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T++V++RIQ L+PEN SKI+G LLLQDH E+EMIRLAF P+ L++S+I KA+ +
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 61 L---VRASNSPNSPS----TPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWS-TAV 112
L A ++P SPS +P S P S +S P++ P+ + + +A
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPAS-------AHPISSPAASRRTASAY 113
Query: 113 TDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKN 172
D T + +P G+ S V ++Y+LQ+ + FL Q
Sbjct: 114 WD----------AQVTGDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQF----- 158
Query: 173 QDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWR 232
+ + D SS+ F S G +RRS S+ + +
Sbjct: 159 -EFAHSVNSDFSSN---------YFYSEPALGPRTNRRSPSLPE------------FPLK 196
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSG---------NLMGSDGAATLVGSPSKMEPIDHC 283
C YF++GYCK+G++CR+VHG G N +D GS K+E
Sbjct: 197 ICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDEHVVSPGSLEKLEM--EL 254
Query: 284 HELLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ 333
ELL+S+ + + L A L S + S+ L + +N +
Sbjct: 255 AELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 314
Query: 334 ---RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREED 390
R +++L ED+ K+ ERND GIV SRQIYLTFPA+S F E D
Sbjct: 315 VIDRPHGQHSVILEEDVPKYLEYVGERND-----PGGIV-AGSRQIYLTFPAESIFTEHD 368
Query: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
VS YFS +GPVQDVRIP QQKRMFGFVTF++ ETVK ILAKGNPH+VC ARVLVKPY+EK
Sbjct: 369 VSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVKPYREK 428
Query: 451 GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQA 510
++ D RK ++++ ++ G D +L ++ +L ++ MEE
Sbjct: 429 SRLID--RKFSEKLQHPMYNSSHFIDG-------DSELHPMPTISDNSRLLRKQLMEEN- 478
Query: 511 DLQQALELQSRRLMGLQL 528
+ ALE + RRL+ L
Sbjct: 479 --EHALEFERRRLLEFHL 494
>gi|242069801|ref|XP_002450177.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
gi|241936020|gb|EES09165.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
Length = 612
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 164/218 (75%), Gaps = 20/218 (9%)
Query: 341 LMLNEDMHKFG-RS-RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
++ EDMH+F RS R++R D I +PA+RQIYLTFPADSTF EEDVSNYFS++
Sbjct: 221 VLGGEDMHRFPVRSPRMDRGDL-------IGSPAARQIYLTFPADSTFSEEDVSNYFSMF 273
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
GPVQDVRIPYQQKRMFGFVTFVY ETVK++L+KGNPHFVCDARVLVKPYKEKGKVPD++R
Sbjct: 274 GPVQDVRIPYQQKRMFGFVTFVYAETVKVLLSKGNPHFVCDARVLVKPYKEKGKVPDRFR 333
Query: 459 K-QQQQVERGEFSPCGTPTG-LDSRDPFDL---QLGARMFYNN--TQDMLWRRK---MEE 508
K Q GEF+ C +PTG LDSRDP+DL Q+G RM Y N + RRK ++
Sbjct: 334 KLQHAHHGVGEFAGCTSPTGLLDSRDPYDLQQPQIGPRMMYGNMANHEAFLRRKLEEQQQ 393
Query: 509 QADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPI 546
A+LQQA+EL+ RR MGLQLLD+K HH L GSP+
Sbjct: 394 AAELQQAIELEGRRFMGLQLLDLKSRGHHH-LGLGSPV 430
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD +EAT++VF R++ LDPENAS++MGLLL+QD+ +KE+IRLAFGP+ L+H+ + AR E
Sbjct: 1 MDAWEATKVVFDRVRELDPENASRMMGLLLIQDNSDKELIRLAFGPDHLLHAFVATARAE 60
Query: 61 LVRASNSPNSPSTP 74
L A+ P SP +P
Sbjct: 61 LA-ANGKPASPPSP 73
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Query: 201 WGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHG 253
W H RS S+SD +++ WRPC+Y+ARGYCKNGSSCRF+HG
Sbjct: 126 WSPAGGAHCRSFSLSDAEAAAAS-------WRPCMYYARGYCKNGSSCRFLHG 171
>gi|79316196|ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|79456990|ref|NP_191904.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|46518429|gb|AAS99696.1| At3g63450 [Arabidopsis thaliana]
gi|332646962|gb|AEE80483.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646963|gb|AEE80484.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 404
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/253 (56%), Positives = 166/253 (65%), Gaps = 51/253 (20%)
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAAL 341
H E+LRS S RLA +Q G +P+SPK +NL QQ++ QRAAA L
Sbjct: 86 HRKEVLRSNSVPP------RLA--NQFTG---YPFSPKGVNL----QQSEAQRAAA---L 127
Query: 342 MLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
M+ +D+HK G R ER D S PASRQIYLTFPADS FREEDVS+YFS +GPV
Sbjct: 128 MMGDDLHKLGIWRPERIDLSATAC-----PASRQIYLTFPADSIFREEDVSDYFSTFGPV 182
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHFVC +RVLVKPYKEKGKVPDK +
Sbjct: 183 QDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKTKP-- 240
Query: 462 QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSR 521
SRD D QLG R F+ +D+LW+R+ EE +ALELQS
Sbjct: 241 ------------------SRDIMDFQLGGRAFH---EDLLWKRRFEE-----RALELQST 274
Query: 522 RLMGLQLLDVKKH 534
RLM LQLLDV+K
Sbjct: 275 RLMNLQLLDVEKQ 287
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLAFGP+ L+HSVI KA+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP 99
L S +P T L +L SN++PP
Sbjct: 61 L-EERLSFLTPRTAEDFESDLGFGWGHRKEVLRSNSVPP 98
>gi|7573328|emb|CAB87798.1| putative protein [Arabidopsis thaliana]
Length = 399
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 163/253 (64%), Gaps = 56/253 (22%)
Query: 282 HCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAAL 341
H E+LRS S RLA +Q G +P+SPK +NL QQ++ QRAAA L
Sbjct: 86 HRKEVLRSNSVPP------RLA--NQFTG---YPFSPKGVNL----QQSEAQRAAA---L 127
Query: 342 MLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
M+ +D+HK G R ER D S PASRQIYLTFPADS FREEDVS+YFS +GPV
Sbjct: 128 MMGDDLHKLGIWRPERIDLSATAC-----PASRQIYLTFPADSIFREEDVSDYFSTFGPV 182
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQQKRMFGFVTF+YPETVK ILAKGNPHFVC +RVLVKPYKEKGKVPDKYR +
Sbjct: 183 QDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEKGKVPDKYRTKP 242
Query: 462 QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQSR 521
SRD D QL D+LW+R+ EE +ALELQS
Sbjct: 243 ------------------SRDIMDFQL----------DLLWKRRFEE-----RALELQST 269
Query: 522 RLMGLQLLDVKKH 534
RLM LQLLDV+K
Sbjct: 270 RLMNLQLLDVEKQ 282
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEATRIV SRIQNLDP NASKI+GLLLLQDHGEKEMIRLAFGP+ L+HSVI KA+K+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPP 99
L S +P T L +L SN++PP
Sbjct: 61 L-EERLSFLTPRTAEDFESDLGFGWGHRKEVLRSNSVPP 98
>gi|302796663|ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
gi|300152320|gb|EFJ18963.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
Length = 394
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 241/468 (51%), Gaps = 86/468 (18%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VF+R+Q DPEN SKI+GL+LLQD E+EM RLA G +AL+ S I KAR+E
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDL----P 116
L + +P+ P + + + +L L IP G + S++ ++L P
Sbjct: 61 LGLFAANPH----PGLSDQHHHHRQHHHQQRINRPSL--LFIPEGGTVSSSPSNLFQPSP 114
Query: 117 NPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLF 176
+PD+ D++ LN + Q +++ L
Sbjct: 115 SPDEF--------------------------ATDQW-------LLNHNHQFQLHQDPLLK 141
Query: 177 YPSQMDLSSSPPNGATDSML----FP-SYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGW 231
S+ SSSP A L FP S++ SS DL L
Sbjct: 142 NTSRFSTSSSPAADAQRRHLQQLQFPASHY------------------PSSHDLAMALTC 183
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKS 291
+PCLY+++G+CK G+SCR +GS + + L G + + I +L K
Sbjct: 184 KPCLYYSKGHCKRGTSCR---SPSSGSLERLEMELQELLRGRRTPVS-IASLPQLYFEKF 239
Query: 292 AAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAAAALMLNEDMH 348
A +Q Q SQ G + S+ L + + R A++L ED
Sbjct: 240 GRA--LQAQGYLTESQRHGKAGC-----SLTKLLARLKGSVALIDRPHGQHAVVLAEDAQ 292
Query: 349 KFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
+F R +R+D VNP+SRQIYLTFPA+STF E+DVS +F YGPVQDVRIPY
Sbjct: 293 RFVGYRADRDDLKD------VNPSSRQIYLTFPAESTFTEDDVSAHFRSYGPVQDVRIPY 346
Query: 409 QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
QQKRMFGFVTF+YPETVK IL++GNPH++C ARVLVKPY+EK K+ ++
Sbjct: 347 QQKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 394
>gi|414882095|tpg|DAA59226.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 379
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 152/206 (73%), Gaps = 14/206 (6%)
Query: 341 LMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGP 400
L +DMH SR ++ + +PA+RQIYLTFPADSTF EEDVSNYFS+YGP
Sbjct: 3 LQGGDDMH----SRFPVRSPRMDRGELMSSPAARQIYLTFPADSTFSEEDVSNYFSMYGP 58
Query: 401 VQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ 460
VQDVRIPYQQKRMFGFVTFVY ETVKIIL+KGNPHFVCDARVLVKPYKEKGKVPD++RK
Sbjct: 59 VQDVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKL 118
Query: 461 QQQVERGEFSPCGTPTG-LDSRDPFDL---QLGARMFYNNT--QDMLWRRK---MEEQAD 511
Q G+F+ C +PTG LDSRDPFDL Q+G RM Y N + RRK ++ A+
Sbjct: 119 QHP-HHGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAE 177
Query: 512 LQQALELQSRRLMGLQLLDVKKHHHH 537
LQQA+EL+ RR MGL LLD+K HH
Sbjct: 178 LQQAIELEGRRFMGLHLLDLKSRGHH 203
>gi|240255377|ref|NP_188747.5| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642939|gb|AEE76460.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 13/212 (6%)
Query: 370 NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIIL 429
N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQKRMFGFVTF++ ETV+IIL
Sbjct: 8 NSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIIL 67
Query: 430 AKGNPHFVCDARVLVKPYKEKGKVPDK--YRKQQQQVERGEFSPCGTPTGLDSRDPFDLQ 487
A+GNPHF+CD+RVLVKPYKEKG++ +K ++ QQ+ERG FSP +P+G+DSRD FD
Sbjct: 68 ARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDSRDLFDSH 127
Query: 488 LGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH---HHHRALSTGS 544
L RMF +NTQ+M+ R+ EQADLQQA+E Q RR + LQL D+ HH R+LS GS
Sbjct: 128 LAPRMF-SNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQRSLSIGS 184
Query: 545 PIPSPTHSPNIFHQNLVFPPLHSSSAEPPPGN 576
P+ SP + +Q+++F S+S E GN
Sbjct: 185 PV---HFSPRV-NQSMLFRS-ESTSDEVFEGN 211
>gi|224129150|ref|XP_002320513.1| predicted protein [Populus trichocarpa]
gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 266/553 (48%), Gaps = 110/553 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T++V++RIQ ++PE KI+G +LLQ+HGE+EMIRLAF P+ L+++ I KA+ +
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L +P +PS +P V+D+
Sbjct: 61 LGLNKTPVPNPISPSQVNP------------------------------APVSDVHL--Q 88
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
IP T + + + P GS + +Y+LQ+Q+ FL Q L N D
Sbjct: 89 FIPNTAVSSHPISSPIKIRTAGSFWDAQVTDYRLQNQMQFLTSDDQ-LEFVNSDF----- 142
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
+ S +P G RRS S+ + + C YF +G
Sbjct: 143 -----------SSSYFYPE-PALGPRTSRRSPSLPE------------FPVKICHYFNKG 178
Query: 241 YCKNGSSCRFVHGG---ETGS------GNLMGSDGAATLVGSPSKME------------- 278
+CK+G++CR+ HG E+ S N + +D GS K+E
Sbjct: 179 FCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHFISPGSLEKLELELTELLKSRRGV 238
Query: 279 PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ---RA 335
P+ + +Q + SQ G + + S+ L + +N + R
Sbjct: 239 PVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGY-----SLTKLLARLKNSIRLIDRP 293
Query: 336 AAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYF 395
+++L ED+ K+ ERND GIV SRQIYLTFPA+STF E+DVSNYF
Sbjct: 294 HGQHSVILTEDVPKYLEYAGERND-----PGGIV-AGSRQIYLTFPAESTFTEQDVSNYF 347
Query: 396 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 455
S +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPH VC ARVLVKPY+EK ++ D
Sbjct: 348 SKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVD 407
Query: 456 KYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQA 515
RK ++++ F G D +L + + +L ++ MEE +QA
Sbjct: 408 --RKYAEKIQHPFFYSQHFIDG-------DSELHSVPRVCDNSRLLRKQLMEEH---EQA 455
Query: 516 LELQSRRLMGLQL 528
LEL+ RRL QL
Sbjct: 456 LELERRRLSEFQL 468
>gi|255576322|ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis]
Length = 551
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 242/476 (50%), Gaps = 86/476 (18%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E TR+VF++I+ ++PEN +KI+G LLLQD ++EMI LA P+ ++ VI KA+ E
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 61 LVR-ASNSPNSPSTPSSPSPFLARQNSSSSRLLG----SNNLPP--LTIPSGTSWSTAVT 113
L + A S +P +PS SP + SS R + L P +PS T W + V
Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPS-TYWESQVA 119
Query: 114 DLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQ----NLG 169
+ D +P T D + E LQ+Q FL+ Q NLG
Sbjct: 120 S-KHSSDFVPMTY-------------------QDSMTE--LQNQAQFLSLEDQLESVNLG 157
Query: 170 NKN--QDLFYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNS 227
N DLFY +D+ L G RR S+++ NS
Sbjct: 158 NAGFPSDLFY--------------SDAALGSFRARAG----RRYSSLNE---------NS 190
Query: 228 GLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHEL 286
+ C YF +GYCK+GS+CR+ HG + S + SP +E ++ EL
Sbjct: 191 ---MKICHYFNKGYCKHGSNCRYFHGQISDSFPRTFDAINEDQIFSPGSLEKLELEIIEL 247
Query: 287 LRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ--- 333
L+S+ + + L A L S + S+ L + +N +
Sbjct: 248 LKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKAGYSLTKLLARLKNSIRLID 307
Query: 334 RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
R A++L ED+ K+ +R +RND G + SRQIYLTFPA+STF E+DVSN
Sbjct: 308 RPHGQHAVILAEDVPKYMENRGDRND------PGPIVSGSRQIYLTFPAESTFTEDDVSN 361
Query: 394 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKE 449
YF+ +GPV+DVRIP QQKRMFGFVTF +TVKIILAKGNPHFVC+ARVLVKPY+E
Sbjct: 362 YFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNARVLVKPYRE 417
>gi|110738379|dbj|BAF01116.1| hypothetical protein [Arabidopsis thaliana]
Length = 297
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 158/213 (74%), Gaps = 14/213 (6%)
Query: 370 NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIIL 429
N AS+QIYLTFPADS+F +EDVSNYF +GPVQDVRIPYQQKRMFGFVTF++ ETV+IIL
Sbjct: 8 NSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIIL 67
Query: 430 AKGNPHFVCDARVLVKPYKEKGKVPDKYR---KQQQQVERGEFSPCGTPTGLDSRDPFDL 486
A+GNPHF+CD+RVLVKPYKEKG++ + R + QQ+ERG FSP +P+G+ SRD FD
Sbjct: 68 ARGNPHFICDSRVLVKPYKEKGRILENRRQQQQLLQQMERGNFSPGSSPSGMGSRDLFDS 127
Query: 487 QLGARMFYNNTQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKH---HHHRALSTG 543
L RMF +NTQ+M+ R+ EQADLQQA+E Q RR + LQL D+ HH R+LS G
Sbjct: 128 HLAPRMF-SNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQRSLSIG 184
Query: 544 SPIPSPTHSPNIFHQNLVFPPLHSSSAEPPPGN 576
SP+ SP + +Q+++F S+S E GN
Sbjct: 185 SPV---HFSPRV-NQSMLFRS-ESTSDEVFEGN 212
>gi|225447594|ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 273/568 (48%), Gaps = 108/568 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T++V++RIQ L+PEN SKI+G LLLQDHGE++MIR AF + + +I KA+ E
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 61 LVRASN-SPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPD 119
L +S + +SP +P +P S S L PL + S P P
Sbjct: 61 LGLSSKPAVSSPISPPQVNP------SPVSDL-------PLQFTPFSPASARPFPSPRPG 107
Query: 120 DLIPQTTTTMNSSALPFYGNGTGSGSSDVI-DEYQLQDQLSFLNESSQ---NLGNKNQDL 175
+ + + G+ G SD + D+++LQ Q+ FL Q ++G++
Sbjct: 108 NSYWDPQVNGDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGS 167
Query: 176 FYPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCL 235
+Y ++ L++ + RRS S+ + + C
Sbjct: 168 YYYAEQALNTR--------------------ISRRSPSLPE------------FPLKVCH 195
Query: 236 YFARGYCKNGSSCRFVHGG----------ETGSGNLMGSDGA-----------------A 268
YF +G+CK+G+SCR+ HG G+ L D
Sbjct: 196 YFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLEKLELELTELLK 255
Query: 269 TLVGSPSKME--PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQ 326
+ G P + P+ + + R+ A + QR A YS + L+
Sbjct: 256 SRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAG---------YSLTKLLARLK 306
Query: 327 QQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTF 386
R +++L ED+ K+ ER+D G + +S+QIYLTFPADSTF
Sbjct: 307 NSIRLIDRPHGQHSVILAEDLPKYMEVNGERSD------PGAIVGSSKQIYLTFPADSTF 360
Query: 387 REEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
E+DVSNYF+ +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL KGNPH++C ARVLVKP
Sbjct: 361 TEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKP 420
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKM 506
Y+EK + V+R + +P +D +LQ R+ +N++ + ++ M
Sbjct: 421 YREKAS--------SRTVDRRQHPMYYSPHFIDEDS--ELQSIPRVC-DNSRLLRKQQLM 469
Query: 507 EEQADLQQALELQSRRLMGLQLLDVKKH 534
EE +QALEL+ RRL LQL H
Sbjct: 470 EEH---EQALELERRRLSELQLTPKTAH 494
>gi|356527124|ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 555
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 267/554 (48%), Gaps = 101/554 (18%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E TRIVF ++ +PENA+KI+G LLLQDHGE++M++LA P+ L+ V KAR E
Sbjct: 1 MDISEYTRIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTE 60
Query: 61 LVR-ASNSPNSP-STPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP 118
L R AS S P S P++ L+ + S P I GT S A + +P
Sbjct: 61 LQRLASRSAIQPISLPTNSQQCLSHLSVIS---------PTSVITPGTLTSPASFQVQSP 111
Query: 119 DDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYP 178
PQ+ + N+ + G D I E Q Q L L
Sbjct: 112 Y-WDPQSASNTNAEFMAL-------GYVDSISELQKQTPLFSLE---------------- 147
Query: 179 SQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFA 238
+ MD +S G + Y+G +S S S++ G + + C YF
Sbjct: 148 NHMDTMNSGTAGIAND-----YYGLDAS------SASNLGGKNG---RFEFPVKTCHYFN 193
Query: 239 RGYCKNGSSCRFVHGGETGS--------GNLMGSDGAATLVGSPSKMEPIDHCHELLRSK 290
+G+CK+G+SCR+ H E G+ GN + +D GS +++E ELL+ K
Sbjct: 194 KGFCKHGNSCRYYH--EQGAPDMFSHMYGNDIFNDDQVISPGSLAQLE--SEIVELLKLK 249
Query: 291 SAAAAQVQ----------QQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ---RAAA 337
+ + ++ L A L S S S+ L + +N + R
Sbjct: 250 KGGSISIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYSLTKLLARLKNSIRLIDRPHG 309
Query: 338 AAALMLNEDMHKFGRSRLERNDFSINGSAGIVN--PASRQIYLTFPADSTFREEDVSNYF 395
+++L ED KF NG ASRQIYLTFPADSTF E DVSNYF
Sbjct: 310 QHSVVLAEDAPKF------------NGKVDYAKYISASRQIYLTFPADSTFSEGDVSNYF 357
Query: 396 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 455
S +G V+DVRIP Q++RMFGFVTF PETVK+IL KGNPH+VC++RVLVKPYKEK K+
Sbjct: 358 STFGKVEDVRIPSQERRMFGFVTFDDPETVKVILDKGNPHYVCESRVLVKPYKEKPKL-- 415
Query: 456 KYRKQQQQVERGEFSPCGTPTGLD-SRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQ 514
RK ++E + +P +D +P + R + RR++ Q + +
Sbjct: 416 MLRKNSDRIEHSAYY---SPHYVDIDTEPTSIPRSCR------KPRFLRRQLINQQE-EA 465
Query: 515 ALELQSRRLMGLQL 528
ALE Q +R LQL
Sbjct: 466 ALEFQRQRFAELQL 479
>gi|414866610|tpg|DAA45167.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 292
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 136/179 (75%), Gaps = 11/179 (6%)
Query: 396 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 455
SIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPD
Sbjct: 4 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 63
Query: 456 KYRKQQQQVERGEFSPCGTPTG-LDSRDPFDL-QLGARMFY--NNTQDMLWRRKMEEQ-- 509
KYRKQQQ G+FS C TPTG LD+RDPFDL QLGARM N+ ++L RRK+EEQ
Sbjct: 64 KYRKQQQ----GDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQ 119
Query: 510 -ADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNIFHQNLVFPPLHS 567
A+LQ A+ELQSRRLMGLQLLD+K A + +PI + S + V PL S
Sbjct: 120 AAELQHAIELQSRRLMGLQLLDLKARAAATASALPTPIANAFASSHPLSTMAVESPLES 178
>gi|356569657|ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 552
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 268/554 (48%), Gaps = 100/554 (18%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E TRIVF ++Q +PE+ +KI+G LLLQDHGE+EM++LA P+ L+ V KAR E
Sbjct: 1 MDISEYTRIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTE 60
Query: 61 LVR-ASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPD 119
L R A+ S P + P ++Q + ++ P I GT S A + +P
Sbjct: 61 LQRLAARSAIQPIS----LPINSQQCLNHLSVIS----PTSVITPGTPTSPASFQVQSPY 112
Query: 120 DLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPS 179
PQ+ + N+ + G D I E+Q Q L L+ +
Sbjct: 113 -WDPQSASNTNAEFMAL-------GYLDSISEFQKQTPLFSLD----------------N 148
Query: 180 QMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFAR 239
MD +S G + Y+G +S SVS++ G + + C YF +
Sbjct: 149 HMDTMNSGTAGIAND-----YYGLDAS------SVSNLGGKNGRRFE--FPVKTCHYFNK 195
Query: 240 GYCKNGSSCRFVHGGETGS--------GNLMGSDGAATLVGSPSKMEPIDHCHELLRSKS 291
G+CK+G+SCR+ H E G GN +D GS +++E ELL+ K
Sbjct: 196 GFCKHGNSCRYYH--EHGVPDMFSHMYGNDTFNDDPVISPGSLAQLE--SEIVELLKLKK 251
Query: 292 AAAAQVQ----------QQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ---RAAAA 338
+ + ++ L A L S S S+ L + +N + R
Sbjct: 252 GGSISIASLPMAYYERYKKVLQAEGYLTESQRHGKSGYSLTKLLARLKNSIRLIDRPHGQ 311
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSA--GIVNPASRQIYLTFPADSTFREEDVSNYFS 396
+++L ED KF NG G ASRQIYLTFPADSTF E DVS YFS
Sbjct: 312 HSVVLAEDAPKF------------NGKVDYGKYISASRQIYLTFPADSTFSEGDVSYYFS 359
Query: 397 IYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK-VPD 455
+G V+DVRIP Q++RMFGFVT PETVK+IL KGNPH+VC++RVLVKPYKEK K +P
Sbjct: 360 TFGKVEDVRIPSQERRMFGFVTLNDPETVKVILDKGNPHYVCESRVLVKPYKEKPKFMPR 419
Query: 456 KYRKQQQQVERGEFSPCGTPTGLD-SRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQ 514
K+ +R E S +P +D +P + R F N L R +E+Q +
Sbjct: 420 KHS------DRIEHSAYYSPHYVDIDTEPTSI---PRSFRN--PRFLRRLLIEKQE--EA 466
Query: 515 ALELQSRRLMGLQL 528
A E Q RR LQ+
Sbjct: 467 AFEFQRRRFAELQM 480
>gi|356552675|ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 547
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 262/540 (48%), Gaps = 93/540 (17%)
Query: 7 TRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASN 66
T IVF +IQ +PENA KI+G L Q HGE+EM +LA P+ + V ++ARKEL R +
Sbjct: 6 TSIVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRLAA 65
Query: 67 SPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTT 126
P+ + + +P + L L++ S + ++ +P P PQ+
Sbjct: 66 KPDMLAMSLTVNP--------------QHGLSDLSVISPRTPTSPNFQVP-PPYWDPQSA 110
Query: 127 TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSS 186
+N + G D I E Q Q Q+ L +Q+D +
Sbjct: 111 GNVNPDFM-------GMNYLDSIVELQKQTQM----------------LTLENQIDAVKT 147
Query: 187 PPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGS 246
G + Y+G +S LG + S + C YF +G+CK+G+
Sbjct: 148 GTGGIAND-----YYGLDASAAN--------LGGKAGRRFSEFPMKICHYFNKGFCKHGT 194
Query: 247 SCRFVHGGET--GSGNLMGSDGAAT-LVGSPSKMEPID-HCHELLRSKSA---------A 293
SCRF HG + G+D + V SP + ++ ELLR+K A
Sbjct: 195 SCRFYHGQVVPENFSQMYGNDAISEDQVISPGSLAQLESEIIELLRTKGGPMSIASLPMA 254
Query: 294 AAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ---RAAAAAALMLNEDMHKF 350
++ L A L S S S+ L + N + R +++L ED
Sbjct: 255 YYDKYKKVLQADGYLTESQRHGKSGYSLTKLLARLNNSIRLIGRPHGQHSVVLAED---- 310
Query: 351 GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ 410
+++++ DF+ N SA SRQIYLTFPADSTF E+DVSNYF+ +GPV DVRIP QQ
Sbjct: 311 APTQMQKGDFARNISA------SRQIYLTFPADSTFTEDDVSNYFNTFGPVADVRIPNQQ 364
Query: 411 KRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFS 470
+RMFGFVTFV+ ETVK +L KGNPH V +RVLVKPY+EK KV +++ +R E
Sbjct: 365 RRMFGFVTFVHSETVKTVLDKGNPHCVRGSRVLVKPYQEKAKV-----NERKYTDRIEHP 419
Query: 471 PCGTPTGLDSRDPFDLQLGA--RMFYNNTQDMLWRRKME--EQADLQQALELQSRRLMGL 526
C +P +D D +L + R F N+ RR+++ E+ + ++LEL+ R L L
Sbjct: 420 VCYSPHYVD----IDTELNSIPRSFGNHRS---IRRQLQLIEEEEQGRSLELKKRSLAQL 472
>gi|357494859|ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355519053|gb|AET00677.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 547
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 264/548 (48%), Gaps = 93/548 (16%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E TRIVF +IQ +PENA KI+G LLLQD+GE+EM RLA P+ ++ V+ KA +
Sbjct: 1 MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKALQM 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L A NS P P + +P +Q S L ++ +PS + W
Sbjct: 61 L--AVNSTMMPIPPPNVNP---QQGLSHFPALSPSSPLNFQVPS-SYWD----------- 103
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQ 180
PQ+T+ N TG D + E Q Q QL L ++ + L
Sbjct: 104 --PQSTSNANPEF-------TGMNYMDSLVELQKQTQLLSLENHLDHVNTGTRGL----- 149
Query: 181 MDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
+ + NG S + +GG ++ + S+S+ + C YF++G
Sbjct: 150 --VVNEYNNGLDSSAV---NFGGKATKRFSNSSMSE------------FPLKICHYFSKG 192
Query: 241 YCKNGSSCRFVHG---GETGSGNLMGSDGAATL--VGSPSKMEPID-HCHELLRSKSAAA 294
YC++G +CR+ HG E+ S +D + V SP + I+ ELL+ +
Sbjct: 193 YCRHGGNCRYFHGQVPHESFSHMHGNNDNTSNEDPVISPGSLAQIESEIIELLKQRRGNP 252
Query: 295 AQVQ----------QQRLAAASQLMGSSSFPYSPKSMNLFLQQQQND--TQRAAAAAALM 342
+ ++ L A L S S S+ L + + R A++
Sbjct: 253 MSIASLPMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARLNSIRLIDRPHGQHAVV 312
Query: 343 LNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 402
L ED K+ +++ D N SA SRQIYLTFPADSTF EEDV+ YF+ +G V+
Sbjct: 313 LAEDAPKY----IQKGDSVQNISA------SRQIYLTFPADSTFTEEDVAEYFNAFGYVE 362
Query: 403 DVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQ 462
DVRIP QQKRMFGFVTF PETV++IL KGNPH+V +RVLVKPY+EK KV
Sbjct: 363 DVRIPCQQKRMFGFVTFADPETVRMILDKGNPHYVRGSRVLVKPYREKTKV--------- 413
Query: 463 QVERGE--FSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALELQS 520
VER E F PT + L R + N+ L R+ MEEQ +QA ELQ
Sbjct: 414 -VERIESWFVGSYDPTSHGTSIVLRLYSVPRSYGNHRS--LSRQLMEEQ---EQAFELQR 467
Query: 521 RRLMGLQL 528
RRL LQ
Sbjct: 468 RRLAQLQF 475
>gi|224068839|ref|XP_002302838.1| predicted protein [Populus trichocarpa]
gi|222844564|gb|EEE82111.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 231/471 (49%), Gaps = 95/471 (20%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T++V++RIQ ++PE KI+G +L+Q+HGE+EMIRLAF P+ L++++I KA+ +
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWS-TAVTDLPNPD 119
L G N +P L + S + + + V+D+P
Sbjct: 61 L-------------------------------GLNKIPVLNLISPSQVNPSPVSDVPQ-- 87
Query: 120 DLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPS 179
IP +T + + P G S V ++Y++Q+Q+ FL + N D
Sbjct: 88 QFIPNSTVSSHPIFSPVKVRTAGY-SEMVPEDYRIQNQMQFL-ALDDPIEFVNSDF---- 141
Query: 180 QMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFAR 239
+ S ++P RRS S+ + + C YF +
Sbjct: 142 ------------SSSYIYPE-PALSPRTSRRSPSLPE------------FPVKICHYFIK 176
Query: 240 GYCKNGSSCRFVHGGETGSGNLMGSDGA------------ATLVGSPSKME--PIDHCHE 285
G+CK+G++C + E + + S G+ + G P + P+ +
Sbjct: 177 GFCKHGNNCS-SNLNEIANEEFVVSPGSFEKLELELTELLKSRRGVPVSIASLPMMYYEM 235
Query: 286 LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNE 345
R+ A + QR A YS + L+ R +++L E
Sbjct: 236 YGRTLQAEGYLTESQRHGKAG---------YSLTKLLARLKNSIRLIDRPHGQHSVILAE 286
Query: 346 DMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVR 405
D K+ ERND GIV SRQIYLTFPA+STF E+DVSNYFS +GPVQDVR
Sbjct: 287 DFPKYLEYAGERND-----PGGIVA-GSRQIYLTFPAESTFTEQDVSNYFSNFGPVQDVR 340
Query: 406 IPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
IP QQKRMFGFVTFV+ ETVK ILAKGNPH +C ARVLVKPY+EK ++ D+
Sbjct: 341 IPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPYREKSRLIDR 391
>gi|302767304|ref|XP_002967072.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
gi|300165063|gb|EFJ31671.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
Length = 502
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 238/476 (50%), Gaps = 93/476 (19%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YE TR++++R+Q LDP + SKI+G LLLQD E++M+R+A G +AL+ SV+ KA++E
Sbjct: 1 MDPYELTRMLYARVQALDPRHVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L S SPN+ P+PF ++ PP GT++ +
Sbjct: 61 L-GLSPSPNAHF--DHPAPFSRPEH------------PPFHF--GTAFDHQL-------- 95
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLF---- 176
Q+T + P N S V + QLQ Q +N S ++Q LF
Sbjct: 96 ---QSTYHLRDVYHPPLVN------SHVPFQKQLQQQAELMNRPSIQDTYQHQPLFGAGV 146
Query: 177 YPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSD---VLGSSSDDLNSGLGWRP 233
+P+ + + + S H S+S+ SSS NS W+P
Sbjct: 147 FPNDHFYPETFAFLNRNRLKQQKQQQQKSDEHDLMLSLSEHGSPNSSSSSSNNSSHAWKP 206
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSKSA 292
C+Y++RG+CK+GS CRF+H + N +G + G+ S +E ++ ELLR++ +
Sbjct: 207 CVYYSRGHCKHGSGCRFLH-----TPNSLGIEEH----GTESALERLELEIQELLRARKS 257
Query: 293 AAA-----QVQQQRLAAASQLMGSS-SFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNED 346
Q+ + +A + G SP M L +++L+
Sbjct: 258 PVPISLLPQMYFEEFGSALHVDGKPIDLLSSPSCMRL-------------TSSSLL---- 300
Query: 347 MHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 406
NG +V IYLTFPA+S F EEDV+ +FS YGPVQDVRI
Sbjct: 301 --------------RPNGQQAVV-----LIYLTFPAESAFTEEDVNAHFSAYGPVQDVRI 341
Query: 407 PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQ 462
PYQQKRMFGFVTF++ ETVK ILA+GNPH+VC ARVLVKPY++K K DK QQ
Sbjct: 342 PYQQKRMFGFVTFIHAETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKKNADQQ 397
>gi|297847524|ref|XP_002891643.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297337485|gb|EFH67902.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 184/318 (57%), Gaps = 63/318 (19%)
Query: 205 SSVHRRSCSVSDV-LGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMG 263
++ H+RS S +D L S G G+ RF GG L+
Sbjct: 154 ANFHKRSFSANDACLESEEPGFGGGTGYH----------------RFPQGG------LVD 191
Query: 264 SDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNL 323
G++ +GSPS+M+ + E++R K A QQ+R+ AA Q M + S P
Sbjct: 192 DFGSSAGLGSPSEMDYM--LEEMMRMKLA-----QQKRMVAA-QFMAACSSP-------- 235
Query: 324 FLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPAD 383
L +Q + E + F R ER D S+QIYLTFP++
Sbjct: 236 MLHRQ---------GSGHFGEEGGYYFSPGRHERED-----------SVSKQIYLTFPSE 275
Query: 384 STFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
S+F +EDVS YFS +GPV+DVRIPYQQ+RMFGFVTF ETV+ ILA+GNPHF+CD+RVL
Sbjct: 276 SSFTDEDVSTYFSDFGPVEDVRIPYQQQRMFGFVTFAKAETVRTILARGNPHFICDSRVL 335
Query: 444 VKPYKEKGKVPDKYRKQQ--QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDML 501
VKPYKEKGK+ K ++QQ + +ERG +SP +P+ +DSRD ++ +LG RMF N TQ+ML
Sbjct: 336 VKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSRMDSRDLYECRLGPRMFSNKTQEML 395
Query: 502 WRRKMEEQADLQQALELQ 519
R+ EQADLQQA+E++
Sbjct: 396 RRKT--EQADLQQAIEVE 411
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+FS+I+ L+PENASK++G LLQD ++++IR+AFGP++L+ + KA+ +
Sbjct: 1 MDPGDPTSIIFSKIRTLEPENASKVIGYFLLQDMEQRDLIRIAFGPDSLIQTFCRKAKSD 60
Query: 61 LVRASNSPNSP 71
L +SN + P
Sbjct: 61 LGLSSNGFSRP 71
>gi|356499429|ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 541
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 240/496 (48%), Gaps = 99/496 (19%)
Query: 7 TRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASN 66
TRIVF +IQ +PE+A KI+G L Q HGE+EM +LA P+ + V+++A+KEL R +
Sbjct: 6 TRIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKELQRLAA 65
Query: 67 SPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTT 126
P+ + +P L L++ S + ++ +P P PQ+
Sbjct: 66 KPDMLPISRTVNP--------------QQGLSDLSVISPRTPTSPNFQMP-PPYWDPQSA 110
Query: 127 TTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSS 186
+N + G D I E Q Q Q+ L +Q+D +
Sbjct: 111 ANINPDFM-------GMNYLDSIVELQKQTQMLTLE----------------NQIDAVKT 147
Query: 187 PPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLN----SGLGWRPCLYFARGYC 242
G + ++G L +S+ +L S + C YF +G+C
Sbjct: 148 GTGGIAND-----HYG---------------LDASAANLGGRRFSEFPMKMCHYFNKGFC 187
Query: 243 KNGSSCRFVHG-------GETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSA--- 292
K+G+SCRF HG + + + +G D + GS +++E ELLR+K
Sbjct: 188 KHGTSCRFYHGQVVPENFSQMHANDAIGEDQVIS-PGSLAQLE--SEIIELLRAKGGPMS 244
Query: 293 ------AAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ---RAAAAAALML 343
A ++ L A L S S S+ L + +N Q R +++L
Sbjct: 245 IASLPMAYYDKYKKVLQADGYLTESQRHGKSGYSLTKLLARLKNSIQLIGRPHGQHSVVL 304
Query: 344 NEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQD 403
ED +++++ DF+ N SA S QIYLTFPADSTF E+DVSNYF+ +GPV D
Sbjct: 305 AED----SPTQMQKGDFARNISA------SYQIYLTFPADSTFTEDDVSNYFNTFGPVAD 354
Query: 404 VRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQ 463
VRIP QQ+RMFGFVTFV+ ETVK +L KGNPH V +RVLVKPY+EK KV +++
Sbjct: 355 VRIPNQQRRMFGFVTFVHSETVKSVLDKGNPHCVRGSRVLVKPYREKAKV-----NERKY 409
Query: 464 VERGEFSPCGTPTGLD 479
+R E C +P +D
Sbjct: 410 TDRIEHPICYSPHYVD 425
>gi|302755024|ref|XP_002960936.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
gi|300171875|gb|EFJ38475.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
Length = 523
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 238/479 (49%), Gaps = 78/479 (16%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YE TR++++R+Q LDP SKI+G LLLQD E++M+R+A G +AL+ SV+ KA++E
Sbjct: 1 MDPYELTRMLYARVQALDPRYVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNPDD 120
L S SPN+ P+PF ++ PP +STA D
Sbjct: 61 L-GLSPSPNAHF--DHPAPFSRPEH------------PPF------HFSTAF-------D 92
Query: 121 LIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLF---- 176
Q+T + P N S V + QLQ Q +N S ++Q LF
Sbjct: 93 HQLQSTYHLRDVYHPPLVN------SHVPFQKQLQQQAELMNRPSMQDIYQHQPLFGAGV 146
Query: 177 YPSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSD---VLGSSSDDLNSGLGWRP 233
+P+ + + + S H S+S+ SSS NS W+P
Sbjct: 147 FPNDHFYPETFAFLNRNRLKQQKQQQQKSDEHDLMLSLSEHESPNSSSSSSNNSSHAWKP 206
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSKSA 292
C+Y++RG+CK+GS CRF+H + N +G + G+ S +E ++ ELLR++ +
Sbjct: 207 CVYYSRGHCKHGSGCRFLH-----TPNSLGIEEH----GTESALERLELEIQELLRARKS 257
Query: 293 AAA-----QVQQQRLAAASQLMGSSSFPYSPKSMNL--FLQQQQND--TQRAAAAAALML 343
Q+ + +A + G + P + + L L +N + A++L
Sbjct: 258 PVPISLLPQMYFEEFGSALHVDGFLATPEAVQGSGLTSLLCHMKNTLVIDQPNGQQAVVL 317
Query: 344 NEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQD 403
E+ + + +++ NG S F EEDV+ +FS YGPVQD
Sbjct: 318 VEESSRLAVAAHRGDNYDHNGI------------------SAFTEEDVNAHFSAYGPVQD 359
Query: 404 VRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQ 462
VRIPYQQKRMFGFVTF++ ETVK ILA+GNPH+VC ARVLVKPY++K K DK QQ
Sbjct: 360 VRIPYQQKRMFGFVTFIHGETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKKNADQQ 418
>gi|15217946|ref|NP_175563.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325355|gb|AAG52614.1|AC024261_1 unknown protein; 33958-32214 [Arabidopsis thaliana]
gi|20268750|gb|AAM14078.1| unknown protein [Arabidopsis thaliana]
gi|21281143|gb|AAM45048.1| unknown protein [Arabidopsis thaliana]
gi|332194555|gb|AEE32676.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 414
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 159/266 (59%), Gaps = 40/266 (15%)
Query: 259 GNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP 318
G L+ G++ + GSPS+M+ + ++R K A QQ+ A+Q M + P
Sbjct: 187 GGLVDGFGSSGVFGSPSEMDYM--LEGMMRMKLA------QQKSMVAAQFMAACGSPMLH 238
Query: 319 KSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYL 378
+ + E + F + R ER D S+QIYL
Sbjct: 239 RH-----------------GSGHFGEECGNYFSQGRHERED-----------SVSKQIYL 270
Query: 379 TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
TFP++S+F +EDVS YF +G V DVRIPYQQ+RM+GFVTF ETV+ ILA+GNPHF+C
Sbjct: 271 TFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFIC 330
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ--QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNN 496
D+RVLVKPYKEKGK+ K ++QQ + +ERG +SP +P+G DSR+ ++ +LG RMF
Sbjct: 331 DSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGKDSRELYECRLGPRMFSKK 390
Query: 497 TQDMLWRRKMEEQADLQQALELQSRR 522
TQ+ML R+ EQADLQ A+E++ +R
Sbjct: 391 TQEMLRRKT--EQADLQHAIEVELQR 414
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+FS+I+ + ENAS+++ LLQD ++++IR+AFGP++L+ + KA+ +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LVRASNSPNSP 71
L +SN + P
Sbjct: 61 LGFSSNGFSRP 71
>gi|30695000|ref|NP_849792.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194556|gb|AEE32677.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 513
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 170/306 (55%), Gaps = 64/306 (20%)
Query: 259 GNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSP 318
G L+ G++ + GSPS+M+ + ++R K A QQ+ A+Q M + P
Sbjct: 187 GGLVDGFGSSGVFGSPSEMDYM--LEGMMRMKLA------QQKSMVAAQFMAACGSPMLH 238
Query: 319 KSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYL 378
+ + E + F + R ER D S+QIYL
Sbjct: 239 RH-----------------GSGHFGEECGNYFSQGRHERED-----------SVSKQIYL 270
Query: 379 TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
TFP++S+F +EDVS YF +G V DVRIPYQQ+RM+GFVTF ETV+ ILA+GNPHF+C
Sbjct: 271 TFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFIC 330
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ--QQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNN 496
D+RVLVKPYKEKGK+ K ++QQ + +ERG +SP +P+G DSR+ ++ +LG RMF
Sbjct: 331 DSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGKDSRELYECRLGPRMFSKK 390
Query: 497 TQDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPTHSPNIF 556
TQ+ML R+ EQADLQ A+E R+ S G SP+H P F
Sbjct: 391 TQEMLRRKT--EQADLQHAIE--------------------RSPSIG----SPSHFPPRF 424
Query: 557 HQNLVF 562
+ +L+F
Sbjct: 425 NHSLLF 430
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD + T I+FS+I+ + ENAS+++ LLQD ++++IR+AFGP++L+ + KA+ +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LVRASNSPNSP 71
L +SN + P
Sbjct: 61 LGFSSNGFSRP 71
>gi|302785371|ref|XP_002974457.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
gi|300158055|gb|EFJ24679.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
Length = 355
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 138/234 (58%), Gaps = 32/234 (13%)
Query: 231 WRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSK 290
W+PCLYFARGYCK+GS+CR S +L GS +L G ++M ELL +
Sbjct: 137 WKPCLYFARGYCKHGSACR-------SSSDLTGSSMVDSLAGLEAEMR------ELLTGR 183
Query: 291 S-----AAAAQVQQQRLAAASQLMG-------SSSFPYSPKSMNLFLQQQQNDTQRAAAA 338
A+ Q+ ++ + Q G +S + + L+ R
Sbjct: 184 RTPVSIASLPQLYHEKFGKSLQADGYLTESQRHGKAGHSLTKLLIKLRATVTLIDRPHGQ 243
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A++L ED HKF + + SA NP+SRQIYLTFPA+S F EEDV+ +FS +
Sbjct: 244 HAVVLAEDAHKF-------MAYGQDSSAIAANPSSRQIYLTFPAESGFSEEDVTTHFSSF 296
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK 452
GPVQDVRIPYQQKRMFGFVTF Y ETV+ ILA+GNPH++C ARVLVKPYKEKG+
Sbjct: 297 GPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVKPYKEKGR 350
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD EA R V++R+Q LD N KIMG LLLQD EKEM+ LA +++V + + +A++E
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|302808135|ref|XP_002985762.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
gi|300146671|gb|EFJ13340.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
Length = 353
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 138/234 (58%), Gaps = 32/234 (13%)
Query: 231 WRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSK 290
W+PCLYFARGYCK+GS+CR S +L GS +L G +++ ELL +
Sbjct: 135 WKPCLYFARGYCKHGSACR-------SSSDLTGSSMVDSLAGLEAELR------ELLTGR 181
Query: 291 S-----AAAAQVQQQRLAAASQLMG-------SSSFPYSPKSMNLFLQQQQNDTQRAAAA 338
A+ Q+ ++ + Q G +S + + L+ R
Sbjct: 182 RTPVSIASLPQLYHEKFGKSLQADGYLTESQRHGKAGHSLTKLLIKLRATVTLLDRPHGQ 241
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A++L ED HKF + + SA NP+SRQIYLTFPA+S F EEDV+ +FS +
Sbjct: 242 HAVVLAEDAHKF-------MAYGQDSSAIAANPSSRQIYLTFPAESGFSEEDVTTHFSSF 294
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK 452
GPVQDVRIPYQQKRMFGFVTF Y ETV+ ILA+GNPH++C ARVLVKPYKEKG+
Sbjct: 295 GPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEGNPHYICGARVLVKPYKEKGR 348
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD EA R V++R+Q LD N KIMG LLLQD EKEM+ LA +++V + + +A++E
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|218192754|gb|EEC75181.1| hypothetical protein OsI_11409 [Oryza sativa Indica Group]
Length = 221
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/143 (74%), Positives = 117/143 (81%), Gaps = 13/143 (9%)
Query: 396 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 455
SIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPD
Sbjct: 6 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 65
Query: 456 KYRKQQQQVERGEFSPCGTPTGLDSRDPFDL-QLGARMFY--NNTQDMLWRRK---MEEQ 509
K K Q G+FS C TPTGLD RDPFDL QLGARM N+T +M+ RRK ++
Sbjct: 66 K--KHQ-----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQA 118
Query: 510 ADLQQALELQSRRLMGLQLLDVK 532
A+LQQA+EL SRRLM LQLLD+K
Sbjct: 119 AELQQAIELHSRRLMDLQLLDLK 141
>gi|357459965|ref|XP_003600264.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355489312|gb|AES70515.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 539
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 166/319 (52%), Gaps = 47/319 (14%)
Query: 231 WRPCLYFARGYCKNGSSCRFVHGGETGS---GNLMGSDGAATLV-----GSPSKME---- 278
++ C YF++GYC++G+SCRF H G+ S ++ G+D AA GS +++E
Sbjct: 171 FKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDAAANDEQAISPGSLAQLESEIV 230
Query: 279 --------PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQN 330
PI + +Q + A SQ G S Y+ + + L+
Sbjct: 231 DLLKQRGNPISIASLPMAYYDKYKKVLQAEGYLAESQRHGKSG--YNLTKLLIRLRNSIR 288
Query: 331 DTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVN-PASRQIYLTFPADSTFREE 389
R A++L ED KF G A N AS+QIYLTFPADSTF EE
Sbjct: 289 LIDRPHGQHAVVLAEDAPKFM------------GKADCQNISASQQIYLTFPADSTFSEE 336
Query: 390 DVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKE 449
DVSNYF +G V+DVRIP QQ+RMFGFVTFV PETVK+IL KGNPH+V +RVLVKPYKE
Sbjct: 337 DVSNYFGTFGSVEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVRGSRVLVKPYKE 396
Query: 450 KGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQ 509
K K+ D RK +VE C +P D D ++ + L R +EEQ
Sbjct: 397 KPKLID--RKYPYRVEH---HVCYSPRYAD----IDAEIASSPRSCGNPRYLTRLLLEEQ 447
Query: 510 ADLQQALELQSRRLMGLQL 528
+ ELQ RRL LQ+
Sbjct: 448 ---DRIFELQRRRLALLQI 463
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E TRIV +IQ +PE+A+KI+G LL+QD+GE+E+ +LA P+ L+ V LKAR E
Sbjct: 11 MDISECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTE 70
Query: 61 LVRASNSPNSPSTPSSPSPF 80
L + + S SSP+ F
Sbjct: 71 LQKMATRSVISSGNSSPASF 90
>gi|302822034|ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
gi|300139523|gb|EFJ06262.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
Length = 361
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 136/227 (59%), Gaps = 20/227 (8%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSA 292
PCLY+++G+CK G+SCR +GS + + L G + + I +L K
Sbjct: 152 PCLYYSKGHCKRGTSCR---SPSSGSLERLEMELQELLRGRRTPVS-IASLPQLYFEKFG 207
Query: 293 AAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAAAALMLNEDMHK 349
A +Q Q SQ G + S+ L + + R A++L ED +
Sbjct: 208 RA--LQAQGYLTESQRHGKAGC-----SLTKLLARLKGSVALIDRPHGQHAVVLAEDAQR 260
Query: 350 FGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 409
F R +R+D VNP+SRQIYLTFPA+STF E+DVS +F YGPVQDVRIPYQ
Sbjct: 261 FVGYRADRDDLKD------VNPSSRQIYLTFPAESTFTEDDVSAHFRSYGPVQDVRIPYQ 314
Query: 410 QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 456
QKRMFGFVTF+YPETVK IL++GNPH++C ARVLVKPY+EK K+ ++
Sbjct: 315 QKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 361
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEAT++VF+R+Q DPEN SKI+GL+LLQD E+EM RLA G +AL+ S I KAR+E
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|296084999|emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 167/330 (50%), Gaps = 58/330 (17%)
Query: 234 CLYFARGYCKNGSSCRFVHGG----------ETGSGNLMGSDGA---------------- 267
C YF +G+CK+G+SCR+ HG G+ L D
Sbjct: 147 CHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLEKLELELTEL 206
Query: 268 -ATLVGSPSKME--PIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLF 324
+ G P + P+ + + R+ A + QR A YS +
Sbjct: 207 LKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAG---------YSLTKLLAR 257
Query: 325 LQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADS 384
L+ R +++L ED+ K+ ER+D G + +S+QIYLTFPADS
Sbjct: 258 LKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSD------PGAIVGSSKQIYLTFPADS 311
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
TF E+DVSNYF+ +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL KGNPH++C ARVLV
Sbjct: 312 TFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLV 371
Query: 445 KPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRR 504
KPY+EK + V+R + +P +D +LQ R+ +N++ + ++
Sbjct: 372 KPYREKAS--------SRTVDRRQHPMYYSPHFIDEDS--ELQSIPRVC-DNSRLLRKQQ 420
Query: 505 KMEEQADLQQALELQSRRLMGLQLLDVKKH 534
MEE +QALEL+ RRL LQL H
Sbjct: 421 LMEEH---EQALELERRRLSELQLTPKTAH 447
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 13/107 (12%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T++V++RIQ L+PEN SKI+G LLLQDHGE++MIR AF + + +I KA+ E
Sbjct: 14 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73
Query: 61 LVRASN-SPNSPSTP--SSPSP------FLAR----QNSSSSRLLGS 94
L +S + +SP +P +PSP FLA +NS S GS
Sbjct: 74 LGLSSKPAVSSPISPPQVNPSPSMSQIHFLAMEDQLENSVGSEFSGS 120
>gi|77552901|gb|ABA95697.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
Length = 480
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 26/210 (12%)
Query: 344 NEDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
++DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG V
Sbjct: 142 SDDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMV 194
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQ+K MFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K+R
Sbjct: 195 QDVRIPYQEKCMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNKFRHVN 254
Query: 462 QQVERGEFSPCGTPTGLDSRD-PFD--LQLGARMFYNN--TQDMLWRRKMEEQADLQQAL 516
C P + + PF+ + LG R+ Y + + + +R K +EQ Q A
Sbjct: 255 H---------CLIPLRIFAHILPFECYIVLGPRILYRDIASHEASFRMKQDEQ---QHAT 302
Query: 517 ELQSRRLMGLQLLDVKKHHHHRALSTGSPI 546
ELQ LM L LL+++ HH + GS +
Sbjct: 303 ELQRCCLMRLPLLNLQDWGHHLSSPMGSHV 332
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D+ E +MIRLA GP+ L+ S+I K R +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 61 L---TNKPSPP 68
>gi|295913262|gb|ADG57888.1| transcription factor [Lycoris longituba]
Length = 180
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 122/188 (64%), Gaps = 44/188 (23%)
Query: 228 GLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELL 287
G GW+PCL++ RG+CKNGS+CRF+HG D +A+ ++ L+
Sbjct: 31 GFGWKPCLHYQRGFCKNGSACRFLHGPV--------DDISAS----------VEQELMLM 72
Query: 288 RSKSAAAAQVQQQRLAAASQLMGSSSFPYSP------KSMNLFLQQQQNDTQRAAAAAAL 341
RSKS QRLAA++ ++FPYSP K LQQ N++QRAAA A +
Sbjct: 73 RSKS--------QRLAASA-----AAFPYSPTGSSSNKCFKFMLQQ--NESQRAAAVALM 117
Query: 342 MLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
+ +E+ GR+RLER+DF AGIVNP+SRQIYLTFPADSTFREEDVSNYFSIYGPV
Sbjct: 118 LESENQKFMGRARLERSDF-----AGIVNPSSRQIYLTFPADSTFREEDVSNYFSIYGPV 172
Query: 402 QDVRIPYQ 409
QDVRIPYQ
Sbjct: 173 QDVRIPYQ 180
>gi|225460759|ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
gi|297737542|emb|CBI26743.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 166/315 (52%), Gaps = 41/315 (13%)
Query: 234 CLYFARGYCKNGSSCRFVHGG---ETGS--GNLMGSDGAATLVGS-------------PS 275
C YF +G+CK+G++CR++H E S N + +D GS
Sbjct: 165 CHYFNKGFCKHGNNCRYLHAQVFPEVLSPIANDLANDDHIFSPGSIEKLELELTELLKSR 224
Query: 276 KMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQND--TQ 333
+ P+ + +Q + SQ G + + S+ L + +
Sbjct: 225 RGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGY-----SLTKLLARLRTIRLID 279
Query: 334 RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
R +++L ED+ K+ SR ER+D G + SRQIYLTFPA+STF EEDVS+
Sbjct: 280 RPHGQHSVILAEDVPKYMESRSERSD------PGPIVSGSRQIYLTFPAESTFTEEDVSD 333
Query: 394 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKV 453
YFS +G V+DVRIP QQKRMFGFVTF +TVK ILAKG+PH+VC ARVLVKPY+EK +
Sbjct: 334 YFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRT 393
Query: 454 PDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQ 513
D RK ++ E + P +DS +L + R T +L ++ MEEQ +
Sbjct: 394 GD--RKYLEKFESSMYYPLQY-ADMDS----ELHMMPRGM--ETSRLLRKQIMEEQ-EFA 443
Query: 514 QALELQSRRLMGLQL 528
Q LE ++RRL LQL
Sbjct: 444 QDLEFETRRLSKLQL 458
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T +VF+RIQ L+PEN SKI+G LL++ + EMIRLAFGP+ + +I + E
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|147832355|emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
Length = 556
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 167/317 (52%), Gaps = 41/317 (12%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGG---ETGS--GNLMGSDGAATLVGS------------- 273
+ C YF +G+CK+G++CR++H E S N + +D GS
Sbjct: 163 KVCHYFNKGFCKHGNNCRYLHAQVFPEVLSPIANDLANDDHIFSPGSIEKLELELTELLK 222
Query: 274 PSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQND-- 331
+ P+ + +Q + SQ G + + S+ L + +
Sbjct: 223 SRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGY-----SLTKLLARLRTIRL 277
Query: 332 TQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDV 391
R +++L ED+ K+ SR ER+D G + SRQIYLTFPA+STF EEDV
Sbjct: 278 IDRPHGQHSVILAEDVPKYMESRSERSD------PGPIVSGSRQIYLTFPAESTFTEEDV 331
Query: 392 SNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKG 451
S+YFS +G V+DVRIP QQKRMFGFVTF +TVK ILAKG+PH+VC ARVLVKPY+EK
Sbjct: 332 SDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKP 391
Query: 452 KVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQAD 511
+ D RK ++ E + P +DS +L + R T +L ++ MEEQ +
Sbjct: 392 RTGD--RKYSEKFESSMYYPLQY-ADMDS----ELHMMPRGM--ETSRLLRKQIMEEQ-E 441
Query: 512 LQQALELQSRRLMGLQL 528
Q LE ++RRL LQL
Sbjct: 442 FAQDLEFETRRLSKLQL 458
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E+T +VF+RIQ L+PEN SKI+G LL++ + EMIRLAFGP+ + +I + E
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|414873767|tpg|DAA52324.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 485
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 116/174 (66%), Gaps = 28/174 (16%)
Query: 326 QQQQNDTQRAAAAAALMLNEDMHKF-GRS-RLERNDFSINGSAGIVNPASRQIYLTFPAD 383
+++Q T RAA L+ EDMH+F RS R++R D I +PA+RQI
Sbjct: 331 EKKQMATLRAAVGM-LLGGEDMHRFPVRSPRMDRGDL-------ICSPAARQI------- 375
Query: 384 STFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
VSNYFS++GPVQDVRIPYQQK MFGFVTFVY ETVK+I +KGNPHFVC ARVL
Sbjct: 376 -------VSNYFSMFGPVQDVRIPYQQKHMFGFVTFVYAETVKVIPSKGNPHFVCYARVL 428
Query: 444 VKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTPTG-LDSRDPFDLQL--GARMF 493
VKPYKEKGK+P ++RK Q G EF C +PT LD RDP+ L L GA++F
Sbjct: 429 VKPYKEKGKIPGRFRKLQHAHHGGAEFGDCASPTRLLDFRDPYALLLLSGAQVF 482
>gi|449463743|ref|XP_004149591.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
gi|449518519|ref|XP_004166289.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 528
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 136/249 (54%), Gaps = 34/249 (13%)
Query: 232 RPCLYFARGYCKNGSSCRFVHG----GETGSGNLMGSDGAATLVGSPSKMEPID-HCHEL 286
R C Y+ +G+CK+G+SCR++H G S+ V P +E ++ EL
Sbjct: 166 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVEL 225
Query: 287 LRSKSAAAAQV---------------QQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQND 331
L+S+ + + Q + SQ G S F S+ L + +N
Sbjct: 226 LKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGF-----SLTKLLTRLKNS 280
Query: 332 TQ---RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFRE 388
Q R A++L ED KF R +RND G + ++RQIY+TFPADSTF E
Sbjct: 281 IQVIDRPHGQHAVILAEDAPKFMDHRKDRND------PGPIVSSARQIYMTFPADSTFTE 334
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+DVS+YF YG V+DVRIP QQ+RMFGFVTF ETVK+IL+ + H +C ARVLVKPY+
Sbjct: 335 DDVSDYFRQYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYR 394
Query: 449 EKGKVPDKY 457
EK K+ ++Y
Sbjct: 395 EKSKLLERY 403
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 7 TRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASN 66
TR VF RI +DP+N KI+G LLL D+G++EM RLA E+ + V++ A+ EL + +
Sbjct: 7 TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRS 66
Query: 67 SPNSPSTPSSPSPFLARQNSSS 88
P P SP RQ S+S
Sbjct: 67 MP----VPVSPLAIRNRQPSTS 84
>gi|15224480|ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18;
Short=AtC3H18
gi|4755187|gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana]
gi|330250805|gb|AEC05899.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
Length = 536
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 133/242 (54%), Gaps = 31/242 (12%)
Query: 234 CLYFARGYCKNGSSCRFVHG---------GETGSGNLMGSDGAATLVGSPSKMEPID-HC 283
C YF +G+CK+G++CR+ HG + + N SD V SP +E ++
Sbjct: 162 CHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEH--VVSPVSLEKLEGEI 219
Query: 284 HELLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ 333
ELL+ + A + + L A L S + S+ L + +N +
Sbjct: 220 IELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIR 279
Query: 334 ---RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREED 390
R +++L ED KF ERN+ G + SRQIYLTFPA+S+F E D
Sbjct: 280 LVDRPHGQHSVILAEDASKFVEYTGERNE------HGAILAGSRQIYLTFPAESSFTEHD 333
Query: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
VS YF+ YG V+DVRIP QQKRM+GFVTF ETVK ILAKGNPHF+C+ARVLVKPY+EK
Sbjct: 334 VSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREK 393
Query: 451 GK 452
+
Sbjct: 394 SR 395
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
M+ E+ +V +RIQ L+PENA+KI G LLL+Q++G ++MIRLAF P++++ SVI +
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 ELVRASNSPNSPSTPSSPSP 79
EL R S+ +SP + P+P
Sbjct: 61 ELARNSHHYHSPPSDHIPTP 80
>gi|218185150|gb|EEC67577.1| hypothetical protein OsI_34930 [Oryza sativa Indica Group]
Length = 581
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 93/117 (79%), Gaps = 9/117 (7%)
Query: 344 NEDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
++DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG V
Sbjct: 293 SDDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMV 345
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
QDVRIPYQ+KRMFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K+R
Sbjct: 346 QDVRIPYQEKRMFGFVTFTYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNKFR 402
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D+ E +MI LA GP+ L+ S+I K R +
Sbjct: 152 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIHLACGPDNLLQSIIAKVRTD 211
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 212 L---TNKPSPP 219
>gi|222615430|gb|EEE51562.1| hypothetical protein OsJ_32780 [Oryza sativa Japonica Group]
Length = 400
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 105/152 (69%), Gaps = 26/152 (17%)
Query: 344 NEDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
++DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG V
Sbjct: 142 SDDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMV 194
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQ+KRMFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K
Sbjct: 195 QDVRIPYQEKRMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNK----- 249
Query: 462 QQVERGEFSPCGTPTGLD------SRDPFDLQ 487
+F +P+ ++ SR PFDL+
Sbjct: 250 ------KFQQSDSPSYMNHNRLLYSRVPFDLR 275
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D E +MI LA GP+ L+ S+I K R +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 61 L---TNKPSPP 68
>gi|77548504|gb|ABA91301.1| RNA recognition motif, putative [Oryza sativa Japonica Group]
Length = 401
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 105/152 (69%), Gaps = 26/152 (17%)
Query: 344 NEDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPV 401
++DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG V
Sbjct: 142 SDDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMV 194
Query: 402 QDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
QDVRIPYQ+KRMFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K
Sbjct: 195 QDVRIPYQEKRMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNK----- 249
Query: 462 QQVERGEFSPCGTPTGLD------SRDPFDLQ 487
+F +P+ ++ SR PFDL+
Sbjct: 250 ------KFQQSDSPSYMNHNRLLYSRVPFDLR 275
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D E +MI LA GP+ L+ S+I K R +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 61 L---TNKPSPP 68
>gi|218186344|gb|EEC68771.1| hypothetical protein OsI_37303 [Oryza sativa Indica Group]
Length = 430
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 91/116 (78%), Gaps = 9/116 (7%)
Query: 345 EDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 402
+DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG VQ
Sbjct: 143 DDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMVQ 195
Query: 403 DVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
DVRIPYQ+K MFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K+R
Sbjct: 196 DVRIPYQEKCMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNKFR 251
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D+ E +MIRLA GP+ L+ S+I K R +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 61 L---TNKPSPP 68
>gi|222616541|gb|EEE52673.1| hypothetical protein OsJ_35055 [Oryza sativa Japonica Group]
Length = 430
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 91/116 (78%), Gaps = 9/116 (7%)
Query: 345 EDMHKFGRS--RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQ 402
+DM ++ +++++D + N SA RQIYLTFP DS F +EDV NYFS+YG VQ
Sbjct: 143 DDMQEYSSRPPQIDQSDLTNNCSA-------RQIYLTFPPDSIFSKEDVCNYFSMYGMVQ 195
Query: 403 DVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
DVRIPYQ+K MFGFVTF Y +TVK+ILAKGNPH++CDARVLVKPYKEK KVP+K+R
Sbjct: 196 DVRIPYQEKCMFGFVTFAYQKTVKLILAKGNPHYICDARVLVKPYKEKDKVPNKFR 251
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M YEAT++VF+R+Q L+P A I+G+LL +D+ E +MIRLA GP+ L+ S+I K R +
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 LVRASNSPNSP 71
L +N P+ P
Sbjct: 61 L---TNKPSPP 68
>gi|302810669|ref|XP_002987025.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
gi|300145190|gb|EFJ11868.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
Length = 197
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 125/213 (58%), Gaps = 29/213 (13%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSK 290
+PC+Y++RG+CK+GSSCRF H TG G+ SPS +E +D ELL S+
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDHITGDGSSP----------SPSSLERLDRELQELLSSR 50
Query: 291 S-----AAAAQVQQQR----LAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAA 338
+ AA Q+ +R L A L S S ++ L + + R
Sbjct: 51 TSPVSIAALPQLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQ 110
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A++L ED HKF E D S VNP+SRQIYLTFPA+S+F E+DVS +F Y
Sbjct: 111 HAVVLAEDAHKFATFAGEHYDLSG------VNPSSRQIYLTFPAESSFSEDDVSIHFRAY 164
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK 431
GPVQDVRIP+QQKRMFGFVTFVYPETVKI+L++
Sbjct: 165 GPVQDVRIPFQQKRMFGFVTFVYPETVKIVLSE 197
>gi|302807700|ref|XP_002985544.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
gi|300146750|gb|EFJ13418.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
Length = 197
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 124/213 (58%), Gaps = 29/213 (13%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSK 290
+PC+Y++RG+CK+GSSCRF H G G+ SPS +E +D ELL S+
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDHIAGDGSSP----------SPSSLERLDRELQELLSSR 50
Query: 291 S-----AAAAQVQQQR----LAAASQLMGSSSFPYSPKSMNLFLQQQQNDT---QRAAAA 338
+ AA Q+ +R L A L S S ++ L + + R
Sbjct: 51 TSPVSIAALPQLYYERFGRPLQAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQ 110
Query: 339 AALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIY 398
A++L ED HKF E D S VNP+SRQIYLTFPA+S+F E+DVS +F Y
Sbjct: 111 HAVVLAEDAHKFATFAGEHYDLSG------VNPSSRQIYLTFPAESSFSEDDVSTHFRAY 164
Query: 399 GPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK 431
GPVQDVRIP+QQKRMFGFVTFVYPETVKI+L++
Sbjct: 165 GPVQDVRIPFQQKRMFGFVTFVYPETVKIVLSE 197
>gi|115474605|ref|NP_001060899.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|42407705|dbj|BAD08853.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622868|dbj|BAF22813.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|125602052|gb|EAZ41377.1| hypothetical protein OsJ_25894 [Oryza sativa Japonica Group]
gi|215767202|dbj|BAG99430.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 126/245 (51%), Gaps = 24/245 (9%)
Query: 232 RPCLYFARGYCKNGSSCRFVH--------GGETGSGNLMGSDGAATLVGSPSKMEPIDHC 283
RPC YF++G CKNG +C + H G +G++ GS +E
Sbjct: 215 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE--MEI 272
Query: 284 HELLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQ--QQND 331
ELL S+ + + L A L S + S+ L + +
Sbjct: 273 TELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 332
Query: 332 TQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDV 391
+R +++L ED K+ R + G V +S QIYLTFPA+STF E+DV
Sbjct: 333 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGD--TGSVPASSHQIYLTFPAESTFAEDDV 390
Query: 392 SNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKG 451
+NYF YGPV+DVRIP Q++RMFGFV+F PETV IL + NPHF+C +RVLVKPY+EK
Sbjct: 391 ANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKS 450
Query: 452 KVPDK 456
K D+
Sbjct: 451 KCVDR 455
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M+ E ++ F+R+Q ++PE+ KI G++LL++ E E+++LA+GPEA + + I +
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LV 62
L
Sbjct: 61 LT 62
>gi|125560003|gb|EAZ05451.1| hypothetical protein OsI_27665 [Oryza sativa Indica Group]
Length = 607
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 126/245 (51%), Gaps = 24/245 (9%)
Query: 232 RPCLYFARGYCKNGSSCRFVH--------GGETGSGNLMGSDGAATLVGSPSKMEPIDHC 283
RPC YF++G CKNG +C + H G +G++ GS +E
Sbjct: 218 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE--MEI 275
Query: 284 HELLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQ--QQND 331
ELL S+ + + L A L S + S+ L + +
Sbjct: 276 TELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 335
Query: 332 TQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDV 391
+R +++L ED K+ R + G V +S QIYLTFPA+STF E+DV
Sbjct: 336 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGD--TGSVPASSHQIYLTFPAESTFAEDDV 393
Query: 392 SNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKG 451
+NYF YGPV+DVRIP Q++RMFGFV+F PETV IL + NPHF+C +RVLVKPY+EK
Sbjct: 394 ANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKS 453
Query: 452 KVPDK 456
K D+
Sbjct: 454 KCVDR 458
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M+ E ++ F+R+Q ++PE+ KI G++LL++ E E+++LA+GPEA + + I +
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 LV 62
L
Sbjct: 61 LT 62
>gi|357115916|ref|XP_003559731.1| PREDICTED: zinc finger CCCH domain-containing protein 54-like
[Brachypodium distachyon]
Length = 552
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 158/330 (47%), Gaps = 60/330 (18%)
Query: 230 GWRPCLYFARGYCKNGSSCRFVHG---GETGSGNLMGSDGAATLVGSPSKMEPIDHCHEL 286
G RPC YF +G CKNG +C + H + + + +G T GS ++E EL
Sbjct: 171 GRRPCHYFFKGICKNGQNCHYSHHQVYADMDHQHHLQGNGGGTTPGSLERLEV--EITEL 228
Query: 287 LRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQ--QQNDTQR 334
L S+ + + L A L S + S+ L + + +R
Sbjct: 229 LHSRRGQPVSIASLPTLYGEMYGKGLQADGYLTESQRHGKAGYSLTKLLSRLNKIRVIER 288
Query: 335 AAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNY 394
+++L ED K+ R +R G + +S QIYLTFP+DS+F E+DV+NY
Sbjct: 289 PHGQHSVVLAEDAAKYTDCRSDR--------GGDMPASSNQIYLTFPSDSSFTEDDVANY 340
Query: 395 FSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVP 454
F YGPV+DVRIP Q +RMFGFV+F PETV +L + NPHF+C +RVL KPY+EK K
Sbjct: 341 FGQYGPVRDVRIPCQDQRMFGFVSFQNPETVTTLLTRRNPHFICGSRVLAKPYREKTKCI 400
Query: 455 DKY----------------RKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQ 498
++ +K+++++ +F P DS
Sbjct: 401 NERSSIEVVYKVRPSLSLPQKEEKKLHPHQFWLTDLPAEYDS------------------ 442
Query: 499 DMLWRRKMEEQADLQQALELQSRRLMGLQL 528
L R+++ E+ D + LEL+ R L GL++
Sbjct: 443 PRLARKQLVEKRD-NRLLELERRHLAGLRV 471
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M+ E T++VFSR+Q +DP+N KI+G +LL++ E M++LA+GP+A + + ++ A+
Sbjct: 1 MESAELTKLVFSRVQKVDPDNVCKIVGCILLREPDEDSMVQLAYGPDATLVATVVDAKAT 60
Query: 61 LV 62
L
Sbjct: 61 LA 62
>gi|205688239|sp|Q6ZK57.2|C3H54_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 54;
Short=OsC3H54
Length = 653
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 126/245 (51%), Gaps = 24/245 (9%)
Query: 232 RPCLYFARGYCKNGSSCRFVH--------GGETGSGNLMGSDGAATLVGSPSKMEPIDHC 283
RPC YF++G CKNG +C + H G +G++ GS +E
Sbjct: 264 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE--MEI 321
Query: 284 HELLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQ--QQND 331
ELL S+ + + L A L S + S+ L + +
Sbjct: 322 TELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRV 381
Query: 332 TQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDV 391
+R +++L ED K+ R + G V +S QIYLTFPA+STF E+DV
Sbjct: 382 IERPHGQHSVVLAEDAAKYMDFRGGGGGGGGD--TGSVPASSHQIYLTFPAESTFAEDDV 439
Query: 392 SNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKG 451
+NYF YGPV+DVRIP Q++RMFGFV+F PETV IL + NPHF+C +RVLVKPY+EK
Sbjct: 440 ANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKS 499
Query: 452 KVPDK 456
K D+
Sbjct: 500 KCVDR 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
M+ E ++ F+R+Q ++PE+ KI G++LL++ E E+++LA+GPEA + + I +
Sbjct: 50 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109
Query: 61 LV 62
L
Sbjct: 110 LT 111
>gi|212275268|ref|NP_001130674.1| uncharacterized protein LOC100191777 [Zea mays]
gi|194689800|gb|ACF78984.1| unknown [Zea mays]
Length = 259
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 97/131 (74%), Gaps = 16/131 (12%)
Query: 413 MFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGE--FS 470
MFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPDKYRKQQ Q ER FS
Sbjct: 1 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS 60
Query: 471 PCGTPTGLDSRD-PFDL-QLGARMFY--NNTQDMLWRRK-----MEEQADLQQALELQSR 521
GLD R+ DL QLGARM ++ +ML RRK A+LQQA+ELQSR
Sbjct: 61 -----NGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSR 115
Query: 522 RLMGLQLLDVK 532
RLM LQLLD+K
Sbjct: 116 RLMRLQLLDLK 126
>gi|413922880|gb|AFW62812.1| putative cytochrome P450 superfamily protein [Zea mays]
Length = 944
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 80/103 (77%), Gaps = 4/103 (3%)
Query: 401 VQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ 460
+QDVRIPYQQKRMFGFVTFVY ETVK+IL+KGNPHFVCDARVLVKPYKEKGKVP ++RK
Sbjct: 636 LQDVRIPYQQKRMFGFVTFVYAETVKVILSKGNPHFVCDARVLVKPYKEKGKVPGRFRKL 695
Query: 461 QQQVERG-EFSPCGTPTG-LDSRDPFDLQL--GARMFYNNTQD 499
Q G EF C +PTG LDSRDP+ L L GA+ + D
Sbjct: 696 QHTHHGGAEFVGCASPTGLLDSRDPYALLLLSGAQNLFTAGTD 738
>gi|413957279|gb|AFW89928.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 381
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 125/241 (51%), Gaps = 34/241 (14%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKS 291
RPC YF +G CKNG SC + H + A G+ K+E ELL+S+
Sbjct: 128 RPCHYFIKGICKNGQSCHYSHHRQE----------AQVCSGALEKLEL--EIIELLKSRH 175
Query: 292 AAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDT--QRAAAAA 339
+ + L A L S + S++ + + T +R
Sbjct: 176 GQPLSIASLPTLYGDRYGKSLKADGYLTESKRHGKAGYSLSRLISRLSKITTIERPHGQH 235
Query: 340 ALMLNEDMHKFGR--SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSI 397
++L ED ++ SR ER G + +S Q+YLTFP++STF EEDV+NYF +
Sbjct: 236 YVVLAEDAGRYKELMSRGER--------GGDMGSSSHQVYLTFPSESTFMEEDVANYFGL 287
Query: 398 YGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKY 457
YG V+DVRIP+Q+KRMFGFV+F PETV IL PHF+ ++RVLVK Y EK K ++Y
Sbjct: 288 YGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIERY 347
Query: 458 R 458
R
Sbjct: 348 R 348
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E + R++ ++PENASKI+G +LL++ ++M++LA+G +A VH+ I A+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|226500396|ref|NP_001140295.1| uncharacterized protein LOC100272340 [Zea mays]
gi|194698886|gb|ACF83527.1| unknown [Zea mays]
gi|413957280|gb|AFW89929.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 472
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 136/273 (49%), Gaps = 36/273 (13%)
Query: 200 YWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSG 259
Y GGG + + + G L+S RPC YF +G CKNG SC + H +
Sbjct: 98 YSGGGCYYASENALIYNGGGPPRSRLSST--RRPCHYFIKGICKNGQSCHYSHHRQE--- 152
Query: 260 NLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQ----------QRLAAASQLM 309
A G+ K+E ELL+S+ + + L A L
Sbjct: 153 -------AQVCSGALEKLE--LEIIELLKSRHGQPLSIASLPTLYGDRYGKSLKADGYLT 203
Query: 310 GSSSFPYSPKSMNLFLQQQQNDT--QRAAAAAALMLNEDMHKFGR--SRLERNDFSINGS 365
S + S++ + + T +R ++L ED ++ SR ER
Sbjct: 204 ESKRHGKAGYSLSRLISRLSKITTIERPHGQHYVVLAEDAGRYKELMSRGER-------- 255
Query: 366 AGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETV 425
G + +S Q+YLTFP++STF EEDV+NYF +YG V+DVRIP+Q+KRMFGFV+F PETV
Sbjct: 256 GGDMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETV 315
Query: 426 KIILAKGNPHFVCDARVLVKPYKEKGKVPDKYR 458
IL PHF+ ++RVLVK Y EK K ++YR
Sbjct: 316 NTILTMRIPHFIGESRVLVKRYIEKSKCIERYR 348
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E + R++ ++PENASKI+G +LL++ ++M++LA+G +A VH+ I A+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|302770004|ref|XP_002968421.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
gi|300164065|gb|EFJ30675.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
Length = 204
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 117/218 (53%), Gaps = 36/218 (16%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK-----MEPID-HCHE 285
+PC+YFA+G+CKNGSSCRF+H D A SP K ME ++ E
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH------------DSALLQSDSPPKDQFLSMERLEFQLQE 52
Query: 286 LLRSKSAAAAQV---------QQQRLAAASQLMGSSSFPYSPK-SMNLFLQQQQNDT--Q 333
LLRS+ V + R A + S P ++ L + Q+ T +
Sbjct: 53 LLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPSYTLTKLLSKFQSVTVVE 112
Query: 334 RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
R ALML ED+ K+ +++ ++ +P SRQIYLTFP DS F EEDV+
Sbjct: 113 RPHRQHALMLAEDVPKYSAHKVDLDE------CNDPSPCSRQIYLTFPCDSNFSEEDVAT 166
Query: 394 YFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK 431
+F YGPV+DVRIP Q KRMFGFVTF Y ETV++ILA+
Sbjct: 167 HFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILAE 204
>gi|413957281|gb|AFW89930.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 433
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 128/261 (49%), Gaps = 51/261 (19%)
Query: 200 YWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSG 259
Y GGG + + + G L+S RPC YF +G CKNG SC + H +
Sbjct: 98 YSGGGCYYASENALIYNGGGPPRSRLSST--RRPCHYFIKGICKNGQSCHYSHHRQE--- 152
Query: 260 NLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPK 319
A G+ K+E ELL+S+ Q +A+ L G
Sbjct: 153 -------AQVCSGALEKLE--LEIIELLKSRHG-----QPLSIASLPTLYGD-------- 190
Query: 320 SMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGR--SRLERNDFSINGSAGIVNPASRQIY 377
R ++L ED ++ SR ER G + +S Q+Y
Sbjct: 191 --------------RPHGQHYVVLAEDAGRYKELMSRGER--------GGDMGSSSHQVY 228
Query: 378 LTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFV 437
LTFP++STF EEDV+NYF +YG V+DVRIP+Q+KRMFGFV+F PETV IL PHF+
Sbjct: 229 LTFPSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFHNPETVNTILTMRIPHFI 288
Query: 438 CDARVLVKPYKEKGKVPDKYR 458
++RVLVK Y EK K ++YR
Sbjct: 289 GESRVLVKRYIEKSKCIERYR 309
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD E + R++ ++PENASKI+G +LL++ ++M++LA+G +A VH+ I A+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|297816588|ref|XP_002876177.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322015|gb|EFH52436.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 116/218 (53%), Gaps = 21/218 (9%)
Query: 232 RPCLYFARGYCKNGSSCR-FVHGGETGSGNLMGSDGAATLV---GSPSKME--PIDHCHE 285
+ C YF +G+CK+G++C H S + + L G+P + P+ + +
Sbjct: 150 KICHYFNKGFCKHGNNCSDEEHVVSAVSLEKLEREIIYLLKSRRGAPISIASLPMMYYEK 209
Query: 286 LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNE 345
R+ A + QR A YS + + L+ R +++L E
Sbjct: 210 YGRTLQAEGYLTESQRHGKAG---------YSLTKLLVRLKNTIRLIDRPHGQHSVILAE 260
Query: 346 DMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVR 405
D+ KF E+++ G + SRQIYLTFPA+S+F E DVSNYFS GPV+DVR
Sbjct: 261 DVLKFVEYTGEKSE------HGAILAGSRQIYLTFPAESSFTEHDVSNYFSKVGPVEDVR 314
Query: 406 IPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
IP QQKRMFGF TF Y E VK ILAKGNPHFVC ARVL
Sbjct: 315 IPCQQKRMFGFETFAYTEDVKHILAKGNPHFVCGARVL 352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 10 VFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASNSP 68
V +RIQ L+PENA KI+G LLL+Q H +++MIRLAF P++++ S+I + EL S+
Sbjct: 4 VQNRIQQLEPENALKIIGYLLLMQHHNDRDMIRLAFCPDSVMRSMINCVKYELANNSHCD 63
Query: 69 NSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP--DDLIPQTT 126
S F + SS+ LL S + PP + GTS+ D+ + +++ P+ +
Sbjct: 64 IPTSDHIQVRKFGSFTGSSNQSLLVSIS-PPSVLSMGTSFWENTNDMDSSLQNNVYPEFS 122
Query: 127 TTMNS 131
T+ S
Sbjct: 123 TSFFS 127
>gi|302774330|ref|XP_002970582.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
gi|300162098|gb|EFJ28712.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
Length = 205
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 112/221 (50%), Gaps = 41/221 (18%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSK-----MEPID-HCHE 285
+PC+YFA+G+CKNGSSCRF+H D A SP K ME ++ E
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH------------DSALLQSDSPPKDQFLSMERLEFQLQE 52
Query: 286 LLRSKSAAAAQV---------------QQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQN 330
LLRS+ V + + SQ + + NL+
Sbjct: 53 LLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPGYTLTKLLSNLY--HFFL 110
Query: 331 DTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREED 390
R ALML ED+ K+ +++ ++ +P SRQIYLTFP DS F EED
Sbjct: 111 SFPRPHRQHALMLAEDVPKYSAHKVDLDE------CNDPSPCSRQIYLTFPCDSNFSEED 164
Query: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK 431
V+ +F YGPV+DVRIP Q KRMFGFVTF Y ETV++ILA+
Sbjct: 165 VATHFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILAE 205
>gi|297835822|ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331633|gb|EFH62052.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 121/240 (50%), Gaps = 39/240 (16%)
Query: 234 CLYFARGYCKNGSSCRFVHGG---ETGSGNLM----GSDGAATLVGSPSKMEPID-HCHE 285
C YF +G+CK+G++CR+ HG E S LM + V SP +E ++ E
Sbjct: 162 CHYFNKGFCKHGNNCRYFHGQIIPERESFALMFNPNNNLSEEEHVVSPVSLEKLEGEIIE 221
Query: 286 LLRSKSAAAAQVQQ----------QRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ-- 333
LL+++ A + + L A L S + S+ L + +N +
Sbjct: 222 LLKARRGAPISIASLPMMYSETYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLI 281
Query: 334 -RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVS 392
R +++L ED KF ERN+ G + SRQIYLTFPA+S+F E DVS
Sbjct: 282 DRPHGQHSVILAEDASKFVEYTGERNE------HGAILAGSRQIYLTFPAESSFTEHDVS 335
Query: 393 NYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK 452
P D+ MFGFVTF ETVK+ILAKGNPHF+C ARVLVKPY+EK +
Sbjct: 336 TTL----PHSDI--------MFGFVTFACTETVKLILAKGNPHFICGARVLVKPYREKSR 383
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
M+ E+ +V +RIQ L+PENASKI+G LLL+QD+G ++MIRLAF P++++ SVI +
Sbjct: 1 MNFTESMNVVHNRIQQLEPENASKIIGYLLLMQDNGNRDMIRLAFCPDSVMRSVINCVKY 60
Query: 60 ELVRASNSPNSPSTPSSPS 78
EL + ++ +SP + P+
Sbjct: 61 ELAKNAHHYHSPPSDHIPT 79
>gi|15231722|ref|NP_190866.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|7529722|emb|CAB86902.1| putative protein [Arabidopsis thaliana]
gi|332645500|gb|AEE79021.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 381
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 114/220 (51%), Gaps = 43/220 (19%)
Query: 232 RPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELLRSK 290
+ C YF +G+CK+G++C NL + V SP +E ++ ELL+S+
Sbjct: 168 KICHYFNKGFCKHGNNCH---------NNLSDEEH----VVSPGSLEKLEREIIELLKSR 214
Query: 291 SAAAAQV---------------QQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQ-- 333
A + Q + SQ G + F S+ L + +N +
Sbjct: 215 RGAPISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGF-----SLTKLLARLKNTIRLI 269
Query: 334 -RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVS 392
R +++L ED+ KF ER++ G + SRQ+YLTFPA+S+F E DVS
Sbjct: 270 DRPHGQHSVILAEDVSKFVEYTGERSE------HGAILAGSRQVYLTFPAESSFTEHDVS 323
Query: 393 NYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 432
NYFS GPV+DVRIP QQKRM+GFVTFVY ETVK ILAK
Sbjct: 324 NYFSEVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAKA 363
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMG-LLLLQDHGEKEMIRLAFGPEALVHSVILKARK 59
M+ EA +V +RI L+PENASKI+G LLL+QD +++MIRLAF P++++ S+I +
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 60 ELVRASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDL 115
EL + S+ N PS+ + SS++ L + PP + GTS+ D+
Sbjct: 61 ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSMGTSFWENTNDM 116
>gi|449532871|ref|XP_004173401.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like,
partial [Cucumis sativus]
Length = 156
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD YEA+RIVFSRIQNLDPENASKIMGLLL+QDHGEKEMIRLAFGPEAL+HSVILKA+K+
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|125600867|gb|EAZ40443.1| hypothetical protein OsJ_24897 [Oryza sativa Japonica Group]
Length = 432
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 9/100 (9%)
Query: 372 ASRQIYLTFPADSTFREEDVSNYFSI---------YGPVQDVRIPYQQKRMFGFVTFVYP 422
S QIY+TFP S F ++DV NYF +GPV VRIPYQ+KRMFGFV+F+Y
Sbjct: 279 GSNQIYMTFPVHSKFTDDDVENYFKYCLNFIVTRQFGPVSGVRIPYQEKRMFGFVSFLYT 338
Query: 423 ETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQ 462
ETV++IL+KG HF+C RVLVK Y EK ++ YRK +Q
Sbjct: 339 ETVRLILSKGTAHFICGLRVLVKRYMEKSELRKIYRKNKQ 378
>gi|75328302|sp|Q84ZT0.1|C3H51_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
51; Short=OsC3H51
gi|27817837|dbj|BAC55605.1| RRM-containing protein-like [Oryza sativa Japonica Group]
Length = 513
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 63/82 (76%)
Query: 372 ASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK 431
S QIY+TFP S F ++DV NYF +GPV VRIPYQ+KRMFGFV+F+Y ETV++IL+K
Sbjct: 323 GSNQIYMTFPVHSKFTDDDVENYFKQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSK 382
Query: 432 GNPHFVCDARVLVKPYKEKGKV 453
G HF+C RVLVK Y EK ++
Sbjct: 383 GTAHFICGLRVLVKRYMEKSEL 404
>gi|125558949|gb|EAZ04485.1| hypothetical protein OsI_26636 [Oryza sativa Indica Group]
Length = 432
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 69/100 (69%), Gaps = 9/100 (9%)
Query: 372 ASRQIYLTFPADSTFREEDVSNYFSI---------YGPVQDVRIPYQQKRMFGFVTFVYP 422
S QIY+TFP S F ++DV NYF +GPV VRIPYQ+KRMFGFV+F+Y
Sbjct: 279 GSNQIYMTFPVHSKFTDDDVENYFKYCLNFIVTRQFGPVSGVRIPYQEKRMFGFVSFLYT 338
Query: 423 ETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQ 462
ETV++IL+KG HF+C +RVLVK Y EK ++ YRK +Q
Sbjct: 339 ETVRLILSKGTAHFICGSRVLVKRYMEKPELRKIYRKNKQ 378
>gi|297847526|ref|XP_002891644.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
gi|297337486|gb|EFH67903.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 27/197 (13%)
Query: 360 FSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTF 419
F + G G + R I F D +++ +GPV DVRIP Q++RMFGFVTF
Sbjct: 163 FGVEGGFGSPSEQKRMIAPLFMGDFGSPMSNIN-----FGPVVDVRIPNQERRMFGFVTF 217
Query: 420 VYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLD 479
ETV +LA+GN H + ++ ++ Q +ER +G+D
Sbjct: 218 ANAETVTTVLAQGNSHLIGES---------------AQQQLNQLLERENLLHHPRLSGMD 262
Query: 480 SRDPFDLQLGARMFYNNTQDMLWRRKMEEQADLQQALEL--QSRRLMGLQLLDVKK---H 534
RD + + G MF N TQ+M RR + QADLQQA+E+ Q RRL+ L+L D++ H
Sbjct: 263 PRDQDESRFGPMMFRNPTQEMRQRRNV--QADLQQAIEVEDQRRRLLNLKLPDMENKSIH 320
Query: 535 HHHRALSTGSPIPSPTH 551
HH R+ S SP P+
Sbjct: 321 HHQRSPSIASPAHFPSQ 337
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
MD T + RI L+PENA KI+G LLQD + ++I+LAFG + R E
Sbjct: 1 MDPGGPTATIIERIITLEPENAFKIIGYFLLQDIEDCDLIQLAFGTDQ------SSPRNE 54
Query: 61 LVRASNSPNSPSTPS 75
+ S +PN P +PS
Sbjct: 55 FLDFSRNPN-PLSPS 68
>gi|242033307|ref|XP_002464048.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
gi|241917902|gb|EER91046.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
Length = 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 151/280 (53%), Gaps = 66/280 (23%)
Query: 119 DDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYP 178
DDL+ N+ PF+ G ++DE QLQ+QL+FLN+++ + +Q +
Sbjct: 64 DDLM-SPAAGGNAPPSPFFAAG-----DPLLDELQLQEQLAFLNDAAAD----HQLPLFD 113
Query: 179 SQMDLSSSPPNGATDSMLFPSYWGGGSSV-----HRRSCSVSDVLGSSSDDLNSGLGWRP 233
+ + S GA D+ F Y G G + HRRS SVS++ S+D GLGW+P
Sbjct: 114 AASECRSP---GAGDATGFFPYGGLGWANGGGPGHRRSSSVSELCLGSAD----GLGWKP 166
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPID-HCHELL-RSKS 291
CLY+ARGYCKNGS+CRFVHGG D A TL G+ ++ C ++L RSKS
Sbjct: 167 CLYYARGYCKNGSACRFVHGGLP--------DDATTLAGAKMDTTTLEQQCQDILFRSKS 218
Query: 292 AAAAQVQQQRLAAASQLMGSSSFPYSP------------KSMNLFLQQQQNDTQR---AA 336
QRLAAA+ +++FPYSP K ++L LQQQQN+ QR A
Sbjct: 219 --------QRLAAAA----AAAFPYSPTDSLPGSPSAATKCLSLLLQQQQNENQRAAAAT 266
Query: 337 AAAALML-NEDMHKF-GRSRLERNDFSINGSAGIVNPASR 374
AAALML +D HKF GR RL+ D A ++NP SR
Sbjct: 267 TAAALMLGGDDAHKFSGRPRLDCADL-----ASMMNPGSR 301
>gi|334183229|ref|NP_001185197.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194558|gb|AEE32679.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 403
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 94/204 (46%), Gaps = 46/204 (22%)
Query: 360 FSINGSAGIVNPASRQIYLTFPAD-------STFREEDVSNYFSIYGPVQDVRIPYQQKR 412
F I G G + R I F D +F ++ VS YF +GPV VRIP Q+++
Sbjct: 153 FGIEGGFGSPSEQQRMIAPQFMGDFGSRMSNISFTDQHVSTYFGNFGPVLSVRIPNQKEQ 212
Query: 413 MFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPC 472
++GFV+F ETV IL + NPH + ++ V V +
Sbjct: 213 VYGFVSFANAETVTTILDQENPHLIGESPVNV-------------------------TAA 247
Query: 473 GTPTGLDSRDPFDLQLG-------ARMFYNNTQDMLWRRKMEEQADLQQALEL--QSRRL 523
T G+ R+PF + G R F N T +ML R EQAD QQA+E+ Q RRL
Sbjct: 248 ATTAGVGWREPFSVGNGPKGAMSRPRRFRNETHEMLQRNT--EQADPQQAIEVEDQIRRL 305
Query: 524 MGLQLLDVKK---HHHHRALSTGS 544
LQL ++ HHH + S GS
Sbjct: 306 SNLQLPGMENKSIHHHQPSPSIGS 329
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 5 EATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGP 46
+A + RI L+PE+A KI+G +L QD G E+IRLAF P
Sbjct: 5 DAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|224055307|ref|XP_002298472.1| predicted protein [Populus trichocarpa]
gi|222845730|gb|EEE83277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 138 GNGTGSGSSDVID---EYQLQDQLSFLNE-SSQNLGNKNQDLFYPSQMDLSSSPPNGATD 193
G+G G S+ +D EY L D L FL+ SS+N G F ++ L P
Sbjct: 76 GSGGGDCSNSSVDFPGEYPLDDYLLFLDGPSSKNKG------FMDHKVQLGGYP------ 123
Query: 194 SMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHG 253
G S +HRR S SDV + D G++PCL FARG+CKNG C+FVHG
Sbjct: 124 ------VANGDSHLHRRRFSESDVCFGAED------GYKPCLNFARGFCKNGEGCKFVHG 171
Query: 254 GETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLA 303
GE N++ +G LVGSP +ME + + AA Q QQQRLA
Sbjct: 172 GE----NIVEVNGGGVLVGSPREMEEHYLQQQEEMTIMKAAQQHQQQRLA 217
>gi|242050694|ref|XP_002463091.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
gi|241926468|gb|EER99612.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
Length = 211
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%)
Query: 373 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 432
S QI++ F S F EEDV +YFS YG V +VRIP Q KRM+GFV+F P T + IL++
Sbjct: 73 SNQIFVVFMPGSKFTEEDVHSYFSQYGTVSNVRIPPQGKRMYGFVSFQDPGTAERILSER 132
Query: 433 NPHFVCDARVLVKPYKEKGKV 453
PHF+C RV VK YK+K ++
Sbjct: 133 TPHFICGDRVCVKAYKDKDEL 153
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 7/56 (12%)
Query: 398 YGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAK---GNPHFVCDARVLVKPYKEK 450
YGPV DVR +KRMFG+V+F +PETVK IL++ HF+C V V+PY+EK
Sbjct: 156 YGPVNDVR----KKRMFGYVSFKHPETVKRILSERCLRTSHFICGDHVFVEPYREK 207
>gi|414878425|tpg|DAA55556.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 430
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTPTG-LDSRDPFDLQL 488
+GNPHFVCD RVLVKPYKEKGKVP ++RK Q G EF+ C +PTG LDSRDP+ L L
Sbjct: 361 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 420
Query: 489 --GARMF 493
GA++F
Sbjct: 421 LSGAQVF 427
>gi|357116531|ref|XP_003560034.1| PREDICTED: putative zinc finger CCCH domain-containing protein
51-like [Brachypodium distachyon]
Length = 522
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Query: 375 QIYLTFPADSTFR--EEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKG 432
+IY+TF A+ R E VSNYFS YGPV VR+P R+ GFVTF YP+TV+++L +
Sbjct: 247 KIYITFTAEGRARCTESLVSNYFSQYGPVLKVRMP--TPRLCGFVTFQYPQTVELLLFEW 304
Query: 433 NP---HFVCDARVLVKPYKEKGK 452
NP HF+C A VLVKPYK G+
Sbjct: 305 NPQVPHFICGATVLVKPYKHSGE 327
>gi|413948586|gb|AFW81235.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 265
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
Query: 431 KGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTPTG-LDSRDPFDLQL 488
+GNPHFVCD RVLVKPYKEKGKVP ++RK Q G EF+ C +PTG LDSRDP+ L L
Sbjct: 196 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 255
Query: 489 --GARMF 493
GA++F
Sbjct: 256 LSGAQVF 262
>gi|15217947|ref|NP_175564.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325375|gb|AAG52634.1|AC024261_21 hypothetical protein; 30893-28595 [Arabidopsis thaliana]
gi|332194557|gb|AEE32678.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 391
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 360 FSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTF 419
F I G G + R I F D R +++ +GPV VRIP Q+++++GFV+F
Sbjct: 153 FGIEGGFGSPSEQQRMIAPQFMGDFGSRMSNIN-----FGPVLSVRIPNQKEQVYGFVSF 207
Query: 420 VYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLD 479
ETV IL + NPH + ++ V V + T G+
Sbjct: 208 ANAETVTTILDQENPHLIGESPVNV-------------------------TAAATTAGVG 242
Query: 480 SRDPFDLQLG-------ARMFYNNTQDMLWRRKMEEQADLQQALEL--QSRRLMGLQLLD 530
R+PF + G R F N T +ML R EQAD QQA+E+ Q RRL LQL
Sbjct: 243 WREPFSVGNGPKGAMSRPRRFRNETHEMLQRNT--EQADPQQAIEVEDQIRRLSNLQLPG 300
Query: 531 VKK---HHHHRALSTGS 544
++ HHH + S GS
Sbjct: 301 MENKSIHHHQPSPSIGS 317
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 5 EATRIVFSRIQNLDPENASKIMGLLLLQDHGEKEMIRLAFGP 46
+A + RI L+PE+A KI+G +L QD G E+IRLAF P
Sbjct: 5 DAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP 46
>gi|414887324|tpg|DAA63338.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 141
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 372 ASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRM-FGFVTFVYPETVKIILA 430
AS +I++TF F V YFS YG V +V IP QKR FGFV+F+ E+VK IL+
Sbjct: 15 ASNKIFITFNCIHIFTHTSVQKYFSQYGTVNEVIIPIMQKRPDFGFVSFLDSESVKQILS 74
Query: 431 KGNPHFVCDARVLVKPYKEK 450
+ PHF+C V VK Y+EK
Sbjct: 75 ERGPHFICGNEVHVKAYREK 94
>gi|413956467|gb|AFW89116.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 31/181 (17%)
Query: 332 TQRAAAAAALMLNEDMHKF-GRS-RLERNDFSINGSAGIVNPASRQI---YLTFPADSTF 386
+ R A L+ EDMH+F RS R++R+D I +PA+RQI Y +P +
Sbjct: 178 SDRGATVGMLLGGEDMHRFPVRSPRMDRDDL-------IRSPAARQIVSNYFGYPEHTPP 230
Query: 387 REEDVSNYFSIYGPVQDVRIP---YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDA--- 440
+ F + + +P + ++ + V +P + + + D
Sbjct: 231 LLAPLLRLFRFVSTSRSITLPRHRWTEQHVRADVGRAHPVPAEAHVRLRHLRVRRDGEGH 290
Query: 441 -----------RVLVKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTPTG-LDSRDPFDLQ 487
R LVKPYKEKGKVP ++RK Q G EF+ C +PTG LDSRDP+ L
Sbjct: 291 PEQGQPALRVRRALVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALL 350
Query: 488 L 488
L
Sbjct: 351 L 351
>gi|414887325|tpg|DAA63339.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 439
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 375 QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNP 434
+I +TF ++S F DV NYFS YG V + R +++ M G V+FV ET K I+++ P
Sbjct: 302 KICVTFKSESIFTHTDVQNYFSQYGTVSEERFS-EERHMHGHVSFVDLETAKRIISESGP 360
Query: 435 HFVCDARVLVKPYKEKGKV 453
HF+C V K Y+EK ++
Sbjct: 361 HFICGNEVRAKAYREKHEL 379
>gi|224094721|ref|XP_002310207.1| predicted protein [Populus trichocarpa]
gi|224148376|ref|XP_002336641.1| predicted protein [Populus trichocarpa]
gi|222836422|gb|EEE74829.1| predicted protein [Populus trichocarpa]
gi|222853110|gb|EEE90657.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 16/90 (17%)
Query: 205 SSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGS 264
S +HRR S SD ++D GLG++PCL FAR +CKNG SC+FVHGG
Sbjct: 21 SHLHRRRFSESDAC-FGAEDGGFGLGYKPCLCFAREFCKNGESCKFVHGG---------- 69
Query: 265 DGAATLVGSPSKMEP--IDHCHELLRSKSA 292
LVGSP + E + E++R K+A
Sbjct: 70 ---GVLVGSPRETEELYLQLQEEMMRMKAA 96
>gi|414872916|tpg|DAA51473.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 499
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 336 AAAAALMLNEDMHKF-GRS-RLERNDFSINGSAGIVNPASRQI---YLTFPADSTFREED 390
A L+ EDMH+F RS R++R+D I +PA+R+I Y +P +
Sbjct: 267 ATVGMLLGGEDMHRFPVRSPRMDRDDL-------IRSPAARRIVSNYFGYPEHTPPLLAP 319
Query: 391 VSNYFSIYGPVQDVRIP---YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDA------- 440
+ F + + +P + ++ + V +P + + + D
Sbjct: 320 LLRLFRFVSTSRSITLPRHRWTEQHVRADVGRAHPVPAEAHVRLRHLRVRRDGEGHPEQG 379
Query: 441 -------RVLVKPYKEKGKVPDKYRKQQQQVERG-EFSPCGTPTG-LDSRDPFDLQL 488
R LVKPYKEKGKVP ++RK Q G EF+ C +PTG LDSRDP+ L L
Sbjct: 380 QPALRVRRALVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 436
>gi|414870056|tpg|DAA48613.1| TPA: hypothetical protein ZEAMMB73_895706 [Zea mays]
Length = 330
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 12/69 (17%)
Query: 189 NGATDSMLFPSY--W--GGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKN 244
+G TD+ Y W G HR S S+SD ++S WRPC+Y+AR YCKN
Sbjct: 245 DGGTDTFYADEYDCWSPAGAGGAHRWSFSLSDAESAAS--------WRPCMYYAREYCKN 296
Query: 245 GSSCRFVHG 253
GSSCRF HG
Sbjct: 297 GSSCRFFHG 305
>gi|297725823|ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group]
gi|255677923|dbj|BAH94003.1| Os07g0583500 [Oryza sativa Japonica Group]
Length = 998
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 376 IYLTFPADS-TFREEDVSNYFSIYGPVQDVRI---PYQQKRMFGFVTFVYPETVKIILAK 431
IY+T D +E++ +YF +GPV +V + P +K FGFVTF +TV ++L+K
Sbjct: 222 IYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNEKYTFGFVTFENADTVSLLLSK 281
Query: 432 GNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQ 463
PHF+ +V VK Y E + KQ+Q+
Sbjct: 282 STPHFIFGVKVRVKRYLE-------WTKQEQR 306
>gi|222637348|gb|EEE67480.1| hypothetical protein OsJ_24899 [Oryza sativa Japonica Group]
Length = 739
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 376 IYLTFPADS-TFREEDVSNYFSIYGPVQDVRI---PYQQKRMFGFVTFVYPETVKIILAK 431
IY+T D +E++ +YF +GPV +V + P +K FGFVTF +TV ++L+K
Sbjct: 312 IYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNEKYTFGFVTFENADTVSLLLSK 371
Query: 432 GNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQ 463
PHF+ +V VK Y E + KQ+Q+
Sbjct: 372 STPHFIFGVKVRVKRYLE-------WTKQEQR 396
>gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 552
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 376 IYLTFPADS-TFREEDVSNYFSIYGPVQDVRI---PYQQKRMFGFVTFVYPETVKIILAK 431
IY+T D +E++ +YF +GPV +V + P +K FGFVTF +TV ++L+K
Sbjct: 208 IYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGNEKYTFGFVTFENADTVSLLLSK 267
Query: 432 GNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQ 463
PHF+ +V VK Y E + KQ+Q+
Sbjct: 268 STPHFIFGVKVRVKRYLE-------WTKQEQR 292
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ---QKRMFGFVTFVYPETVKIILAKG 432
IY+T A + +++ +YF +GPV +V IP++ +K FGFVTF +TV ++L+K
Sbjct: 375 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 433
Query: 433 NPHFV 437
H +
Sbjct: 434 TSHSI 438
>gi|414864203|tpg|DAA42760.1| TPA: hypothetical protein ZEAMMB73_353296 [Zea mays]
Length = 134
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 5/48 (10%)
Query: 490 ARMFY--NNTQDMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVK 532
ARM NN ++L RRK+EEQ A+LQ A+ELQSRRLMGLQLLD+K
Sbjct: 47 ARMLQHSNNANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLK 94
>gi|413919194|gb|AFW59126.1| hypothetical protein ZEAMMB73_205521 [Zea mays]
Length = 464
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 121/281 (43%), Gaps = 81/281 (28%)
Query: 307 QLMGSSSFPYSP------------KSMNLFLQQQQNDTQRAAAAAALML--NEDMHKF-G 351
Q +G ++FPYSP K ++ LQQQQ RAAAAA+LML +++ HKF
Sbjct: 21 QRLGPAAFPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLMLGGSDEAHKFMA 80
Query: 352 RSRLERNDFS---------------INGSAGIVNPASRQIYLTFP--------ADSTFRE 388
R RL+R DF+ G+ ++ P +R + P A S R
Sbjct: 81 RPRLDRADFASLMIYYYYNPTVGVHTGGAVHVLPPTTRPAHGRIPPAAAPSTTASSPSRI 140
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
V+ +I+GP + Q + + ++ LA N
Sbjct: 141 NSVA-VRTIHGP----QFASQFAQSMAGDALLDDLQLQEQLAFLN--------------- 180
Query: 449 EKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLG------------ARMFY-- 494
E G P + VE C +P D+ F LG ARM
Sbjct: 181 EGGGYPAHQLQGFDGVE------CRSPDPGDADGMFAFGLGWHNGGQRTAGAHARMLQHS 234
Query: 495 NNTQDMLWRRKMEEQ---ADLQQALELQSRRLMGLQLLDVK 532
N+ ++L RRK+EE+ A+LQ A+ELQSRRLMGLQLLD+K
Sbjct: 235 NSANELLLRRKLEEEQQAAELQHAIELQSRRLMGLQLLDLK 275
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 361 SINGSAGIVN-PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ---QKRMFGF 416
SI + G N P+S+ I P +ST +E + F+ YG +Q VRIP + R FGF
Sbjct: 782 SIKSNGGQPNKPSSKIIIKNLPFESTIKE--IRKLFTAYGEIQSVRIPKKPNGGHRGFGF 839
Query: 417 VTFVYPETVKIIL-AKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ 460
V F+ E K + A GN HF R LV Y E+ K D+ R++
Sbjct: 840 VEFLTEEEAKNAMEALGNSHFY--GRHLVLQYAEQDKNIDELREK 882
>gi|218199913|gb|EEC82340.1| hypothetical protein OsI_26639 [Oryza sativa Indica Group]
Length = 243
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ---QKRMFGFVTFVYPETVKIILAKG 432
IY+T A + +++ +YF +GPV +V IP++ +K FGFVTF +TV ++L+K
Sbjct: 168 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 226
Query: 433 NPHFVCDARVLVK 445
H + V VK
Sbjct: 227 TSHSISGVEVRVK 239
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 387 REEDVSNYFSI---YGPVQDVRI---PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
+E+ NY S+ +GPV +V + P +K FGFVTF + V ++L+K PHF+
Sbjct: 10 KEKFPPNYLSLPRKFGPVINVYLSCKPGNEKYTFGFVTFENADMVSLLLSKSTPHFIFGV 69
Query: 441 RVLVKPYKEKGKVPDKYRKQQQQ 463
+V VK Y E + KQ+Q+
Sbjct: 70 KVRVKRYLE-------WTKQEQR 85
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK---RMFGFVTFVYPETVKI 427
P+S+ I P +ST +E + F+ YG +Q VRIP + R FGFV F+ E K
Sbjct: 778 PSSKIIIKNLPFESTTKE--IRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKN 835
Query: 428 IL-AKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ 460
+ A G+ HF R LV Y E+ K D+ R++
Sbjct: 836 AMEALGSSHFY--GRHLVLQYAEQDKNVDELREK 867
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S D E R+ A + + R ++ G F +
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
+ + + D + A A+ +D H L RN SI+GS G P +
Sbjct: 61 ERVVMDKHMIDGRTVEAKKAV-PRDDQH-----LLNRNTGSIHGSPG---PGRTKKIFVG 111
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
ST E D YF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 112 GLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHK 166
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 72/189 (38%), Gaps = 11/189 (5%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHE-LLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD VG S D E + A V + +L + G F P
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFS-DPSV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
++ LQ++ + R M E+ GR+ S G A N +
Sbjct: 60 LDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDA--YNKTKKIFVGGL 117
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHF 436
P T +E+ YF +YGPV DV I Y Q R FGFV+F + V +L K H
Sbjct: 118 PP--TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHD 174
Query: 437 VCDARVLVK 445
+ +V VK
Sbjct: 175 LSGKQVEVK 183
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQ-----QRLAAASQLMGSSSFPY 316
M SD +G S D E LR + +V++ R ++ G F
Sbjct: 1 MQSDSGKLFIGGIS----WDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-I 55
Query: 317 SPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQ 375
P ++ +Q++ N R A + +D + L R SI+GS G P +R+
Sbjct: 56 DPAVADIVVQEKHNIDGRMVEAKKAVPRDDQNV-----LSRTSGSIHGSPG---PGRTRK 107
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
I++ A ST E D YF +G + DV + Y Q+ R FGF+T+ E V +L K
Sbjct: 108 IFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLK 166
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 72/189 (38%), Gaps = 11/189 (5%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD VG S D E + + A V + +L + G F P
Sbjct: 1 MDSDQGKLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFS-DPSV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
++ LQ + N R M E+ GR+ S G + N +
Sbjct: 60 LDRVLQDKHNIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDS--FNKTKKIFVGGL 117
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHF 436
P T +E+ YF +YGPV DV I Y Q R FGFV+F + V +L K H
Sbjct: 118 PP--TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHK-TFHD 174
Query: 437 VCDARVLVK 445
+ +V VK
Sbjct: 175 LSGKQVEVK 183
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 16/176 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E + A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFS-DPAI 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ ++++ N R A + +D + L RN SI+GS G P +R+I++
Sbjct: 60 AEIVIKEKHNIDGRMVEAKKAVPRDDQNI-----LSRNSGSIHGSPG---PGRTRKIFVG 111
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
A ST E D YF +G + DV + Y Q+ R FGF+T+ E V +L K
Sbjct: 112 GLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLK 166
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-----KSAAAAQVQQQRLAAASQLMGSSSFPY 316
M SD +G S D E LR A + + R ++ G F
Sbjct: 1 MQSDNGKLFIGGIS----WDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFS- 55
Query: 317 SPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQ 375
P + ++++ N R A + +D + L RN SI+GS G P +R+
Sbjct: 56 DPAVAEIVIKEKHNIDGRMVEAKKAVPRDDQNI-----LSRNSGSIHGSPG---PGRTRK 107
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
I++ A ST E D YF +G + DV + Y Q+ R FGF+T+ E V +L K
Sbjct: 108 IFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLK 166
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 14/175 (8%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S D E R+ A + + R ++ G F +
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
+ + + D R A + +D H L RN SI+GS G P +
Sbjct: 61 ERVVMDKHMID-GRTVEAKKAVPRDDQHL-----LNRNTGSIHGSPG---PGRTKKIFVG 111
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
ST E D YF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 112 GLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHK 166
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 14/175 (8%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S D E R+ A + + R ++ G F +
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
+ + + D R A + +D H L RN SI+GS G P +
Sbjct: 61 ERVVMDKHMID-GRTVEAKKAVPRDDQHL-----LNRNTGSIHGSPG---PGRTKKIFVG 111
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
ST E D YF +G + DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 112 GLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHK 166
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
A + + R ++ G F P ++++ N R A + +D +S
Sbjct: 35 AVIMKDRTTGRARGFGFVVFA-DPAVAERVIKEKHNIDGRMVEAKKAVPKDD-----QSI 88
Query: 355 LERNDFSINGSAGIVNPA-SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----Q 409
L RN SI+GS G P +R+I++ A ST E D YF +G + DV + Y Q
Sbjct: 89 LSRNSGSIHGSPG---PGRTRKIFVGGLA-STVTESDFKKYFDQFGAITDVVVMYDHNTQ 144
Query: 410 QKRMFGFVTFVYPETVKIILAK 431
+ R FGF+T+ E V +L K
Sbjct: 145 RPRGFGFITYESEEAVDKVLLK 166
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
A + + R ++ G F P ++++ N R A + +D +S
Sbjct: 35 AVIMKDRTTGRARGFGFVVFA-DPAVAERVIKEKHNIDGRMVEAKKAVPKDD-----QSI 88
Query: 355 LERNDFSINGSAGIVNPA-SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----Q 409
L RN SI+GS G P +R+I++ A ST E D YF +G + DV + Y Q
Sbjct: 89 LSRNSGSIHGSPG---PGRTRKIFVGGLA-STVTESDFKKYFDQFGAITDVVVMYDHNTQ 144
Query: 410 QKRMFGFVTFVYPETVKIILAK 431
+ R FGF+T+ E V +L K
Sbjct: 145 RPRGFGFITYESEEAVDKVLLK 166
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
A + + R ++ G F P ++ +Q++ N R A + +D +
Sbjct: 18 AVIMKDRTTGRARGFGFVVF-IDPAVADIVVQEKHNIDGRMVEAKKAVPRDDQNV----- 71
Query: 355 LERNDFSINGSAGIVNPA-SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----Q 409
L R SI+GS G P +R+I++ A ST E D YF +G + DV + Y Q
Sbjct: 72 LSRTSGSIHGSPG---PGRTRKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQ 127
Query: 410 QKRMFGFVTFVYPETVKIILAK 431
+ R FGF+T+ E V +L K
Sbjct: 128 RPRGFGFITYDSEEAVDQVLLK 149
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 46.6 bits (109), Expect = 0.034, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 388 EEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARV 442
EE +++YF YG V D + Q+ R FGFVTF P++V +L+ G PH VCD +
Sbjct: 13 EESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSSG-PHVVCDREI 70
>gi|413919657|gb|AFW59589.1| hypothetical protein ZEAMMB73_140082 [Zea mays]
Length = 293
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 24/62 (38%)
Query: 334 RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
RA AA L+ EDMH+F IYL FPADST+ EEDVSN
Sbjct: 237 RATAAGMLLGGEDMHRFP------------------------IYLMFPADSTYSEEDVSN 272
Query: 394 YF 395
YF
Sbjct: 273 YF 274
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 351 GRSRLERNDFSINGSAGIVNPASRQIY---LTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
G + N+ + NGS N R+++ +++ D+ +D+ YFS +G V DV I
Sbjct: 38 GDGNGQTNEVAQNGSDSKTNEDERKLFVGGISWDTDN----KDLREYFSKFGVVVDVNIK 93
Query: 408 YQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+ R FGFVTF E ++ +L K PH V ++ KP K
Sbjct: 94 TDPTTGKSRGFGFVTFTAKEAIEAVL-KATPHTVKGKQIDPKPAK 137
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVK 426
P ++I++ +S E D+ YF +GPV++V +P+ Q+R F FVTF ++V+
Sbjct: 140 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVE 198
Query: 427 IIL 429
++
Sbjct: 199 LVC 201
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 351 GRSRLERNDFSINGSAGIVNPASRQIY---LTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
G + N+ + NGS G N R+++ +++ D+ +D+ YFS +G V DV I
Sbjct: 9 GEGNGQTNEAAQNGSDGKTNEDERKLFVGGISWDTDN----KDLREYFSKFGVVVDVNIK 64
Query: 408 YQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
+ R FGFVTF + ++ +L K PH V ++ KP K +
Sbjct: 65 TDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAKAR 110
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVK 426
P ++I++ +S E D+ YF +YGPV++V +P+ Q+R F FVTF ++V
Sbjct: 111 PGIKKIFVG-GLESDMPEADIKAYFEMYGPVENVELPFDKAKIQRRQFAFVTFEREDSVD 169
Query: 427 II 428
++
Sbjct: 170 LV 171
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+D+ YFS YG V DV IP + R F FVTF+ P + + G H + A V V
Sbjct: 223 DDIREYFSKYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GEDHLIKGASVYVSTAS 279
Query: 449 EKGKVPDKYRKQQQQVERGEFS 470
+ P+ R QQ+ G FS
Sbjct: 280 PR---PEHNRNQQKNQMGGNFS 298
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 281 DHC------------HELLR---SKSAAAAQ--VQQQRLAAASQLMGSSSFPYSPKSMNL 323
DHC E LR SK Q + + RL ++ G F P +++
Sbjct: 4 DHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFS-DPSIVDI 62
Query: 324 FLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLT-FPA 382
LQ++ RA A + + + ND G + +++I++ PA
Sbjct: 63 ALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSV---RTKKIFVGGLPA 119
Query: 383 DSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
+ T EED NYF +G + DV + Y Q+ R FGF++F + V+ +L K
Sbjct: 120 NLT--EEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQK 170
>gi|240849025|ref|NP_001155653.1| nucleolar phosphoprotein-like [Acyrthosiphon pisum]
gi|239788809|dbj|BAH71066.1| ACYPI006149 [Acyrthosiphon pisum]
Length = 175
Score = 45.4 bits (106), Expect = 0.084, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F E ++ +YF+ +G V ++ IP +K R + FV F+YPE K++ N +++ +
Sbjct: 38 FYENEMKHYFAQFGEVTNINIPKSKKTGKARGYAFVEFLYPEVAKVVAETMN-NYLMHKK 96
Query: 442 VLVKPYKEKGKV 453
+LV Y E +V
Sbjct: 97 ILVAKYLEPNQV 108
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 351 GRSRLERNDFSINGSAGIVNPASRQIY---LTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
G + N+ + NGS G N R+++ +++ D+ +D+ YFS +G V DV I
Sbjct: 9 GEGNGQTNEATQNGSDGKTNEDERKLFVGGISWDTDN----KDLREYFSKFGVVVDVNIK 64
Query: 408 YQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+ R FGFVTF + ++ +L K PH V ++ KP K
Sbjct: 65 TDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAK 108
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVK 426
P ++I++ +S E D+ YF +GPV++V +P+ Q+R F FVTF ++V
Sbjct: 111 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVD 169
Query: 427 IIL 429
++
Sbjct: 170 LVC 172
>gi|396475683|ref|XP_003839845.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
gi|312216415|emb|CBX96366.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
Length = 877
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 2/29 (6%)
Query: 232 RPCLYFARGYCKNGSSCRFVHG--GETGS 258
+PC +F RG CKNG+SCR+VHG GE G+
Sbjct: 794 QPCHFFQRGSCKNGASCRYVHGRVGEFGT 822
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L + PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-ETKPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYR-------------KQQQQVERGEFSPCGTPTGLDSRDPFD 485
+ KP +G P+K R K ++ G CG P D + F
Sbjct: 78 GRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFG 137
Query: 486 LQLGARMFYNNTQDM---LWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+ M Y+ + E + + QA+ + +MG + ++VKK
Sbjct: 138 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG-KKVEVKK 187
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L + PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-ETKPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYR-------------KQQQQVERGEFSPCGTPTGLDSRDPFD 485
+ KP +G P+K R K ++ G CG P D + F
Sbjct: 78 GRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFG 137
Query: 486 LQLGARMFYNNTQDM---LWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+ M Y+ + E + + QA+ + +MG + ++VKK
Sbjct: 138 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG-KKVEVKK 187
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 351 GRSRLERNDFSINGSAGIVNPASRQIY---LTFPADSTFREEDVSNYFSIYGPVQDVRIP 407
G + + N+ + NGS N R+++ +++ D+ +D+ YFS +G V DV I
Sbjct: 38 GEANAQTNEAAQNGSDAKTNEDERKLFVGGISWDTDN----KDLREYFSKFGVVVDVNIK 93
Query: 408 YQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+ R FGFVTF + ++ +L K PH V ++ KP K
Sbjct: 94 TDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAK 137
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVK 426
P ++I++ +S E D+ YF +GPV++V +P+ Q+R F FVTF ++V+
Sbjct: 140 PGIKKIFVG-GLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVE 198
Query: 427 IIL 429
++
Sbjct: 199 LVC 201
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 354 RLERNDFSINGSAGIVNPA-----SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
R ++N F+ + S+ +PA +++I++ A ST E D NYF +G + DV + Y
Sbjct: 11 RDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLA-STVTESDFKNYFDQFGTITDVVVMY 69
Query: 409 ----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQV 464
Q+ R FGF+T+ E V+ +L K H + V VK K P R Q
Sbjct: 70 DHNTQRPRGFGFITYDSEEAVEKVLHK-TFHELNGKMVEVKRAVPKDLSPSPSRGQLGGF 128
Query: 465 ERGEFSPCGT 474
G S G+
Sbjct: 129 SYGTMSRVGS 138
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 270 LVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQ 328
+G S D E R+ + + R ++ G F + + L++
Sbjct: 7 FIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLEKH 66
Query: 329 QNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFRE 388
D + A A+ ++ ++ L RN+ I GS G +++I++ A ST E
Sbjct: 67 VIDGRTVEAKKAVPRDD------QNILSRNNTGILGSPGPTR--TKKIFVGGLA-STVTE 117
Query: 389 EDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
D YF +G + DV + Y Q+ R FGF+T+ E+V+ +L K H + V V
Sbjct: 118 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYK-TFHELNGKMVEV 176
Query: 445 KPY--KEKGKVPDK 456
K KE VP++
Sbjct: 177 KRAVPKESSPVPNR 190
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 14/167 (8%)
Query: 270 LVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQ 328
+G S D E R+ A + + R ++ G F + + +++
Sbjct: 9 FIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVMEKH 68
Query: 329 QNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFRE 388
D + A A+ ED + L +N S+NGS G PA + ST E
Sbjct: 69 LIDGRNVEAKKAVP-REDQNT-----LNKNSSSVNGSPG---PARTKKIFVGGLASTVTE 119
Query: 389 EDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
D YF +G + DV + Y Q+ R FGF+T+ E V +L K
Sbjct: 120 SDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHK 166
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYR-------------KQQQQVERGEFSPCGTPTGLDSRDPFD 485
+ KP +G P+K R K ++ G CG P D + F
Sbjct: 78 GRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFG 137
Query: 486 LQLGARMFYNNTQDM---LWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+ M Y+ + E + + QA+ + +MG + ++VKK
Sbjct: 138 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG-KKVEVKK 187
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYR-------------KQQQQVERGEFSPCGTPTGLDSRDPFD 485
+ KP +G P+K R K ++ G CG P + + F
Sbjct: 78 GRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKSKKIFVGGIPHNCGEPELREYFNRFG 137
Query: 486 LQLGARMFYNNTQDM---LWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+ M Y+ + E + + QA+ + +MG + ++VKK
Sbjct: 138 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG-KKVEVKK 187
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 8 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 66
Query: 439 DARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPC 472
+ KP +G P++ R ++ V + + C
Sbjct: 67 GRNIDPKPCTPRGMQPERTRPKEGWVRKDTWCSC 100
>gi|218197033|gb|EEC79460.1| hypothetical protein OsI_20470 [Oryza sativa Indica Group]
Length = 625
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 215 SDVLGSSS--DDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGE-TGSGNLMGSDGAATLV 271
S GSSS D+ + R C ++A+G CKNG SC F+H GE +GS N + + T
Sbjct: 83 SQRFGSSSPGGDMKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSDNQVYGNHGGTGE 142
Query: 272 GS 273
GS
Sbjct: 143 GS 144
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M +D VG S D E + A + + R + G F P
Sbjct: 1 MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFA-DPSV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ ++++ N R A + D + GR+ SIN S G P +R+I++
Sbjct: 60 ADRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSG-----SINVSPG---PGRTRKIFVG 111
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAK 431
A ST E + NYF +G + DV + Y R FGF+T+ E V+ +L K
Sbjct: 112 GLA-STVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIK 166
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T E+++ YFS+YG + + +I K R FGFVTF ++V+ I + G H +
Sbjct: 178 TLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGK 237
Query: 441 RVLVK 445
RV +K
Sbjct: 238 RVEIK 242
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 354 RLERNDFSINGSAGIVNPA-----SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
R ++N F+ + S+ +PA +++I++ A ST E D NYF +G + DV + Y
Sbjct: 46 RDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLA-STVTESDFKNYFDQFGTITDVVVMY 104
Query: 409 ----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQV 464
Q+ R FGF+T+ E V+ +L K H + V VK K P R Q
Sbjct: 105 DHNTQRPRGFGFITYDSEEAVEKVLHK-TFHELNGKMVEVKRAVPKDLSPSPSRGQLGGF 163
Query: 465 ERGEFSPCGT 474
G S G+
Sbjct: 164 SYGTMSRVGS 173
>gi|75226408|sp|Q75K81.1|C3H36_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 36;
Short=OsC3H36
gi|46981267|gb|AAT07585.1| unknown protein [Oryza sativa Japonica Group]
gi|48475209|gb|AAT44278.1| unknown protein [Oryza sativa Japonica Group]
gi|222632097|gb|EEE64229.1| hypothetical protein OsJ_19062 [Oryza sativa Japonica Group]
Length = 703
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 215 SDVLGSSS--DDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGE-TGSGNLMGSDGAATLV 271
S GSSS D+ + R C ++A+G CKNG SC F+H GE +GS N + + T
Sbjct: 161 SQRFGSSSPGGDMKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSDNQVYGNHGGTGE 220
Query: 272 GS 273
GS
Sbjct: 221 GS 222
>gi|56548953|gb|AAV97647.1| DAZAP1/MEF2D fusion protein [Homo sapiens]
Length = 454
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|432943453|ref|XP_004083222.1| PREDICTED: uncharacterized protein LOC101157905 [Oryzias latipes]
Length = 359
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 215 SDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVH 252
SD SDD N G +PC Y+ +GYCKNG +C + H
Sbjct: 30 SDKNSIDSDDRNQGKDIKPCKYYNKGYCKNGKACSYSH 67
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 318 PKSMNLFLQQQQNDTQRAAAAAALMLNEDMH--KFGRSRLERNDFSINGSAGIVNPASRQ 375
P ++ LQ++ R A + E+ H + G S R+ + G N +++
Sbjct: 57 PSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGG-----NFKTKK 111
Query: 376 IYLT-FPADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILA 430
I++ P ST EE YF YG V DV + Y Q R FGF++F + V +L
Sbjct: 112 IFVGGLP--STLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 431 K 431
K
Sbjct: 170 K 170
>gi|255088323|ref|XP_002506084.1| predicted protein [Micromonas sp. RCC299]
gi|226521355|gb|ACO67342.1| predicted protein [Micromonas sp. RCC299]
Length = 567
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 230 GWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATL 270
G RPC Y+ G C+ G +C FVH G+ G S GA T
Sbjct: 358 GTRPCRYWQLGKCRRGDACDFVHAGDAGGNRAGASTGAETC 398
>gi|71999554|ref|NP_001023574.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
gi|351059313|emb|CCD74156.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
Length = 308
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
ED+S++F+ YG V ++ Y + R F FV F E K+ LA + V V
Sbjct: 43 EDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA-AREQTIKGKSVEV 101
Query: 445 KPYKEK-------GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNT 497
KP K + G +P Y +Q R F G ++ PFD Q AR N
Sbjct: 102 KPAKSRENKKVFVGGLPSDYSEQDL---RSHFEQFGKVDDIEW--PFDKQTKARR---NF 153
Query: 498 QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+++ EE AD + Q+++ G + DVKK
Sbjct: 154 AFIVFEE--EESADKASS---QTKQTFGTRECDVKK 184
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T +E+ YF +YGPV DV I Y Q R FGFV+F + V +L K H +
Sbjct: 115 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGK 173
Query: 441 RVLVK 445
+V VK
Sbjct: 174 QVEVK 178
>gi|71999552|ref|NP_001023573.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
gi|351059312|emb|CCD74155.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
Length = 305
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
ED+S++F+ YG V ++ Y + R F FV F E K+ LA + V V
Sbjct: 43 EDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA-AREQTIKGKSVEV 101
Query: 445 KPYKEK-------GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNT 497
KP K + G +P Y +Q R F G ++ PFD Q AR N
Sbjct: 102 KPAKSRENKKVFVGGLPSDYSEQDL---RSHFEQFGKVDDIEW--PFDKQTKARR---NF 153
Query: 498 QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+++ EE AD + Q+++ G + DVKK
Sbjct: 154 AFIVFEE--EESADKASS---QTKQTFGTRECDVKK 184
>gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 476
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 8 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 66
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P+K R ++
Sbjct: 67 GRNIDPKPCTPRGMQPEKSRTKE 89
>gi|393244597|gb|EJD52109.1| hypothetical protein AURDEDRAFT_134759 [Auricularia delicata
TFB-10046 SS5]
Length = 623
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 19/72 (26%)
Query: 204 GSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMG 263
GS HRR S ++ G G PCL+F G C+NG CRF H +M
Sbjct: 418 GSGHHRRGGRPS---------ISGGRGKPPCLFFPSGRCRNGDQCRFPH--------VMP 460
Query: 264 SDGAATLVGSPS 275
+DGA G+PS
Sbjct: 461 TDGATP--GTPS 470
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 22/171 (12%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET-KPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYR-------------KQQQQVERGEFSPCGTPTGLDSRDPFD 485
+ KP +G P+K R K ++ G CG P D + F
Sbjct: 78 GRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFG 137
Query: 486 LQLGARMFYNNTQDM---LWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
M Y+ + E + + QA+ + +MG + ++VKK
Sbjct: 138 AVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMG-KKVEVKK 187
>gi|50557194|ref|XP_506005.1| YALI0F29073p [Yarrowia lipolytica]
gi|73918961|sp|Q6C007.1|CWC2_YARLI RecName: Full=Pre-mRNA-splicing factor CWC2
gi|49651875|emb|CAG78817.1| YALI0F29073p [Yarrowia lipolytica CLIB122]
Length = 382
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 178 PSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRR--------SCSVSDVLGSSSDDLNSGL 229
P ++ PP T ++ + W GG + CS++ G + D G
Sbjct: 67 PDSVNTDDRPPQTGTVYNIWFNKWSGGDKEDEKFNQKKADGRCSIARDSGYTRADKVPGS 126
Query: 230 GWRPCLYFARGYCKNGSSCRFVH 252
+ CLYFARG C G C F+H
Sbjct: 127 YF--CLYFARGLCTQGHKCEFLH 147
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + N +
Sbjct: 67 TARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYRKQQQ 462
+ + +E K P + R++ +
Sbjct: 127 EISIVYAEENRKTPQEMRRRTR 148
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 38 DWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 96
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 97 GRNIDPKPCTPRGMQPERTRPKE 119
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F +PE + N +C
Sbjct: 66 TARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEMNHQVICGR 125
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 126 EITIVFAEENRKTPQEMR 143
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 371 PASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVK 426
P SR++++ D + +E + +YFS YG V D I Q R FGFV F P V
Sbjct: 53 PGSRKLFVGG-LDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 111
Query: 427 IILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQ 461
+LA PH + + KP +G P++ R ++
Sbjct: 112 TVLAS-RPHTLDGRNIDPKPCTPRGMQPERTRPKE 145
>gi|320583327|gb|EFW97542.1| Protein involved in pre-mRNA splicing, component of a complex
containing Cef1p [Ogataea parapolymorpha DL-1]
Length = 313
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 178 PSQMDLSSSPPNGATDSMLFPSYWGGG-----SSVH-RRSCSVSDVLGSSSDD--LNSGL 229
P + + PP L+ S W GG + H R C + G + D + G
Sbjct: 12 PESVTADTKPPQTGQVFNLWYSRWTGGEYNGRTVAHARHRCHPAKDAGYTKADKHVEPGS 71
Query: 230 GWRP---CLYFARGYCKNGSSCRFVH 252
R CLYFARGYC NG +C ++H
Sbjct: 72 VNRDKFICLYFARGYCTNGKNCDYLH 97
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 15/176 (8%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F + +
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVA 60
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ +++ D + A A+ +D + RS SI+GS G P +R+I++
Sbjct: 61 ERVIMEKHNIDGRMVEAKKAV-PRDDQNILNRSTGS----SIHGSPG---PGRTRKIFVG 112
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
A ST E D YF YG + DV + Y Q+ R FGF+T+ E V +L K
Sbjct: 113 GLA-STVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMK 167
>gi|308448944|ref|XP_003087804.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
gi|308252629|gb|EFO96581.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
Length = 275
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
ED+S++F+ YG V ++ Y + R F FV F E K+ LA + V V
Sbjct: 43 EDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA-AREQTIKGKSVEV 101
Query: 445 KPYKEK-------GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNT 497
KP K + G +P Y +Q+ R F G ++ PFD Q R N
Sbjct: 102 KPAKSRENKKVFVGGLPSDYSEQEL---RSHFEQFGKVDDIEW--PFDKQTKTRR---NF 153
Query: 498 QDMLWRRKMEEQADLQQALELQSRRLMGLQLLDVKK 533
+++ EE AD + Q+++ G + DVKK
Sbjct: 154 AFIVFEE--EESADKASS---QTKQTFGTRECDVKK 184
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
E+++ NYF +YG + + +I Y + R FGFVTF ++V + + G H + D +V
Sbjct: 170 EDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVE 229
Query: 444 VK 445
+K
Sbjct: 230 IK 231
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 345 EDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLT-FPADSTFREEDVSNYFSIYGPVQD 403
+D H ++E G+ G + +++I++ PA T EE+ ++F+ YG V+D
Sbjct: 100 QDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIFVGGIPA--TVTEEEFKDFFTQYGEVKD 157
Query: 404 VRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVK 445
+I + R FGFVTF + V +L++GN + A+V +K
Sbjct: 158 HQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIK 203
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 354 RLERNDFSINGSAGIVNPA-----SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY 408
R ++N F+ + S+ +PA +++I++ A ST E D NYF +G + DV + Y
Sbjct: 122 RDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLA-STVTESDFKNYFDQFGTITDVVVMY 180
Query: 409 ----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQV 464
Q+ R FGF+T+ E V+ +L K H + V VK K P R Q
Sbjct: 181 DHNTQRPRGFGFITYDSEEAVEKVLHK-TFHELNGKMVEVKRAVPKDLSPSPSRGQLGGF 239
Query: 465 ERGEFSPCGT 474
G S G+
Sbjct: 240 SYGTMSRVGS 249
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDV---RIPY-QQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D T E V N+FS +GPV +V R P+ Q R FGF+TF ++ K +L + H +
Sbjct: 21 DRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL-QNRYHDML 79
Query: 439 DARVLVKPYKEKGKVP 454
RV VK +G+ P
Sbjct: 80 GKRVEVKSAVPRGQAP 95
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 16/177 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA-DPAV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ + ++ N R A + +D + RS N SI GS G P +R+I++
Sbjct: 60 AEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS----NSSSIQGSPG--GPGRTRKIFVG 113
Query: 380 -FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
P+ T E D YF +G DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 114 GLPSSVT--ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 31 DWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT-KPHNLD 89
Query: 439 DARVLVKPYKEKGKVPDKYRKQ 460
+ KP +G P+K R +
Sbjct: 90 GRNIDPKPCTPRGMQPEKTRTK 111
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 16/177 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA-DPAV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ + ++ N R A + +D + RS N SI GS G P +R+I++
Sbjct: 60 AEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS----NSSSIQGSPG--GPGRTRKIFVG 113
Query: 380 -FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
P+ T E D YF +G DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 114 GLPSSVT--ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 16/177 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA-DPAV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ + ++ N R A + +D + RS N SI GS G P +R+I++
Sbjct: 60 AEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS----NSSSIQGSPG--GPGRTRKIFVG 113
Query: 380 -FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
P+ T E D YF +G DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 114 GLPSSVT--ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT-KPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYRKQ 460
+ KP +G P+K R +
Sbjct: 78 GRNIDPKPCTPRGMQPEKTRTK 99
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 16/177 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA-DPAV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ + ++ N R A + +D + RS N SI GS G P +R+I++
Sbjct: 60 AEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS----NSSSIQGSPG--GPGRTRKIFVG 113
Query: 380 -FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
P+ T E D YF +G DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 114 GLPSSVT--ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 345 EDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLT-FPADSTFREEDVSNYFSIYGPVQD 403
+D H ++E G+ G + +++I++ PA T EE+ ++F+ YG V+D
Sbjct: 2087 QDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIFVGGIPA--TVTEEEFKDFFTQYGEVKD 2144
Query: 404 VRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVK 445
+I + R FGFVTF + V +L++GN + A+V +K
Sbjct: 2145 HQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIK 2190
>gi|242050692|ref|XP_002463090.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
gi|241926467|gb|EER99611.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
Length = 250
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 376 IYLTFPADSTFREEDVSNYFSI---------YGPVQDVRIPYQQKRMFGFVTFVYPETVK 426
IY+ F STF +YF +GPV ++I M G+V+F+YPETVK
Sbjct: 166 IYIAFSRQSTFTVRGAWSYFRYCQFAISVRKFGPVTFLQI---LGAMRGWVSFLYPETVK 222
Query: 427 IILA--KGNPHFVCDARVLVKPYKEK 450
++L+ + N H + A V + EK
Sbjct: 223 LLLSETRSNRHLILGAVVHIFSSMEK 248
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + NYFS YG V D I Q R FGFV F P V+ +L PH +
Sbjct: 19 DWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT-KPHNLD 77
Query: 439 DARVLVKPYKEKGKVPDKYRKQ 460
+ KP +G P+K R +
Sbjct: 78 GRNIDPKPCTPRGMQPEKTRTK 99
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GPV+DV +P ++ R FGFV F YPE + + N +
Sbjct: 71 TARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGR 130
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 131 EISIVFAEENRKTPQEMR 148
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GPV+DV +P ++ R FGFV F YPE + + N +
Sbjct: 71 TARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGR 130
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 131 EISIVFAEENRKTPQEMR 148
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQQQVERG 467
+ KP +G P++ R ++ ++G
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPREGWQQKG 105
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQQQVERG 467
+ KP +G P++ R ++ ++G
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPREGWQQKG 105
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD VG S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFA-DPSV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTF 380
+ ++++ N R A + +D + R+ + S++GS G +R+I++
Sbjct: 60 ADRVIKEKHNIDGRMVEAKRAIPRDDQNIPSRNSVS----SMHGSPGP--DHTRKIFVGG 113
Query: 381 PADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
A ST E D NYF +G + D + Y Q+ R FGF+T+ E V +L K
Sbjct: 114 LA-STVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTK 167
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 13/141 (9%)
Query: 295 AQVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSR 354
A + + R+ ++ G F + + +++ D R A + +D H
Sbjct: 35 AVIMRDRVTGRARGFGFVVFADPIVAERVIMEKHVVD-GRTVEAKKAVPRDDQHI----- 88
Query: 355 LERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQK--- 411
L RN SI+GS G P + ST E D YF +G + DV + Y
Sbjct: 89 LSRNTSSIHGSPG---PGRTKKIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLR 145
Query: 412 -RMFGFVTFVYPETVKIILAK 431
R FGF+T+ E V +L K
Sbjct: 146 PRGFGFITYDSEEAVDRVLHK 166
>gi|91092090|ref|XP_971602.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270004675|gb|EFA01123.1| hypothetical protein TcasGA2_TC010336 [Tribolium castaneum]
Length = 800
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 16/109 (14%)
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELL---RSK 290
C +F+RG C G+SCRF+H G T GN + +V P ++ E R +
Sbjct: 327 CRFFSRGQCTWGASCRFLHPGVTDKGNYTMFELIRPVV-------PGEYGREERSYGRPE 379
Query: 291 SAAAAQVQQQRLAAASQLMGSS------SFPYSPKSMNLFLQQQQNDTQ 333
A ++ L A +++ S + K MNL L Q++ D +
Sbjct: 380 PAPVESAWERGLRTAKEMVRKSIKRKEQDIDFEEKKMNLSLAQEEFDKE 428
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GPV+DV +P ++ R FGFV F YPE + + N +
Sbjct: 71 TARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGR 130
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 131 EISIVFAEENRKTPQEMR 148
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 365 SAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPET 424
S G+VN ++++ + +D+ +YFS +G V DV IP + R F FVTF+ PE
Sbjct: 183 SKGMVNQVPCKVFVGRCTED-MNADDLKDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEV 240
Query: 425 VKIILAKGNPHFVCDARVLVKPYKEKGK 452
+ + G H + V V KG+
Sbjct: 241 AQSLC--GEDHIIKGISVHVSNAAPKGE 266
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 69/181 (38%), Gaps = 22/181 (12%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPY----S 317
M SD VG P D E L+ V Q + F +
Sbjct: 1 MDSDEGKLFVGGI----PWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFAD 56
Query: 318 PKSMNLFLQQQQNDTQRAAAAAALMLNEDMH--KFGRSRLERNDFSINGSAGIVNPASRQ 375
P ++ LQ++ R A + E+ H + G S R+ + G N +++
Sbjct: 57 PSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGG-----NFKTKK 111
Query: 376 IYLT-FPADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILA 430
I++ P ST EE YF YG V DV + Y Q R FGF++F + V +L
Sbjct: 112 IFVGGLP--STLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 431 K 431
K
Sbjct: 170 K 170
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
E+++ NYF +YG + + +I Y + R FGFVTF ++V + + G H + D +V
Sbjct: 193 EDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVE 252
Query: 444 VK 445
+K
Sbjct: 253 IK 254
>gi|328772395|gb|EGF82433.1| hypothetical protein BATDEDRAFT_31357 [Batrachochytrium
dendrobatidis JAM81]
Length = 390
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGETG---------SGNLMGSDGAATLVGSPSK-MEPIDH 282
PC ++A C G C F+H E+ SGN D L P K I
Sbjct: 17 PCRFYALASCTKGKHCPFIHSRESSGNTVCSFYLSGNCQYGDRCVLLHSKPGKSAAAIKS 76
Query: 283 CHELLRSKSAAAAQVQQQRLAAASQLMGSSSFPYSPKSMNL 323
C L+R ++AA Q +++A + + +S +P+ L
Sbjct: 77 CSTLVRENASAACTTQDSQVSALTASLEKTSLKKTPEQTGL 117
>gi|328784424|ref|XP_624887.3| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Apis mellifera]
Length = 208
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 345 EDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDV 404
E +K ++++ + F N GIV YL F EE + +YF +G V V
Sbjct: 32 EKSYKINKAKIRQTKFQKNYPRGIV-------YLGHIPHG-FYEEQMIDYFKQFGNVTRV 83
Query: 405 RIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPY 447
R+ + R +G+V F+YPE KI N + +C R+L Y
Sbjct: 84 RVVRSKNTGRSRGYGYVEFMYPEVAKIAAETMNNYLMC-GRLLKATY 129
>gi|390364931|ref|XP_787866.3| PREDICTED: uncharacterized protein LOC582835 [Strongylocentrotus
purpuratus]
Length = 667
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 389 EDVSNYFSIYGPVQDVRIP---YQQKRMFGFVTFVYPETVKIILAK 431
ED+ YF+ YG V DV IP +KR+FGFVTF +TV +++K
Sbjct: 589 EDLKAYFTNYGVVTDVSIPPSTEGKKRVFGFVTFEDSDTVDKLISK 634
>gi|449484002|ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
Length = 271
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQ-KRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKP 446
E ++ +FS G ++ + I +Q + FVTF P+ ++I L V D V + P
Sbjct: 19 EREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIV-DKIVSITP 77
Query: 447 YKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDS---RDPFDLQLGARMFYNNTQDML 501
+ VP R++ Q+V G+ + C TPT +S D +M+ N Q+++
Sbjct: 78 AE--NHVP---RREMQEVRVGDNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVV 130
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + N +
Sbjct: 67 TARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYRKQ 460
+ + +E K P + R++
Sbjct: 127 EISIVYAEENRKTPQEMRRR 146
>gi|403417500|emb|CCM04200.1| predicted protein [Fibroporia radiculosa]
Length = 649
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 188 PNGATDSML-------FPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRP-CLYFAR 239
PNG + M P G GS R GS+ GLG +P CL+F
Sbjct: 357 PNGTVNHMTSPKSPTAHPQADGYGSPPMHRDAMTHHRRGSTRRPSFGGLGRKPPCLFFPV 416
Query: 240 GYCKNGSSCRFVH 252
G C+NG CRF H
Sbjct: 417 GKCRNGDDCRFPH 429
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + N +
Sbjct: 67 TARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYRKQ 460
+ + +E K P + R++
Sbjct: 127 EISIVYAEENRKTPQEMRRR 146
>gi|449688875|ref|XP_002157235.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Hydra
magnipapillata]
Length = 271
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCD 439
PAD++ E+D+ YFS YG + DV +P R FGFVT+ + +I+L K H +
Sbjct: 118 LPADTS--EDDLRKYFSDYGELTDVYLP-TPFRGFGFVTYAQADDAQIVLHKS--HSLKG 172
Query: 440 ARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQ 498
+R+ V + KG+ R +F + + FD + R+ YNNT+
Sbjct: 173 SRMNVTIAEPKGET------------RRDFGRRESSGRSSRQ-TFDFEDMRRLMYNNTR 218
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E + YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 32 QEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQNG-PHVLDGRTID 90
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 91 PKPCNPRTLSKPKRNNG 107
>gi|294937440|ref|XP_002782069.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239893400|gb|EER13864.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 408
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQ----KRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
++++ +YFS +G ++D + + R FGF+TF++P+ ++ L K +PH V D +
Sbjct: 66 KQELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLDK-SPHVVMDKTID 124
Query: 444 VKPYKEKGKVPDKYRKQ 460
VK E G P R +
Sbjct: 125 VKRAVEGGLGPRITRHE 141
>gi|380018349|ref|XP_003693093.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Apis florea]
Length = 226
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F EE +++YF +G V VR+ + R +G+V F+YPE KI N + +C R
Sbjct: 85 FYEEQMTDYFKQFGNVTRVRVVRSKNTGRSRGYGYVEFMYPEVAKIAAETMNNYLMC-GR 143
Query: 442 VLVKPY 447
+L Y
Sbjct: 144 LLKATY 149
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 385 TFREEDVSNYFSIYGPVQDVRI---PYQ-QKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T E+++ YF+ YG ++++ I P+ Q R F FV FV +TV +LA G+ HF+ +
Sbjct: 30 TISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFVQFVNAKTVDDLLAAGD-HFIANK 88
Query: 441 RV 442
+V
Sbjct: 89 KV 90
>gi|327291027|ref|XP_003230223.1| PREDICTED: DAZ-associated protein 1-like, partial [Anolis
carolinensis]
Length = 170
Score = 41.6 bits (96), Expect = 1.0, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 8 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 66
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 67 GRNIDPKPCTPRGMQPERTRPKE 89
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 234 CLYFARGYCKNGSSCRFVHGGETGS 258
C YF +GYC GS C FVH ET S
Sbjct: 481 CRYFTQGYCSKGSKCNFVHDSETSS 505
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F Y E + N +C
Sbjct: 68 TARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQELNHQVICGR 127
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 128 EISIVFAEENRKTPQEMR 145
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNG-PHQLDGRTID 84
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|258572190|ref|XP_002544857.1| pre-mRNA splicing factor CWC2 [Uncinocarpus reesii 1704]
gi|237905127|gb|EEP79528.1| pre-mRNA splicing factor CWC2 [Uncinocarpus reesii 1704]
Length = 415
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 184 SSSPPNGATDSMLFPSYWGGGS------SVHR---RSCSVSDVLGSSSDDLNSGLGWRPC 234
S PP T ++ + W GG S H+ R C +D + +D + C
Sbjct: 78 SEPPPQTGTIYNIWYNKWSGGDREDKYLSKHKAPSRCCIATDSGYTRADKVTGSFF---C 134
Query: 235 LYFARGYCKNGSSCRFVH 252
LYFARG C G C ++H
Sbjct: 135 LYFARGICPKGHECEYLH 152
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|389626835|ref|XP_003711071.1| pre-mRNA-splicing factor CWC2 [Magnaporthe oryzae 70-15]
gi|148887365|sp|Q51TF7.2|CWC2_MAGO7 RecName: Full=Pre-mRNA-splicing factor CWC2
gi|322366727|gb|ADW95446.1| splicing factor Cwc2 [Magnaporthe oryzae]
gi|351650600|gb|EHA58459.1| pre-mRNA-splicing factor CWC2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGS--------SVHRRSCSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG + + C+V+ G + D +G + CL
Sbjct: 54 SEPPPQTGTTFNIWYNKWSGGDREDKYTSQTAAKGRCNVAKDSGYTKADQTTGSYF--CL 111
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 112 FFARGVCPKGQDCEYLH 128
>gi|340959846|gb|EGS21027.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 408
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D G + CL
Sbjct: 64 SERPPQTGTVFNIWYNKWSGGDREDKYLSQTHAKGRCNIARDSGYTRADSRPGSYF--CL 121
Query: 236 YFARGYCKNGSSCRFVH 252
YFARG C G C ++H
Sbjct: 122 YFARGICPKGQDCDYLH 138
>gi|318086976|gb|ADV40080.1| putative RNA-binding protein musashi [Latrodectus hesperus]
Length = 298
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 362 INGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFV 417
I V P ++I++ +S E D+ NYF YG V+ V +P+ Q+R F FV
Sbjct: 124 IEAKRAKVRPGIKKIFVG-GIESDMTEADIRNYFEHYGKVEAVELPFDKVKNQRRQFCFV 182
Query: 418 TFVYPETVKIILAK-----GNPHFVCDAR 441
TF TV + + GN CD +
Sbjct: 183 TFEDEMTVDQVCKQPKQKIGNKE--CDVK 209
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ--QQVE 465
+ KP +G P++ R ++ QQ E
Sbjct: 77 GRNIDPKPCTPRGMQPERSRPREGWQQKE 105
>gi|66362664|ref|XP_628298.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
gi|46229863|gb|EAK90681.1| 3CCCH domain containing protein [Cryptosporidium parvum Iowa II]
Length = 591
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 231 WRP--CLYFARGYCKNGSSCRFVHGGE 255
W+ CL F++G CKNG +CRF HG E
Sbjct: 93 WKTKLCLMFSKGACKNGDNCRFAHGSE 119
>gi|224010880|ref|XP_002294397.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969892|gb|EED88231.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1015
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGE 255
PC +FA G C+NG+SCRF H G+
Sbjct: 908 PCKFFASGKCRNGASCRFSHEGQ 930
>gi|145507242|ref|XP_001439576.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406771|emb|CAK72179.1| unnamed protein product [Paramecium tetraurelia]
Length = 221
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 227 SGLGWRPCLYFARGYCKNGSSCRFVHGGETG 257
S L PC Y A+ YCKNGS+C+++H +T
Sbjct: 78 SNLNSVPCKYHAQNYCKNGSNCQYMHDPDTA 108
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 369 VNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPET 424
P +++I++ A T E+D YF +G + DV + Y Q+ R FGF+TF E
Sbjct: 99 AGPRTKKIFVGGLA-PTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEA 157
Query: 425 VKIILAKGNPHFVCDARVLVK 445
V ++ K N H + D V VK
Sbjct: 158 VDKVVMK-NFHELHDKTVEVK 177
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 220 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 278
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 279 GRNIDPKPCTPRGMQPERTRPKE 301
>gi|323509553|dbj|BAJ77669.1| cgd7_1120 [Cryptosporidium parvum]
Length = 579
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 231 WRP--CLYFARGYCKNGSSCRFVHGGE 255
W+ CL F++G CKNG +CRF HG E
Sbjct: 81 WKTKLCLMFSKGACKNGDNCRFAHGSE 107
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + + +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREMHHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 127 EISIVYAEENRKTPQEMR 144
>gi|19114249|ref|NP_593337.1| RNA-binding protein Cwf2 [Schizosaccharomyces pombe 972h-]
gi|20141413|sp|P87126.2|CWC2_SCHPO RecName: Full=Pre-mRNA-splicing factor cwf2; AltName:
Full=Complexed with cdc5 protein 2; AltName:
Full=Pre-mRNA-processing protein 3
gi|7542835|gb|AAF63625.1|AF250026_1 Cwf2p [Schizosaccharomyces pombe]
gi|14422269|emb|CAC41387.1| RNA-binding protein Cwf2 [Schizosaccharomyces pombe]
Length = 388
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 196 LFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSS 247
L+ + W GG S V + C +S G + D N G + CLYFARG C GS
Sbjct: 73 LWYNKWSGGMRQDPLKSQVKSETRCVISRDSGYTKADKNPGSFF--CLYFARGMCSEGSK 130
Query: 248 CRFVH 252
C ++H
Sbjct: 131 CEYLH 135
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + + +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREMHHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYR 458
+ + +E K P + R
Sbjct: 127 EISIVYAEENRKTPQEMR 144
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 101 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 159
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 160 GRNIDPKPCTPRGMQPERTRPKE 182
>gi|67606553|ref|XP_666758.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657808|gb|EAL36525.1| hypothetical protein Chro.70136 [Cryptosporidium hominis]
Length = 577
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 231 WRP--CLYFARGYCKNGSSCRFVHGGE 255
W+ CL F++G CKNG +CRF HG E
Sbjct: 81 WKTKLCLMFSKGACKNGDNCRFAHGSE 107
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 128 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 179
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 71 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 129
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 130 GRNIDPKPCTPRGMQPERTRPKE 152
>gi|303318765|ref|XP_003069382.1| Cell cycle control protein cwf2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109068|gb|EER27237.1| Cell cycle control protein cwf2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320034519|gb|EFW16463.1| pre-mRNA-splicing factor cwc2 [Coccidioides posadasii str.
Silveira]
Length = 415
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGS------SVHR--RSCSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H+ CS++ G + D +G + CL
Sbjct: 78 SEPPPQTGTIYNIWYNKWSGGDREDKYLSKHKAPSRCSIATDSGYTRADKVTGSFF--CL 135
Query: 236 YFARGYCKNGSSCRFVH 252
YFARG C G C ++H
Sbjct: 136 YFARGVCPKGHECEYLH 152
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+D+ YFS +G V +V +P R F FVTF+ PE + G H V D V V
Sbjct: 191 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRVSEAA 248
Query: 449 EKGKVP 454
K + P
Sbjct: 249 PKPQAP 254
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 128 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 179
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYK 448
+D+ YFS +G V +V +P R F FVTF+ PE + G H V D V V
Sbjct: 206 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRVSEAA 263
Query: 449 EKGKVP 454
K + P
Sbjct: 264 PKPQAP 269
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 131 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 182
>gi|119181821|ref|XP_001242093.1| hypothetical protein CIMG_05989 [Coccidioides immitis RS]
gi|392864987|gb|EAS30723.2| pre-mRNA-splicing factor cwc2 [Coccidioides immitis RS]
Length = 415
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGS------SVHR--RSCSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H+ CS++ G + D +G + CL
Sbjct: 78 SEPPPQTGTIYNIWYNKWSGGDREDKYLSKHKAPSRCSIATDSGYTRADKVTGSFF--CL 135
Query: 236 YFARGYCKNGSSCRFVH 252
YFARG C G C ++H
Sbjct: 136 YFARGVCPKGHECEYLH 152
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 131 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 182
>gi|270002526|gb|EEZ98973.1| hypothetical protein TcasGA2_TC004828 [Tribolium castaneum]
Length = 211
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F EE+++ YF +G V +V++ + + FG+V F +PE KI N + + R
Sbjct: 62 FYEEEITKYFKQFGRVTNVKVCRSRNNGNSKGFGYVEFAHPEVAKIAAETMNNYIMFKKR 121
Query: 442 VLVK--PYKEKGK--------VPDKYRKQQQQVE 465
++ + P +++ K +P K+ KQ+Q+++
Sbjct: 122 IVAEFVPQEKRPKSLFHGKQSMPQKFSKQRQRLK 155
>gi|440466593|gb|ELQ35853.1| pre-mRNA-splicing factor cwc2 [Magnaporthe oryzae Y34]
gi|440486849|gb|ELQ66677.1| pre-mRNA-splicing factor cwc2 [Magnaporthe oryzae P131]
Length = 580
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGS--------SVHRRSCSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG + + C+V+ G + D +G + CL
Sbjct: 54 SEPPPQTGTTFNIWYNKWSGGDREDKYTSQTAAKGRCNVAKDSGYTKADQTTGSYF--CL 111
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 112 FFARGVCPKGQDCEYLH 128
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 84 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 142
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 143 GRNIDPKPCTPRGMQPERTRPKE 165
>gi|254569804|ref|XP_002492012.1| Protein involved in pre-mRNA splicing, component of a complex
containing Cef1p [Komagataella pastoris GS115]
gi|238031809|emb|CAY69732.1| Protein involved in pre-mRNA splicing, component of a complex
containing Cef1p [Komagataella pastoris GS115]
gi|328351495|emb|CCA37894.1| Pre-mRNA-splicing factor cwc2 [Komagataella pastoris CBS 7435]
Length = 313
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 178 PSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRS-------CSVSDVLGSSSDDLNSGLG 230
P +D PP ++ S W GG S R + C++ G + D
Sbjct: 12 PESIDSDERPPQTGNIFNIWYSKWSGGDSSDRNTQTHSKTRCNIERDSGYTKADKEQSPF 71
Query: 231 WRPCLYFARGYCKNGSSCRFVH 252
+ CLYF+RG C G C ++H
Sbjct: 72 F--CLYFSRGACCLGKKCEYLH 91
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIP----YQQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + + +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREMHHQVIGGR 126
Query: 441 RVLVKPYKEKGKVPDKYRKQQQQVER 466
+ + +E K P + R + + R
Sbjct: 127 EISIVYAEENRKTPQEMRMRTRTSGR 152
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
+D+ +YFS +G V DV +P + R FGFVTF+ PE + + G H + A V V
Sbjct: 218 DDLRDYFSRFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 270
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 19 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 77
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 78 GRNIDPKPCTPRGMQPERTRPKE 100
>gi|429859270|gb|ELA34058.1| pre-mRNA splicing factor cwc2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 402
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+V+ G + D +G + CL
Sbjct: 61 SEPPPQTGTIFNIWYNKWSGGDREDKYLSKTHAKGRCNVAKDSGYTRADKVTGSYF--CL 118
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 119 FFARGICPKGQDCEYLH 135
>gi|355682639|gb|AER96976.1| DAZ-associated protein 1-like protein [Mustela putorius furo]
Length = 146
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 9 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 67
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 68 GRNIDPKPCTPRGMQPERTRPKE 90
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 43 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 101
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 102 GRNIDPKPCTPRGMQPERTRPKE 124
>gi|427795623|gb|JAA63263.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 363 NGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYP 422
N G + SR++++ + +D+ +YFS YG V DV IP + R F FVTFV P
Sbjct: 117 NSKDGQASELSRKVFVGRCTED-LSSDDLRDYFSKYGEVTDVFIP-KPFRAFAFVTFVDP 174
Query: 423 ETVKIILAKGNPHFVCDARVLV 444
+ + + G H + + V
Sbjct: 175 DVAQSLC--GEDHIIRGTSIHV 194
>gi|358392437|gb|EHK41841.1| hypothetical protein TRIATDRAFT_134691 [Trichoderma atroviride IMI
206040]
Length = 356
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 183 LSSSPPNGATDSMLFPSYWGGGS------SVHRRSCSVSDVLGSSSDDLNSGLGWRPCLY 236
+ +PP T ++ + W GG + + C+++ G + D SG + CL+
Sbjct: 19 IGEAPPQTGTTFNIWYNKWAGGDHEAYQQTKAKGRCNIARDSGYTKADGVSGSYF--CLF 76
Query: 237 FARGYCKNGSSCRFVH 252
FARG C G+ C ++H
Sbjct: 77 FARGLCPRGADCMYLH 92
>gi|2582639|emb|CAA05398.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 452
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 58 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 109
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 107 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 165
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 166 GRNIDPKPCTPRGMQPERTRPKE 188
>gi|320163155|gb|EFW40054.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 442
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVH 252
+D N RPC YFARG C+ G+ C F H
Sbjct: 318 ADSANGPSNKRPCKYFARGTCRKGTKCPFAH 348
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERSRPRE 99
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 20 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 78
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 79 GRNIDPKPCTPRGMQPERTRPKE 101
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
S+ E + NYF +G + DV + Y Q+ R FGF+TF E+V ++L K
Sbjct: 124 SSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 175
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 35 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 93
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 94 GRNIDPKPCTPRGMQPERTRPKE 116
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|91076290|ref|XP_968649.1| PREDICTED: similar to AGAP002409-PA [Tribolium castaneum]
Length = 588
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F EE+++ YF +G V +V++ + + FG+V F +PE KI N + + R
Sbjct: 62 FYEEEITKYFKQFGRVTNVKVCRSRNNGNSKGFGYVEFAHPEVAKIAAETMNNYIMFKKR 121
Query: 442 VLVK--PYKEKGK--------VPDKYRKQQQQVE 465
++ + P +++ K +P K+ KQ+Q+++
Sbjct: 122 IVAEFVPQEKRPKSLFHGKQSMPQKFSKQRQRLK 155
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GP++DV +P ++ R FGFV F YPE + + + H V
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREMH-HQVIGG 125
Query: 441 RVLVKPYKEKGK 452
R + Y E+ +
Sbjct: 126 REISIVYAEENR 137
>gi|347970001|ref|XP_309663.5| AGAP003497-PA [Anopheles gambiae str. PEST]
gi|333466662|gb|EAA05403.6| AGAP003497-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV---K 445
+D+ +YFS YG V DV IP + R F FVTF+ P + + G H + V V
Sbjct: 215 DDIRDYFSKYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GEDHLIKGTSVYVSTAS 271
Query: 446 PYKEKGK 452
P E G+
Sbjct: 272 PRPEHGR 278
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ--QQVERGEFS 470
+ KP +G P++ R ++ Q+ R ++S
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYS 110
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 365 SAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTF- 419
S+G N + +++++ + T ED+ NYF YG +++V I + +KR FGFVTF
Sbjct: 104 SSGDTNMSVKKLFVGGLSTET-EAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFD 162
Query: 420 VYPETVKIILAKGNPHFVCDARVLVK 445
Y K++L + H + R VK
Sbjct: 163 DYDSVDKVVLQR--HHMIKGKRTEVK 186
>gi|380470255|emb|CCF47826.1| pre-mRNA-splicing factor CWC2 [Colletotrichum higginsianum]
Length = 400
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+V+ G + D +G + CL
Sbjct: 61 SEPPPQTGTIFNIWYNKWSGGDREDKYLSKTHAKGRCNVAKDSGYTRADRVTGSYF--CL 118
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 119 FFARGICPKGQDCEYLH 135
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNG-PHQLDGRTID 84
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRSGG 101
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 387 REEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFV----- 437
++E + YF+ YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 25 QQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNG-PHVLDGRTI 83
Query: 438 ----CDARVLVKP 446
C+ R L KP
Sbjct: 84 DPKPCNPRTLQKP 96
>gi|310792407|gb|EFQ27934.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 401
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+V+ G + D +G + CL
Sbjct: 62 SEPPPQTGTIFNIWYNKWSGGDREDKYLSKTHAKGRCNVAKDSGYTRADKVTGSYF--CL 119
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 120 FFARGICPKGQDCEYLH 136
>gi|196000456|ref|XP_002110096.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
gi|190588220|gb|EDV28262.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
Length = 317
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK--RMFGFVTFVYPETVKIILAKGNPH-FVCDARV 442
+R+ D+ N F +G ++DV I + ++ + FGFVTF+ PE K AK + H D R+
Sbjct: 140 YRDGDLRNMFERFGNIEDVEIIFNERGSKGFGFVTFINPEDAK--GAKEDIHGKSVDGRI 197
Query: 443 L 443
L
Sbjct: 198 L 198
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|410949523|ref|XP_003981471.1| PREDICTED: integrin alpha-1 [Felis catus]
Length = 1179
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 14 IQNLDPENASKIMGLLLLQDHGEKEMIRL--------AFGPEALVH---SVILKARKELV 62
I +L + ++ GLL+++ H +K + L A+ +VH ++I + +
Sbjct: 814 ISDLTLQVSTTAKGLLIVRSHNDKFNVSLTVKNKKDSAYNTRTIVHYSPNLIFSGIEAIQ 873
Query: 63 RASNSPNSPSTPSSPSPFLARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTDLPNP---- 118
+ S N T PFL R+ + ++L N L + + T +A +D P
Sbjct: 874 KDSCESNHNLTCKIRYPFLRREEEVTFKILFQFNTSYL-MENVTIHLSATSDSEEPPEAL 932
Query: 119 -DDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFY 177
D+ + + L FY S +S+ + + + S++++GN+ ++FY
Sbjct: 933 FDNEVNISIPVKYEVGLQFY-----SSASEYHISIAANETVPEVINSTEDIGNE-INVFY 986
Query: 178 PS---------QMDLSSSPPNGATDS--MLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLN 226
++ LS S PN +D +L+PS W ++ + R S+ D LG +N
Sbjct: 987 LIRKSGHFPMPELKLSISFPNSTSDGYPVLYPSGWSSSNNANCRPSSLQDPLG-----IN 1041
Query: 227 SG--LGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLMGSD 265
SG + RG + S+C+F T + NL+ SD
Sbjct: 1042 SGKQMIISKSEDLKRGTILDCSTCKFA----TITCNLIPSD 1078
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|427797245|gb|JAA64074.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 517
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 363 NGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYP 422
N G + SR++++ + +D+ +YFS YG V DV IP + R F FVTFV P
Sbjct: 214 NSKDGQASELSRKVFVGRCTED-LSSDDLRDYFSKYGEVTDVFIP-KPFRAFAFVTFVDP 271
Query: 423 ETVKIILAKGNPHFV 437
+ + + G H +
Sbjct: 272 DVAQSLC--GEDHII 284
>gi|383859623|ref|XP_003705292.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Megachile rotundata]
Length = 204
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F EE++++YF +G V VR+ + R +G+V F +PE KI N + +C R
Sbjct: 62 FYEEEMADYFKQFGKVNRVRVARSSNTGKSRGYGYVEFEHPEVAKIAAETMNNYLMC-GR 120
Query: 442 VLVKPY 447
+L Y
Sbjct: 121 LLKATY 126
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 387 REEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFV----- 437
++E + YF+ YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 25 QQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNG-PHVLDGRTI 83
Query: 438 ----CDARVLVKP 446
C+ R L KP
Sbjct: 84 DPKPCNPRTLQKP 96
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 56 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 114
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 115 GRNIDPKPCTPRGMQPERTRPKE 137
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 40.4 bits (93), Expect = 2.4, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 337 AAAALMLNEDMHKFGRS-----RLERNDFSINGSAGIVNPASRQIYLT-FPADSTFREED 390
A A +L ED GR+ + R D + G +++I++ P T E++
Sbjct: 52 AVADRVLEEDHVIDGRAVEVKRTVPREDMDVKGVT-----RTKKIFVGGIPPSLT--EDE 104
Query: 391 VSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPH 435
+ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 105 LKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTH 153
>gi|328870971|gb|EGG19343.1| hypothetical protein DFA_02130 [Dictyostelium fasciculatum]
Length = 597
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 222 SDDLNSGLGWRPCLYFARGYCKNGSSCRFVH 252
+DD + W PC +F GYC G C F H
Sbjct: 325 TDDFTTDFVWEPCKFFKAGYCSKGDDCPFAH 355
>gi|312384013|gb|EFR28852.1| hypothetical protein AND_02692 [Anopheles darlingi]
Length = 518
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 212 CSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGNLM-GSDGAATL 270
CSV + S D + L C ++ G C+ GS+CRFVH ++ SG L+ G D A
Sbjct: 63 CSVQSAIRS---DTITALAGNTCHFYRLGCCRFGSTCRFVHSFDSYSGELIAGGDAPAGT 119
Query: 271 VGSPSKMEPI 280
+G P++ P+
Sbjct: 120 MG-PNESNPL 128
>gi|406861827|gb|EKD14880.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 395
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGSSVHRR--------SCSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG + C+V+ G + D SG + CL
Sbjct: 62 SEPPPQTGTIFNIWYNKWSGGDREDKYLSKTAAAGRCNVAKDTGYTKADKVSGSYF--CL 119
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 120 FFARGICPKGQECEYLH 136
>gi|356546632|ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Glycine max]
Length = 521
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKM-----EPIDHCHELLR 288
C +FA+G+C GSSC F+H +TG+ + + A LV + K E + E R
Sbjct: 221 CDFFAKGWCIRGSSCSFLHIKDTGAN--IDQEAEADLVTTHQKRQLKVEEGVRENVERSR 278
Query: 289 SKSAAAA-----QVQQQRLAAASQLMGSSSFPYSPKSMNLFLQQQQNDTQRAAAAAALML 343
A ++Q+ L+ + FP+S S N F + RA A L
Sbjct: 279 MNQQEATPSWHPSQEKQKFPLRDNLVPENRFPFS-ASDNYFSSNLSLTSTRADGMATLR- 336
Query: 344 NEDMHK 349
N+ M+K
Sbjct: 337 NQHMYK 342
>gi|198437172|ref|XP_002122781.1| PREDICTED: similar to musashi 2 [Ciona intestinalis]
Length = 386
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 346 DMHKFGRSRLERNDFSI-NGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDV 404
D + FG+S ER+ + G + +++I++ + +T + D+ NYF YG V+D
Sbjct: 53 DFNDFGKSIAERSSLGVLAGKPAQMVTRTKKIFVGGLSANTVVD-DLKNYFGTYGKVEDA 111
Query: 405 RIPYQQK----RMFGFVTFVYPETVKII 428
+ + ++ R FGFVTF E V+ +
Sbjct: 112 MLMFDKQTNRHRGFGFVTFDNEEPVEKV 139
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPERTRPKE 99
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 52 DWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 110
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 111 GRNIDPKPCTPRGMQPERTRPKE 133
>gi|294878540|ref|XP_002768400.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239870803|gb|EER01118.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 414
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPYQQ----KRMFGFVTFVYPETVKIILAKGNPHFVCD 439
S ++++ +YFS +G ++D + + R FGF+TF++P+ ++ L +PH V D
Sbjct: 52 SNCDKQELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLDD-SPHVVMD 110
Query: 440 ARVLVKPYKEKGKVPDKYRKQ 460
+ VK E G P R +
Sbjct: 111 KTIDVKRAVEGGLGPRITRHE 131
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 10 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 68
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 69 GRNIDPKPCTPRGMQPERTRPKE 91
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 13 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 71
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 72 GRNIDPKPCTPRGMQPERTRPKE 94
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 334 RAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSN 393
R A + +D H L RN SI+GS G P + ST + D
Sbjct: 73 RTVEAKKAVPRDDQHI-----LNRNTSSIHGSPG---PGRTKKIFVGGLASTVTDNDFKK 124
Query: 394 YFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
YF +G + DV + Y Q+ R FGF+T+ + V +L K
Sbjct: 125 YFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHK 166
>gi|440637445|gb|ELR07364.1| hypothetical protein GMDG_08379 [Geomyces destructans 20631-21]
Length = 409
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 178 PSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGL-------G 230
PS M S PP T ++ + W GG R C + G + L+SG G
Sbjct: 61 PSTM-TSEPPPQTGTIFNIWYNKWSGGDREDRYLCK-THAAGRCNIALDSGYTKATSVPG 118
Query: 231 WRPCLYFARGYCKNGSSCRFVH 252
CL+FARG C G C ++H
Sbjct: 119 SFFCLFFARGLCPKGPECAYLH 140
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRS-KSAAAAQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S + E S A + + R ++ G F P
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFA-DPAV 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPA-SRQIYLT 379
+ + ++ N R A + +D + RS N SI GS P +R+I++
Sbjct: 60 AEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS----NSSSIQGSP--SGPGRTRKIFVG 113
Query: 380 -FPADSTFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAK 431
P+ T E D YF +G DV + Y Q+ R FGF+T+ E V+ +L K
Sbjct: 114 GLPSSVT--ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNG-PHQLDGRTID 84
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRSGG 101
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 8 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 66
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 67 GRNIDPKPCTPRGMQPERTRPKE 89
>gi|412986499|emb|CCO14925.1| RNA-binding protein [Bathycoccus prasinos]
Length = 716
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKII 428
T EE+V +FS YGPV VR+ Y ++ + +GFV F +PE +
Sbjct: 464 TATEEEVGWFFSQYGPVARVRLIYDKETGASKRYGFVEFAHPEIAAAV 511
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 15 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 73
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 74 GRNIDPKPCTPRGMQPERTRPKE 96
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 77 GRNIDPKPCTPRGMQPEQTRPKE 99
>gi|307006509|gb|ADN23539.1| RNA-binding protein musashi subunit HRP1 [Hyalomma marginatum
rufipes]
Length = 208
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 388 EEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIIL 429
E D+ YF +GPV++V +P+ Q+R F FVTF ++V+++
Sbjct: 9 EADIKAYFEKFGPVENVELPFDKARNQRRQFTFVTFEREDSVELVC 54
>gi|388857582|emb|CCF48731.1| uncharacterized protein [Ustilago hordei]
Length = 1060
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 232 RPCLYFARGYCKNGSSCRFVHG 253
RPC +FA+G C G SCRF HG
Sbjct: 1039 RPCKFFAQGNCFRGDSCRFRHG 1060
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 40.0 bits (92), Expect = 3.0, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 353 SRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPY---- 408
S ++ N ++ G G + +++I++ S E+D YF +G + DV + Y
Sbjct: 83 SVVKANGSAVAGPGGHASSKTKKIFVG-GLGSNVTEDDFRKYFEQFGTITDVVVMYDHAT 141
Query: 409 QQKRMFGFVTFVYPETVKIILAK 431
Q+ R FGF+TF E V +L K
Sbjct: 142 QRPRGFGFITFDTEEAVDNVLHK 164
>gi|224095950|ref|XP_002310510.1| predicted protein [Populus trichocarpa]
gi|222853413|gb|EEE90960.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLMGSDG 266
PC +FA G C+NG CRF H +T S + DG
Sbjct: 311 PCKFFAAGNCRNGKYCRFSHNDQTPSPDKRSRDG 344
>gi|358388496|gb|EHK26089.1| hypothetical protein TRIVIDRAFT_176419 [Trichoderma virens Gv29-8]
Length = 379
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 187 PPNGATDSMLFPSYWGGGS------SVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
PP T ++ + W GG + + C+V+ G + D SG + CL+FARG
Sbjct: 44 PPQTGTTFNIWYNKWAGGDHEAYQQTKSKGRCNVARDSGYTKADGVSGSYF--CLFFARG 101
Query: 241 YCKNGSSCRFVH 252
C G+ C ++H
Sbjct: 102 LCPRGADCMYLH 113
>gi|367037675|ref|XP_003649218.1| hypothetical protein THITE_2107652 [Thielavia terrestris NRRL 8126]
gi|346996479|gb|AEO62882.1| hypothetical protein THITE_2107652 [Thielavia terrestris NRRL 8126]
Length = 397
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+V+ L S +S G CL
Sbjct: 60 SEPPPQTGTVFNIWYNKWAGGDREDKYLSQTHAKGRCNVA--LDSGYTRADSRPGSYFCL 117
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 118 FFARGICPKGQDCEYLH 134
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 47 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 105
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 106 GRNIDPKPCTPRGMQPERTRPKE 128
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 8 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 66
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 67 GRNIDPKPCTPRGMQPERTRPKE 89
>gi|302695591|ref|XP_003037474.1| protein with ankyrin repeats [Schizophyllum commune H4-8]
gi|300111171|gb|EFJ02572.1| protein with ankyrin repeats [Schizophyllum commune H4-8]
Length = 586
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSGNLM 262
PC++F G CKNG CRF H GSG M
Sbjct: 385 PCMFFPAGRCKNGDDCRFPHVLPDGSGPGM 414
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 388 EEDVSNYFSIYGPVQDVRI--PYQQKRM--FGFVTFVYPETVKIILAKGNPHFVCDARVL 443
E+D ++F YGPV D +I +Q KR FGF+ F + V +LA GN + A+V
Sbjct: 124 EDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKVE 183
Query: 444 VK 445
+K
Sbjct: 184 IK 185
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 389 EDVSNYFSIYGPVQDVRIP--YQQK--RMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
E V + F+++G V+DV +P Y + R FGFV F + E + L K + F D + +
Sbjct: 24 EAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALEKMDG-FELDGKAIE 82
Query: 445 KPYKEKGKVPDKYRKQQQQVERGEFSPCG 473
+KG+ + KQ+ + R E SP G
Sbjct: 83 VAIAKKGRSAPQQMKQRDERGRREGSPRG 111
>gi|452983706|gb|EME83464.1| hypothetical protein MYCFIDRAFT_154053 [Pseudocercospora fijiensis
CIRAD86]
Length = 1219
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 317 SPKSMNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPAS-RQ 375
+P S+N+ +++D Q A+A ED+ + RN + G + +
Sbjct: 782 NPPSINI---AKESDAQTASATVEFTSQEDV----LAAKTRNGKELRGREVKIQSGTLST 834
Query: 376 IYLTFPADSTFREEDVSNYFSIYGPVQDVRIP---YQQKRMFGFVTFVYPETVK 426
+Y+T D + EE + + F YG + VR P Y +R F +VTF+ PE K
Sbjct: 835 LYVTNYPD-VYDEEKIRSLFKSYGDIVSVRFPSLKYNSRRRFCYVTFLTPEMAK 887
>gi|323346883|gb|EGA81162.1| Nop15p [Saccharomyces cerevisiae Lalvin QA23]
Length = 145
Score = 40.0 bits (92), Expect = 3.5, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F E+++S YF+ +G +++VR+ +K R +GF+ FV E I N + +
Sbjct: 27 FHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHL 86
Query: 442 VLVKPYKEKGKVPDKYR-KQQQQVERGEFSP 471
+ V+ + K+ Y+ K++ VE+G P
Sbjct: 87 LQVRVLPKGAKIEKLYKYKKRVLVEKGITKP 117
>gi|323335794|gb|EGA77073.1| Nop15p [Saccharomyces cerevisiae Vin13]
gi|365763305|gb|EHN04834.1| Nop15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 145
Score = 40.0 bits (92), Expect = 3.5, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 386 FREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDAR 441
F E+++S YF+ +G +++VR+ +K R +GF+ FV E I N + +
Sbjct: 27 FHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHL 86
Query: 442 VLVKPYKEKGKVPDKYR-KQQQQVERGEFSP 471
+ V+ + K+ Y+ K++ VE+G P
Sbjct: 87 LQVRVLPKGAKIEKLYKYKKRVLVEKGITKP 117
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPH 435
+ E+++ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 98 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTH 152
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 370 NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQ--KRM--FGFVTFVYPETV 425
N + ++++ A +T E+++ YFS +G V++V++ Y + KRM FGFVTF ETV
Sbjct: 97 NVNTNKVFIGGVAQNT-SEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETV 155
Query: 426 K 426
K
Sbjct: 156 K 156
>gi|336472734|gb|EGO60894.1| hypothetical protein NEUTE1DRAFT_144233 [Neurospora tetrasperma
FGSC 2508]
gi|350294023|gb|EGZ75108.1| hypothetical protein NEUTE2DRAFT_83078 [Neurospora tetrasperma FGSC
2509]
Length = 415
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D +G + CL
Sbjct: 72 SEPPPQTGTTFNIWYNKWSGGDREDKYLSQTHAKGRCNIALDTGYTRADGVAGSFF--CL 129
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 130 FFARGVCPKGQDCEYLH 146
>gi|380093262|emb|CCC08920.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 416
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D +G + CL
Sbjct: 72 SEPPPQTGTTFNIWYNKWSGGDREDKYLSQTHAKGRCNIALDTGYTRADGVAGSFF--CL 129
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 130 FFARGVCPKGQDCEYLH 146
>gi|85103583|ref|XP_961550.1| pre-mRNA splicing factor cwc2 [Neurospora crassa OR74A]
gi|18376284|emb|CAD21397.1| conserved hypothetical protein [Neurospora crassa]
gi|28923097|gb|EAA32314.1| pre-mRNA splicing factor cwc2 [Neurospora crassa OR74A]
Length = 415
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D +G + CL
Sbjct: 72 SEPPPQTGTTFNIWYNKWSGGDREDKYLSQTHAKGRCNIALDTGYTRADGVAGSFF--CL 129
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 130 FFARGVCPKGQDCEYLH 146
>gi|340506470|gb|EGR32595.1| hypothetical protein IMG5_076250 [Ichthyophthirius multifiliis]
Length = 242
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
EE++ YFS YG +Q++++ +K + +GF+ +++PE I N H V +
Sbjct: 30 EEELKTYFSQYGEIQNIKVARSKKTARSKGYGFIQYLHPEVAAIASKTVNGHMVSGKVLQ 89
Query: 444 VKPYKEKGKVPDKYRKQQQQ 463
V K+ K P ++ Q+Q
Sbjct: 90 VHVLKKDQKNPFSFKTGQKQ 109
>gi|322795004|gb|EFZ17860.1| hypothetical protein SINV_10234 [Solenopsis invicta]
Length = 1075
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGN 260
C +++RG C G SCRF+H G T GN
Sbjct: 448 CRFYSRGQCTWGVSCRFLHPGVTDKGN 474
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 17/20 (85%)
Query: 233 PCLYFARGYCKNGSSCRFVH 252
PC +FARG C+NG++CRF H
Sbjct: 93 PCHFFARGRCRNGATCRFSH 112
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 389 EDVSNYFSIYGPVQDVRI---PYQQK-RMFGFVTFVYPETVKIILAKGNPHFVCDARV 442
E + NYF YG ++DV I P ++ R FGFVTF+ T++ IL +PHF+ ++
Sbjct: 31 ETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILL-NSPHFLDSKKI 87
>gi|389615548|dbj|BAM20734.1| heterogeneous nuclear ribonucleoprotein, partial [Papilio polytes]
Length = 140
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQNG-PHQLDGRTID 84
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|366989989|ref|XP_003674762.1| hypothetical protein NCAS_0B03040 [Naumovozyma castellii CBS 4309]
gi|342300626|emb|CCC68388.1| hypothetical protein NCAS_0B03040 [Naumovozyma castellii CBS 4309]
Length = 590
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 233 PCLYFARGYCKNGSSCRFVH 252
PC YF G CKNG++CRF H
Sbjct: 17 PCKYFQTGTCKNGNNCRFAH 36
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 85/226 (37%), Gaps = 18/226 (7%)
Query: 262 MGSDGAATLVGSPSKMEPIDHCHELLRSKSAAA-AQVQQQRLAAASQLMGSSSFPYSPKS 320
M SD +G S D E S + A V + + + G F P
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFA-DPSI 59
Query: 321 MNLFLQQQQNDTQRAAAAAALMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLT- 379
++ LQ++ R A + E+ R+ N S S G N +++I++
Sbjct: 60 LDRVLQEKHIIDGRTVEAKRALSREEQQTSSRAG---NFNSARNSGGGGNVKTKKIFVGG 116
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPH 435
P T EE YF +G V DV + Y Q R FGFV+F + V +L K H
Sbjct: 117 LPP--TLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK-TFH 173
Query: 436 FVCDARVLVKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPTGLDSR 481
+ +V VK K P + Q G + G PT D R
Sbjct: 174 DLNGKQVEVKRALPKDANPGGGSRYQ-----GYGASGGNPTTYDGR 214
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 39.7 bits (91), Expect = 4.5, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPH 435
+ E+++ YFS+YG + D +I K R FGFVTF + V+ I ++G H
Sbjct: 83 SLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTH 137
>gi|402082151|gb|EJT77296.1| pre-mRNA-splicing factor CWC2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 397
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGGSSVHRRS--------CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG + S C V+ G + D +G + CL
Sbjct: 56 SEPPPQTGTTFNIWYNKWSGGDREDKYSSQTAAKGRCHVARDSGYTRADQVTGSFF--CL 113
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 114 FFARGVCHKGQDCEYLH 130
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDA 440
T R ED+ F +GPV+DV +P ++ R FGFV F YPE + + N +
Sbjct: 71 TARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGR 130
Query: 441 RVLVKPYKEKGKVPDKYRKQQQ 462
+ + +E K P + R + +
Sbjct: 131 EISIVFAEENRKTPQEMRMRTR 152
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 385 TFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPE 423
T EED+ FS YGP+ ++ P ++ + FGFVTF++PE
Sbjct: 449 TSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPE 491
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAKGNPHFVCD 439
+T E+ YF +G V D + + + R FGF+TF E+V + A+G + D
Sbjct: 111 ATVDEDTFRAYFEEFGLVDDAVVMFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHD 170
Query: 440 ARVLVKPYKEKGKVPDKYRKQQQQ 463
++ +K + +P R Q +
Sbjct: 171 KQIEIKRAVPRDSMPPSPRALQHR 194
>gi|389610037|dbj|BAM18630.1| heterogeneous nuclear ribonucleoprotein 27c [Papilio xuthus]
Length = 318
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 389 EDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
+D+ YFS +G V DV +P + R FGFVTF+ PE + + G H + A V V
Sbjct: 219 DDLREYFSSFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 271
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 57 DWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLAS-RPHTLD 115
Query: 439 DARVLVKPYKEKGKVPDKYRKQQ 461
+ KP +G P++ R ++
Sbjct: 116 GRNIDPKPCTPRGMQPERTRPKE 138
>gi|340519275|gb|EGR49514.1| predicted protein [Trichoderma reesei QM6a]
Length = 403
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 178 PSQMDLSSSPPNGATDSMLFPSYWGGGSSVHRRS-----CSVSDVLGSSSDDLNSGLGWR 232
PS P G T ++ + + GG ++++ C+++ G + D +G +
Sbjct: 59 PSTFSNEPPPQTGTTFNIWYNKWAGGDHEAYQQTKAKGRCNIARDSGYTKADSVAGSYF- 117
Query: 233 PCLYFARGYCKNGSSCRFVH 252
CL+FARG C G+ C ++H
Sbjct: 118 -CLFFARGLCPRGADCMYLH 136
>gi|384244915|gb|EIE18412.1| hypothetical protein COCSUDRAFT_68330 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQ----KRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
E ++ YF +G + D+ +P + ++ FGF TF E ++ LA G H + V
Sbjct: 25 ESQLTEYFGQFGNILDIYLPRDRHNGARKNFGFATFENEEGLQRTLAAGTEHIIAGKTVR 84
Query: 444 VKPYKEKGKVPDKYRKQQQQVERGEFSPCGTPT 476
V + ++P Y QQ +V++ +P G P+
Sbjct: 85 VNVAGPRPELPLLY-LQQGRVQQ---APMGPPS 113
>gi|453079919|gb|EMF07971.1| hypothetical protein SEPMUDRAFT_152297 [Mycosphaerella populorum
SO2202]
Length = 521
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 225 LNSGLGWRPCLYFARGYCKNGSSCRFVHGGETGS 258
+++G+G C Y+ +G CKNGSSC F H ET S
Sbjct: 267 VDTGMGT-ACAYYQKGTCKNGSSCSFRHVRETAS 299
>gi|160333913|ref|NP_001103930.1| heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
gi|141796298|gb|AAI39675.1| Hnrnpd protein [Danio rerio]
Length = 314
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQQK----RMFGFVTFVYPETVKIILAK 431
EE + YF YG V+ + +P + K R F F+TF E VK I+ K
Sbjct: 152 EEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKKIMEK 199
>gi|298712712|emb|CBJ48737.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 485
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 234 CLYFARGYCKNGSSCRFVHGGETGSGNLMGSDGAATLVGSPSKMEPI 280
C ++ +G C+ G+SCRF HG T + +DGAA +P + P
Sbjct: 14 CTFYEKGSCRYGASCRFTHG--TSDSRELRADGAAGETQTPRQARPT 58
>gi|336259494|ref|XP_003344548.1| hypothetical protein SMAC_07556 [Sordaria macrospora k-hell]
Length = 405
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D +G + CL
Sbjct: 72 SEPPPQTGTTFNIWYNKWSGGDREDKYLSQTHAKGRCNIALDTGYTRADGVAGSFF--CL 129
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 130 FFARGVCPKGQDCEYLH 146
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 355 LERNDFSINGSAGIVNPASRQIYLTFPAD--STFREEDVSNYFSIYGPVQDVRIPY---- 408
L R+ SI+GS P+S + F ST E D YF +G + DV + Y
Sbjct: 89 LNRSSGSIHGS-----PSSGRTKKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHST 143
Query: 409 QQKRMFGFVTFVYPETVKIILAK 431
Q+ R FGF+T+ E V +L K
Sbjct: 144 QRPRGFGFITYDSEECVDRVLHK 166
>gi|156371475|ref|XP_001628789.1| predicted protein [Nematostella vectensis]
gi|156215774|gb|EDO36726.1| predicted protein [Nematostella vectensis]
Length = 322
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 25/170 (14%)
Query: 95 NNLPPLTIPSGTSWSTAVTDLPNPDDLIPQTTTTMNSSALPFYGNGTGSGSSDVIDEYQL 154
NNLPP+ P S+ + P PD ++S+ N T + + +++
Sbjct: 41 NNLPPVYNPWSHSYPVSTPSEPTPD----------SASSTVGENNQTDQDEDEETNSFKI 90
Query: 155 --QDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDSMLFPSYW---------GG 203
++ L + + + D P + P GAT+ ++ W G
Sbjct: 91 TAEEIAKNLEKYKKRPAKRQAD---PDEKKKVHWIPEGATEYNIWYDRWVGEHWHKDTMG 147
Query: 204 GSSVHRRSCSVSDVLGSSSDDLN-SGLGWRPCLYFARGYCKNGSSCRFVH 252
R C +D + + L SG C+YFA+G C G+ C F+H
Sbjct: 148 AEESETRCCLATDAGFTKATILEQSGNKHYYCIYFAKGCCHLGAECGFIH 197
>gi|425733477|ref|ZP_18851797.1| type III restriction protein res subunit [Brevibacterium casei S18]
gi|425481917|gb|EKU49074.1| type III restriction protein res subunit [Brevibacterium casei S18]
Length = 594
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 253 GGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQ 296
GGE G+G +GS+ +G P +EP + HELLR++ A AQ
Sbjct: 468 GGEFGTGGAIGSEDELDFIGIPGLLEP-EQVHELLRTQQAKQAQ 510
>gi|52078849|ref|YP_077640.1| lichenysin synthetase A [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404487724|ref|YP_006711830.1| lichenysin synthase LchAA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52002060|gb|AAU22002.1| lichenysin synthetase A [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346725|gb|AAU39359.1| lichenysin synthase LchAA [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 3580
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 22 ASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASNSPNSPSTPSSPSPFL 81
A+++ LL+ + G ++ + + P + + +L K A+ P P P+ ++
Sbjct: 2578 ANRLARLLIEKGAGPEQRVGIMVKPSLEMAAGVLAILK--AGAAYVPIDPGYPAERIGYV 2635
Query: 82 ARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTD------LPNPDDLIPQTTTTMNSSALP 135
+ +S + LL NL +P S T + D + N D++ PQ T N+ A
Sbjct: 2636 LK-DSGAELLLTQTNL---AVPEEFSGETLLLDSMLSEEITNDDEVNPQAGTQPNNLAYL 2691
Query: 136 FYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDS- 194
Y +GT V+ E+Q S NL + D F ++ D S+ D+
Sbjct: 2692 IYTSGTTGQPKGVMVEHQ----------SLVNLCYWHNDAFAVTEQDKSAKYAGFGFDAS 2741
Query: 195 --MLFPSYWGGGSSVH 208
+FP YW G+ +H
Sbjct: 2742 VWEMFP-YWIAGAELH 2756
>gi|367024837|ref|XP_003661703.1| hypothetical protein MYCTH_46410 [Myceliophthora thermophila ATCC
42464]
gi|347008971|gb|AEO56458.1| hypothetical protein MYCTH_46410 [Myceliophthora thermophila ATCC
42464]
Length = 403
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+++ G + D G + CL
Sbjct: 64 SEPPPQTGTVFNIWYNKWSGGDREDKYLSQTHAKGRCNIAQDSGYTRADSRPGSYF--CL 121
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 122 FFARGICPKGQDCDYLH 138
>gi|319648855|ref|ZP_08003064.1| hypothetical protein HMPREF1012_04103, partial [Bacillus sp.
BT1B_CT2]
gi|317388849|gb|EFV69667.1| hypothetical protein HMPREF1012_04103 [Bacillus sp. BT1B_CT2]
Length = 2986
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 22 ASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKELVRASNSPNSPSTPSSPSPFL 81
A+++ LL+ + G ++ + + P + + +L K A+ P P P+ ++
Sbjct: 2580 ANRLARLLIEKGAGPEQRVGIMVKPSLEMAAGVLAILK--AGAAYVPIDPGYPAERIGYV 2637
Query: 82 ARQNSSSSRLLGSNNLPPLTIPSGTSWSTAVTD------LPNPDDLIPQTTTTMNSSALP 135
+ +S + LL NL +P S T + D + N D++ PQ T N+ A
Sbjct: 2638 LK-DSGAELLLTQTNL---AVPEEFSGETLLLDSMLSEEITNDDEVNPQAGTQPNNLAYL 2693
Query: 136 FYGNGTGSGSSDVIDEYQLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSSSPPNGATDS- 194
Y +GT V+ E+Q S NL + D F ++ D S+ D+
Sbjct: 2694 IYTSGTTGQPKGVMVEHQ----------SLVNLCYWHNDAFTVTEQDKSAKYAGFGFDAS 2743
Query: 195 --MLFPSYWGGGSSVH 208
+FP YW G+ +H
Sbjct: 2744 VWEMFP-YWIAGAELH 2758
>gi|453083571|gb|EMF11616.1| pre-mRNA-splicing factor cwc2 [Mycosphaerella populorum SO2202]
Length = 423
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 187 PPNGATDSMLFPSYWGGG------SSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
PP T ++ + W GG SS H+ + L S + G CL+FARG
Sbjct: 68 PPQTGTIFNIWYNKWSGGDREDALSSKHQAKGRCNVALDSGYTKADKVAGSYFCLFFARG 127
Query: 241 YCKNGSSCRFVH 252
C G C ++H
Sbjct: 128 LCPKGQDCEYLH 139
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 26 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG-PHQLDGRTID 84
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 85 PKPCNPRTLQKPKRGGG 101
>gi|156845654|ref|XP_001645717.1| hypothetical protein Kpol_1043p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116384|gb|EDO17859.1| hypothetical protein Kpol_1043p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 610
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 226 NSGLGWRPCLYFARGYCKNGSSCRFVH 252
N G PC YF +GYC G++C+F H
Sbjct: 5 NRGKSSTPCKYFQQGYCNKGNNCKFAH 31
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARV 442
D EED++N FS +GP+ +I Y +R F FV FV ++ + + N + ++
Sbjct: 182 DGKVSEEDLTNAFSKFGPIN--KIDY--RRNFAFVDFVKSRDAEVAMREMNERVLLGTKL 237
Query: 443 LVKPYKEKGK 452
V P+ E+ K
Sbjct: 238 KVVPHSERSK 247
>gi|206597186|dbj|BAG71500.1| musashi [Gryllus bimaculatus]
Length = 118
Score = 38.9 bits (89), Expect = 7.0, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 389 EDVSNYFSIYGPVQDVRI---PYQQK-RMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
E + YF ++G V DV I P Q+ R FGF+TF PETV+ +L P D + +
Sbjct: 11 EKLKEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFSDPETVEKVLKV--PIHTLDGKKID 68
Query: 445 KPY---KEKGKVPDKYRK 459
+ K +GKV + +K
Sbjct: 69 PKHATPKNRGKVGSRTKK 86
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 384 STFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCD 439
ST E+D ++F YG V D +I ++ R FGFV F + V +LA GN +
Sbjct: 121 STLTEDDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAG 180
Query: 440 ARVLVK 445
++V +K
Sbjct: 181 SKVEIK 186
>gi|71004490|ref|XP_756911.1| hypothetical protein UM00764.1 [Ustilago maydis 521]
gi|46095903|gb|EAK81136.1| hypothetical protein UM00764.1 [Ustilago maydis 521]
Length = 979
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 192 TDSMLFPSYWGGGSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFV 251
T S FP G R S+S GS +D C +FAR CK+G CRF
Sbjct: 388 TGSQTFPR---GHKGARRGGASMSGSFGSRADFSKRSTERPACHFFARSACKHGEDCRFP 444
Query: 252 H 252
H
Sbjct: 445 H 445
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 388 EEDVSNYFSIYGPVQDVRIPYQ----QKRMFGFVTFVYPETVKIILAKGNPHFV------ 437
+E++ YFS YG V D + + R FGFVTF P V ++L G PH +
Sbjct: 20 QENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG-PHQLDGRTID 78
Query: 438 ---CDARVLVKPYKEKG 451
C+ R L KP + G
Sbjct: 79 PKPCNPRTLQKPKRGGG 95
>gi|428181462|gb|EKX50326.1| hypothetical protein GUITHDRAFT_151280 [Guillardia theta CCMP2712]
Length = 293
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 18/136 (13%)
Query: 131 SSALPFYGNGTGSGSSDVIDEY-----QLQDQLSFLNESSQNLGNKNQDLFYPSQMDLSS 185
S P+YG+G S + + +Y + +D + L S N + + S
Sbjct: 53 SRDCPYYGSGQSSLT--IFTDYDRATPEGEDHIKMLKISMANYSRRPARKQIEEFSNKSL 110
Query: 186 SPPNGATDSMLFPSYWGG---------GSSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLY 236
P G + ++ W G ++ HR C V G + D G C++
Sbjct: 111 QAPEGCNEYNIWYGKWCGQQWKPDKDLSAAPHR--CCVRRDAGRTKADDRFGESAYCCIF 168
Query: 237 FARGYCKNGSSCRFVH 252
FARG C G+ C F+H
Sbjct: 169 FARGCCALGADCTFLH 184
>gi|298713788|emb|CBJ27160.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 388 EEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVL 443
+E + YF +GPV D + ++ R FGF+T++ +V L+ H V + RV
Sbjct: 22 DEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMNSASVDAALSVKQ-HIVDNRRVE 80
Query: 444 VKPYKEKGKVPDKYRKQQQ 462
K + +VP K QQQ
Sbjct: 81 AKRAVPRSEVPPKVEPQQQ 99
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 383 DSTFREEDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVC 438
D + +E + +YFS YG V D I Q R FGFV F P V +LA PH +
Sbjct: 18 DWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLD 76
Query: 439 DARVLVKPYKEKGKVPDK 456
+ KP +G P++
Sbjct: 77 GRNIDPKPCTPRGMQPER 94
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 384 STFREEDVSNYFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCD 439
ST E++ ++F+ YG V D +I + ++ R FGF+ F + V +LA GN +
Sbjct: 124 STLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAG 183
Query: 440 ARVLVK 445
++V +K
Sbjct: 184 SKVEIK 189
>gi|116199137|ref|XP_001225380.1| hypothetical protein CHGG_07724 [Chaetomium globosum CBS 148.51]
gi|88179003|gb|EAQ86471.1| hypothetical protein CHGG_07724 [Chaetomium globosum CBS 148.51]
Length = 265
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 184 SSSPPNGATDSMLFPSYWGGG-------SSVHRRS-CSVSDVLGSSSDDLNSGLGWRPCL 235
S PP T ++ + W GG S H + C+V+ G + D G + CL
Sbjct: 67 SEPPPQTGTVFNIWYNKWSGGDREDKYLSQTHAKGRCNVAQDSGYTRADARPGSYF--CL 124
Query: 236 YFARGYCKNGSSCRFVH 252
+FARG C G C ++H
Sbjct: 125 FFARGICPKGQDCDYLH 141
>gi|260906185|ref|ZP_05914507.1| type III restriction protein res subunit [Brevibacterium linens
BL2]
Length = 594
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 253 GGETGSGNLMGSDGAATLVGSPSKMEPIDHCHELLRSKSAAAAQ 296
GGE G+G +GS+ +G P +EP D HELLR++ A A+
Sbjct: 469 GGEFGTGGAVGSEDELDFIGIPGLLEP-DQVHELLRTQQARQAK 511
>gi|343455562|gb|AEM36348.1| At1g58470 [Arabidopsis thaliana]
Length = 360
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 340 ALMLNEDMHK-FGRSRLERNDFSING-----SAGIVNPASRQIYLTFPADSTFREEDVSN 393
A+ +E H+ F LER +NG S+ V S++I++ + +T EE+ +
Sbjct: 80 AIRKHEIYHQPFSMQFLERKMQQMNGGLREMSSNGVASRSKKIFVGGLSSNT-TEEEFKS 138
Query: 394 YFSIYGPVQDVRIPY----QQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVK 445
YF +G DV + + + R FGFVT+ ++V++++ + N H + D RV VK
Sbjct: 139 YFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVM-QSNFHELSDKRVEVK 193
>gi|50546671|ref|XP_500805.1| YALI0B12540p [Yarrowia lipolytica]
gi|49646671|emb|CAG83056.1| YALI0B12540p [Yarrowia lipolytica CLIB122]
Length = 388
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 218 LGSSSDDLNSGLGWRPCLYFARGYCKNGSSCRFVHGGET 256
L SS D N L PC +F +G C+ G SC F H ET
Sbjct: 10 LSSSKGDKNKNLSHVPCKFFRQGACQAGDSCVFSHSVET 48
>gi|255087060|ref|XP_002505453.1| predicted protein [Micromonas sp. RCC299]
gi|226520723|gb|ACO66711.1| predicted protein [Micromonas sp. RCC299]
Length = 297
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 232 RPCLYFARGYCKNGSSCRFVHG 253
+PC++F +G+CKNGS C ++HG
Sbjct: 100 KPCVFFIQGHCKNGSKCGYLHG 121
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 389 EDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFV------- 437
E++ YFS YG V D + + R FGFVTF PE V+ L G PH +
Sbjct: 32 ENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALENG-PHTLDGRTIDP 90
Query: 438 --CDARVLVKPYKEKG 451
C+ R KP + G
Sbjct: 91 KPCNPRSQHKPKRTGG 106
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 380 FPADSTFREEDVSNYFSIYGPVQDVRIP--YQQKRMFGFVTFVYPETVKII--------- 428
PA FR ED+ F YGP+ DV IP + +R GF YP +I
Sbjct: 72 LPAQPFFRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFSLVIFEDVRDAED 131
Query: 429 -LAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQ 463
L N +VC ++ ++ + K P + + +++
Sbjct: 132 ALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERH 167
>gi|145354810|ref|XP_001421668.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581906|gb|ABO99961.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 299
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 233 PCLYFARGYCKNGSSCRFVHGGETGSG 259
PC++F RG C+ G SC++ H GE GSG
Sbjct: 264 PCIFFQRGACRAGDSCKYSHSGE-GSG 289
>gi|452982432|gb|EME82191.1| hypothetical protein MYCFIDRAFT_43156 [Pseudocercospora fijiensis
CIRAD86]
Length = 427
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 187 PPNGATDSMLFPSYWGGG------SSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
PP T ++ + W GG SS H+ + L S + G CL+FARG
Sbjct: 64 PPQTGTIFNIWYNKWSGGDREDAFSSKHQAKGRCNVALDSGYTKADKVPGSYFCLFFARG 123
Query: 241 YCKNGSSCRFVH-------GGETGSGNLMGSD 265
C G C ++H G E G G++ S+
Sbjct: 124 LCPKGQDCEYLHRLPNSRIGKEGGLGDIFPSN 155
>gi|326513378|dbj|BAK06929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 695
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 226 NSGLGWRPCLYFARGYCKNGSSCRFVHGGETGSGN 260
NSG PC YF +G C G C F HG +T N
Sbjct: 100 NSGKQMVPCYYFQKGNCIKGDKCPFSHGPQTAGNN 134
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 389 EDVSNYFSIYGPVQDVRI----PYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLV 444
E + YFS YG V D I Q R FGFV F P V +LA PH + +
Sbjct: 1 ETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDP 59
Query: 445 KPYKEKGKVPDKYRKQQ 461
KP +G P++ R ++
Sbjct: 60 KPCTPRGMQPERTRPKE 76
>gi|452841397|gb|EME43334.1| hypothetical protein DOTSEDRAFT_72676 [Dothistroma septosporum
NZE10]
Length = 414
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 187 PPNGATDSMLFPSYWGGG------SSVHRRSCSVSDVLGSSSDDLNSGLGWRPCLYFARG 240
PP T ++ + W GG SS H+ + L S + G CL+FARG
Sbjct: 63 PPQTGTIFNIWYNKWSGGDREDAISSKHQAKGRCNVALDSGYTRADKVPGSYFCLFFARG 122
Query: 241 YCKNGSSCRFVH-------GGETGSGNLMGSD 265
C G C ++H G E G G++ S+
Sbjct: 123 LCPKGQDCDYLHRLPNSRIGKEGGLGDIFPSN 154
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,772,397,676
Number of Sequences: 23463169
Number of extensions: 444144210
Number of successful extensions: 1408718
Number of sequences better than 100.0: 861
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 658
Number of HSP's that attempted gapping in prelim test: 1401927
Number of HSP's gapped (non-prelim): 5099
length of query: 583
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 435
effective length of database: 8,886,646,355
effective search space: 3865691164425
effective search space used: 3865691164425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)