Query 007959
Match_columns 583
No_of_seqs 817 out of 5068
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:42:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 6.3E-56 2.1E-60 439.9 17.3 257 307-581 13-289 (299)
2 4aoj_A High affinity nerve gro 100.0 3.2E-55 1.1E-59 440.8 20.7 257 307-581 41-319 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 6.5E-55 2.2E-59 434.5 18.5 255 307-579 26-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 2E-54 6.9E-59 429.1 21.0 259 306-580 35-299 (307)
5 4ase_A Vascular endothelial gr 100.0 7.5E-53 2.6E-57 427.0 17.3 271 295-582 52-348 (353)
6 3hmm_A TGF-beta receptor type- 100.0 1.3E-52 4.5E-57 418.8 18.6 267 308-583 4-299 (303)
7 4b9d_A Serine/threonine-protei 100.0 6.3E-53 2.2E-57 424.1 15.8 250 306-574 23-276 (350)
8 4g3f_A NF-kappa-beta-inducing 100.0 9.6E-52 3.3E-56 413.7 22.1 255 306-582 57-317 (336)
9 4fih_A Serine/threonine-protei 100.0 9.3E-52 3.2E-56 415.0 22.0 249 307-574 74-323 (346)
10 3fpq_A Serine/threonine-protei 100.0 5.1E-51 1.8E-55 401.7 23.9 246 310-574 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.2E-52 2.5E-56 409.6 14.9 248 306-573 31-283 (311)
12 4fie_A Serine/threonine-protei 100.0 1.9E-50 6.5E-55 415.4 24.1 249 307-574 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 9.5E-51 3.2E-55 396.3 17.9 246 306-574 12-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 4.7E-51 1.6E-55 403.9 10.6 242 307-569 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.6E-49 5.5E-54 394.6 16.8 249 306-574 4-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 2.1E-46 7.3E-51 379.0 22.7 283 297-582 29-316 (321)
17 3uim_A Brassinosteroid insensi 100.0 2.9E-46 9.9E-51 378.8 22.8 286 295-580 18-310 (326)
18 4b99_A Mitogen-activated prote 100.0 1E-46 3.5E-51 388.6 18.8 263 307-574 54-344 (398)
19 4f9c_A Cell division cycle 7-r 100.0 7.2E-46 2.5E-50 378.3 19.5 196 306-510 20-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 2.2E-45 7.7E-50 397.0 21.8 252 306-574 156-410 (573)
21 3v5w_A G-protein coupled recep 100.0 5.7E-45 2E-49 391.0 21.1 248 306-573 188-448 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-44 1.9E-48 359.4 21.7 257 306-581 9-282 (310)
23 4hcu_A Tyrosine-protein kinase 100.0 3.8E-44 1.3E-48 352.9 17.7 257 307-582 10-267 (269)
24 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.8E-44 2.3E-48 350.9 19.5 258 306-582 7-265 (268)
25 3kul_A Ephrin type-A receptor 100.0 7.6E-44 2.6E-48 360.7 19.6 258 307-582 49-314 (325)
26 2nru_A Interleukin-1 receptor- 100.0 2E-42 7E-47 347.4 29.8 279 295-580 13-305 (307)
27 3p86_A Serine/threonine-protei 100.0 1.4E-43 4.7E-48 356.1 20.7 260 304-582 34-299 (309)
28 3gen_A Tyrosine-protein kinase 100.0 6.2E-44 2.1E-48 354.1 17.6 259 306-583 23-282 (283)
29 2psq_A Fibroblast growth facto 100.0 1.8E-43 6.3E-48 364.2 20.3 258 306-581 80-364 (370)
30 3fxz_A Serine/threonine-protei 100.0 1.1E-42 3.8E-47 347.5 24.9 250 306-574 19-269 (297)
31 3cbl_A C-FES, proto-oncogene t 100.0 7.2E-44 2.5E-48 368.4 16.3 259 306-582 113-375 (377)
32 3ugc_A Tyrosine-protein kinase 100.0 5E-44 1.7E-48 357.1 14.6 264 307-581 10-291 (295)
33 2qol_A Ephrin receptor; recept 100.0 1.3E-43 4.5E-48 365.5 18.0 257 307-581 45-309 (373)
34 3soc_A Activin receptor type-2 100.0 2E-43 7E-48 357.2 18.7 267 306-581 23-318 (322)
35 1mp8_A Focal adhesion kinase 1 100.0 8.5E-44 2.9E-48 352.8 15.4 259 306-583 14-278 (281)
36 4eqm_A Protein kinase; transfe 100.0 2.9E-43 9.8E-48 351.3 19.0 261 307-582 11-276 (294)
37 2c30_A Serine/threonine-protei 100.0 3.1E-42 1E-46 348.2 25.5 261 295-574 23-294 (321)
38 3zgw_A Maternal embryonic leuc 100.0 2.3E-43 7.8E-48 359.1 16.9 249 306-574 9-260 (347)
39 3vhe_A Vascular endothelial gr 100.0 1.6E-43 5.5E-48 363.6 15.8 271 295-582 10-356 (359)
40 3fe3_A MAP/microtubule affinit 100.0 4.7E-43 1.6E-47 354.7 18.3 247 306-574 14-264 (328)
41 3lb7_A RAF proto-oncogene seri 100.0 1.7E-42 5.9E-47 347.8 21.6 260 306-581 35-300 (307)
42 3t9t_A Tyrosine-protein kinase 100.0 6.1E-43 2.1E-47 343.8 17.2 257 307-582 8-265 (267)
43 1luf_A Muscle-specific tyrosin 100.0 9.5E-43 3.3E-47 355.5 18.6 260 305-582 45-336 (343)
44 4e5w_A Tyrosine-protein kinase 100.0 4.3E-43 1.5E-47 351.4 15.6 263 307-581 21-302 (302)
45 1qcf_A Haematopoetic cell kina 100.0 4.2E-43 1.4E-47 371.5 15.5 257 305-581 186-444 (454)
46 1csn_A Casein kinase-1; phosph 100.0 8.5E-42 2.9E-46 341.3 23.7 262 307-582 10-284 (298)
47 2izr_A Casein kinase I isoform 100.0 2.6E-42 8.7E-47 350.4 20.1 261 307-582 9-282 (330)
48 3lxl_A Tyrosine-protein kinase 100.0 6.7E-43 2.3E-47 354.3 15.7 265 307-582 23-304 (327)
49 4euu_A Serine/threonine-protei 100.0 1.9E-41 6.6E-46 342.3 25.9 271 307-582 9-310 (319)
50 3poz_A Epidermal growth factor 100.0 2E-42 6.7E-47 350.8 18.4 256 307-581 15-278 (327)
51 1opk_A P150, C-ABL, proto-onco 100.0 8.8E-43 3E-47 372.6 16.7 258 306-582 219-479 (495)
52 1k9a_A Carboxyl-terminal SRC k 100.0 4.1E-42 1.4E-46 363.4 21.5 252 306-582 192-446 (450)
53 3niz_A Rhodanese family protei 100.0 3.4E-42 1.2E-46 346.4 19.8 261 306-574 20-300 (311)
54 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-42 9.3E-47 343.5 18.9 261 306-582 23-289 (289)
55 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-42 4.1E-47 367.7 17.2 256 306-581 183-440 (452)
56 2ivs_A Proto-oncogene tyrosine 100.0 3.5E-42 1.2E-46 346.8 19.4 259 306-582 22-312 (314)
57 1rjb_A FL cytokine receptor; k 100.0 1.8E-42 6.3E-47 353.6 17.4 261 305-582 43-335 (344)
58 3tt0_A Basic fibroblast growth 100.0 3.6E-42 1.2E-46 356.4 19.9 258 306-581 68-352 (382)
59 1o6l_A RAC-beta serine/threoni 100.0 4.9E-42 1.7E-46 348.3 20.3 248 306-574 4-260 (337)
60 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-42 4.6E-47 357.4 16.1 258 306-581 70-345 (367)
61 1tki_A Titin; serine kinase, m 100.0 6.5E-42 2.2E-46 345.7 20.5 251 306-574 4-257 (321)
62 3qup_A Tyrosine-protein kinase 100.0 4.6E-42 1.6E-46 347.5 19.3 258 306-581 22-298 (323)
63 3q4u_A Activin receptor type-1 100.0 1.1E-41 3.7E-46 341.0 21.7 262 306-579 7-300 (301)
64 1t46_A HOMO sapiens V-KIT hard 100.0 4E-42 1.4E-46 346.2 18.7 260 306-582 22-308 (313)
65 3cc6_A Protein tyrosine kinase 100.0 3.9E-42 1.3E-46 340.8 18.1 257 306-581 11-273 (281)
66 4aw2_A Serine/threonine-protei 100.0 4E-42 1.4E-46 360.0 19.1 260 301-574 68-338 (437)
67 1qpc_A LCK kinase; alpha beta 100.0 2.1E-42 7E-47 342.4 15.9 256 306-581 12-269 (279)
68 3kfa_A Tyrosine-protein kinase 100.0 6.1E-42 2.1E-46 340.6 18.7 259 305-582 11-272 (288)
69 3dtc_A Mitogen-activated prote 100.0 8.7E-42 3E-46 336.4 19.6 254 306-579 6-271 (271)
70 1ob3_A PFPK5, cell division co 100.0 5.1E-42 1.7E-46 341.3 18.0 260 307-574 2-280 (288)
71 1kob_A Twitchin; kinase, intra 100.0 1.2E-41 4.2E-46 351.6 21.3 252 306-574 50-304 (387)
72 2yab_A Death-associated protei 100.0 1.2E-41 4.1E-46 348.6 20.8 251 306-574 11-272 (361)
73 3kmu_A ILK, integrin-linked ki 100.0 9.9E-42 3.4E-46 335.7 19.5 254 306-581 9-270 (271)
74 3tki_A Serine/threonine-protei 100.0 5.9E-42 2E-46 346.4 17.8 252 306-574 6-261 (323)
75 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.9E-42 3.1E-46 346.0 19.0 246 306-574 8-258 (336)
76 4f0f_A Serine/threonine-protei 100.0 4.2E-41 1.5E-45 334.4 23.4 252 307-579 19-287 (287)
77 1mqb_A Ephrin type-A receptor 100.0 1.5E-41 5E-46 345.2 20.4 257 307-581 44-309 (333)
78 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-41 5.3E-46 341.0 20.4 254 306-581 7-263 (307)
79 4fvq_A Tyrosine-protein kinase 100.0 1.4E-41 4.9E-46 338.1 19.9 252 306-582 7-276 (289)
80 2vd5_A DMPK protein; serine/th 100.0 7.9E-42 2.7E-46 355.3 18.7 259 301-574 55-327 (412)
81 4dc2_A Protein kinase C IOTA t 100.0 2.2E-41 7.4E-46 349.9 21.8 250 306-569 51-307 (396)
82 1u59_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46 338.4 19.1 257 307-582 9-273 (287)
83 2i1m_A Macrophage colony-stimu 100.0 3.5E-42 1.2E-46 349.9 15.6 264 302-582 41-327 (333)
84 1p4o_A Insulin-like growth fac 100.0 4.2E-42 1.4E-46 347.6 15.8 264 301-582 19-300 (322)
85 3op5_A Serine/threonine-protei 100.0 1.3E-41 4.4E-46 350.0 19.3 268 306-582 34-330 (364)
86 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.8E-42 2E-46 350.0 16.0 244 305-569 21-269 (353)
87 2y0a_A Death-associated protei 100.0 2.6E-41 9E-46 342.2 20.5 250 307-574 11-271 (326)
88 2xir_A Vascular endothelial gr 100.0 8.6E-42 2.9E-46 344.2 16.7 271 295-582 15-311 (316)
89 3qd2_B Eukaryotic translation 100.0 1E-41 3.4E-46 346.1 17.3 249 306-574 5-325 (332)
90 3lxp_A Non-receptor tyrosine-p 100.0 1.3E-41 4.4E-46 343.4 17.6 260 309-581 33-310 (318)
91 3f66_A Hepatocyte growth facto 100.0 3E-41 1E-45 337.5 20.1 257 307-581 25-291 (298)
92 3a8x_A Protein kinase C IOTA t 100.0 6.9E-41 2.3E-45 341.3 23.1 250 306-569 8-264 (345)
93 3c1x_A Hepatocyte growth facto 100.0 9.6E-42 3.3E-46 351.2 16.9 255 309-581 91-355 (373)
94 2pvf_A Fibroblast growth facto 100.0 2E-41 7E-46 344.4 19.1 258 306-581 34-318 (334)
95 3kex_A Receptor tyrosine-prote 100.0 4E-42 1.4E-46 348.2 13.8 256 307-581 13-276 (325)
96 2x4f_A Myosin light chain kina 100.0 1.8E-41 6.2E-46 349.4 18.9 248 310-574 92-342 (373)
97 2h8h_A Proto-oncogene tyrosine 100.0 4.7E-42 1.6E-46 370.4 15.1 257 305-581 265-523 (535)
98 2h34_A Serine/threonine-protei 100.0 7.7E-41 2.6E-45 336.3 22.9 260 305-581 32-296 (309)
99 3pls_A Macrophage-stimulating 100.0 3.9E-41 1.3E-45 336.4 20.6 258 308-582 22-288 (298)
100 1fot_A TPK1 delta, CAMP-depend 100.0 3E-41 1E-45 339.9 19.8 245 306-574 5-258 (318)
101 4hgt_A Casein kinase I isoform 100.0 7.4E-41 2.5E-45 334.0 22.2 263 306-582 8-281 (296)
102 3v8s_A RHO-associated protein 100.0 1.6E-41 5.6E-46 352.7 18.1 256 302-574 64-329 (410)
103 3o0g_A Cell division protein k 100.0 4.5E-41 1.6E-45 335.1 20.3 261 307-574 2-282 (292)
104 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-40 4E-45 332.7 23.2 263 306-582 8-281 (296)
105 3lzb_A Epidermal growth factor 100.0 2.3E-41 7.9E-46 342.8 18.2 256 307-581 15-278 (327)
106 3cok_A Serine/threonine-protei 100.0 5.1E-41 1.8E-45 332.2 20.2 250 305-574 9-262 (278)
107 2w1i_A JAK2; chromosomal rearr 100.0 6.9E-41 2.4E-45 339.3 21.3 264 307-581 41-322 (326)
108 3c0i_A Peripheral plasma membr 100.0 9.8E-41 3.3E-45 341.5 22.5 251 307-574 24-286 (351)
109 3soa_A Calcium/calmodulin-depe 100.0 1.1E-40 3.9E-45 350.2 23.6 252 306-574 10-267 (444)
110 3p1a_A MYT1 kinase, membrane-a 100.0 3.3E-41 1.1E-45 339.3 18.4 244 307-574 57-304 (311)
111 2ozo_A Tyrosine-protein kinase 100.0 3E-41 1E-45 369.3 19.5 249 314-581 343-598 (613)
112 1xjd_A Protein kinase C, theta 100.0 9.5E-42 3.2E-46 347.1 14.4 250 303-573 13-268 (345)
113 3g2f_A Bone morphogenetic prot 100.0 4.3E-41 1.5E-45 342.3 19.2 269 306-581 12-318 (336)
114 2bdw_A Hypothetical protein K1 100.0 5.3E-41 1.8E-45 344.6 20.0 251 306-574 28-284 (362)
115 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-40 5E-45 332.4 22.7 249 306-574 12-292 (298)
116 4fr4_A YANK1, serine/threonine 100.0 2.9E-41 9.9E-46 347.8 17.9 250 306-574 14-271 (384)
117 3mdy_A Bone morphogenetic prot 100.0 2.6E-40 9E-45 336.5 24.7 266 305-582 35-332 (337)
118 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.2E-41 1.4E-45 343.4 18.6 245 306-574 40-293 (350)
119 4eut_A Serine/threonine-protei 100.0 8E-41 2.7E-45 347.9 20.9 269 307-582 9-310 (396)
120 3a62_A Ribosomal protein S6 ki 100.0 3.8E-41 1.3E-45 341.1 17.8 248 306-574 16-276 (327)
121 3brb_A Proto-oncogene tyrosine 100.0 6.2E-41 2.1E-45 337.6 19.1 259 305-581 32-308 (313)
122 3gni_B Strad alpha; kinase fol 100.0 1E-40 3.5E-45 346.5 20.8 264 306-574 24-333 (389)
123 1xbb_A Tyrosine-protein kinase 100.0 7.1E-41 2.4E-45 333.5 18.7 257 306-582 15-280 (291)
124 1u5q_A Serine/threonine protei 100.0 6.4E-41 2.2E-45 342.1 18.7 245 307-574 54-305 (348)
125 1byg_A CSK, protein (C-termina 100.0 4.4E-41 1.5E-45 332.7 16.9 252 306-582 20-274 (278)
126 2w4o_A Calcium/calmodulin-depe 100.0 7.2E-41 2.5E-45 342.1 19.0 250 306-574 52-305 (349)
127 2pmi_A Negative RE, cyclin-dep 100.0 8.6E-41 3E-45 337.1 19.3 262 306-574 4-293 (317)
128 2buj_A Serine/threonine-protei 100.0 5.9E-41 2E-45 338.3 17.7 259 306-580 28-305 (317)
129 2i0e_A Protein kinase C-beta I 100.0 5.8E-41 2E-45 342.4 17.6 244 305-569 18-266 (353)
130 2jii_A Serine/threonine-protei 100.0 3.4E-41 1.1E-45 345.3 15.9 262 307-582 42-337 (352)
131 2wqm_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 330.4 24.1 259 306-580 31-296 (310)
132 2v62_A Serine/threonine-protei 100.0 5.3E-41 1.8E-45 342.9 17.1 264 307-580 37-327 (345)
133 1fvr_A Tyrosine-protein kinase 100.0 5.9E-41 2E-45 339.9 17.3 257 306-582 24-301 (327)
134 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.8E-40 9.4E-45 340.3 22.6 250 306-581 64-339 (365)
135 3ork_A Serine/threonine protei 100.0 7.7E-41 2.6E-45 336.6 17.7 258 306-579 11-279 (311)
136 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-40 5.3E-45 336.3 19.6 250 311-574 15-270 (325)
137 3dbq_A Dual specificity protei 100.0 6.5E-41 2.2E-45 341.9 16.9 249 307-574 9-273 (343)
138 4fl3_A Tyrosine-protein kinase 100.0 1.4E-40 4.9E-45 364.8 20.7 249 313-581 375-631 (635)
139 3fdn_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45 329.6 18.4 246 306-574 8-257 (279)
140 2y94_A 5'-AMP-activated protei 100.0 1.2E-40 4.2E-45 352.3 19.3 247 306-574 15-266 (476)
141 3uc3_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 339.2 21.4 252 306-574 19-274 (361)
142 4agu_A Cyclin-dependent kinase 100.0 1.6E-40 5.5E-45 334.2 19.0 264 306-574 2-284 (311)
143 1b6c_B TGF-B superfamily recep 100.0 7E-40 2.4E-44 334.1 23.8 269 303-583 38-338 (342)
144 3f3z_A Calcium/calmodulin-depe 100.0 2.5E-40 8.7E-45 327.0 19.8 250 306-574 8-261 (277)
145 3mtl_A Cell division protein k 100.0 7E-41 2.4E-45 338.9 16.0 260 307-574 2-281 (324)
146 2eue_A Carbon catabolite derep 100.0 1E-40 3.5E-45 329.5 16.7 246 306-574 12-262 (275)
147 4ejn_A RAC-alpha serine/threon 100.0 3.7E-41 1.3E-45 356.0 14.4 249 306-574 147-404 (446)
148 3gxj_A TGF-beta receptor type- 100.0 4E-42 1.4E-46 344.5 6.5 265 307-583 3-299 (303)
149 2yfx_A Tyrosine-protein kinase 100.0 1E-40 3.4E-45 338.3 16.8 258 306-581 29-304 (327)
150 2zmd_A Dual specificity protei 100.0 1.5E-40 5.3E-45 344.7 18.5 249 307-574 56-320 (390)
151 2j0j_A Focal adhesion kinase 1 100.0 1E-40 3.5E-45 367.2 17.7 260 305-583 388-653 (656)
152 2ac3_A MAP kinase-interacting 100.0 1.4E-40 4.9E-45 335.4 17.2 258 307-574 12-295 (316)
153 1vzo_A Ribosomal protein S6 ki 100.0 3.6E-41 1.2E-45 345.2 13.0 254 306-575 53-322 (355)
154 2acx_A G protein-coupled recep 100.0 1.4E-40 4.9E-45 356.5 18.0 252 306-574 183-444 (576)
155 3kk8_A Calcium/calmodulin depe 100.0 5.5E-40 1.9E-44 325.8 20.9 251 306-574 5-261 (284)
156 1x8b_A WEE1HU, WEE1-like prote 100.0 2.7E-40 9.2E-45 328.5 18.6 243 306-574 10-279 (289)
157 3hko_A Calcium/calmodulin-depe 100.0 2E-40 6.9E-45 338.6 18.1 259 301-574 20-330 (345)
158 1u46_A ACK-1, activated CDC42 100.0 1.4E-40 4.8E-45 331.3 16.5 258 306-581 17-284 (291)
159 2a2a_A Death-associated protei 100.0 1.1E-39 3.7E-44 329.7 23.2 251 306-574 11-272 (321)
160 3is5_A Calcium-dependent prote 100.0 1.1E-39 3.6E-44 324.1 22.5 249 307-574 22-278 (285)
161 2yex_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44 325.2 19.2 252 306-574 6-261 (276)
162 3sv0_A Casein kinase I-like; t 100.0 1.2E-39 4.3E-44 345.2 24.1 262 307-582 7-279 (483)
163 3ll6_A Cyclin G-associated kin 100.0 2.8E-40 9.7E-45 336.1 18.4 255 307-581 28-308 (337)
164 3g33_A Cell division protein k 100.0 2.9E-40 9.9E-45 331.9 18.2 260 306-574 8-296 (308)
165 3llt_A Serine/threonine kinase 100.0 2.5E-40 8.7E-45 339.9 17.9 261 305-574 33-355 (360)
166 2w5a_A Serine/threonine-protei 100.0 9.2E-41 3.2E-45 330.5 14.0 256 306-577 5-270 (279)
167 2r5t_A Serine/threonine-protei 100.0 8.6E-41 2.9E-45 343.6 14.2 249 306-575 37-290 (373)
168 2jam_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 331.0 17.9 250 306-574 8-261 (304)
169 3dls_A PAS domain-containing s 100.0 1.4E-40 4.7E-45 338.0 15.3 242 306-575 23-275 (335)
170 2vgo_A Serine/threonine-protei 100.0 5.3E-40 1.8E-44 326.0 19.1 246 306-574 13-262 (284)
171 3ttj_A Mitogen-activated prote 100.0 4.7E-40 1.6E-44 348.2 19.8 260 306-574 61-355 (464)
172 2j7t_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 329.2 18.7 252 306-574 18-275 (302)
173 2rku_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 328.1 18.5 248 306-574 14-265 (294)
174 2clq_A Mitogen-activated prote 100.0 6.6E-40 2.3E-44 327.0 19.5 251 307-574 22-278 (295)
175 1ua2_A CAK, cell division prot 100.0 7.1E-40 2.4E-44 334.6 20.1 263 304-574 7-291 (346)
176 3bhy_A Death-associated protei 100.0 7.1E-40 2.4E-44 324.8 19.5 250 307-574 5-265 (283)
177 3rp9_A Mitogen-activated prote 100.0 4.6E-40 1.6E-44 349.0 19.3 193 307-504 53-280 (458)
178 3oz6_A Mitogen-activated prote 100.0 7.6E-40 2.6E-44 339.8 20.3 261 305-574 7-328 (388)
179 3pg1_A Mitogen-activated prote 100.0 5.1E-40 1.7E-44 337.9 18.7 270 299-574 14-316 (362)
180 3eqc_A Dual specificity mitoge 100.0 5.8E-40 2E-44 337.3 19.0 262 307-574 33-324 (360)
181 2a19_B Interferon-induced, dou 100.0 4.9E-40 1.7E-44 326.0 17.7 246 307-581 11-274 (284)
182 3byv_A Rhoptry kinase; malaria 100.0 2.2E-40 7.5E-45 342.5 15.3 240 306-574 72-359 (377)
183 2qr7_A Ribosomal protein S6 ki 100.0 5.4E-40 1.8E-44 334.3 18.0 251 306-574 21-277 (342)
184 1nxk_A MAP kinase-activated pr 100.0 1.1E-39 3.9E-44 339.2 20.6 250 306-574 60-321 (400)
185 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.1E-40 1.7E-44 351.5 18.4 248 306-569 184-438 (543)
186 1cm8_A Phosphorylated MAP kina 100.0 8.4E-40 2.9E-44 336.5 19.2 258 307-574 25-307 (367)
187 2h6d_A 5'-AMP-activated protei 100.0 7.9E-40 2.7E-44 323.2 18.2 247 306-574 10-261 (276)
188 2owb_A Serine/threonine-protei 100.0 5.3E-40 1.8E-44 334.0 17.2 248 306-574 40-291 (335)
189 3mi9_A Cell division protein k 100.0 6.3E-40 2.1E-44 335.8 17.4 265 306-574 16-311 (351)
190 3com_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 324.8 22.6 250 306-574 28-278 (314)
191 3q60_A ROP5B; pseudokinase, tr 100.0 1.8E-40 6.1E-45 342.4 13.3 253 307-574 62-352 (371)
192 3a7i_A MST3 kinase, serine/thr 100.0 9.8E-40 3.4E-44 327.3 18.2 249 306-575 21-271 (303)
193 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.1E-40 1.4E-44 334.0 15.5 264 303-574 30-318 (329)
194 2y7j_A Phosphorylase B kinase 100.0 3.1E-39 1.1E-43 332.1 22.1 253 304-574 91-359 (365)
195 1t4h_A Serine/threonine-protei 100.0 7E-39 2.4E-43 319.0 23.8 247 309-574 28-282 (290)
196 3i6u_A CDS1, serine/threonine- 100.0 7.2E-40 2.5E-44 342.9 17.1 252 305-574 133-399 (419)
197 3n9x_A Phosphotransferase; mal 100.0 4E-39 1.4E-43 338.8 22.6 199 306-509 25-253 (432)
198 2vwi_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 330.6 13.6 257 306-574 14-287 (303)
199 4aaa_A Cyclin-dependent kinase 100.0 5.6E-40 1.9E-44 333.3 15.3 264 306-574 24-306 (331)
200 3fme_A Dual specificity mitoge 100.0 1.1E-39 3.7E-44 324.7 16.5 251 306-574 6-266 (290)
201 3lm5_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 329.1 18.0 251 307-574 28-287 (327)
202 2pml_X PFPK7, Ser/Thr protein 100.0 1E-39 3.4E-44 333.8 16.4 257 306-574 30-322 (348)
203 3mwu_A Calmodulin-domain prote 100.0 3.6E-39 1.2E-43 344.6 20.4 250 306-574 21-276 (486)
204 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-39 5.7E-44 358.7 18.3 244 305-569 339-587 (674)
205 2r3i_A Cell division protein k 100.0 1.8E-39 6.1E-44 324.7 16.7 262 306-574 2-283 (299)
206 3lij_A Calcium/calmodulin depe 100.0 4.1E-39 1.4E-43 344.8 20.2 249 307-574 37-291 (494)
207 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.9E-40 2.7E-44 330.3 13.3 258 305-582 31-303 (319)
208 3nsz_A CK II alpha, casein kin 100.0 5.8E-39 2E-43 325.7 19.7 255 307-574 36-319 (330)
209 3nyv_A Calmodulin-domain prote 100.0 2E-39 6.8E-44 346.6 16.9 249 307-574 26-281 (484)
210 3qyz_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43 327.6 22.3 259 307-574 27-313 (364)
211 1wak_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 334.6 19.4 260 307-574 37-391 (397)
212 1zy4_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 320.0 20.2 251 306-574 5-283 (303)
213 1phk_A Phosphorylase kinase; g 100.0 6.9E-39 2.3E-43 320.2 19.5 251 306-574 16-283 (298)
214 3an0_A Dual specificity mitoge 100.0 1.7E-39 5.8E-44 331.1 15.3 251 306-574 50-310 (340)
215 2fst_X Mitogen-activated prote 100.0 1E-39 3.5E-44 335.5 13.5 255 307-574 29-311 (367)
216 3q5i_A Protein kinase; CDPK, m 100.0 8.1E-39 2.8E-43 343.4 21.1 250 306-574 35-301 (504)
217 3kvw_A DYRK2, dual specificity 100.0 1.3E-38 4.5E-43 334.3 22.0 197 307-512 97-303 (429)
218 2wtk_C Serine/threonine-protei 100.0 8.4E-39 2.9E-43 320.7 19.6 249 306-574 4-263 (305)
219 2xrw_A Mitogen-activated prote 100.0 7E-39 2.4E-43 330.4 19.3 260 306-574 24-318 (371)
220 3eb0_A Putative uncharacterize 100.0 5.2E-39 1.8E-43 332.9 18.3 258 305-574 5-321 (383)
221 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-38 5.1E-43 322.0 21.0 251 305-574 22-286 (326)
222 2vx3_A Dual specificity tyrosi 100.0 2.2E-38 7.4E-43 328.1 22.6 200 306-512 53-262 (382)
223 1z57_A Dual specificity protei 100.0 1.2E-38 4.1E-43 324.3 19.8 259 307-574 14-328 (339)
224 2i6l_A Mitogen-activated prote 100.0 2E-39 6.9E-44 327.3 13.6 260 307-574 11-305 (320)
225 2ycf_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 325.9 15.5 251 306-574 9-274 (322)
226 4e7w_A Glycogen synthase kinas 100.0 4.9E-39 1.7E-43 333.9 16.7 257 307-574 40-321 (394)
227 1blx_A Cyclin-dependent kinase 100.0 8.5E-39 2.9E-43 323.8 17.9 262 305-574 9-296 (326)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 7.3E-39 2.5E-43 328.1 17.3 260 306-574 10-305 (353)
229 4exu_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 328.4 19.2 255 307-574 42-323 (371)
230 3coi_A Mitogen-activated prote 100.0 2.7E-38 9.2E-43 323.9 20.7 254 307-574 24-305 (353)
231 3e3p_A Protein kinase, putativ 100.0 5.6E-39 1.9E-43 329.9 15.5 269 299-574 15-314 (360)
232 3rgf_A Cyclin-dependent kinase 100.0 4.3E-39 1.5E-43 336.1 14.8 194 312-511 26-239 (405)
233 1j1b_A Glycogen synthase kinas 100.0 1.3E-38 4.3E-43 333.6 18.2 256 307-574 54-336 (420)
234 3cek_A Dual specificity protei 100.0 1.1E-38 3.7E-43 321.2 16.8 250 306-574 27-292 (313)
235 2wei_A Calmodulin-domain prote 100.0 2.5E-38 8.6E-43 314.4 18.8 257 306-581 21-285 (287)
236 3aln_A Dual specificity mitoge 100.0 2.2E-38 7.5E-43 321.0 18.1 253 306-574 21-285 (327)
237 1q8y_A SR protein kinase; tran 100.0 3.2E-38 1.1E-42 325.8 17.9 260 307-574 19-333 (373)
238 3p23_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 331.9 16.9 248 307-574 24-283 (432)
239 2rio_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 330.7 18.4 247 310-574 18-295 (434)
240 2dyl_A Dual specificity mitoge 100.0 1.4E-37 4.6E-42 313.8 20.9 252 306-574 24-283 (318)
241 3fhr_A MAP kinase-activated pr 100.0 4.6E-38 1.6E-42 319.7 17.4 251 306-574 27-287 (336)
242 2eu9_A Dual specificity protei 100.0 1.1E-37 3.9E-42 319.2 20.0 259 307-574 19-333 (355)
243 2iwi_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 316.4 16.3 243 303-574 27-283 (312)
244 3a99_A Proto-oncogene serine/t 100.0 6.2E-38 2.1E-42 316.7 15.3 240 306-574 42-293 (320)
245 3qa8_A MGC80376 protein; kinas 100.0 9.2E-38 3.1E-42 337.9 16.0 266 306-581 13-309 (676)
246 2pzi_A Probable serine/threoni 100.0 8.1E-37 2.8E-41 339.3 18.3 239 307-580 80-327 (681)
247 3uqc_A Probable conserved tran 100.0 5.6E-36 1.9E-40 297.0 19.5 228 307-581 31-265 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 3.3E-36 1.1E-40 314.5 16.3 238 307-573 78-362 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.5E-35 5.2E-40 296.2 20.1 226 306-574 16-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 305.8 11.8 241 306-573 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 5E-29 1.7E-33 269.2 8.3 185 314-507 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 8.8E-27 3E-31 234.0 13.2 175 27-203 2-186 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.2E-26 4E-31 249.3 9.1 183 311-508 340-538 (540)
254 3e6j_A Variable lymphocyte rec 99.9 2.6E-23 9E-28 198.7 14.1 151 57-208 15-176 (229)
255 3rgz_A Protein brassinosteroid 99.9 7.3E-24 2.5E-28 238.6 11.2 175 24-202 5-211 (768)
256 2v9t_B SLIT homolog 2 protein 99.9 3.6E-23 1.2E-27 196.4 12.4 151 60-210 10-171 (220)
257 1zar_A RIO2 kinase; serine kin 99.9 2.5E-23 8.6E-28 205.0 11.1 152 301-482 84-253 (282)
258 4ecn_A Leucine-rich repeat pro 99.9 1.9E-23 6.6E-28 234.5 8.1 171 29-204 267-561 (876)
259 4fcg_A Uncharacterized protein 99.9 2.3E-23 8E-28 210.3 7.7 176 26-204 22-219 (328)
260 2v70_A SLIT-2, SLIT homolog 2 99.9 1.4E-22 4.9E-27 192.2 11.9 150 61-210 11-172 (220)
261 4eco_A Uncharacterized protein 99.9 7.7E-23 2.6E-27 225.1 8.4 173 30-204 29-318 (636)
262 2o6s_A Variable lymphocyte rec 99.9 8.6E-22 2.9E-26 185.3 13.6 150 59-208 5-165 (208)
263 3oja_A Leucine-rich immune mol 99.8 3.3E-22 1.1E-26 212.8 -1.2 146 60-208 108-254 (487)
264 3m19_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 179.4 13.0 137 70-206 57-194 (251)
265 3rgz_A Protein brassinosteroid 99.8 1.5E-20 5.1E-25 211.7 10.8 125 92-217 628-752 (768)
266 1p9a_G Platelet glycoprotein I 99.8 4.9E-20 1.7E-24 182.5 13.3 139 70-209 75-213 (290)
267 2wfh_A SLIT homolog 2 protein 99.8 4.4E-20 1.5E-24 171.2 11.8 132 75-210 13-145 (193)
268 1w8a_A SLIT protein; signaling 99.8 6.9E-20 2.4E-24 169.8 11.7 133 75-210 11-145 (192)
269 3m19_A Variable lymphocyte rec 99.8 7.1E-20 2.4E-24 177.5 12.2 133 72-204 35-168 (251)
270 3rfs_A Internalin B, repeat mo 99.8 1.2E-19 4.2E-24 178.0 13.3 139 70-208 83-222 (272)
271 1ogq_A PGIP-2, polygalacturona 99.8 2.5E-20 8.5E-25 186.9 8.2 138 73-213 175-312 (313)
272 1w8a_A SLIT protein; signaling 99.8 2.7E-20 9.4E-25 172.6 7.3 151 60-210 7-168 (192)
273 2o6q_A Variable lymphocyte rec 99.8 2E-19 6.8E-24 176.4 13.4 138 71-208 84-222 (270)
274 2o6q_A Variable lymphocyte rec 99.8 4.3E-19 1.5E-23 174.0 13.5 132 72-203 37-169 (270)
275 1zth_A RIO1 serine protein kin 99.8 1.1E-19 3.7E-24 176.7 8.5 137 309-458 49-220 (258)
276 2xot_A Amphoterin-induced prot 99.8 1.4E-19 4.9E-24 185.1 9.3 139 71-209 63-207 (361)
277 2o6r_A Variable lymphocyte rec 99.8 6.7E-19 2.3E-23 160.9 12.2 129 77-208 12-141 (177)
278 1ozn_A Reticulon 4 receptor; N 99.8 2.8E-19 9.5E-24 176.8 9.3 140 71-210 104-244 (285)
279 3v47_A TOLL-like receptor 5B a 99.8 8.2E-19 2.8E-23 185.4 11.2 138 72-209 275-413 (455)
280 4g8a_A TOLL-like receptor 4; l 99.8 1.6E-18 5.4E-23 190.9 12.6 133 72-204 52-186 (635)
281 2z66_A Variable lymphocyte rec 99.8 1.5E-18 5.2E-23 173.3 10.7 139 71-209 125-266 (306)
282 2ell_A Acidic leucine-rich nuc 99.7 2E-18 6.7E-23 156.4 8.8 131 71-203 23-159 (168)
283 2wfh_A SLIT homolog 2 protein 99.7 1.7E-18 5.7E-23 160.5 7.8 123 61-184 10-142 (193)
284 2z62_A TOLL-like receptor 4, v 99.7 5.2E-18 1.8E-22 166.8 10.9 138 71-208 75-241 (276)
285 3vq2_A TLR4, TOLL-like recepto 99.7 2.8E-18 9.6E-23 188.2 10.0 140 71-210 423-564 (606)
286 4g8a_A TOLL-like receptor 4; l 99.7 4.4E-18 1.5E-22 187.4 11.3 140 71-210 444-586 (635)
287 3zyj_A Leucine-rich repeat-con 99.7 5.2E-18 1.8E-22 178.4 11.3 138 71-210 135-298 (440)
288 2je0_A Acidic leucine-rich nuc 99.7 2.5E-18 8.6E-23 152.3 7.3 128 71-200 16-149 (149)
289 2z62_A TOLL-like receptor 4, v 99.7 1.3E-17 4.4E-22 163.9 11.7 132 72-203 28-161 (276)
290 3zyi_A Leucine-rich repeat-con 99.7 1.1E-17 3.7E-22 176.7 11.4 138 71-210 146-309 (452)
291 2v70_A SLIT-2, SLIT homolog 2 99.7 4.4E-18 1.5E-22 161.3 6.8 116 70-185 55-170 (220)
292 1ozn_A Reticulon 4 receptor; N 99.7 2.4E-17 8.2E-22 162.8 12.0 133 71-203 31-165 (285)
293 3v47_A TOLL-like receptor 5B a 99.7 1.6E-17 5.4E-22 175.5 9.5 146 59-204 6-167 (455)
294 1p9a_G Platelet glycoprotein I 99.7 4.7E-17 1.6E-21 161.0 12.3 130 71-203 54-184 (290)
295 3rfs_A Internalin B, repeat mo 99.7 5.2E-17 1.8E-21 159.2 12.5 132 71-204 62-194 (272)
296 4fcg_A Uncharacterized protein 99.7 1.6E-17 5.6E-22 167.4 8.5 132 71-205 103-243 (328)
297 2z80_A TOLL-like receptor 2, v 99.7 2.5E-17 8.5E-22 168.0 9.7 145 58-203 27-186 (353)
298 2v9t_B SLIT homolog 2 protein 99.7 6.7E-17 2.3E-21 153.0 12.0 133 65-204 8-141 (220)
299 3o53_A Protein LRIM1, AGAP0063 99.7 1.8E-17 6.3E-22 166.3 8.4 144 62-208 110-254 (317)
300 3e6j_A Variable lymphocyte rec 99.7 6.8E-17 2.3E-21 154.1 11.8 136 62-204 13-148 (229)
301 3vq2_A TLR4, TOLL-like recepto 99.7 4.5E-17 1.5E-21 178.6 11.7 134 71-204 31-166 (606)
302 2xwt_C Thyrotropin receptor; s 99.7 3.2E-17 1.1E-21 157.5 9.3 132 71-204 30-169 (239)
303 2id5_A Lingo-1, leucine rich r 99.7 5.4E-17 1.9E-21 172.5 11.7 134 71-204 31-165 (477)
304 2z81_A CD282 antigen, TOLL-lik 99.7 3.3E-17 1.1E-21 177.4 9.7 144 60-204 3-161 (549)
305 4ezg_A Putative uncharacterize 99.7 5.8E-17 2E-21 150.8 9.9 128 71-203 65-193 (197)
306 3t6q_A CD180 antigen; protein- 99.7 3E-17 1E-21 179.9 9.0 139 71-210 424-566 (606)
307 3zyj_A Leucine-rich repeat-con 99.7 8.4E-17 2.9E-21 169.2 12.0 134 71-204 63-198 (440)
308 3zyi_A Leucine-rich repeat-con 99.7 9.4E-17 3.2E-21 169.4 12.3 142 63-204 56-209 (452)
309 1ziw_A TOLL-like receptor 3; i 99.7 4.7E-17 1.6E-21 180.9 10.4 139 71-209 479-627 (680)
310 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 5.8E-17 2E-21 175.9 10.5 137 71-210 352-516 (562)
311 2z63_A TOLL-like receptor 4, v 99.7 5.4E-17 1.8E-21 176.5 10.2 139 71-209 395-536 (570)
312 1a9n_A U2A', U2A'; complex (nu 99.7 6.5E-17 2.2E-21 147.5 8.9 128 71-203 18-152 (176)
313 3g39_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 144.5 10.5 110 75-187 12-121 (170)
314 4b8c_D Glucose-repressible alc 99.7 4.9E-17 1.7E-21 180.9 9.3 174 28-205 129-330 (727)
315 2z7x_B TOLL-like receptor 1, v 99.7 5.8E-17 2E-21 174.3 9.6 135 73-210 349-487 (520)
316 3j0a_A TOLL-like receptor 5; m 99.7 1E-16 3.6E-21 182.2 12.2 136 71-210 425-566 (844)
317 3oja_B Anopheles plasmodium-re 99.7 7E-17 2.4E-21 176.5 9.7 133 72-204 51-184 (597)
318 3o6n_A APL1; leucine-rich repe 99.7 6.6E-17 2.3E-21 167.2 9.0 133 72-204 45-178 (390)
319 3t6q_A CD180 antigen; protein- 99.7 1.6E-16 5.6E-21 174.1 11.4 134 71-204 32-166 (606)
320 3j0a_A TOLL-like receptor 5; m 99.7 1.6E-16 5.4E-21 180.7 11.5 143 61-204 14-161 (844)
321 2o6s_A Variable lymphocyte rec 99.7 1.5E-16 5E-21 149.4 9.3 129 70-204 50-178 (208)
322 2o6r_A Variable lymphocyte rec 99.7 1.8E-16 6E-21 144.8 9.6 127 60-186 6-142 (177)
323 2r9u_A Variable lymphocyte rec 99.7 3E-16 1E-20 142.7 10.7 110 75-187 15-124 (174)
324 3g39_A Variable lymphocyte rec 99.7 3.8E-16 1.3E-20 141.4 11.0 109 97-208 10-119 (170)
325 2z66_A Variable lymphocyte rec 99.7 1.7E-16 5.9E-21 158.3 9.6 133 71-204 77-212 (306)
326 2id5_A Lingo-1, leucine rich r 99.6 9.6E-17 3.3E-21 170.6 7.6 140 71-210 175-339 (477)
327 4gyi_A RIO2 kinase; protein ki 99.6 1.6E-16 5.3E-21 160.5 8.1 140 307-458 95-266 (397)
328 4ezg_A Putative uncharacterize 99.6 1.6E-16 5.4E-21 147.8 7.1 128 71-203 43-171 (197)
329 2r9u_A Variable lymphocyte rec 99.6 3.9E-16 1.4E-20 141.8 9.6 107 99-208 15-122 (174)
330 1ziw_A TOLL-like receptor 3; i 99.6 4.2E-16 1.4E-20 173.2 11.6 134 71-204 24-158 (680)
331 2ft3_A Biglycan; proteoglycan, 99.6 9.5E-16 3.3E-20 154.8 11.9 140 61-204 33-185 (332)
332 1xku_A Decorin; proteoglycan, 99.6 7.4E-16 2.5E-20 155.5 10.7 141 60-203 30-183 (330)
333 4eco_A Uncharacterized protein 99.6 2.6E-16 8.8E-21 173.1 7.1 143 61-204 193-366 (636)
334 2z81_A CD282 antigen, TOLL-lik 99.6 7.4E-16 2.5E-20 166.8 10.4 134 72-209 361-515 (549)
335 1dce_A Protein (RAB geranylger 99.6 8E-16 2.7E-20 165.9 10.4 121 73-198 442-567 (567)
336 3o6n_A APL1; leucine-rich repe 99.6 1.9E-15 6.4E-20 156.3 11.8 131 71-203 68-198 (390)
337 2z63_A TOLL-like receptor 4, v 99.6 1.2E-15 4.2E-20 165.7 10.9 134 71-204 27-162 (570)
338 2xwt_C Thyrotropin receptor; s 99.6 4.9E-16 1.7E-20 149.1 6.6 131 70-202 53-190 (239)
339 3oja_B Anopheles plasmodium-re 99.6 1.8E-15 6E-20 165.4 11.8 131 71-203 74-204 (597)
340 1xeu_A Internalin C; cellular 99.6 1.6E-15 5.5E-20 147.6 10.3 126 71-206 62-187 (263)
341 4glp_A Monocyte differentiatio 99.6 1E-15 3.4E-20 153.1 8.8 131 71-204 144-285 (310)
342 1wwl_A Monocyte differentiatio 99.6 5.4E-16 1.8E-20 155.2 6.8 134 70-204 119-266 (312)
343 2ft3_A Biglycan; proteoglycan, 99.6 2.4E-15 8.2E-20 151.9 11.5 132 73-204 124-277 (332)
344 1xku_A Decorin; proteoglycan, 99.6 2.9E-15 9.8E-20 151.1 11.7 132 72-203 121-275 (330)
345 2z80_A TOLL-like receptor 2, v 99.6 6.3E-16 2.1E-20 157.6 6.8 133 70-203 74-210 (353)
346 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.8E-15 6.2E-20 164.2 10.7 128 71-203 51-181 (562)
347 1h6t_A Internalin B; cell adhe 99.6 2.9E-15 1E-19 148.1 11.2 125 71-204 67-191 (291)
348 1wwl_A Monocyte differentiatio 99.6 3.7E-16 1.3E-20 156.4 4.8 134 71-205 94-242 (312)
349 2ifg_A High affinity nerve gro 99.6 2.4E-15 8.1E-20 152.9 10.0 135 61-209 8-146 (347)
350 4ecn_A Leucine-rich repeat pro 99.6 8.4E-16 2.9E-20 172.7 7.1 142 61-204 435-608 (876)
351 2xot_A Amphoterin-induced prot 99.6 3.1E-15 1E-19 152.9 10.1 144 61-204 18-176 (361)
352 4glp_A Monocyte differentiatio 99.6 1.4E-15 4.7E-20 152.1 7.0 130 70-204 167-307 (310)
353 1h6u_A Internalin H; cell adhe 99.6 2.7E-15 9.2E-20 149.7 9.0 129 69-206 82-210 (308)
354 2z7x_B TOLL-like receptor 1, v 99.6 1.9E-15 6.4E-20 162.4 7.7 127 72-203 21-150 (520)
355 1h6t_A Internalin B; cell adhe 99.6 4.1E-15 1.4E-19 147.1 9.4 128 69-205 87-214 (291)
356 3oja_A Leucine-rich immune mol 99.6 3.3E-15 1.1E-19 158.8 9.0 128 72-204 99-227 (487)
357 1ds9_A Outer arm dynein; leuci 99.6 1.7E-17 5.7E-22 154.6 -7.9 132 72-208 18-157 (198)
358 1h6u_A Internalin H; cell adhe 99.6 7.2E-15 2.4E-19 146.6 10.7 125 71-204 62-186 (308)
359 1xeu_A Internalin C; cellular 99.6 6.2E-15 2.1E-19 143.5 9.8 126 71-206 40-165 (263)
360 2ifg_A High affinity nerve gro 99.6 5.5E-15 1.9E-19 150.2 9.4 110 99-210 11-122 (347)
361 2ell_A Acidic leucine-rich nuc 99.5 3.8E-15 1.3E-19 134.6 6.3 114 71-186 48-165 (168)
362 4b8c_D Glucose-repressible alc 99.5 1.6E-15 5.5E-20 168.7 4.4 132 70-205 222-355 (727)
363 2je0_A Acidic leucine-rich nuc 99.5 5.1E-15 1.7E-19 130.9 6.6 108 94-203 15-125 (149)
364 4fmz_A Internalin; leucine ric 99.5 1E-14 3.5E-19 148.1 9.1 128 71-206 198-326 (347)
365 3o53_A Protein LRIM1, AGAP0063 99.5 7.6E-15 2.6E-19 147.1 7.9 128 72-204 99-227 (317)
366 1m9s_A Internalin B; cell inva 99.5 1.8E-14 6E-19 156.4 11.3 124 71-203 64-187 (605)
367 3cvr_A Invasion plasmid antige 99.5 4.8E-15 1.7E-19 159.1 6.0 134 50-203 33-172 (571)
368 1m9s_A Internalin B; cell inva 99.5 2.8E-14 9.4E-19 154.9 9.8 126 70-204 85-210 (605)
369 4ay9_X Follicle-stimulating ho 99.5 3.8E-14 1.3E-18 144.1 8.7 143 61-203 9-166 (350)
370 1ds9_A Outer arm dynein; leuci 99.5 4.3E-16 1.5E-20 144.9 -5.9 125 71-202 47-183 (198)
371 1o6v_A Internalin A; bacterial 99.5 5.8E-14 2E-18 148.6 9.7 126 71-205 242-367 (466)
372 1a9n_A U2A', U2A'; complex (nu 99.5 3.9E-14 1.3E-18 129.0 6.6 111 90-204 13-126 (176)
373 1dce_A Protein (RAB geranylger 99.5 1.1E-14 3.6E-19 157.2 2.8 120 74-204 425-546 (567)
374 1o6v_A Internalin A; bacterial 99.4 2E-13 7E-18 144.4 10.7 127 71-206 220-346 (466)
375 3cvr_A Invasion plasmid antige 99.4 1.4E-13 4.8E-18 147.8 8.8 101 69-185 97-197 (571)
376 4fmz_A Internalin; leucine ric 99.4 2.4E-13 8.2E-18 137.9 9.8 124 71-203 176-299 (347)
377 3bz5_A Internalin-J, INLJ; leu 99.4 3.4E-13 1.2E-17 142.0 11.2 120 71-203 41-160 (457)
378 3g06_A SSPH2 (leucine-rich rep 99.4 9.3E-14 3.2E-18 151.0 3.9 134 50-202 12-152 (622)
379 2ca6_A RAN GTPase-activating p 99.4 2.8E-14 9.6E-19 147.2 -0.4 133 72-204 159-316 (386)
380 3bz5_A Internalin-J, INLJ; leu 99.4 1.3E-12 4.3E-17 137.6 12.1 130 61-203 95-224 (457)
381 2ast_B S-phase kinase-associat 99.4 4.2E-14 1.4E-18 142.8 0.5 130 72-202 70-206 (336)
382 2ast_B S-phase kinase-associat 99.4 2.2E-14 7.4E-19 145.0 -3.1 133 71-203 92-234 (336)
383 3g06_A SSPH2 (leucine-rich rep 99.3 2.1E-12 7.1E-17 140.4 11.3 56 144-203 241-296 (622)
384 3goz_A Leucine-rich repeat-con 99.3 9.3E-14 3.2E-18 141.9 0.4 132 72-203 22-179 (362)
385 1jl5_A Outer protein YOPM; leu 99.3 3E-12 1E-16 134.6 11.5 117 72-203 111-227 (454)
386 2ca6_A RAN GTPase-activating p 99.3 8.7E-14 3E-18 143.5 -1.6 131 72-202 94-255 (386)
387 3tm0_A Aminoglycoside 3'-phosp 99.3 5.2E-12 1.8E-16 122.8 10.4 148 301-455 8-212 (263)
388 4ay9_X Follicle-stimulating ho 99.3 3.3E-12 1.1E-16 129.7 8.5 124 76-202 13-139 (350)
389 3goz_A Leucine-rich repeat-con 99.3 5.7E-13 1.9E-17 136.1 2.3 129 76-204 2-151 (362)
390 1jl5_A Outer protein YOPM; leu 99.3 9.2E-12 3.1E-16 130.9 11.1 119 71-204 90-208 (454)
391 1z7x_W Ribonuclease inhibitor; 99.2 5.9E-13 2E-17 140.5 -3.9 133 71-203 226-382 (461)
392 1nd4_A Aminoglycoside 3'-phosp 99.2 7.4E-11 2.5E-15 114.2 10.0 136 308-455 21-213 (264)
393 1z7x_W Ribonuclease inhibitor; 99.1 3.9E-12 1.3E-16 134.3 -2.5 130 73-202 86-238 (461)
394 3un9_A NLR family member X1; l 99.1 6.3E-12 2.2E-16 128.3 -2.8 132 72-203 101-251 (372)
395 3dxp_A Putative acyl-COA dehyd 99.0 7.5E-10 2.6E-14 112.7 10.9 142 311-456 42-248 (359)
396 3sg8_A APH(2'')-ID; antibiotic 99.0 4.4E-10 1.5E-14 111.6 7.6 186 312-508 25-287 (304)
397 3rw6_A Nuclear RNA export fact 99.0 2.9E-11 9.8E-16 116.3 -2.0 64 118-183 168-235 (267)
398 3sb4_A Hypothetical leucine ri 99.0 6.7E-10 2.3E-14 111.6 7.9 129 71-202 100-308 (329)
399 3sb4_A Hypothetical leucine ri 98.9 1.7E-09 5.9E-14 108.6 9.1 102 95-198 225-328 (329)
400 3un9_A NLR family member X1; l 98.9 2.3E-11 7.8E-16 124.2 -5.0 132 72-203 72-223 (372)
401 3rw6_A Nuclear RNA export fact 98.7 1.8E-09 6.1E-14 103.7 1.5 80 93-174 167-257 (267)
402 3ogk_B Coronatine-insensitive 98.7 2.8E-09 9.6E-14 116.0 2.6 104 73-177 139-252 (592)
403 3ogk_B Coronatine-insensitive 98.7 4.2E-10 1.4E-14 122.6 -3.9 131 72-202 378-524 (592)
404 3r70_A Aminoglycoside phosphot 98.7 1.5E-07 5.2E-12 93.9 14.1 144 301-457 28-238 (320)
405 1io0_A Tropomodulin; LRR prote 98.7 1.8E-09 6.3E-14 98.6 -0.1 111 71-181 35-164 (185)
406 3d1u_A Putative fructosamine-3 98.6 4.3E-07 1.5E-11 88.9 14.2 139 311-455 19-215 (288)
407 1io0_A Tropomodulin; LRR prote 98.6 2.7E-09 9.2E-14 97.5 -1.8 116 87-202 27-162 (185)
408 2p1m_B Transport inhibitor res 98.5 2.1E-09 7.3E-14 117.0 -4.7 130 72-202 372-517 (594)
409 3tdw_A Gentamicin resistance p 98.5 1.4E-06 4.6E-11 86.3 15.0 136 312-456 24-224 (306)
410 2p1m_B Transport inhibitor res 98.5 1E-08 3.4E-13 111.7 -2.2 130 71-201 104-245 (594)
411 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.6E-06 5.5E-11 87.8 12.0 144 309-458 43-245 (362)
412 4gkh_A Aminoglycoside 3'-phosp 98.4 2.3E-06 8E-11 82.9 12.5 135 313-455 30-222 (272)
413 4fdw_A Leucine rich hypothetic 98.4 5.7E-07 1.9E-11 92.5 8.4 126 72-203 226-357 (401)
414 2ra8_A Uncharacterized protein 98.4 5.5E-08 1.9E-12 98.3 0.6 128 71-202 171-318 (362)
415 4fdw_A Leucine rich hypothetic 98.4 6.3E-07 2.2E-11 92.1 8.2 125 72-201 203-333 (401)
416 3ats_A Putative uncharacterize 98.3 8.9E-07 3E-11 89.7 8.8 81 312-392 25-122 (357)
417 2ra8_A Uncharacterized protein 98.3 1.4E-07 4.8E-12 95.4 1.0 130 71-202 192-341 (362)
418 2q83_A YTAA protein; 2635576, 98.1 3.1E-05 1E-09 77.6 13.8 138 313-455 38-251 (346)
419 3rfe_A Platelet glycoprotein I 98.0 4.8E-06 1.7E-10 70.7 5.8 61 148-210 12-74 (130)
420 3e4g_A ATP synthase subunit S, 98.0 1.4E-06 4.8E-11 77.6 2.1 82 97-178 62-149 (176)
421 2olc_A MTR kinase, methylthior 98.0 3.4E-05 1.2E-09 79.1 11.3 75 312-388 35-120 (397)
422 3f7w_A Putative fructosamine-3 97.9 4.5E-05 1.5E-09 74.5 11.0 78 309-390 17-97 (288)
423 3jr1_A Putative fructosamine-3 97.9 8.6E-05 2.9E-09 73.1 12.8 138 310-452 39-232 (312)
424 3e4g_A ATP synthase subunit S, 97.9 3.8E-06 1.3E-10 74.8 2.2 87 72-158 61-154 (176)
425 4gt6_A Cell surface protein; l 97.7 7.3E-05 2.5E-09 76.6 7.9 116 83-202 252-368 (394)
426 1pgv_A TMD-1, tropomodulin TMD 97.6 1.2E-05 4E-10 73.0 0.5 62 72-133 41-111 (197)
427 2pyw_A Uncharacterized protein 97.6 0.00038 1.3E-08 71.9 11.9 79 425-504 231-312 (420)
428 2ppq_A HSK, HK, homoserine kin 97.5 0.00048 1.6E-08 68.2 11.3 157 296-455 6-216 (322)
429 4gt6_A Cell surface protein; l 97.5 0.0002 6.9E-09 73.2 8.3 124 72-201 265-388 (394)
430 4h09_A Hypothetical leucine ri 97.5 0.00031 1E-08 71.4 9.3 125 73-201 218-343 (379)
431 3rfe_A Platelet glycoprotein I 97.4 0.00022 7.4E-09 60.4 6.2 54 76-131 12-66 (130)
432 3dxq_A Choline/ethanolamine ki 97.4 0.00062 2.1E-08 66.7 10.2 139 309-456 20-202 (301)
433 4fs7_A Uncharacterized protein 97.4 0.00033 1.1E-08 71.6 8.1 105 91-201 271-376 (394)
434 4fs7_A Uncharacterized protein 97.3 0.00066 2.3E-08 69.4 9.2 124 72-201 71-195 (394)
435 4h09_A Hypothetical leucine ri 97.3 0.0005 1.7E-08 69.8 8.1 108 72-183 240-347 (379)
436 1zyl_A Hypothetical protein YI 97.2 0.0027 9.1E-08 62.9 12.6 157 296-456 10-223 (328)
437 3csv_A Aminoglycoside phosphot 97.2 0.0029 9.8E-08 62.9 12.5 140 313-457 24-218 (333)
438 1pgv_A TMD-1, tropomodulin TMD 97.1 5.9E-05 2E-09 68.4 -0.4 91 89-179 34-137 (197)
439 2yle_A Protein spire homolog 1 97.1 0.0033 1.1E-07 57.3 10.7 103 388-507 33-135 (229)
440 1nw1_A Choline kinase (49.2 KD 97.1 0.0012 4E-08 68.3 8.8 73 312-390 78-159 (429)
441 3feg_A Choline/ethanolamine ki 96.9 0.0036 1.2E-07 63.2 10.0 139 313-456 56-254 (379)
442 3c5i_A Choline kinase; choline 96.8 0.0034 1.2E-07 63.4 9.0 73 313-390 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.7 0.0055 1.9E-07 61.0 9.8 32 425-456 205-236 (339)
444 2qg7_A Ethanolamine kinase PV0 96.6 0.0095 3.3E-07 61.8 11.0 74 312-390 113-188 (458)
445 3f2s_A CK, chetk-alpha, cholin 96.1 0.018 6.2E-07 58.4 9.6 139 313-455 58-279 (401)
446 3mes_A Choline kinase; malaria 94.5 0.096 3.3E-06 53.5 8.6 139 312-456 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 91.0 0.28 9.7E-06 49.8 6.3 30 427-456 245-280 (401)
448 2ks1_B Epidermal growth factor 89.1 0.22 7.5E-06 32.4 2.2 26 244-269 13-38 (44)
449 4ann_A ESSB; membrane protein, 88.5 1.3 4.4E-05 40.2 7.7 117 361-510 43-159 (215)
450 2l2t_A Receptor tyrosine-prote 86.4 0.41 1.4E-05 31.0 2.3 26 244-269 12-37 (44)
451 4ano_A ESSB; membrane protein, 86.0 2.5 8.4E-05 38.5 8.1 115 361-510 48-164 (219)
452 2jwa_A Receptor tyrosine-prote 84.8 0.37 1.3E-05 31.2 1.5 26 245-270 14-39 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 75.6 0.3 1E-05 50.6 -2.1 59 311-372 146-213 (463)
454 2lz0_A Uncharacterized protein 62.1 19 0.00065 28.0 6.3 44 84-128 8-51 (100)
455 2lz0_A Uncharacterized protein 60.3 17 0.00057 28.3 5.7 47 107-154 7-53 (100)
456 2k9y_A Ephrin type-A receptor 55.7 4.7 0.00016 25.6 1.4 13 244-256 15-27 (41)
457 2k1k_A Ephrin type-A receptor 40.2 15 0.0005 22.9 1.8 6 247-252 15-20 (38)
458 3ls8_A Phosphatidylinositol 3- 38.3 3.8E+02 0.013 28.2 13.7 46 403-455 454-501 (614)
459 2klu_A T-cell surface glycopro 37.9 20 0.00069 25.1 2.3 11 245-255 13-23 (70)
460 1cja_A Protein (actin-fragmin 36.7 1.3E+02 0.0044 29.0 8.7 135 313-456 75-237 (342)
461 1iij_A ERBB-2 receptor protein 26.1 20 0.00067 21.9 0.6 12 247-258 12-23 (35)
462 2fq3_A Transcription regulator 24.0 94 0.0032 24.2 4.3 46 532-577 33-78 (104)
463 2y3a_A Phosphatidylinositol-4, 22.6 74 0.0025 36.2 4.9 25 431-455 940-964 (1092)
464 3hhm_A Phosphatidylinositol-4, 21.9 1.1E+02 0.0039 34.6 6.2 61 388-455 898-961 (1091)
465 2l8s_A Integrin alpha-1; trans 21.3 65 0.0022 21.7 2.5 17 241-257 9-25 (54)
466 2wxf_A Phosphatidylinositol-4, 20.7 70 0.0024 35.8 4.2 25 431-455 788-812 (940)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.3e-56 Score=439.93 Aligned_cols=257 Identities=21% Similarity=0.392 Sum_probs=214.1
Q ss_pred cCCCccceeeecCceEEEEEEEc------CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|...+.||+|+||+||+|.+. ++..||||+++.......+.|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777899999999999999874 478899999988777777889999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEE
Q 007959 381 IYDFLPGGSLDEALHERS------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 448 (583)
||||+++|+|.++|+... ..++|..++.|+.|||+||+|||+ ++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 469999999999999999999995 49999999999999999999999
Q ss_pred eecCcccccCcCCcee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007959 449 SDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (583)
Q Consensus 449 ~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (583)
+|||+|+......... .....||++|||||++.+..|+.++|||||||++|||+| |+.||...... .+ ....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~---~~---~~~i 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EV---IECI 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HH---HHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HH---HHHH
Confidence 9999998765443332 234569999999999999999999999999999999999 89999764322 11 1111
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
..... ...+...+.++.+|+.+||+.||++|||++||.+.|+++..
T Consensus 244 ~~~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 244 TQGRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111 11223345678999999999999999999999999998754
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-55 Score=440.80 Aligned_cols=257 Identities=22% Similarity=0.406 Sum_probs=207.6
Q ss_pred cCCCccceeeecCceEEEEEEEc------CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|...+.||+|+||+||+|.+. ++..||||+++.......+.|.+|+++|++++|||||+++|+|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999875 478999999988777777889999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcE
Q 007959 381 IYDFLPGGSLDEALHERS--------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEA 446 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 446 (583)
||||+++|+|.++++... ..++|.+++.|+.|||+||+|||+ .+|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997642 359999999999999999999995 599999999999999999999
Q ss_pred EEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHH
Q 007959 447 RVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLN 524 (583)
Q Consensus 447 kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 524 (583)
||+|||+++....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||......+ . ..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~---~---~~ 271 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE---A---ID 271 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---H---HH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---H---HH
Confidence 9999999987654332 22344679999999999999999999999999999999999 899997543221 1 11
Q ss_pred HHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 525 FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
......+ ...+...+.++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 272 ~i~~g~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 272 CITQGRE---------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHTCC---------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCC---------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1111111 01123344678999999999999999999999999998764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.5e-55 Score=434.48 Aligned_cols=255 Identities=21% Similarity=0.363 Sum_probs=209.8
Q ss_pred cCCCccceeeecCceEEEEEEEc------CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
.+++..+.||+|+||+||+|.+. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34556789999999999999873 46789999997543 334578999999999999999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC
Q 007959 380 LIYDFLPGGSLDEALHER---------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL 444 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 444 (583)
+||||+++|+|.++|+.+ ...++|..++.|+.|||+||+|||+ .+||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence 999999999999999653 2359999999999999999999995 4899999999999999999
Q ss_pred cEEEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHH
Q 007959 445 EARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGW 522 (583)
Q Consensus 445 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~ 522 (583)
.+||+|||+++.....+. .......||++|||||++.++.|+.++|||||||++|||+| |+.||...... .+.
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~---~~~-- 257 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVV-- 257 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH---HHH--
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH---HHH--
Confidence 999999999987654332 22344679999999999999999999999999999999999 89999764322 111
Q ss_pred HHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 007959 523 LNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (583)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~ 579 (583)
........ ...+...+.++.+++.+||+.||++||||+||++.|++.
T Consensus 258 -~~i~~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 258 -EMIRNRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HHHHcCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111111 112234457789999999999999999999999999874
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2e-54 Score=429.07 Aligned_cols=259 Identities=25% Similarity=0.433 Sum_probs=207.1
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.+++...+.||+|+||+||+|.+.+ .||||.++.. .....+.|.+|++++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999998754 5899998643 33445789999999999999999999999865 56899999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC-c
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-S 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-~ 462 (583)
|+++|+|.++++.....++|..++.|+.|||+||+|||+ .+||||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999998777789999999999999999999995 599999999999999999999999999998765432 2
Q ss_pred eeeeeecccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... ........ ....+.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~------~~~~~~~~----~~~~p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGR----GYASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHT----TCCCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH------HHHHHHhc----CCCCCC
Confidence 23345689999999999864 468999999999999999999999997532211 11111111 112223
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
....+...+.++.+++.+||+.||++||||+||++.|+.+-
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 33344455678999999999999999999999999998654
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.5e-53 Score=426.96 Aligned_cols=271 Identities=26% Similarity=0.392 Sum_probs=219.2
Q ss_pred CCCCHHHHHHHhcCCCccceeeecCceEEEEEEEcC------CcEEEEEeecccc-hhhHHHHHHHHHHHHhCCC-Ccee
Q 007959 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLN-EGFDRFFERELEILGSIKH-RYLV 366 (583)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv 366 (583)
.++...+.+...++|+..+.||+|+||+||+|.+.. ++.||||++.... ....+.|.+|+++|.+++| ||||
T Consensus 52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 345556666667889999999999999999998653 3579999997643 3345679999999999965 8999
Q ss_pred eeeeeeeCC-CceEEEEEcCCCCchhhHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 007959 367 NLRGYCNSP-TSKLLIYDFLPGGSLDEALHER---------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIH 430 (583)
Q Consensus 367 ~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 430 (583)
+++|+|.++ ...++|||||++|+|.++|+.. ...+++..++.++.|||+||+|||+ .+|||
T Consensus 132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiH 208 (353)
T 4ase_A 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIH 208 (353)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeec
Confidence 999999664 5689999999999999999753 2348999999999999999999995 59999
Q ss_pred cCCCCCCeEecCCCcEEEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCC
Q 007959 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPT 508 (583)
Q Consensus 431 ~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~ 508 (583)
|||||+|||+++++.+||+|||+|+....+.. .......||+.|||||++.+..|+.++|||||||++|||+| |+.||
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf 288 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCC
Confidence 99999999999999999999999997655433 33345679999999999999999999999999999999998 99999
Q ss_pred CcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....... . +...+.... .+ ..+...+.++.+++.+||+.||++|||++||++.|+++++.
T Consensus 289 ~~~~~~~--~----~~~~i~~g~-----~~---~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 289 PGVKIDE--E----FCRRLKEGT-----RM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp TTCCCSH--H----HHHHHHHTC-----CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHH--H----HHHHHHcCC-----CC---CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 7543221 1 111111111 01 11223346789999999999999999999999999998764
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-52 Score=418.84 Aligned_cols=267 Identities=24% Similarity=0.346 Sum_probs=204.4
Q ss_pred CCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC----ceEEEEE
Q 007959 308 TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT----SKLLIYD 383 (583)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e 383 (583)
+|...+.||+|+||+||+|.+ +|+.||||++..... ....++.|+..+.+++|||||+++|+|.+++ ..++|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 456678999999999999988 589999999975432 2333455666777899999999999997653 5789999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
|+++|+|.++++. ..++|..+.+++.|+++||+|||+++ +++|+||||||+|||++.++.+||+|||+++...
T Consensus 82 y~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999999975 45999999999999999999999642 4589999999999999999999999999998765
Q ss_pred cCCcee---eeeeccccccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCcchhccc---------chHH
Q 007959 459 DEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG---------LNIV 520 (583)
Q Consensus 459 ~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~---------~~~~ 520 (583)
...... ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+........ ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 443322 2345799999999998754 467899999999999999999888754221110 0111
Q ss_pred HHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 521 GWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
. ....... ...++.++. ...+.+..+.+|+.+||+.||++||||+||++.|+++.++|
T Consensus 240 ~-~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 E-MRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp H-HHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred H-HHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1 1111111 122233322 22356678999999999999999999999999999987654
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.3e-53 Score=424.15 Aligned_cols=250 Identities=25% Similarity=0.406 Sum_probs=203.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 468999999999999999999865 6899999999753 3344567999999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 383 DFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 383 e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
||+++|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999764 4458999999999999999999995 599999999999999999999999999998765432
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .......... .+
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~---------~~ 243 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIISGS---------FP 243 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTC---------CC
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHcCC---------CC
Confidence 1233467999999999999999999999999999999999999999764322 1111111111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+.++.+|+.+||+.||++|||++|+++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122334567899999999999999999999975
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.6e-52 Score=413.73 Aligned_cols=255 Identities=23% Similarity=0.302 Sum_probs=207.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||+||+|... +|+.||||+++.... ..+|+.++++++|||||++++++.+++..++||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 456777889999999999999875 589999999975322 24699999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC-cEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-EARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++|+|.++++. .+.+++..+..++.||+.||+||| +.+|+||||||+|||++.++ ++||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQ-MGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999976 457999999999999999999999 55999999999999999887 6999999999977644321
Q ss_pred e----eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 464 I----TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 464 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
. ....+||+.|||||++.+..|+.++||||+||++|||+||+.||........ .. ........
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~i~~~~~~------- 274 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CL---KIASEPPP------- 274 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HH---HHHHSCCG-------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---HHHcCCCC-------
Confidence 1 2335799999999999999999999999999999999999999976433221 11 11111110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....++..+..+.+++.+||+.||++|||++|+++.|...+.+
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 1112234457789999999999999999999999999877643
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.3e-52 Score=415.00 Aligned_cols=249 Identities=22% Similarity=0.380 Sum_probs=209.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45788899999999999999876 68999999997655555667899999999999999999999999999999999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceee
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 465 (583)
++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+..... ..
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 99999999975 469999999999999999999995 4999999999999999999999999999997765432 23
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCH
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (583)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ . ..... .. ..+... ...
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~---~~~i~-~~-----~~~~~~-~~~ 294 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---A---MKMIR-DN-----LPPRLK-NLH 294 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHH-HS-----SCCCCS-CGG
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---H---HHHHH-cC-----CCCCCC-ccc
Confidence 45689999999999999999999999999999999999999997543221 1 11111 11 111111 123
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 546 ~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+.++.+|+.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 34577899999999999999999999875
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-51 Score=401.69 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=196.6
Q ss_pred CccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeC----CCceEEEE
Q 007959 310 DDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKLLIY 382 (583)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 382 (583)
+..+.||+|+||+||+|... ++..||+|++... .....+.|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44577999999999999876 5889999999643 33445679999999999999999999999854 34579999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEeecCcccccCcCC
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~ 461 (583)
||+++|+|.+++++ ...+++..+..++.||+.||+|||++ .++|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp ECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred eCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 99999999999976 46799999999999999999999965 33499999999999998 4799999999999864332
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ........ .......
T Consensus 186 --~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-----~~~~~~i~-~~~~~~~------ 250 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRVT-SGVKPAS------ 250 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHHT-TTCCCGG------
T ss_pred --ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-----HHHHHHHH-cCCCCCC------
Confidence 2345689999999998865 6999999999999999999999999643211 11111111 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+...+.++.+++.+||+.||++|||++|+++
T Consensus 251 -~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 -FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11222356889999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.2e-52 Score=409.62 Aligned_cols=248 Identities=21% Similarity=0.338 Sum_probs=208.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||+||++... +|+.||+|.+.+. .....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 357899999999999999999865 6899999999753 223456799999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++++ .+.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~-~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999976 4579999999999999999999995 599999999999999999999999999999876443
Q ss_pred c-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 S-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ......... . .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~------~- 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL------IFAKIIKLE-Y------D- 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-C------C-
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC-C------C-
Confidence 3 33456789999999999999999999999999999999999999997643221 111111111 0 1
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVV 573 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl 573 (583)
.+...+.++.+|+.+||+.||++|||++|++
T Consensus 253 --~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 253 --FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1223346789999999999999999999863
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.9e-50 Score=415.39 Aligned_cols=249 Identities=22% Similarity=0.376 Sum_probs=209.0
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
+.|+..+.||+|+||.||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+||||+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46888899999999999999876 58999999997655555667899999999999999999999999999999999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceee
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 465 (583)
++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+..... ..
T Consensus 231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 99999999965 459999999999999999999995 5999999999999999999999999999987765432 23
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCH
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (583)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ ...... .. ..+... ...
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~-~~-----~~~~~~-~~~ 371 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIR-DN-----LPPRLK-NLH 371 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHH-HS-----CCCCCS-CTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHH-cC-----CCCCCc-ccc
Confidence 45689999999999999999999999999999999999999997543221 111111 11 111111 112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 546 ~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+.++.+|+.+||+.||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33467899999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.5e-51 Score=396.26 Aligned_cols=246 Identities=22% Similarity=0.379 Sum_probs=191.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|+..+.||+|+||+||+|... +|+.||+|++.+.. ....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999865 68999999997532 23356799999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+ +|+|.+++.+ .+.+++..+..++.||+.||+|||+ .+|+||||||+|||+++++++||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHH-SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 6899999976 4679999999999999999999995 499999999999999999999999999998765432
Q ss_pred ceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||+..... ........ .. .
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~~~~i~~-~~--~------ 229 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISN-GV--Y------ 229 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-TC--C------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHc-CC--C------
Confidence 2344679999999999998876 58999999999999999999999764322 11111111 10 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|||++|+++
T Consensus 230 -~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 -TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 112233467889999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.7e-51 Score=403.86 Aligned_cols=242 Identities=26% Similarity=0.372 Sum_probs=193.9
Q ss_pred cCCCccceeeecCceEEEEEEEc----CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|+..+.||+|+||+||+|+.. .++.||+|.+++.. ......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56889999999999999999763 46799999997532 2223468889999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.+++++ .+.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999999976 4579999999999999999999995 59999999999999999999999999999865443
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||......+ ........ ..
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~------~~~~i~~~-~~-------- 243 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE------TMTMILKA-KL-------- 243 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHC-CC--------
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH------HHHHHHcC-CC--------
Confidence 32 2344679999999999999999999999999999999999999997643221 11111111 10
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
..+...+.++.+++.+||+.||++|||+
T Consensus 244 -~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1122344678999999999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.6e-49 Score=394.60 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=189.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC-------
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT------- 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 376 (583)
.++|+..+.||+|+||+||+|... +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 346888899999999999999865 68999999997543 334567999999999999999999999986543
Q ss_pred -----ceEEEEEcCCCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEe
Q 007959 377 -----SKLLIYDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVS 449 (583)
Q Consensus 377 -----~~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 449 (583)
..++||||+++|+|.++++.+. ...++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999997642 236677889999999999999995 599999999999999999999999
Q ss_pred ecCcccccCcCCce-----------eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch
Q 007959 450 DFGLAKLLEDEESH-----------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (583)
Q Consensus 450 Dfgl~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 518 (583)
|||+|+........ .....+||+.|||||++.+..|+.++||||+||++|||++ ||......
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---- 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---- 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----
Confidence 99999877543321 1234579999999999999999999999999999999997 77542211
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....... .....+.........+.+++.+||+.||++|||+.|+++
T Consensus 234 -~~~~~~~---------~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 -VRTLTDV---------RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHH---------HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHH---------hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0001100 011111122334456788999999999999999999976
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.1e-46 Score=378.99 Aligned_cols=283 Identities=38% Similarity=0.643 Sum_probs=241.3
Q ss_pred CCHHHHHHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC
Q 007959 297 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (583)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 376 (583)
++..++...+++|+..+.||+|+||.||+|...++..||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33445555678999999999999999999998889999999988766666778999999999999999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCc
Q 007959 377 SKLLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGL 453 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 453 (583)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997542 359999999999999999999995 4999999999999999999999999999
Q ss_pred ccccCcCC-ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccc
Q 007959 454 AKLLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ 532 (583)
Q Consensus 454 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (583)
++...... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.............|..........
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654322 22233456899999999999889999999999999999999999999876655555666666555555555
Q ss_pred ccccCCCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 533 REIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 533 ~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
...+++.... .....+..+.+++.+||+.||++|||++|+++.|+.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 5666665543 5678888999999999999999999999999999988753
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.9e-46 Score=378.84 Aligned_cols=286 Identities=41% Similarity=0.801 Sum_probs=244.1
Q ss_pred CCCCHHHHHHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch-hhHHHHHHHHHHHHhCCCCceeeeeeeee
Q 007959 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCN 373 (583)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 373 (583)
..++..++....++|+..+.||+|+||.||++...+|+.||+|++..... .....+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 46788999999999999999999999999999988899999999976432 22346899999999999999999999999
Q ss_pred CCCceEEEEEcCCCCchhhHhhhcC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEee
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSD 450 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 450 (583)
+....++||||+++|+|.++++... ..+++..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998642 3499999999999999999999976556999999999999999999999999
Q ss_pred cCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhc--ccchHHHHHHHHhh
Q 007959 451 FGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--KGLNIVGWLNFLIS 528 (583)
Q Consensus 451 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~ 528 (583)
||++...............||+.|+|||.+.+..++.++||||||+++|||++|+.||+..... .......|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 9999987665555555667999999999999889999999999999999999999999754322 33445566665555
Q ss_pred ccccccccCCCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 529 EDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 529 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
........+..... .....+..+.+++.+||+.||++|||++||++.|++.-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 55556666655543 66788889999999999999999999999999998643
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=388.63 Aligned_cols=263 Identities=24% Similarity=0.332 Sum_probs=200.4
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeC------CCc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNS------PTS 377 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 377 (583)
++|+..+.||+|+||+||+|... +|+.||||++++.. ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 46888999999999999999875 69999999997532 2344678899999999999999999998753 467
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.|+||||++ |+|.+++.. .+.+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999995 789999976 5679999999999999999999995 59999999999999999999999999999876
Q ss_pred CcCC---ceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc--
Q 007959 458 EDEE---SHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR-- 531 (583)
Q Consensus 458 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 531 (583)
.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+...........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 4332 2223456899999999998775 569999999999999999999999976433222111110000000000
Q ss_pred ------cc---cccCCCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 532 ------QR---EIIDPNCE----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 532 ------~~---~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.. ..+.+..+ ...+....++.+|+.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 00000000 011123467889999999999999999999875
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.2e-46 Score=378.31 Aligned_cols=196 Identities=26% Similarity=0.364 Sum_probs=168.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc----CCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 380 (583)
.+.|+..+.||+|+||+||+|..+ .++.||+|++.+... ...+.+|++++..+ +||||+++++++.+.+..++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 467999999999999999999753 467899999876433 45678899999998 69999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC-CcEEEeecCcccccCc
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-LEARVSDFGLAKLLED 459 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~~~~ 459 (583)
||||+++|+|.++++ .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 98 vmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 98 AMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp EEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred EEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999999984 48999999999999999999995 599999999999999876 7999999999986543
Q ss_pred CCc---------------------------eeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCc
Q 007959 460 EES---------------------------HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDA 510 (583)
Q Consensus 460 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~ 510 (583)
... ......+||+.|+|||++.+. .|+.++||||+||++|||+||+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 211 112335799999999998775 589999999999999999999999854
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.2e-45 Score=397.01 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=211.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
+++|+..+.||+|+||.||++... +|+.||+|.+........+.+.+|+++|+.++|||||++++++.+....++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468899999999999999999875 5899999999876666677899999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC--CcEEEeecCcccccCcCCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN--LEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgl~~~~~~~~~ 462 (583)
+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 99999999997666789999999999999999999995 499999999999999854 899999999999876543
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ........ ..++. .
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~------~~~i~~~~---~~~~~---~ 378 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET------LRNVKSCD---WNMDD---S 378 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHTTC---CCCCS---G
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHhCC---CCCCc---c
Confidence 23456799999999999999999999999999999999999999976432211 11111100 00110 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+|+.+||+.||++|||+.|+++
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11223467889999999999999999999976
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.7e-45 Score=391.04 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=200.0
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHH---HHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFE---RELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.++|+..++||+|+||.||++... +|+.||+|++.+.. ......+. .++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467889999999999999999876 58999999997532 11122333 346667788999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
|+||||++||+|.+++.. .+.+++..+..++.||+.||+||| +.+||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~-~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999976 467999999999999999999999 5699999999999999999999999999998765
Q ss_pred cCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
... ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||........ ...........
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~------- 410 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA------- 410 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-------
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-------
Confidence 433 334689999999999964 5799999999999999999999999976433221 11111111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHH
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPT-----MHRVV 573 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt-----~~evl 573 (583)
. ..+...+.++.+|+.+||+.||++|++ ++||+
T Consensus 411 ~---~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 V---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp C---CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred C---CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 0 122234567899999999999999998 56664
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=359.36 Aligned_cols=257 Identities=27% Similarity=0.506 Sum_probs=213.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|...+.||+|+||+||++... ++..||+|++........+.+.+|++++++++||||+++++++.++...++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356778899999999999999876 5899999999877777778899999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++|+|.++++.....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 99999999998877789999999999999999999995 499999999999999999999999999998765433221
Q ss_pred -------------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc---chHHHHHHHHhh
Q 007959 465 -------------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG---LNIVGWLNFLIS 528 (583)
Q Consensus 465 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~ 528 (583)
.....||+.|+|||.+.+..++.++||||||+++|||++|..|+........ .........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 242 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR--- 242 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---
Confidence 1145799999999999999999999999999999999999999865332211 111111110
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
... ...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 243 ------~~~-------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 243 ------YCP-------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp ------TCC-------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------cCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 011 1223568899999999999999999999999987643
No 23
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-44 Score=352.93 Aligned_cols=257 Identities=27% Similarity=0.404 Sum_probs=215.0
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcCC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLP 386 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 386 (583)
++|+..+.||+|+||.||++...++..||+|++..... ..+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 56788899999999999999998899999999976433 34678999999999999999999999999999999999999
Q ss_pred CCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceeee
Q 007959 387 GGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 466 (583)
Q Consensus 387 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 466 (583)
+++|.++++.....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++............
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 999999998777779999999999999999999995 49999999999999999999999999999876544333333
Q ss_pred eeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCH
Q 007959 467 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (583)
Q Consensus 467 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (583)
...+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ........ .. . ..+.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~--~~----~---~~~~ 230 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTG--FR----L---YKPR 230 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTT--CC----C---CCCT
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcC--cc----C---CCCC
Confidence 4457788999999999999999999999999999999 999997543221 11111110 00 0 1112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 546 ~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
..+..+.+++.+||+.||++|||++|+++.|+++..+
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 2346789999999999999999999999999998764
No 24
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.8e-44 Score=350.91 Aligned_cols=258 Identities=24% Similarity=0.366 Sum_probs=215.3
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.++|+..+.||+|+||.||++...++..||+|++..... ..+.+.+|++++.+++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 457788899999999999999999888999999975433 3467899999999999999999999999999999999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceee
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 465 (583)
++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 9999999998776779999999999999999999995 4999999999999999999999999999987765544434
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCC
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+....... ........ ... .+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~---~~~------~~ 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGH---RLY------RP 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHTTC---CCC------CC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHHHHcCC---CCC------CC
Confidence 44556788999999998899999999999999999999 9999975432211 11111000 011 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
...+..+.+++.+||+.||++|||++|+++.|+++..+
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 12235788999999999999999999999999988654
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.6e-44 Score=360.68 Aligned_cols=258 Identities=27% Similarity=0.417 Sum_probs=210.5
Q ss_pred cCCCccceeeecCceEEEEEEEc----CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
++|+..+.||+|+||.||+|... .+..||||.+... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46777899999999999999885 4556999999764 344567799999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.++++.....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 99999999999998767789999999999999999999995 499999999999999999999999999998775443
Q ss_pred cee--eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 462 SHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 462 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... . ........
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~---~~~~~~~~-------- 271 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD---V---ISSVEEGY-------- 271 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---H---HHHHHTTC--------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH---H---HHHHHcCC--------
Confidence 222 223446788999999998999999999999999999999 999996543221 1 11111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+...+..+.+++.+||+.||++|||+.||++.|++++..
T Consensus 272 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 272 -RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0011223446789999999999999999999999999998753
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-42 Score=347.40 Aligned_cols=279 Identities=33% Similarity=0.590 Sum_probs=230.5
Q ss_pred CCCCHHHHHHHhcCCCcc------ceeeecCceEEEEEEEcCCcEEEEEeeccc----chhhHHHHHHHHHHHHhCCCCc
Q 007959 295 LPYSSKDIIKKLETLDDD------HIIGSGGFGTVYKLAMDDGNVFALKRIDKL----NEGFDRFFERELEILGSIKHRY 364 (583)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~n 364 (583)
..|+..++..++.+|... +.||+|+||.||+|.. ++..||+|++... .....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468899999999999877 8999999999999986 5889999998653 2334577999999999999999
Q ss_pred eeeeeeeeeCCCceEEEEEcCCCCchhhHhhhc--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC
Q 007959 365 LVNLRGYCNSPTSKLLIYDFLPGGSLDEALHER--SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (583)
Q Consensus 365 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 442 (583)
|+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999753 3469999999999999999999995 49999999999999999
Q ss_pred CCcEEEeecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHH
Q 007959 443 NLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG 521 (583)
Q Consensus 443 ~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~ 521 (583)
++.+||+|||++......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||+....... ...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence 999999999999876543322 2234568999999998765 588999999999999999999999976433221 111
Q ss_pred HHHHH-hhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 522 WLNFL-ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 522 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
+.... .........+++.........+..+.+++.+||+.||++|||+++|++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11111 112223344555566667788889999999999999999999999999999864
No 27
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.4e-43 Score=356.08 Aligned_cols=260 Identities=29% Similarity=0.451 Sum_probs=204.1
Q ss_pred HHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 304 KKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
....+|+..+.||+|+||+||++.. +|..||||++.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788899999999999999977 58899999987543 33446789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 382 YDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPR--IIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
|||+++|+|.++++... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999997643 2399999999999999999999954 6 999999999999999999999999999855
Q ss_pred CcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
.... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... . ........ .
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~---~---~~~~~~~~-~----- 256 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---V---VAAVGFKC-K----- 256 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH---H---HHHHHHSC-C-----
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHhcC-C-----
Confidence 4332 12334579999999999999999999999999999999999999997543221 1 11110010 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+...+.++.+++.+||+.||++|||++|+++.|++++..
T Consensus 257 --~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 257 --RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred --CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0112233446789999999999999999999999999988753
No 28
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.2e-44 Score=354.13 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=213.6
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.++|+..+.||+|+||.||++...++..||+|++..... ..+.+.+|++++.+++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457788899999999999999999999999999976433 3467899999999999999999999999999999999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceee
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT 465 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 465 (583)
++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 9999999998766779999999999999999999995 4999999999999999999999999999987654433323
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCC
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
....+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||........ ..... .. .... .+
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~------~~~~~-~~-~~~~-------~~ 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET------AEHIA-QG-LRLY-------RP 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHH-TT-CCCC-------CC
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH------HHHHh-cc-cCCC-------CC
Confidence 33456788999999999999999999999999999998 9999975432211 11111 10 0000 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
...+..+.+++.+||+.||++|||++|+++.|++++.+|
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 222367889999999999999999999999999999876
No 29
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.8e-43 Score=364.16 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=211.0
Q ss_pred hcCCCccceeeecCceEEEEEEEc--------CCcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 375 (583)
.++|+..+.||+|+||.||+|... ++..||+|.++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888899999999999999763 35679999997543 33456799999999999 899999999999999
Q ss_pred CceEEEEEcCCCCchhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999997643 358999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 441 DGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||+| |+.||.......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 99999999999999866543321 1223457889999999999999999999999999999999 999987543221
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
... ... ... ....+...+.++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 314 ~~~---~~~-~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 314 LFK---LLK-EGH--------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHH---HHH-TTC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH---HHh-cCC--------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 111 110 011222344678999999999999999999999999998864
No 30
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-42 Score=347.55 Aligned_cols=250 Identities=22% Similarity=0.364 Sum_probs=208.4
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|+..+.||+|+||+||++.. .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 45788999999999999999985 56899999999766555567899999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999999753 59999999999999999999995 4999999999999999999999999999987654433 2
Q ss_pred eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCC
Q 007959 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ .......... . ...+
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~~-~------~~~~ 239 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTP-E------LQNP 239 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCSC-C------CSCG
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCC-C------CCCc
Confidence 3345799999999999999999999999999999999999999975432211 1111111100 0 0112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 334567899999999999999999999975
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.2e-44 Score=368.37 Aligned_cols=259 Identities=26% Similarity=0.409 Sum_probs=212.1
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|...+.||+|+||.||+|... +++.||||.+.... ....+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457788899999999999999987 68999999987542 2334568899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
|+++|+|.++++.....+++..+..++.||+.||+|||+ .+++||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 999999999998776779999999999999999999995 49999999999999999999999999999865433211
Q ss_pred ee-eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 464 IT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 464 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.. ....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... .. ........ .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~---~~~~~~~~--~------- 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TR---EFVEKGGR--L------- 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HH---HHHHTTCC--C-------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHHcCCC--C-------
Confidence 11 12235778999999998899999999999999999998 999987543221 11 11111110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
..+...+.++.+++.+||+.||++|||++++++.|+++..+
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11222346788999999999999999999999999988654
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5e-44 Score=357.06 Aligned_cols=264 Identities=28% Similarity=0.454 Sum_probs=209.0
Q ss_pred cCCCccceeeecCceEEEEEEE-----cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeC--CCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS--PTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 379 (583)
++|+..+.||+|+||+||++.+ .+++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5678889999999999999984 3688999999987766667789999999999999999999999854 45589
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 9999999999999998776679999999999999999999995 5999999999999999999999999999987654
Q ss_pred CCce--eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcc---------cchHHHHHHHHhh
Q 007959 460 EESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK---------GLNIVGWLNFLIS 528 (583)
Q Consensus 460 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~---------~~~~~~~~~~~~~ 528 (583)
.... ......++..|+|||.+.+..++.++||||||+++|||+||..|+....... .............
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 3321 1233457788999999999999999999999999999999999987532210 0000000011111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.. .....+...+.++.+++.+||+.||++|||++|+++.|+++..
T Consensus 247 ~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 247 NN--------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TT--------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc--------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 10 0111223345779999999999999999999999999998865
No 33
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-43 Score=365.48 Aligned_cols=257 Identities=27% Similarity=0.460 Sum_probs=200.7
Q ss_pred cCCCccceeeecCceEEEEEEEc----CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.+|+..+.||+|+||.||+|... ++..||||+++.. .....+.|.+|++++++++||||+++++++.+....++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999875 5778999999754 334456799999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.++++.....+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 99999999999998777789999999999999999999995 499999999999999999999999999998765433
Q ss_pred ceee--eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 462 SHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 462 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... ....++..|+|||++.+..++.++||||||+++|||++ |+.||....... . ......... .+
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~---~---~~~i~~~~~-----~~ 270 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD---V---IKAVDEGYR-----LP 270 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH---H---HHHHHTTEE-----CC
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHHHHcCCC-----CC
Confidence 2211 22345778999999999999999999999999999998 999986532211 1 111111100 00
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.+...+.++.+++.+||+.||++||++.+|++.|++++.
T Consensus 271 ----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 ----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 112334678999999999999999999999999998865
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2e-43 Score=357.17 Aligned_cols=267 Identities=28% Similarity=0.363 Sum_probs=208.5
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc----eEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS----KLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~~lv 381 (583)
.++|+..+.||+|+||+||+|... ++.||||++..... ....+..|+.++++++||||+++++++..... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467888999999999999999876 78999999975433 34556779999999999999999999977543 6999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CCCeeecCCCCCCeEecCCCcEEEeecCcc
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-------SPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 454 (583)
|||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ +++|+||||||+|||++.++.+||+|||++
T Consensus 101 ~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999975 45999999999999999999999320 129999999999999999999999999999
Q ss_pred cccCcCCce-eeeeecccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch----------
Q 007959 455 KLLEDEESH-ITTIVAGTFGYLAPEYMQS-----GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN---------- 518 (583)
Q Consensus 455 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~---------- 518 (583)
+........ ......||+.|+|||++.+ ..++.++||||||+++|||+||+.||..........
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 876543322 2233579999999999876 356778999999999999999999997543221111
Q ss_pred HHHHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
...+...... . ...+.... .....+.++.+++.+||+.||++|||++||++.|+++..
T Consensus 259 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVH-K----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTT-S----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhc-c----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 1 11111111 123456779999999999999999999999999998764
No 35
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.5e-44 Score=352.82 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=200.7
Q ss_pred hcCCCccceeeecCceEEEEEEEcC----CcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
.++|+..+.||+|+||.||+|.... +..||+|.+... .....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578888999999999999998753 457999988753 3344567999999999999999999999985 456889
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.++++.....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 999999999999998766679999999999999999999995 49999999999999999999999999999877654
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .... .....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~---i~~~~--------- 234 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGR---IENGE--------- 234 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH---HHTTC---------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHH---HHcCC---------
Confidence 4333344557889999999999999999999999999999997 999997543221 1111 11110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
....+...+..+.+++.+|++.||++|||+.|+++.|++++.+|
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01122334467899999999999999999999999999988753
No 36
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-43 Score=351.34 Aligned_cols=261 Identities=27% Similarity=0.377 Sum_probs=207.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
++|+..+.||+|+||.||++... ++..||+|.+... .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 46788899999999999999865 5889999998542 2334567899999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999999764 569999999999999999999995 4999999999999999999999999999987765444
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
.......||+.|+|||.+.+..++.++||||+|+++|||+||+.||+...... ......... .... ...
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~-~~~~----~~~ 235 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQDS-VPNV----TTD 235 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSSC-CCCH----HHH
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhcc-CCCc----chh
Confidence 44445679999999999999999999999999999999999999997643211 011111110 0000 001
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhhc
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRP-TMHRVVQILESEIYE 582 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RP-t~~evl~~L~~~~~~ 582 (583)
.....+..+.+++.+|++.||++|| +++++.+.|++.+.+
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 1223446789999999999999999 899999999987754
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.1e-42 Score=348.25 Aligned_cols=261 Identities=23% Similarity=0.344 Sum_probs=214.7
Q ss_pred CCCCHHHHHHHhcC----------CCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC
Q 007959 295 LPYSSKDIIKKLET----------LDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHR 363 (583)
Q Consensus 295 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 363 (583)
.+++.+++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46788888888764 556678999999999999887 6999999999766555667799999999999999
Q ss_pred ceeeeeeeeeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC
Q 007959 364 YLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN 443 (583)
Q Consensus 364 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 443 (583)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999999864 469999999999999999999995 499999999999999999
Q ss_pred CcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHH
Q 007959 444 LEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL 523 (583)
Q Consensus 444 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~ 523 (583)
+.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------~~ 250 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AM 250 (321)
T ss_dssp CCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HH
T ss_pred CcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HH
Confidence 99999999999876543322 234579999999999999999999999999999999999999997532211 11
Q ss_pred HHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 524 NFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...... ..+... .....+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~------~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 KRLRDS------PPPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHS------SCCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhcC------CCCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 111111 11233467889999999999999999999986
No 38
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=359.14 Aligned_cols=249 Identities=22% Similarity=0.367 Sum_probs=197.1
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccch-hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||+||+|.. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 56788899999999999999986 4689999999865432 234568899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||++.........
T Consensus 89 ~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 89 YCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp CCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 9999999999976 4569999999999999999999995 49999999999999999999999999999876554443
Q ss_pred eeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||+...... ......... . .
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~---------~ 228 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA------LYKKIMRGK-Y---------D 228 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-C---------C
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCC-C---------C
Confidence 4455679999999999988775 899999999999999999999997643221 111111110 0 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+...+.++.+++.+||+.||++|||++|+++
T Consensus 229 ~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 VPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11223466889999999999999999999985
No 39
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-43 Score=363.59 Aligned_cols=271 Identities=26% Similarity=0.400 Sum_probs=217.3
Q ss_pred CCCCHHHHHHHhcCCCccceeeecCceEEEEEEE------cCCcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCcee
Q 007959 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLV 366 (583)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 366 (583)
.++...+.....++|+..+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++.++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 3566666666778999999999999999999974 246789999997643 33456799999999999 789999
Q ss_pred eeeeeeeCCCc-eEEEEEcCCCCchhhHhhhcCC----------------------------------------------
Q 007959 367 NLRGYCNSPTS-KLLIYDFLPGGSLDEALHERSE---------------------------------------------- 399 (583)
Q Consensus 367 ~l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------- 399 (583)
++++++.+.+. .++||||+++|+|.++++....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 99999977554 8999999999999999976432
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 400 -------------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 400 -------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
.+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 18999999999999999999995 49999999999999999999999999999876443
Q ss_pred Cc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 461 ES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.. .......||+.|+|||++.+..++.++||||||+++|||+| |+.||....... ... ........
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~----~~~~~~~~------ 314 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTR------ 314 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHH----HHHHHTCC------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHH----HHHHcCCC------
Confidence 32 23344568999999999999999999999999999999998 999997543221 111 11111100
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
...+...+.++.+++.+||+.||++|||++|+++.|++++..
T Consensus 315 --~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 315 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 011222346789999999999999999999999999998754
No 40
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.7e-43 Score=354.71 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=205.7
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
..+|+..+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56788999999999999999987 57899999999754 3334567889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++|+|.+++... +.+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999764 569999999999999999999995 4999999999999999999999999999986654322
Q ss_pred eeeeeeccccccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRAT-EKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....||+.|+|||++.+..+. .++||||+|+++|||++|+.||+...... ......... .
T Consensus 170 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~-~--------- 231 (328)
T 3fe3_A 170 --LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE------LRERVLRGK-Y--------- 231 (328)
T ss_dssp --GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-C---------
T ss_pred --cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-C---------
Confidence 2345799999999999888764 89999999999999999999997643221 111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011223467889999999999999999999975
No 41
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-42 Score=347.82 Aligned_cols=260 Identities=25% Similarity=0.426 Sum_probs=204.9
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|...+.||+|+||.||+|...+ .+|+|.++.. .....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 3578888999999999999997653 5888887643 3344567999999999999999999999875 455889999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC-c
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-S 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-~ 462 (583)
|+++++|.++++.....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++....... .
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 999999999998777889999999999999999999995 499999999999999999999999999998654322 2
Q ss_pred eeeeeeccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||........ ... .... ....+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~~~----~~~~----~~~~~~ 258 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--IIF----MVGR----GYASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHH----HHHH----TCCCCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH--HHH----HHhc----CCCCcc
Confidence 2233457999999999986 56789999999999999999999999975332211 111 1111 111222
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
........+..+.+++.+||+.+|++|||+.|+++.|+.+..
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 222333445779999999999999999999999999987754
No 42
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.1e-43 Score=343.79 Aligned_cols=257 Identities=27% Similarity=0.391 Sum_probs=213.8
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcCC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLP 386 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 386 (583)
++|+..+.||+|+||.||++...++..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56778899999999999999998899999999976433 34678999999999999999999999999999999999999
Q ss_pred CCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceeee
Q 007959 387 GGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 466 (583)
Q Consensus 387 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 466 (583)
+++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++............
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 999999998766779999999999999999999995 49999999999999999999999999999876543222223
Q ss_pred eeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCH
Q 007959 467 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS 545 (583)
Q Consensus 467 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (583)
...++..|+|||.+.+..++.++||||+|+++|||++ |+.||....... ......... .. ..+.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~--~~-------~~~~ 228 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGF--RL-------YKPR 228 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTC--CC-------CCCT
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCC--cC-------CCCc
Confidence 3457788999999998999999999999999999999 899987532211 111111110 00 0112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 546 ESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 546 ~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
..+..+.+++.+|++.||++|||++++++.|+++..+
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2346788999999999999999999999999998754
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-43 Score=355.49 Aligned_cols=260 Identities=24% Similarity=0.419 Sum_probs=212.4
Q ss_pred HhcCCCccceeeecCceEEEEEEEcC------CcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
..++|+..+.||+|+||.||++...+ +..||+|.+... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 35688899999999999999998753 478999999754 33445779999999999999999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 007959 378 KLLIYDFLPGGSLDEALHERS-----------------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIK 434 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 434 (583)
.++||||+++|+|.+++.... ..+++..++.++.||++||.|||+ .+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence 999999999999999997642 569999999999999999999995 499999999
Q ss_pred CCCeEecCCCcEEEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcch
Q 007959 435 SSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASF 512 (583)
Q Consensus 435 ~~Nill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~ 512 (583)
|+||+++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986644322 22234568899999999999999999999999999999999 999987532
Q ss_pred hcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... ...... ... ....+...+..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus 282 ~~~------~~~~~~-~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 282 HEE------VIYYVR-DGN--------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHH------HHHHHH-TTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred hHH------HHHHHh-CCC--------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 211 111111 111 1112223446789999999999999999999999999988653
No 44
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.3e-43 Score=351.42 Aligned_cols=263 Identities=24% Similarity=0.435 Sum_probs=209.3
Q ss_pred cCCCccceeeecCceEEEEEEE-----cCCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC--Cce
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSP--TSK 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 378 (583)
+.|+..+.||+|+||.||++.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477889999999999999984 468899999997533 23456789999999999999999999999776 668
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999998777789999999999999999999995 499999999999999999999999999998776
Q ss_pred cCCce--eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhc--------cc-chHHHHHHHHh
Q 007959 459 DEESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--------KG-LNIVGWLNFLI 527 (583)
Q Consensus 459 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~--------~~-~~~~~~~~~~~ 527 (583)
..... ......||..|+|||.+.+..++.++||||+|+++|||+||+.|+...... .+ ..........
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL- 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH-
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH-
Confidence 54432 223456888899999999999999999999999999999999986532211 00 0011111111
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
... .....+...+..+.+++.+||+.||++|||++|+++.|+++++
T Consensus 257 ~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 257 KEG--------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HTT--------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred hcc--------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 010 0111223345779999999999999999999999999998864
No 45
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.2e-43 Score=371.51 Aligned_cols=257 Identities=25% Similarity=0.442 Sum_probs=211.4
Q ss_pred HhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
..++|+..+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 356778889999999999999999989999999998643 34678999999999999999999999986 5678999999
Q ss_pred CCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++|+|.++++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999999754 3468999999999999999999995 49999999999999999999999999999876543222
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
......+|..|+|||.+....++.++||||||+++|||+| |+.||......+ .. ........ .+
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~---~~---~~i~~~~~-----~~---- 405 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VI---RALERGYR-----MP---- 405 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HH---HHHHHTCC-----CC----
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHHcCCC-----CC----
Confidence 2233446789999999999999999999999999999999 999997532211 11 11111110 01
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.+...+.++.+++.+||+.||++|||+++|++.|+++..
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 122344678999999999999999999999999998754
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=8.5e-42 Score=341.26 Aligned_cols=262 Identities=16% Similarity=0.188 Sum_probs=211.9
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+|++++..+ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4688889999999999999986 568999999886533 234578899999999 799999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc-----EEEeecCcccccCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-----ARVSDFGLAKLLED 459 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgl~~~~~~ 459 (583)
+ +++|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 9 99999999876677999999999999999999999 559999999999999987766 99999999987654
Q ss_pred CCce------eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc
Q 007959 460 EESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (583)
Q Consensus 460 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (583)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........................
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR 243 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH
Confidence 4321 1234579999999999999999999999999999999999999997643222111111111111111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.. ....+.++.+++.+||+.||++|||+++|++.|++++.+
T Consensus 244 ~~--------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 244 EL--------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HH--------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HH--------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 11 112346789999999999999999999999999998754
No 47
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.6e-42 Score=350.43 Aligned_cols=261 Identities=15% Similarity=0.176 Sum_probs=210.2
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|+..+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 4678889999999999999986 5689999998865432 34588999999999 999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc-----EEEeecCcccccCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-----ARVSDFGLAKLLED 459 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgl~~~~~~ 459 (583)
+ +++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++.+..
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 999999998766789999999999999999999995 49999999999999998887 99999999987654
Q ss_pred CCcee------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc
Q 007959 460 EESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (583)
Q Consensus 460 ~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (583)
..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||........................
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~- 241 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI- 241 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH-
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH-
Confidence 33221 23467999999999999999999999999999999999999999764322211111111110000000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... ....+ ++.+++.+|++.||.+||++++|.+.|++++.+
T Consensus 242 ~~~-------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 242 EVL-------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHH-------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHH-------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 000 01123 799999999999999999999999999987754
No 48
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.7e-43 Score=354.28 Aligned_cols=265 Identities=26% Similarity=0.403 Sum_probs=212.7
Q ss_pred cCCCccceeeecCceEEEEEEE-----cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeee--CCCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN--SPTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 379 (583)
++|+..+.||+|+||.||++.. .++..||+|++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5778889999999999999984 468899999998776666778999999999999999999999886 456688
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++++|.+++......+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 9999999999999998766679999999999999999999995 5999999999999999999999999999987754
Q ss_pred CCcee--eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcc--------cchHHHHHHHHhhc
Q 007959 460 EESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK--------GLNIVGWLNFLISE 529 (583)
Q Consensus 460 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~~~~ 529 (583)
..... .....||..|+|||.+.+..++.++||||||+++|+|++|+.||....... ..............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 43322 233468888999999999899999999999999999999999986533210 00000000000000
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
. .....+...+..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 260 ~--------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 260 G--------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp T--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred c--------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0 11112234457789999999999999999999999999987643
No 49
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=342.27 Aligned_cols=271 Identities=23% Similarity=0.302 Sum_probs=212.2
Q ss_pred cCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC--ceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 382 (583)
+.|...+.||+|+||+||+|.... ++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 467788999999999999998775 8999999997543 233567889999999999999999999987655 679999
Q ss_pred EcCCCCchhhHhhhcCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe----cCCCcEEEeecCcccc
Q 007959 383 DFLPGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSDFGLAKL 456 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~~~ 456 (583)
||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999986533 39999999999999999999995 499999999999999 7788899999999987
Q ss_pred cCcCCceeeeeeccccccccccccc--------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc-chHHHHHHHHh
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQ--------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG-LNIVGWLNFLI 527 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~ 527 (583)
...... .....||..|+|||++. +..++.++||||||+++|||++|+.||........ ...........
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 655432 23356899999999886 56889999999999999999999999965332211 11111111110
Q ss_pred hccccccc---------cC---CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 528 SEDRQREI---------ID---PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 528 ~~~~~~~~---------~~---~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
........ .. +............+.+++.+||+.||++|||++|+++...+..++
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 00000000 00 111135567788899999999999999999999999999887654
No 50
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-42 Score=350.76 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=203.1
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCc----EEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGN----VFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|+..+.||+|+||+||+|... +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56788899999999999999864 344 46888876432 344577999999999999999999999998754 789
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|+||+++|+|.+++......+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 999999999999998877789999999999999999999995 49999999999999999999999999999876544
Q ss_pred Ccee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 461 ESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... .....+|..|+|||.+.+..++.++||||||+++|||+| |+.||+...... ...... ...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~----~~~------- 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE----KGE------- 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTC-------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHHH----cCC-------
Confidence 3322 233457889999999999999999999999999999999 999997643321 111111 110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
....+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 001122344678999999999999999999999999988754
No 51
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=8.8e-43 Score=372.62 Aligned_cols=258 Identities=24% Similarity=0.400 Sum_probs=213.8
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|+..+.||+|+||.||+|.+.. +..||||.+..... ..+.|.+|+++|++++||||++++++|.+....++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567788999999999999999875 78999999976433 356799999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++|+|.++++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999864 4569999999999999999999995 49999999999999999999999999999876544333
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+. .. .+. .
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~~----~~-~~~-------~ 439 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLE----KD-YRM-------E 439 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHH----TT-CCC-------C
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH----cC-CCC-------C
Confidence 3333456789999999999999999999999999999999 999987543221 111111 11 000 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.+...+..+.+++.+||+.||++|||+.+|++.|++++.+
T Consensus 440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 1223446789999999999999999999999999987654
No 52
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.1e-42 Score=363.38 Aligned_cols=252 Identities=26% Similarity=0.387 Sum_probs=207.0
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC-ceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT-SKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 384 (583)
.++|+..+.||+|+||.||+|... |+.||||.++... ..+.|.+|++++++++||||+++++++.+.. ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 457788899999999999999886 7899999997643 4567999999999999999999999987655 78999999
Q ss_pred CCCCchhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++|+|.++++.... .+++..++.++.||+.||+|||+ .+++||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999987644 37999999999999999999995 499999999999999999999999999998543221
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+ ... ...... + ..
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~---~i~~~~--~-------~~ 406 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP---RVEKGY--K-------MD 406 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH---HHHTTC--C-------CC
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHcCC--C-------CC
Confidence 22357889999999999999999999999999999998 999997543221 111 111110 0 01
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.+...+.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1223457789999999999999999999999999987654
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.4e-42 Score=346.40 Aligned_cols=261 Identities=22% Similarity=0.360 Sum_probs=204.0
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||+||++...+|+.||+|++.... ......+.+|++++++++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788899999999999999999899999999987532 2234678899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
|++ |+|.+.+......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 997 58999888767779999999999999999999995 4999999999999999999999999999987653322
Q ss_pred eeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccc----------
Q 007959 464 ITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ---------- 532 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 532 (583)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||........ +..... .......
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~-~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ--LPKIFS-ILGTPNPREWPQVQELP 251 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH--HHHHHH-HHCCCCTTTSGGGTTSH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHH-HHCCCChHHhhhhhccc
Confidence 2233568999999999876 5689999999999999999999999976433221 111111 1100000
Q ss_pred ------ccccCCC-CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 533 ------REIIDPN-CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 533 ------~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+... +....+....++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 00011223467889999999999999999999986
No 54
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.7e-42 Score=343.46 Aligned_cols=261 Identities=27% Similarity=0.474 Sum_probs=199.0
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
-.+|+..+.||+|+||.||++...+ .||+|.+... .....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3578889999999999999997653 5999988643 334456799999999999999999999976 4556899999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC-c
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-S 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-~ 462 (583)
|+++++|.++++.....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....... .
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 999999999998777789999999999999999999995 499999999999999999999999999998655322 2
Q ss_pred eeeeeeccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.......||+.|+|||.+. +..++.++||||+|+++|||++|+.||....... .... ..... ...+.
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~----~~~~~----~~~~~ 246 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIE----MVGRG----SLSPD 246 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HHHH----HHHHT----SCCCC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HHHH----Hhccc----ccCcc
Confidence 2223456999999999986 5678999999999999999999999997532211 1111 11111 11222
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
........+.++.+++.+||+.||++|||++|+++.|+++..|
T Consensus 247 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 2223334557899999999999999999999999999998764
No 55
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-42 Score=367.68 Aligned_cols=256 Identities=27% Similarity=0.428 Sum_probs=205.3
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.++|+..+.||+|+||.||+|...++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 456778899999999999999999888999999976432 35679999999999999999999999876 6789999999
Q ss_pred CCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 386 PGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 386 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
++|+|.++++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999764 4569999999999999999999995 499999999999999999999999999998765443333
Q ss_pred eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCC
Q 007959 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (583)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||......+ .......... ...
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~---------~~~ 402 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYR---------MPC 402 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCC---------CCC
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC---------CCC
Confidence 334457889999999999999999999999999999999 999987532211 1111111100 011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
+...+..+.+++.+||+.||++|||++++++.|+++..
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 22344678999999999999999999999999998764
No 56
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.5e-42 Score=346.76 Aligned_cols=259 Identities=25% Similarity=0.392 Sum_probs=212.7
Q ss_pred hcCCCccceeeecCceEEEEEEE------cCCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.++|...+.||+|+||.||++.. .++..||+|.+... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45778889999999999999976 24578999999754 334456789999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 007959 379 LLIYDFLPGGSLDEALHERS-----------------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKS 435 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 435 (583)
++||||+++|+|.+++.... ..+++..+..++.||++||+|||+ .+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence 99999999999999997642 238999999999999999999995 4999999999
Q ss_pred CCeEecCCCcEEEeecCcccccCcCCcee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchh
Q 007959 436 SNILLDGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFI 513 (583)
Q Consensus 436 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~ 513 (583)
+||+++.++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998765443322 233457889999999998899999999999999999999 9999976433
Q ss_pred cccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 514 EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.. ..... .... ....+...+..+.+++.+||+.||++|||+.|+++.|++++.+
T Consensus 259 ~~---~~~~~----~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ER---LFNLL----KTGH--------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG---HHHHH----HTTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH---HHHHh----hcCC--------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 11111 1110 0111223446789999999999999999999999999998865
No 57
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-42 Score=353.61 Aligned_cols=261 Identities=24% Similarity=0.417 Sum_probs=209.7
Q ss_pred HhcCCCccceeeecCceEEEEEEE------cCCcEEEEEeeccc-chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCC
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPT 376 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 376 (583)
..++|+..+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456788899999999999999986 24568999999753 233456799999999999 8999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 007959 377 SKLLIYDFLPGGSLDEALHERSE----------------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIK 434 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 434 (583)
..++||||+++|+|.+++..... .+++..++.++.||+.||+|||+ .+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 99999999999999999976532 37999999999999999999995 499999999
Q ss_pred CCCeEecCCCcEEEeecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcch
Q 007959 435 SSNILLDGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASF 512 (583)
Q Consensus 435 ~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~ 512 (583)
|+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876544332 2334567889999999999999999999999999999998 999997643
Q ss_pred hcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... .... ..... ... ..+...+.++.+++.+||+.||++|||+.|+++.|+.++.+
T Consensus 280 ~~~--~~~~----~~~~~-----~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VDA--NFYK----LIQNG-----FKM---DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CSH--HHHH----HHHTT-----CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cHH--HHHH----HHhcC-----CCC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 221 1111 11111 000 11222346789999999999999999999999999987653
No 58
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=356.38 Aligned_cols=258 Identities=27% Similarity=0.411 Sum_probs=211.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc--------CCcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 375 (583)
.++|...+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457788899999999999999863 24579999997543 33456789999999999 999999999999999
Q ss_pred CceEEEEEcCCCCchhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence 99999999999999999998643 359999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 441 DGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999987654332 22233457889999999999999999999999999999999 99998754322
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
........... ...+...+.++.+++.+||+.||++|||++||++.|++++.
T Consensus 301 --~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 301 --ELFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp --HHHHHHHTTCC---------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111111110 01112234678999999999999999999999999998875
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.9e-42 Score=348.26 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=205.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +|+.||+|.+.+. .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467888999999999999999876 5899999999753 223346788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999999976 4579999999999999999999995 499999999999999999999999999998644322
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ......... .
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~--------- 222 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LFELILMEE-I--------- 222 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-C---------
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH------HHHHHHcCC-C---------
Confidence 2 2344679999999999999999999999999999999999999997543221 111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|| +++|+++
T Consensus 223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 01223346789999999999999999 8888865
No 60
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=357.40 Aligned_cols=258 Identities=26% Similarity=0.383 Sum_probs=208.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc------CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.++|+..+.||+|+||.||+|... ++..||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356788899999999999999853 4678999999653 344456788999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC---cEEEe
Q 007959 379 LLIYDFLPGGSLDEALHERS------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARVS 449 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 449 (583)
++||||+++|+|.++++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998643 459999999999999999999995 4999999999999999554 59999
Q ss_pred ecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHh
Q 007959 450 DFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLI 527 (583)
Q Consensus 450 Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 527 (583)
|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||....... ......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------~~~~i~ 300 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------VLEFVT 300 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHH
Confidence 9999986533221 22233567899999999999999999999999999999998 999997643221 111111
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.... ...+...+..+.+++.+||+.||++|||+++|++.|+....
T Consensus 301 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 301 SGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 1110 11122334678899999999999999999999999987654
No 61
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-42 Score=345.67 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=206.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|+..+.||+|+||.||++... ++..||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357888899999999999999876 57899999887543 3456788999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC--CCcEEEeecCcccccCcCCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--NLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~~ 462 (583)
+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||++........
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 99999999998766679999999999999999999995 49999999999999986 78999999999987754432
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
.....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .......... .++. .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~---~~~~---~ 225 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEY---TFDE---E 225 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCC---CCCH---H
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHHcCCC---CCCh---h
Confidence 344579999999999998889999999999999999999999997643221 1111111100 0000 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00123467899999999999999999999986
No 62
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.6e-42 Score=347.47 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=195.0
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCc----EEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce-
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGN----VFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK- 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 378 (583)
.++|+..+.||+|+||.||+|...... .||+|.+... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 457888999999999999999866432 7999998753 334457799999999999999999999999877665
Q ss_pred -----EEEEEcCCCCchhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEE
Q 007959 379 -----LLIYDFLPGGSLDEALHERS-----EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (583)
Q Consensus 379 -----~lv~e~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 448 (583)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEE
Confidence 89999999999999996532 259999999999999999999995 49999999999999999999999
Q ss_pred eecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007959 449 SDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (583)
Q Consensus 449 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (583)
+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... . ....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~---~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---I---YNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---H---HHHH
Confidence 999999876543322 2233457889999999999999999999999999999999 999987643221 1 1111
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.... ....+...+.++.+++.+||+.||++|||+.++++.|++++.
T Consensus 253 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 253 IGGN---------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCC---------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111 111222344678999999999999999999999999999875
No 63
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-41 Score=341.05 Aligned_cols=262 Identities=26% Similarity=0.402 Sum_probs=202.4
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHh--CCCCceeeeeeeeeC----CCceE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNS----PTSKL 379 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 379 (583)
.++|+..+.||+|+||+||+|.. +++.||||++.... ...+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 35788899999999999999987 68999999987532 3445666676666 799999999998644 34578
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCeEecCCCcEEEeecCcc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 454 (583)
+||||+++|+|.++++. ..+++..+..++.|++.||+|||... +.+|+||||||+|||++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999999964 46999999999999999999999311 359999999999999999999999999999
Q ss_pred cccCcCCcee---eeeeccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCcchhcc
Q 007959 455 KLLEDEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSG----------KRPTDASFIEK 515 (583)
Q Consensus 455 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg----------~~p~~~~~~~~ 515 (583)
+......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8765443332 2234799999999999876 456799999999999999999 77775432221
Q ss_pred cchHHHHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 007959 516 GLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (583)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~ 579 (583)
. .......... ... ..+..+. .....+.++.+++.+||+.||++|||++||++.|+++
T Consensus 241 ~-~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFEDMRKVVC-VDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHHHHHHHT-TSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhhhhHHHh-ccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 1111111111 111 1111111 2345678899999999999999999999999999875
No 64
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4e-42 Score=346.19 Aligned_cols=260 Identities=27% Similarity=0.444 Sum_probs=213.1
Q ss_pred hcCCCccceeeecCceEEEEEEE------cCCcEEEEEeecccch-hhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKLNE-GFDRFFERELEILGSI-KHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 377 (583)
.++|+..+.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|++++.++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45788889999999999999975 3467899999975433 3457799999999999 99999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 378 KLLIYDFLPGGSLDEALHERSE-----------------QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 9999999999999999986532 48999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecCcccccCcCCcee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 441 DGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--K 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--H
Confidence 999999999999998776543322 233457889999999999999999999999999999999 999987543221 1
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... ..... .... .+...+..+.+++.+|++.||++|||+.|+++.|++++.+
T Consensus 257 ~~~----~~~~~-~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FYK----MIKEG-FRML-------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHH----HHHHT-CCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----HhccC-CCCC-------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111 11111 1111 1122346789999999999999999999999999998865
No 65
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.9e-42 Score=340.85 Aligned_cols=257 Identities=27% Similarity=0.378 Sum_probs=206.2
Q ss_pred hcCCCccceeeecCceEEEEEEEcC----CcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
.++|...+.||+|+||.||+|...+ +..||+|.+... .....+.+.+|++++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4678888999999999999998653 236999998764 334467799999999999999999999998654 5689
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 999999999999998777779999999999999999999995 49999999999999999999999999999876654
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ...... ....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~~---~~~~-------- 232 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVLE---KGDR-------- 232 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHHH---HTCC--------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHHh---cCCC--------
Confidence 4333344567889999999998999999999999999999998 999986532221 111111 0100
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
...+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 233 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 233 -LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 00112234678999999999999999999999999998764
No 66
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4e-42 Score=360.01 Aligned_cols=260 Identities=22% Similarity=0.355 Sum_probs=210.1
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccch---hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 376 (583)
++....++|+..+.||+|+||+||++...+ ++.||+|++.+... .....+.+|+.++..++||||+++++++.+.+
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 344446789999999999999999998875 78899999975322 22334889999999999999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..++||||+++|+|.++++.....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 9999999999999999998766789999999999999999999995 5999999999999999999999999999987
Q ss_pred cCcCCceeeeeeccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR 531 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 531 (583)
............+||+.|+|||++. ...++.++|||||||++|||++|+.||......+. ........
T Consensus 225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------~~~i~~~~- 297 (437)
T 4aw2_A 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHK- 297 (437)
T ss_dssp CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTHH-
T ss_pred cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH------HHhhhhcc-
Confidence 7665554445568999999999987 45789999999999999999999999976432211 11111100
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 007959 532 QREIIDPNCEGVQSESLDALLAVATQCVSSSPDD--RPTMHRVVQ 574 (583)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~--RPt~~evl~ 574 (583)
....+... ....+.++.+++.+|+..+|++ ||+++|+++
T Consensus 298 ~~~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 ERFQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHCCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00111111 1123467889999999888888 999999875
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-42 Score=342.44 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=210.5
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.++|+..+.||+|+||.||+|...++..||+|.+..... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 467888899999999999999998888999999875432 35678999999999999999999999864 4689999999
Q ss_pred CCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 386 PGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 386 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
++++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999997542 369999999999999999999995 499999999999999999999999999998776544333
Q ss_pred eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCC
Q 007959 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (583)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .. ...... ... ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~---~~~~~~--~~~-------~~ 231 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---VI---QNLERG--YRM-------VR 231 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH---HHHHTT--CCC-------CC
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---HH---HHHhcc--cCC-------CC
Confidence 334457889999999998899999999999999999999 999987532211 11 111110 000 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
+...+.++.+++.+|++.||++|||++++++.|++++.
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 22334678999999999999999999999999998764
No 68
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.1e-42 Score=340.62 Aligned_cols=259 Identities=25% Similarity=0.402 Sum_probs=216.5
Q ss_pred HhcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
..++|+..+.||+|+||.||++...+ +..||+|.+.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 35678888999999999999998875 7889999987543 345678999999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 384 FLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999764 45599999999999999999999965 999999999999999999999999999998766555
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.......+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||....... ...... .. .. .
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~----~~-~~-------~ 231 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLE----KD-YR-------M 231 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHH----TT-CC-------C
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh----cc-CC-------C
Confidence 44555667889999999999999999999999999999999 999987543221 111111 10 00 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
..+...+..+.+++.+|++.||++|||++|+++.|++++.+
T Consensus 232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11223346789999999999999999999999999988754
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.7e-42 Score=336.36 Aligned_cols=254 Identities=28% Similarity=0.472 Sum_probs=195.5
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch----hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... ++.||+|.+..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457788899999999999999875 88999999865322 2246788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC--------CCcEEEeecCc
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------NLEARVSDFGL 453 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfgl 453 (583)
|||+++++|.+++. ...+++..+..++.|++.||+|||+....+++||||||+||+++. ++.+||+|||+
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999999996 357999999999999999999999752123999999999999986 67899999999
Q ss_pred ccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc
Q 007959 454 AKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (583)
Q Consensus 454 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (583)
+........ ....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...... .....
T Consensus 163 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~~~~ 232 (271)
T 3dtc_A 163 AREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA------VAYGVA-MNKLA 232 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHH-TSCCC
T ss_pred ccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHhhh-cCCCC
Confidence 986654322 23468999999999999999999999999999999999999997532211 001111 11111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~ 579 (583)
...+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 -------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111223346789999999999999999999999999864
No 70
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.1e-42 Score=341.31 Aligned_cols=260 Identities=24% Similarity=0.391 Sum_probs=201.7
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch--hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE--GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|+..+.||+|+||.||+|...+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 56888899999999999999998899999999865332 2346788999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++ +|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 975 9999998766789999999999999999999995 4999999999999999999999999999986643222 2
Q ss_pred eeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc--------cccc
Q 007959 465 TTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR--------QREI 535 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 535 (583)
.....||+.|+|||++.+. .++.++||||+|+++|||++|+.||........ +..... ...... ....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFR-ILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHH-HHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH-HHCCCChhhchhhhcccc
Confidence 2334689999999998764 589999999999999999999999976432211 111111 000000 0000
Q ss_pred cCCCC--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNC--------EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~--------~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.++.. .........++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111 0111234567889999999999999999999875
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=351.63 Aligned_cols=252 Identities=26% Similarity=0.343 Sum_probs=208.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||.||++... +|+.||+|.+..........+.+|++++..++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467888999999999999999876 5889999999876555567799999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec--CCCcEEEeecCcccccCcCCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--GNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
+++|+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 99999999998766679999999999999999999995 4999999999999997 457899999999987765432
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ......... ..+++ .
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~i~~~~---~~~~~---~ 272 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCD---WEFDE---D 272 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCC---CCCCS---S
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC---CCCCc---c
Confidence 234569999999999999999999999999999999999999997643211 111111110 00111 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11233467899999999999999999999986
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-41 Score=348.60 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=204.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh------hHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.+.|+..+.||+|+||.||++... +|..||+|.+.+.... ..+.+.+|+.++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356888999999999999999876 5899999999754321 246789999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC----cEEEeecCcc
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLA 454 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~ 454 (583)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999975 4579999999999999999999995 4999999999999998776 7999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
........ .....||+.|+|||++.+..++.++||||+|+++|+|++|..||....... ......... .
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~~~i~~~~---~ 235 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITAVS---Y 235 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC---C
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcC---C
Confidence 87654322 234569999999999999999999999999999999999999997643221 111111000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+++ ......+..+.+++.+||..||++|||+.|+++
T Consensus 236 ~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDE---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCc---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 001123466889999999999999999999874
No 73
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9.9e-42 Score=335.73 Aligned_cols=254 Identities=23% Similarity=0.336 Sum_probs=205.4
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC--CceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP--TSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 381 (583)
.++|+..+.||+|+||.||+|... +..||+|++... .....+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999985 889999998754 234456799999999999999999999999877 778999
Q ss_pred EEcCCCCchhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 382 YDFLPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|||+++|+|.++++.... .+++..+..++.|++.||+|||+. ..+++||||||+||+++.++.++++|||+.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~ 166 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence 999999999999987543 599999999999999999999954 223999999999999999999999999887653332
Q ss_pred CceeeeeeccccccccccccccCCCCc---ccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATE---KTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
...||+.|+|||.+.+..++. ++||||||+++|||++|+.||....... ......... ..
T Consensus 167 ------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~-~~---- 229 (271)
T 3kmu_A 167 ------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME------IGMKVALEG-LR---- 229 (271)
T ss_dssp ------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH------HHHHHHHSC-CC----
T ss_pred ------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH------HHHHHHhcC-CC----
Confidence 235899999999998765444 8999999999999999999997532211 111111111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
+ ..+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 230 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 P---TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 1122344678999999999999999999999999998754
No 74
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.9e-42 Score=346.38 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=202.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch-hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467888999999999999999876 689999999864322 234568899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc-
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES- 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 462 (583)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+.....
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999975 4569999999999999999999995 5999999999999999999999999999986643322
Q ss_pred eeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||+...... .....+.. . ....
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~----~---~~~~----- 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE----K---KTYL----- 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHHHT----T---CTTS-----
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHhc----c---cccC-----
Confidence 22234679999999999987775 789999999999999999999997543221 11111110 0 0000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011233467889999999999999999999875
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.9e-42 Score=346.02 Aligned_cols=246 Identities=24% Similarity=0.398 Sum_probs=203.4
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|...+.||+|+||.||+|.. .+++.||+|.+.+.. ......+.+|+++++.++||||+++++++.++...++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45788899999999999999987 468999999986532 22345789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 7899999876 35699999999999999999999965 99999999999999999999999999998765433
Q ss_pred ceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. .....||+.|+|||.+.+..+ ++++||||+|+++|+|++|+.||+....... ...+....
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~~~~ 224 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVNSCV 224 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCCSSC
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHHcCC
Confidence 2 234579999999999988776 7899999999999999999999976432211 01111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+...+..+.+++.+||+.||.+|||++|+++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1123334567899999999999999999999875
No 76
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.2e-41 Score=334.42 Aligned_cols=252 Identities=29% Similarity=0.546 Sum_probs=203.1
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhh-------HHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGF-------DRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
++|+..+.||+|+||.||++... +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 56788899999999999999875 68999999986432211 167899999999999999999999987655
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCCeEecCCCc-----EEEeec
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPR--IIHRDIKSSNILLDGNLE-----ARVSDF 451 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~Df 451 (583)
++||||+++|+|.+.+......+++..+..++.|++.||+|||+. + ++||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999999987777899999999999999999999954 6 999999999999987776 999999
Q ss_pred CcccccCcCCceeeeeecccccccccccc--ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc
Q 007959 452 GLAKLLEDEESHITTIVAGTFGYLAPEYM--QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (583)
Q Consensus 452 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (583)
|+++..... .....||+.|+|||.+ ....++.++||||+|+++|||++|+.||+...... .........
T Consensus 174 g~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~- 244 (287)
T 4f0f_A 174 GLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIRE- 244 (287)
T ss_dssp TTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHH-
T ss_pred Ccccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhc-
Confidence 999854432 3345689999999998 34567899999999999999999999997543221 111111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 579 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~ 579 (583)
..... ..+...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 245 ~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 EGLRP-------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp SCCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cCCCC-------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111 12233446799999999999999999999999999864
No 77
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=345.19 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=202.9
Q ss_pred cCCCccceeeecCceEEEEEEEcC-----CcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
+.|+..+.||+|+||.||+|.... +..||+|.+... .......+.+|++++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345667899999999999997653 236999998754 33345678999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.+++......+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 999999999999998777789999999999999999999995 49999999999999999999999999999876543
Q ss_pred Ccee--eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 461 ESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 461 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
.... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||....... . .........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~---~---~~~~~~~~~------ 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE---V---MKAINDGFR------ 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---H---HHHHHTTCC------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH---H---HHHHHCCCc------
Confidence 3211 122346788999999998999999999999999999999 999996532211 1 111111100
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
...+...+..+.+++.+||+.||++||++.++++.|++++.
T Consensus 269 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 ---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01122344678999999999999999999999999998765
No 78
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=340.97 Aligned_cols=254 Identities=26% Similarity=0.440 Sum_probs=198.8
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.++|+..+.||+|+||.||++... ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 356778899999999999999875 788999998753 345678999999999999999999999874 478999999
Q ss_pred CCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc-EEEeecCcccccCcCCc
Q 007959 386 PGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE-ARVSDFGLAKLLEDEES 462 (583)
Q Consensus 386 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfgl~~~~~~~~~ 462 (583)
++|+|.++++... ..+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~- 160 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM- 160 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-
Confidence 9999999997643 24889999999999999999999642368999999999999998876 7999999997654321
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||+...... ........ ... ...
T Consensus 161 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~-~~~--------~~~ 224 (307)
T 2eva_A 161 ---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVH-NGT--------RPP 224 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHH-TTC--------CCC
T ss_pred ---ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHh-cCC--------CCC
Confidence 23458999999999999999999999999999999999999997532211 11111111 110 011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.....+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 112234678899999999999999999999999998754
No 79
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.4e-41 Score=338.10 Aligned_cols=252 Identities=23% Similarity=0.378 Sum_probs=205.1
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-C-------cEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-G-------NVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
.++|...+.||+|+||.||+|.... + ..||+|.+........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3567788999999999999997653 3 4799999987666667889999999999999999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc--------EEEe
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--------ARVS 449 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~ 449 (583)
.++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeec
Confidence 999999999999999998766669999999999999999999995 49999999999999998877 9999
Q ss_pred ecCcccccCcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCC-CCcchhcccchHHHHHHHHh
Q 007959 450 DFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRP-TDASFIEKGLNIVGWLNFLI 527 (583)
Q Consensus 450 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p-~~~~~~~~~~~~~~~~~~~~ 527 (583)
|||++...... ....||..|+|||.+.+ ..++.++||||||+++|||++|..| +....... ......
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~------~~~~~~ 232 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR------KLQFYE 232 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHH
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH------HHHHhh
Confidence 99999765432 22458899999999987 6799999999999999999996554 43321111 111111
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.. ..+. ...+.++.+++.+||+.||++|||+.|+++.|++++..
T Consensus 233 ~~----~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 233 DR----HQLP-------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp TT----CCCC-------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred cc----CCCC-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 10 0111 11124578999999999999999999999999988653
No 80
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.9e-42 Score=355.29 Aligned_cols=259 Identities=22% Similarity=0.343 Sum_probs=207.7
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 376 (583)
+.....++|+..+.||+|+||.||++... +|+.||+|++.+.. ....+.+.+|.+++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33344678999999999999999999885 68999999997532 222345889999999999999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..++||||+++|+|.++++.....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 9999999999999999998766689999999999999999999995 5999999999999999999999999999987
Q ss_pred cCcCCceeeeeeccccccccccccc-------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQ-------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (583)
............+||+.|+|||++. ...++.++|||||||++|||++|+.||........ .......
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~ 285 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET------YGKIVHY 285 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTH
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH------HHHHHhc
Confidence 7655444444568999999999987 35689999999999999999999999976432211 1111110
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDR---PTMHRVVQ 574 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R---Pt~~evl~ 574 (583)
.. . . ..+......+.++.+++.+||. +|++| |+++|+++
T Consensus 286 ~~-~-~---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 286 KE-H-L---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HH-H-C---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cc-C-c---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 00 0 0 0111112234678999999999 99998 58888764
No 81
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-41 Score=349.90 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=199.9
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc---hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 380 (583)
.++|+..+.||+|+||.||++.... ++.||+|++++.. ....+.+..|..++.++ +||||+++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 5688899999999999999998764 7889999997642 22234578899999886 89999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999999976 4569999999999999999999995 49999999999999999999999999999864322
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc--chHHHHHHHHhhccccccccCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG--LNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
. ......+||+.|+|||++.+..++.++||||+|+++|||++|+.||+....... ................
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 2 223456799999999999999999999999999999999999999964322111 1111111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
..+...+.++.+++.+||+.||++||++
T Consensus 280 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1222344678999999999999999996
No 82
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=338.44 Aligned_cols=257 Identities=25% Similarity=0.411 Sum_probs=209.1
Q ss_pred cCCCccc-eeeecCceEEEEEEEc---CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 307 ETLDDDH-IIGSGGFGTVYKLAMD---DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 307 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
++|...+ .||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 3444445 8999999999999754 57889999997643 345677999999999999999999999994 5568999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++++|.+++......+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 99999999999998766779999999999999999999995 499999999999999999999999999998775443
Q ss_pred ceee--eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 462 SHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 462 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... ....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .... .....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~---i~~~~-------- 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAF---IEQGK-------- 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHH---HHTTC--------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---HHHH---HhcCC--------
Confidence 3222 22346889999999998899999999999999999998 999997543221 1111 11110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+...+.++.+++.+||+.||++||++.++++.|+++..+
T Consensus 231 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 231 -RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0112233457799999999999999999999999999988754
No 83
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.5e-42 Score=349.86 Aligned_cols=264 Identities=23% Similarity=0.379 Sum_probs=212.3
Q ss_pred HHHHhcCCCccceeeecCceEEEEEEEcC------CcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCceeeeeeeee
Q 007959 302 IIKKLETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLVNLRGYCN 373 (583)
Q Consensus 302 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 373 (583)
.....++|+..+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33345678889999999999999998653 2479999997643 33456789999999999 8999999999999
Q ss_pred CCCceEEEEEcCCCCchhhHhhhc-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHER-------------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEE
Confidence 999999999999999999999753 2358999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 441 DGNLEARVSDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....... .
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--K 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--H
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--H
Confidence 99999999999999876544322 2233457889999999999999999999999999999999 999987532221 1
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... ..... .. .. .+...+..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 276 ~~~----~~~~~-~~----~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 276 FYK----LVKDG-YQ----MA---QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHH----HHHHT-CC----CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----HHhcC-CC----CC---CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 111 11111 00 00 1112246788999999999999999999999999988754
No 84
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.2e-42 Score=347.59 Aligned_cols=264 Identities=20% Similarity=0.353 Sum_probs=213.6
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEc------CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeee
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD------DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCN 373 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 373 (583)
+.....++|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678889999999999999998765 36789999997543 234557899999999999999999999999
Q ss_pred CCCceEEEEEcCCCCchhhHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHERS---------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL 444 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 444 (583)
+....++||||+++|+|.++++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCC
Confidence 9999999999999999999997532 457999999999999999999995 4999999999999999999
Q ss_pred cEEEeecCcccccCcCCcee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHH
Q 007959 445 EARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGW 522 (583)
Q Consensus 445 ~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~ 522 (583)
.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~ 249 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QV 249 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------HH
Confidence 99999999998665433221 223457889999999999999999999999999999999 89998653221 11
Q ss_pred HHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 523 LNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....... .....+...+..+.+++.+||+.||++|||+.|+++.|++.+.+
T Consensus 250 ~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 250 LRFVMEG---------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHcC---------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1111111 11112233446789999999999999999999999999987653
No 85
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-41 Score=350.01 Aligned_cols=268 Identities=17% Similarity=0.226 Sum_probs=206.5
Q ss_pred hcCCCccceeeecCceEEEEEEEcC------CcEEEEEeecccchhh-----------HHHHHHHHHHHHhCCCCceeee
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD------GNVFALKRIDKLNEGF-----------DRFFERELEILGSIKHRYLVNL 368 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 368 (583)
.++|+..+.||+|+||.||+|...+ +..||+|.+....... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3478889999999999999998865 4789999987543211 1224456667778899999999
Q ss_pred eeeeeCC----CceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec--C
Q 007959 369 RGYCNSP----TSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--G 442 (583)
Q Consensus 369 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~ 442 (583)
++++... ...++||||+ +++|.+++......+++..++.++.||+.||+|||+ .+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCC
Confidence 9998664 4479999999 999999998876789999999999999999999995 4999999999999999 8
Q ss_pred CCcEEEeecCcccccCcCCcee------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc
Q 007959 443 NLEARVSDFGLAKLLEDEESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG 516 (583)
Q Consensus 443 ~~~~kl~Dfgl~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~ 516 (583)
++.+||+|||+++.+....... .....||+.|+|||++.+..++.++||||||+++|||+||+.||.......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~- 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP- 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-
Confidence 8999999999998765433211 123459999999999999999999999999999999999999997533221
Q ss_pred chHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 517 LNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
........... ......+++.+. ....+.++.+++..||+.||++||++.+|++.|++++.+
T Consensus 269 -~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 -KYVRDSKIRYR-ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp -HHHHHHHHHHH-HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhh-hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111111111 111122211111 012236789999999999999999999999999998764
No 86
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.8e-42 Score=350.03 Aligned_cols=244 Identities=23% Similarity=0.357 Sum_probs=197.4
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 379 (583)
..++|+..+.||+|+||.||++... +|+.||+|++.+. .....+.+.+|.+++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999876 5899999999753 223346688899999988 7999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++|+|.++++. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999999999976 4569999999999999999999995 4999999999999999999999999999985433
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.. ......+||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ......... .
T Consensus 177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~~~---~----- 241 (353)
T 3txo_A 177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEAILNDE---V----- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC---C-----
T ss_pred CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH------HHHHHHcCC---C-----
Confidence 22 22345679999999999998899999999999999999999999997643221 111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
..+......+.+++.+|++.||++||++
T Consensus 242 --~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 242 --VYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred --CCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 1122234678899999999999999998
No 87
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=342.17 Aligned_cols=250 Identities=26% Similarity=0.351 Sum_probs=203.6
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh------hHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
+.|+..+.||+|+||.||++... +|..||+|.+...... ..+.+.+|++++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45778899999999999999876 5899999998753221 3567999999999999999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC----cEEEeecCccc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLAK 455 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~~ 455 (583)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++ .+||+|||++.
T Consensus 91 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999999975 4679999999999999999999995 4999999999999999877 89999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ........ ..
T Consensus 167 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~---~~ 235 (326)
T 2y0a_A 167 KIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------LANVSAVN---YE 235 (326)
T ss_dssp ECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------HHHHHHTC---CC
T ss_pred ECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------HHHHHhcC---CC
Confidence 7654322 2335699999999999989999999999999999999999999975432211 11110000 00
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
+.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FED---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCH---HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCc---cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 001122466889999999999999999999986
No 88
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.6e-42 Score=344.23 Aligned_cols=271 Identities=26% Similarity=0.409 Sum_probs=216.9
Q ss_pred CCCCHHHHHHHhcCCCccceeeecCceEEEEEEE------cCCcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCcee
Q 007959 295 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLV 366 (583)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv 366 (583)
.++...+.....++|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++.++ +||||+
T Consensus 15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 94 (316)
T 2xir_A 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94 (316)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence 3555566656677899999999999999999974 346889999997643 33456789999999999 799999
Q ss_pred eeeeeeeCCC-ceEEEEEcCCCCchhhHhhhcCCC---------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 007959 367 NLRGYCNSPT-SKLLIYDFLPGGSLDEALHERSEQ---------------LDWDARLNIIMGAAKGLAYLHHDCSPRIIH 430 (583)
Q Consensus 367 ~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~---------------l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 430 (583)
++++++...+ ..++||||+++|+|.+++...... +++..+..++.|++.||.|||+ .+|+|
T Consensus 95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H 171 (316)
T 2xir_A 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIH 171 (316)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred eEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccc
Confidence 9999987654 489999999999999999865332 8999999999999999999995 49999
Q ss_pred cCCCCCCeEecCCCcEEEeecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCC
Q 007959 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPT 508 (583)
Q Consensus 431 ~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~ 508 (583)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~ 251 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred ccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987654433 22334568899999999999999999999999999999998 99998
Q ss_pred CcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....... ... . ....... . ..+...+..+.+++.+||+.||++|||+.|+++.|++++.+
T Consensus 252 ~~~~~~~--~~~---~-~~~~~~~-----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 252 PGVKIDE--EFC---R-RLKEGTR-----M---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp TTCCCSH--HHH---H-HHHHTCC-----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccchhH--HHH---H-HhccCcc-----C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 6533211 111 1 1111100 0 01122346789999999999999999999999999998764
No 89
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-41 Score=346.07 Aligned_cols=249 Identities=23% Similarity=0.374 Sum_probs=198.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC-------
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT------- 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 376 (583)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888899999999999999887 78999999997533 335677999999999999999999999985543
Q ss_pred --------------------------------------------------ceEEEEEcCCCCchhhHhhhcC--CCCCHH
Q 007959 377 --------------------------------------------------SKLLIYDFLPGGSLDEALHERS--EQLDWD 404 (583)
Q Consensus 377 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~--~~l~~~ 404 (583)
..++||||+++|+|.++++... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 2789999999999999998642 346777
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce-----------eeeeeccccc
Q 007959 405 ARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH-----------ITTIVAGTFG 473 (583)
Q Consensus 405 ~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~-----------~~~~~~gt~~ 473 (583)
.++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........ ......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999995 49999999999999999999999999999877654321 1233569999
Q ss_pred cccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHH
Q 007959 474 YLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLA 553 (583)
Q Consensus 474 y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 553 (583)
|+|||.+.+..++.++||||+|+++|||++|..|+..... .... ......+.........+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--------IITD---------VRNLKFPLLFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH--------HHHH---------HHTTCCCHHHHHHCHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH--------HHHH---------hhccCCCcccccCChhHHH
Confidence 9999999999999999999999999999999877432110 0000 0011111122344567889
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 007959 554 VATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 554 l~~~cl~~dp~~RPt~~evl~ 574 (583)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 90
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.3e-41 Score=343.42 Aligned_cols=260 Identities=24% Similarity=0.389 Sum_probs=206.6
Q ss_pred CCccceeeecCceEEEEEEEc-----CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeC--CCceEE
Q 007959 309 LDDDHIIGSGGFGTVYKLAMD-----DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNS--PTSKLL 380 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 380 (583)
|+..+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 477899999999999988653 58899999997643 3445679999999999999999999999976 456789
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999753 49999999999999999999995 49999999999999999999999999999877654
Q ss_pred Cce--eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc------chHHH--HHHHHhhcc
Q 007959 461 ESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG------LNIVG--WLNFLISED 530 (583)
Q Consensus 461 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~------~~~~~--~~~~~~~~~ 530 (583)
... ......+|..|+|||.+.+..++.++||||+|+++|||+||+.||........ ..... .........
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 332 22335678889999999998999999999999999999999999865322100 00000 000011000
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.....+...+.++.+++.+||+.||++|||++|+++.|+++..
T Consensus 268 --------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 268 --------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 0111223345779999999999999999999999999998754
No 91
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3e-41 Score=337.46 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=204.1
Q ss_pred cCCCccceeeecCceEEEEEEEcC----CcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeee-eCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 380 (583)
..|+..+.||+|+||.||+|...+ +..+|+|.+.... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356677999999999999998653 2368999887533 34456789999999999999999999986 45667899
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.++++.....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 999999999999998767779999999999999999999995 49999999999999999999999999999876543
Q ss_pred Cce---eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhcccccccc
Q 007959 461 ESH---ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (583)
Q Consensus 461 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (583)
... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||...... ..... ..... ..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~---~~~~~--~~-- 251 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVY---LLQGR--RL-- 251 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHHH---HHTTC--CC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHHH---HhcCC--CC--
Confidence 321 1233567889999999999999999999999999999999 55555543221 11111 11110 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
..+...+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 252 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 -----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112234678999999999999999999999999999875
No 92
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.9e-41 Score=341.30 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=200.8
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 380 (583)
.++|+..+.||+|+||.||++... +++.||+|++.+.. ....+.+.+|..++.++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467888999999999999999876 48899999997542 23345688899999988 89999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999976 3569999999999999999999995 49999999999999999999999999999864332
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccc--hHHHHHHHHhhccccccccCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL--NIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 538 (583)
. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||+........ ...............
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 2234467999999999999999999999999999999999999999753221110 011111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
..+...+.++.+++.+||+.||++||++
T Consensus 237 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1122344678999999999999999996
No 93
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-42 Score=351.25 Aligned_cols=255 Identities=26% Similarity=0.427 Sum_probs=195.4
Q ss_pred CCccceeeecCceEEEEEEEcC--C--cEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeC-CCceEEEE
Q 007959 309 LDDDHIIGSGGFGTVYKLAMDD--G--NVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNS-PTSKLLIY 382 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 382 (583)
|...+.||+|+||.||+|...+ + ..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 4556889999999999998643 2 368999886533 3445779999999999999999999998754 56789999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++|+|.++++.....+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999999998777779999999999999999999995 4999999999999999999999999999986644322
Q ss_pred e---eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 463 H---ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 463 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
. ......+|+.|+|||.+.+..++.++||||||+++|||+| |.+||...... ...... .... . .
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~~~---~~~~--~-~--- 315 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYL---LQGR--R-L--- 315 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHHHH---HTTC--C-C---
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHHHH---HcCC--C-C---
Confidence 1 1233457889999999999999999999999999999999 67777653222 111111 1111 0 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
..+...+..+.+++.+||+.||++|||++|+++.|++++.
T Consensus 316 ---~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 ---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112234678999999999999999999999999998764
No 94
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2e-41 Score=344.38 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=210.0
Q ss_pred hcCCCccceeeecCceEEEEEEEc--------CCcEEEEEeecccc-hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD--------DGNVFALKRIDKLN-EGFDRFFERELEILGSI-KHRYLVNLRGYCNSP 375 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 375 (583)
.++|+..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888999999999999999863 46789999997543 33456789999999999 899999999999999
Q ss_pred CceEEEEEcCCCCchhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 376 TSKLLIYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 99999999999999999997643 248999999999999999999995 499999999999999
Q ss_pred cCCCcEEEeecCcccccCcCCcee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 441 DGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---
Confidence 999999999999998765543222 233457889999999998899999999999999999999 999987542221
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.......... ...+...+..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus 268 ---~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 268 ---LFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ---HHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHhcCCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111111110 01122334678999999999999999999999999998864
No 95
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4e-42 Score=348.19 Aligned_cols=256 Identities=26% Similarity=0.400 Sum_probs=203.1
Q ss_pred cCCCccceeeecCceEEEEEEEcC-Cc----EEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-GN----VFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|+..+.||+|+||.||+|.... +. .||+|.+.... ......+.+|+.++++++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 467788999999999999998653 44 37888775432 223355778999999999999999999986 456889
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|+||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 999999999999998766679999999999999999999995 49999999999999999999999999999977554
Q ss_pred Cce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 461 ESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
... ......||..|+|||.+.+..++.++||||||+++|||+| |+.||....... ...... ... ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~----~~~-~~~--- 237 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLE----KGE-RLA--- 237 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHH----TTC-BCC---
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHH----cCC-CCC---
Confidence 332 2344568889999999999999999999999999999999 999997643221 111111 110 000
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 238 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 ----QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111123457889999999999999999999999998764
No 96
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=349.35 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=199.6
Q ss_pred CccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcCCCC
Q 007959 310 DDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGG 388 (583)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 388 (583)
...+.||+|+||.||++... +|..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 34578999999999999875 68999999998766566778999999999999999999999999999999999999999
Q ss_pred chhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe--cCCCcEEEeecCcccccCcCCceeee
Q 007959 389 SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL--DGNLEARVSDFGLAKLLEDEESHITT 466 (583)
Q Consensus 389 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgl~~~~~~~~~~~~~ 466 (583)
+|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 9999998766679999999999999999999995 499999999999999 5678999999999987754432 23
Q ss_pred eeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHH
Q 007959 467 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE 546 (583)
Q Consensus 467 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (583)
...||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... ..... ....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~--~~~~~----~~~~ 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRW--DLEDE----EFQD 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCC--CSCSG----GGTT
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccC--CCChh----hhcc
Confidence 3469999999999998899999999999999999999999997643221 1111111100 00000 1122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 547 SLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 547 ~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+.++.+++.+||+.||++|||+.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3467899999999999999999999986
No 97
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.7e-42 Score=370.36 Aligned_cols=257 Identities=27% Similarity=0.425 Sum_probs=211.2
Q ss_pred HhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
..++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 3466788899999999999999999888999999976432 35679999999999999999999999876 678999999
Q ss_pred CCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++|+|.++++.. ...+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999764 4569999999999999999999995 49999999999999999999999999999876543222
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ .......... . .
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~--~-------~ 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYR--M-------P 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCC--C-------C
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCC--C-------C
Confidence 2233456789999999999999999999999999999999 999997542211 1111111100 0 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.+...+..+.+++.+||+.||++|||+++|++.|++++.
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 122334678999999999999999999999999998764
No 98
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-41 Score=336.28 Aligned_cols=260 Identities=23% Similarity=0.325 Sum_probs=201.2
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
..++|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++.+++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999876 68899999987542 2334678999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|+||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999976 3569999999999999999999995 49999999999999999999999999999876554
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............ .
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~------~ 254 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPR------P 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCC------G
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCC------c
Confidence 433334557899999999999999999999999999999999999999764322 111111111000 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhh
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRP-TMHRVVQILESEIY 581 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RP-t~~evl~~L~~~~~ 581 (583)
.......+.++.+++.+||+.||++|| +++++++.|++.+.
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 011223346788999999999999999 99999999998764
No 99
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-41 Score=336.43 Aligned_cols=258 Identities=26% Similarity=0.393 Sum_probs=205.1
Q ss_pred CCCccceeeecCceEEEEEEEcC-C---cEEEEEeecccch-hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce-EEE
Q 007959 308 TLDDDHIIGSGGFGTVYKLAMDD-G---NVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK-LLI 381 (583)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 381 (583)
.|...+.||+|+||+||+|...+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34456889999999999997643 2 3799999876433 3456789999999999999999999999776665 899
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
+||+.+|+|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 99999999999998767789999999999999999999995 499999999999999999999999999998664432
Q ss_pred c---eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 462 S---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 462 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
. .......+|..|+|||.+.+..++.++||||||+++|+|++|..|+...... ........ ...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~---~~~-------- 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFLA---QGR-------- 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHHH---TTC--------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHhh---cCC--------
Confidence 1 1223356789999999999999999999999999999999966554322111 11111111 110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+...+..+.+++.+|++.||++|||++++++.|++++.+
T Consensus 246 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 246 -RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0011222346789999999999999999999999999998753
No 100
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-41 Score=339.92 Aligned_cols=245 Identities=25% Similarity=0.383 Sum_probs=204.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +|+.||+|.+.+.. ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467888999999999999999876 68999999997532 22346688899999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++++||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999999976 456999999999999999999999 559999999999999999999999999999875432
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .......... . .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~------~-- 221 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNAE-L------R-- 221 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHCC-C------C--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-C------C--
Confidence 23457999999999999999999999999999999999999999754321 1111111111 0 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~ 574 (583)
.+.....++.+++.+|++.||++|| +++|+++
T Consensus 222 -~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 -FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1122346788999999999999999 8888764
No 101
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.4e-41 Score=334.03 Aligned_cols=263 Identities=19% Similarity=0.243 Sum_probs=206.7
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeee-eCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||++.. .+++.||+|.+..... ...+.+|++++..++|++++..++++ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 46788999999999999999986 5688999998654322 23578899999999988877777766 66777899999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCcC
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|+ +++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 999999998767789999999999999999999995 499999999999999 78899999999999876554
Q ss_pred Cce------eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 461 ESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 461 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................ .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-h
Confidence 321 123457999999999999999999999999999999999999999764333222222111111100000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.. ....+.++.+++.+||+.||++|||++++++.|++++.+
T Consensus 241 ~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 241 VL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 011236799999999999999999999999999998764
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.6e-41 Score=352.68 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=206.9
Q ss_pred HHHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 302 IIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 302 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
+....++|+..+.||+|+||.||++... +++.||+|++.+... ...+.+.+|+.+++.++||||+++++++.+...
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3344678999999999999999999876 488999999875321 223458889999999999999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||+++|+|.++++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++..
T Consensus 144 ~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9999999999999999975 458999999999999999999995 49999999999999999999999999999877
Q ss_pred CcCCceeeeeeccccccccccccccCC----CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSGR----ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (583)
...........+||+.|+|||++.+.. ++.++||||||+++|||++|+.||....... ............
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~ 292 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSL 292 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHC
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------HHHHHHhccccc
Confidence 655444445678999999999997655 8899999999999999999999997643221 111111110000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDD--RPTMHRVVQ 574 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~--RPt~~evl~ 574 (583)
. + +.. ...+.++.+++.+|++.+|.+ ||+++||++
T Consensus 293 ~-~-p~~----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 293 T-F-PDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp C-C-CTT----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred c-C-CCc----ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0 0 111 123367889999999999988 999999875
No 103
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.5e-41 Score=335.13 Aligned_cols=261 Identities=21% Similarity=0.329 Sum_probs=202.0
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
++|+..+.||+|+||+||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 56888899999999999999876 58899999997532 3334678899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
|+++ ++.+.+......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9975 7777776666789999999999999999999995 4999999999999999999999999999987653322
Q ss_pred eeeeeccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc------cc-
Q 007959 464 ITTIVAGTFGYLAPEYMQSGR-ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR------EI- 535 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~- 535 (583)
......||+.|+|||++.+.. ++.++||||+|+++|||++|..|+....... ................ ..
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH--HHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhhhhhcccc
Confidence 223456899999999987765 8999999999999999999888853321110 1111111000000000 00
Q ss_pred ---------cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 ---------IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ---------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..............++.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000111122345577889999999999999999999975
No 104
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-40 Score=332.68 Aligned_cols=263 Identities=19% Similarity=0.243 Sum_probs=209.4
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeee-eCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC-NSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|++++..++|+++++.++++ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 35788899999999999999986 5789999998865432 34688999999999998877777665 56677899999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCcC
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|+ +++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 899999998667789999999999999999999995 499999999999999 48889999999999876654
Q ss_pred Cce------eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 461 ESH------ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 461 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................ .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-H
Confidence 331 123457999999999999999999999999999999999999999764332222222111111100000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.+ ....+.++.+++.+||+.||++|||+++|++.|++++.+
T Consensus 241 ~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 241 VL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred HH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 01 112236789999999999999999999999999998764
No 105
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=342.75 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=201.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCc----EEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGN----VFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
++|+..+.||+|+||.||+|... +++ +||+|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888899999999999999865 344 3577777543 3344678999999999999999999999998765 789
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|++|+++|+|.+++......+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 999999999999998877789999999999999999999995 49999999999999999999999999999876543
Q ss_pred Ccee-eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 461 ESHI-TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 461 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+...... ...... ...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~----~~~------- 236 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE----KGE------- 236 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTC-------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHH----cCC-------
Confidence 3222 233456889999999999999999999999999999999 999997643321 111111 110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
....+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 237 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 -RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 001122344678999999999999999999999999998764
No 106
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=332.21 Aligned_cols=250 Identities=25% Similarity=0.438 Sum_probs=186.1
Q ss_pred HhcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccch---hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
..++|+..+.||+|+||.||+|.. .+|+.||+|.+..... ...+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 356788899999999999999987 4689999999865322 224678999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++++|.+++......+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 999999999999998766789999999999999999999995 49999999999999999999999999999876533
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
.. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......... ..+.....
T Consensus 166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~~ 229 (278)
T 3cok_A 166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLADY 229 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC
T ss_pred CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhccc
Confidence 22 123356899999999999889999999999999999999999999754322110 00000000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|||++++++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 -EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112233467889999999999999999999875
No 107
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=339.27 Aligned_cols=264 Identities=28% Similarity=0.437 Sum_probs=211.1
Q ss_pred cCCCccceeeecCceEEEEEEE-----cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC--ceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-----DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 379 (583)
++|+..+.||+|+||.||++.. .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577889999999999999984 368899999998766666778999999999999999999999986644 689
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 9999999999999998776779999999999999999999995 4999999999999999999999999999987765
Q ss_pred CCcee--eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcc------c---chHHHHHHHHhh
Q 007959 460 EESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK------G---LNIVGWLNFLIS 528 (583)
Q Consensus 460 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~------~---~~~~~~~~~~~~ 528 (583)
..... .....++..|+|||.+.+..++.++||||||+++|||+||..|+......- . ............
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 43322 123457778999999998889999999999999999999999976432110 0 000000011111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
... ....+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 278 ~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 278 NNG--------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TTC--------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCC--------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 100 011123344679999999999999999999999999998754
No 108
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.8e-41 Score=341.49 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=202.1
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-----hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-----EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
+.|+..+.||+|+||.||++... +|+.||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46888899999999999999875 58999999986422 1135679999999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc---EEEeecCcc
Q 007959 381 IYDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLA 454 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~ 454 (583)
||||+++|+|.+.+... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999888653 3358999999999999999999995 49999999999999986554 999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... . ........ .
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~---~~~i~~~~-~-- 249 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER----L---FEGIIKGK-Y-- 249 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH----H---HHHHHHTC-C--
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH----H---HHHHHcCC-C--
Confidence 87654332 233457999999999999999999999999999999999999999764211 1 11111000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..++. .....+.++.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 KMNPR---QWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCHH---HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCcc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 00123467899999999999999999999975
No 109
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=350.22 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=203.9
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456888999999999999999764 68899999986533 334567899999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec---CCCcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD---GNLEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgl~~~~~~ 459 (583)
||+++|+|.+.+.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++ .++.+||+|||++.....
T Consensus 90 E~~~gg~L~~~i~~-~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVA-REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999976 4569999999999999999999995 4999999999999998 567899999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... . ..... ... .....+.
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~---~---~~~i~-~~~-~~~~~~~ 236 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR---L---YQQIK-AGA-YDFPSPE 236 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---H---HHHHH-HTC-CCCCTTT
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH---H---HHHHH-hCC-CCCCccc
Confidence 332 2234579999999999999999999999999999999999999996543211 1 11111 110 0111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
+ ...+.++.+++.+||+.||++|||+.|+++
T Consensus 237 ~----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 237 W----DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp T----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c----ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 233467889999999999999999999986
No 110
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=339.28 Aligned_cols=244 Identities=22% Similarity=0.288 Sum_probs=193.6
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 382 (583)
++|+..+.||+|+||+||+|... +|+.||||++.... ......+..|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888899999999999999887 68999999886532 22334455566655554 9999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+ +++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 679999998877789999999999999999999995 489999999999999999999999999998765432
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
......||+.|+|||++.+ .++.++||||||+++|||++|..|+..... +.. . ........
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~~-~-~~~~~~~~------- 272 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQQ-L-RQGYLPPE------- 272 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HHH-H-TTTCCCHH-------
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHH-H-hccCCCcc-------
Confidence 2234569999999998875 799999999999999999999776543211 000 0 00000000
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||++|+++
T Consensus 273 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11123467899999999999999999999985
No 111
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=369.28 Aligned_cols=249 Identities=25% Similarity=0.432 Sum_probs=201.0
Q ss_pred eeeecCceEEEEEEEc---CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcCCCCc
Q 007959 314 IIGSGGFGTVYKLAMD---DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (583)
Q Consensus 314 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 389 (583)
.||+|+||.||+|... ++..||||+++... ....+.|.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999775 46679999997643 3346789999999999999999999999976 56899999999999
Q ss_pred hhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceee--ee
Q 007959 390 LDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT--TI 467 (583)
Q Consensus 390 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~--~~ 467 (583)
|.+++......+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 999998777779999999999999999999995 4999999999999999999999999999987654332222 22
Q ss_pred eccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHH
Q 007959 468 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE 546 (583)
Q Consensus 468 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (583)
..+|+.|+|||++.+..++.++||||||+++|||+| |+.||......+ .... ...... ...+..
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~~---i~~~~~---------~~~p~~ 563 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAF---IEQGKR---------MECPPE 563 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHHH---HHTTCC---------CCCCTT
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH---HHcCCC---------CCCCCc
Confidence 345689999999999999999999999999999998 999997643221 1111 111110 011223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 547 SLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 547 ~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.+.++.+++.+||+.||++||++.+|++.|++...
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 45779999999999999999999999999998754
No 112
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.5e-42 Score=347.14 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=203.4
Q ss_pred HHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCc
Q 007959 303 IKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 377 (583)
....++|...+.||+|+||.||++... +|+.||+|.+++.. ......+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999886 58899999997532 22345678899998876 99999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999999976 3569999999999999999999995 49999999999999999999999999999864
Q ss_pred CcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... .........
T Consensus 169 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~------- 234 (345)
T 1xjd_A 169 MLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------LFHSIRMDN------- 234 (345)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-------
T ss_pred ccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHhCC-------
Confidence 33222 2345679999999999999999999999999999999999999997643221 111111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMH-RVV 573 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~-evl 573 (583)
+. .+...+.++.+++.+||+.||++||++. +++
T Consensus 235 ~~---~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 PF---YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC---CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC---CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 01 1222346788999999999999999987 553
No 113
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=342.25 Aligned_cols=269 Identities=25% Similarity=0.388 Sum_probs=199.0
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHH--HHhCCCCceeeeeeeee-----CCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEI--LGSIKHRYLVNLRGYCN-----SPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~~~~ 378 (583)
.++|+..+.||+|+||.||+|.. +++.||||++..... ..+..|.++ +..++||||+++++.+. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 56788899999999999999976 689999999875332 334444444 55689999999998542 23356
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeeecCCCCCCeEecCCCcEEEeecC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC------SPRIIHRDIKSSNILLDGNLEARVSDFG 452 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~Dfg 452 (583)
++||||+++|+|.+++... ..++..+..++.||+.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 8999999999999999753 3589999999999999999999431 1199999999999999999999999999
Q ss_pred cccccCcCCc-------eeeeeecccccccccccccc-------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccc-
Q 007959 453 LAKLLEDEES-------HITTIVAGTFGYLAPEYMQS-------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL- 517 (583)
Q Consensus 453 l~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~- 517 (583)
++..+..... .......||+.|+|||++.+ ..++.++||||||+++|||++|..|+.........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987654321 11223569999999999876 45678999999999999999997775432211110
Q ss_pred h-H---------HHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 518 N-I---------VGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 518 ~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
. . ................+...+. .....+.++.+++.+||+.||++|||++|+++.|++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK-ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC-CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccc-cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 0 0 0011111111111222222211 234567789999999999999999999999999999875
No 114
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.3e-41 Score=344.61 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=204.0
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|..||+|.+... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888999999999999999875 5899999999653 2334467889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC---CcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~~~~~ 459 (583)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999999975 4569999999999999999999995 499999999999999854 4599999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... . ...... ... ....+
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---~---~~~i~~-~~~-~~~~~- 252 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---L---YAQIKA-GAY-DYPSP- 252 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHHH-TCC-CCCTT-
T ss_pred Ccc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---H---HHHHHh-CCC-CCCcc-
Confidence 322 234579999999999999899999999999999999999999997532211 1 111111 100 00011
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 253 ---~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 253 ---EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ---GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11233467899999999999999999999875
No 115
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=332.44 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=196.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh--------------------------hHHHHHHHHHHHH
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG--------------------------FDRFFERELEILG 358 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 358 (583)
.++|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467888999999999999999865 5889999998653211 1245889999999
Q ss_pred hCCCCceeeeeeeeeC--CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 007959 359 SIKHRYLVNLRGYCNS--PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSS 436 (583)
Q Consensus 359 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~ 436 (583)
+++||||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.||+.||+|||+ .+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 9999999999999976 567899999999999998764 3569999999999999999999995 49999999999
Q ss_pred CeEecCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCcchh
Q 007959 437 NILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGR---ATEKTDVYSFGVLVLEVLSGKRPTDASFI 513 (583)
Q Consensus 437 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~ 513 (583)
|||++.++.+||+|||++......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876544322 33457999999999987665 47889999999999999999999975322
Q ss_pred cccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 514 EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. ...... ...... .+. ....+.++.+++.+||+.||++|||++|+++
T Consensus 246 ~------~~~~~~-~~~~~~---~~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M------CLHSKI-KSQALE---FPD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H------HHHHHH-HHCCCC---CCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H------HHHHHH-hcccCC---CCC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111111 111110 011 1123467899999999999999999999864
No 116
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=347.75 Aligned_cols=250 Identities=28% Similarity=0.429 Sum_probs=203.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +++.||+|.+.+.. ....+.+.+|++++..++||||+++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467888999999999999999876 47899999986532 22346788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.++++. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999976 4569999999999999999999995 499999999999999999999999999998765432
Q ss_pred ceeeeeecccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||................ ..
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----~~-------- 235 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----TT-------- 235 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH----HC--------
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----hc--------
Confidence 2344679999999999864 458999999999999999999999997543222111111111 00
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPT-MHRVVQ 574 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt-~~evl~ 574 (583)
....+...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 -~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 -VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01122233467899999999999999998 666653
No 117
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=336.48 Aligned_cols=266 Identities=25% Similarity=0.375 Sum_probs=202.1
Q ss_pred HhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHh--CCCCceeeeeeeeeCC----Cce
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSP----TSK 378 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~ 378 (583)
..++|+..+.||+|+||.||+|... ++.||||++.... ...+..|.+++.. ++||||+++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3568999999999999999999886 8999999986432 2344555555554 4999999999998776 678
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCeEecCCCcEEEeecCc
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGL 453 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 453 (583)
++||||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+
T Consensus 111 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEeccCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 999999999999999965 36999999999999999999999431 22999999999999999999999999999
Q ss_pred ccccCcCCceee---eeeccccccccccccccCCCCcc------cchhhHHHHHHHHHhC----------CCCCCcchhc
Q 007959 454 AKLLEDEESHIT---TIVAGTFGYLAPEYMQSGRATEK------TDVYSFGVLVLEVLSG----------KRPTDASFIE 514 (583)
Q Consensus 454 ~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~il~elltg----------~~p~~~~~~~ 514 (583)
+........... ....||+.|+|||++.+...+.+ +||||||+++|||+|| +.||......
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 987654332221 24579999999999987766654 9999999999999999 5555432221
Q ss_pred ccchHHHHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 515 KGLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.. ..... ........ ..+..+. .....+.++.+++.+||+.||++|||++||++.|+++..+
T Consensus 269 ~~-~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 269 DP-SYEDM-REIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp SC-CHHHH-HHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC-chhhh-HHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 11 11111 11111111 1111111 1236678899999999999999999999999999998765
No 118
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.2e-41 Score=343.39 Aligned_cols=245 Identities=24% Similarity=0.317 Sum_probs=204.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +|+.||+|.+.+.. ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467888999999999999999876 58999999997532 22346788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999999763 569999999999999999999995 59999999999999999999999999999876543
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......... ..
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~-~~--------- 255 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSG-KV--------- 255 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHC-CC---------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHHHHHHcC-CC---------
Confidence 23457999999999999999999999999999999999999999754321 111111111 10
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPT-----MHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt-----~~evl~ 574 (583)
..+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112233467899999999999999998 777754
No 119
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-41 Score=347.92 Aligned_cols=269 Identities=23% Similarity=0.307 Sum_probs=212.4
Q ss_pred cCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC--ceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPT--SKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 382 (583)
+.|...+.||+|+||.||+|.... |+.||+|++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 467788999999999999998765 8999999997543 233567889999999999999999999987655 679999
Q ss_pred EcCCCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe----cCCCcEEEeecCcccc
Q 007959 383 DFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSDFGLAKL 456 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~~~ 456 (583)
||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997643 239999999999999999999995 499999999999999 7778899999999987
Q ss_pred cCcCCceeeeeecccccccccccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQS--------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
...... .....||..|+|||++.+ ..++.++||||||+++|||++|+.||......... .........
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~~ 241 (396)
T 4eut_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIIT 241 (396)
T ss_dssp CCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHHH
T ss_pred ccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHhc
Confidence 654332 233569999999999865 56788999999999999999999999653322111 111111111
Q ss_pred cccc---ccc------------cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 529 EDRQ---REI------------IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 529 ~~~~---~~~------------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.... ... ..+............+.+++.+||+.||++||+++|+++.+++++.+
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1100 000 00111234577888899999999999999999999999999998764
No 120
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.8e-41 Score=341.14 Aligned_cols=248 Identities=24% Similarity=0.372 Sum_probs=194.3
Q ss_pred hcCCCccceeeecCceEEEEEEE----cCCcEEEEEeecccc----hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM----DDGNVFALKRIDKLN----EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
.++|+..+.||+|+||.||++.. .++..||+|++.+.. ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788899999999999999987 478999999997642 2234567889999999999999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999999999976 4568999999999999999999995 49999999999999999999999999999764
Q ss_pred CcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... .
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~---~--- 238 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK------TIDKILKCK---L--- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHTC---C---
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC---C---
Confidence 43221 2234569999999999999999999999999999999999999997643221 111111110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~ 574 (583)
..+.....++.+++.+||+.||++|| ++.|+++
T Consensus 239 ----~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ----NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11223346789999999999999999 6677654
No 121
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.2e-41 Score=337.60 Aligned_cols=259 Identities=24% Similarity=0.368 Sum_probs=197.5
Q ss_pred HhcCCCccceeeecCceEEEEEEEcC----CcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc-
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS- 377 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 377 (583)
..++|...+.||+|+||.||+|.... +..||+|.+... .....+.+.+|++++++++||||+++++++.+...
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 34567788999999999999997653 458999998753 23345678999999999999999999999977553
Q ss_pred ----eEEEEEcCCCCchhhHhhh-----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEE
Q 007959 378 ----KLLIYDFLPGGSLDEALHE-----RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (583)
Q Consensus 378 ----~~lv~e~~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 448 (583)
.++||||+++|+|.+++.. ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 4899999999999999853 2356999999999999999999999 559999999999999999999999
Q ss_pred eecCcccccCcCCce-eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHH
Q 007959 449 SDFGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFL 526 (583)
Q Consensus 449 ~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 526 (583)
+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .. ...
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~---~~~ 262 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MY---DYL 262 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH---HHH
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HH---HHH
Confidence 999999876543322 1233457889999999999999999999999999999999 889986543221 11 111
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.... ....+...+..+.+++.+||+.||++|||+.++++.|++++.
T Consensus 263 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 263 LHGH---------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HTTC---------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCC---------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 011122344678999999999999999999999999999875
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-40 Score=346.50 Aligned_cols=264 Identities=20% Similarity=0.293 Sum_probs=203.2
Q ss_pred hcCCCccceeeec--CceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSG--GFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
..+|+..+.||+| +||.||++... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578889999999 99999999887 68999999997543 3345678899999999999999999999999999999
Q ss_pred EEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 381 IYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999764 3569999999999999999999995 4999999999999999999999999999875433
Q ss_pred CCce------eeeeecccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh---
Q 007959 460 EESH------ITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS--- 528 (583)
Q Consensus 460 ~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 528 (583)
.... ......||..|+|||++.+ ..++.++||||+||++|||++|+.||........ ..........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 258 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLL 258 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC---------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCccc
Confidence 2211 1122468999999999987 6799999999999999999999999975322211 0000000000
Q ss_pred -------------------ccccccc----------cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 -------------------EDRQREI----------IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 -------------------~~~~~~~----------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....... .+.............+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000000 000000122334567999999999999999999999974
No 123
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.1e-41 Score=333.53 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=206.0
Q ss_pred hcCCCccc-eeeecCceEEEEEEEc---CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 306 LETLDDDH-IIGSGGFGTVYKLAMD---DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 306 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
.++|...+ .||+|+||.||++... ++..||||.+.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 9999999999999653 36789999987542 23356799999999999999999999999 556789
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 99999999999999976 4569999999999999999999995 4999999999999999999999999999987765
Q ss_pred CCceee--eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhcccccccc
Q 007959 460 EESHIT--TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREII 536 (583)
Q Consensus 460 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (583)
...... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .... .....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~----~~~~~----- 237 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTAM----LEKGE----- 237 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHH----HHTTC-----
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH----HHcCC-----
Confidence 443322 22346788999999998889999999999999999999 999997643221 1111 11110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 537 DPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+...+..+.+++.+||+.||++|||+.++++.|++++..
T Consensus 238 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 238 ---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0112233456799999999999999999999999999988653
No 124
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.4e-41 Score=342.11 Aligned_cols=245 Identities=26% Similarity=0.405 Sum_probs=200.4
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
+.|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.++...++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477789999999999999986 568999999986432 233467889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9996 689999877677899999999999999999999954 9999999999999999999999999999866533
Q ss_pred eeeeeeccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
....||+.|+|||++. ...++.++||||||+++|||++|+.||...... .......... ....
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------~~~~~~~~~~-~~~~---- 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNE-SPAL---- 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCC----
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhcC-CCCC----
Confidence 2346899999999984 567899999999999999999999998653221 1111111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+..+.+++.+||+.||++|||++++++
T Consensus 274 ---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 274 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11223466889999999999999999999875
No 125
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.4e-41 Score=332.74 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=199.9
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC-CceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSP-TSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 384 (583)
.++|+..+.||+|+||.||++... |+.||+|.+.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467888999999999999999875 8899999987543 356789999999999999999999997554 578999999
Q ss_pred CCCCchhhHhhhcCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 385 LPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
+++++|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999976532 38999999999999999999995 499999999999999999999999999998654322
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 542 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (583)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... .. .... .. . ...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~---~~~~-~~-----~---~~~ 234 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV---PRVE-KG-----Y---KMD 234 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HH---HHHT-TT-----C---CCC
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHh-cC-----C---CCC
Confidence 22357889999999999999999999999999999998 999987543221 11 1111 10 0 011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 543 VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.+...+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 2233446789999999999999999999999999987654
No 126
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=342.08 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=188.9
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||.||++... +++.||+|++.... ..+.+.+|++++.+++||||+++++++.+....++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 456888899999999999999887 47899999987543 345688999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCcccccCcCC
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~~ 461 (583)
+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 130 VTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 999999999976 4569999999999999999999995 49999999999999975 8899999999998664332
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... .....+
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~--~~~~~~--- 273 (349)
T 2w4o_A 206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCE--YYFISP--- 273 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTC--CCCCTT---
T ss_pred --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCC--CccCCc---
Confidence 2234568999999999999999999999999999999999999996532211 0011111110 111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12234467889999999999999999999986
No 127
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.6e-41 Score=337.13 Aligned_cols=262 Identities=22% Similarity=0.345 Sum_probs=189.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch-hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999865 589999999875432 334678899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 384 FLPGGSLDEALHERS-----EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
|++ |+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 59999987542 458999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc--ccc---
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE--DRQ--- 532 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~--- 532 (583)
.... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||........... ........ ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL--IFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCSCCTTTCGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHhCCCChhHhhhh
Confidence 3322 1233468999999999876 4689999999999999999999999976433221111 01100000 000
Q ss_pred --ccccCCCC----CC---------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 533 --REIIDPNC----EG---------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 533 --~~~~~~~~----~~---------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.. .. .......++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 00 01123457899999999999999999999875
No 128
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=338.34 Aligned_cols=259 Identities=24% Similarity=0.335 Sum_probs=205.5
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeee----CCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN----SPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 380 (583)
.++|+..+.||+|+||.||++.. .+++.||+|++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788899999999999999987 568999999997766666778999999999999999999999986 3457889
Q ss_pred EEEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 381 IYDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
|+||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999763 56699999999999999999999954 9999999999999999999999999998765
Q ss_pred CcCCce--------eeeeeccccccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHH
Q 007959 458 EDEESH--------ITTIVAGTFGYLAPEYMQSGR---ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFL 526 (583)
Q Consensus 458 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 526 (583)
...... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||+....... ......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~--- 260 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALAV--- 260 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHHh---
Confidence 422110 012245799999999987543 68999999999999999999999965322211 111110
Q ss_pred hhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 527 ISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
.. ... .+ .....+.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 261 -~~-~~~---~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 -QN-QLS---IP----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -HC-C-----CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -hc-cCC---CC----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 01 000 00 11223467999999999999999999999999998764
No 129
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.8e-41 Score=342.44 Aligned_cols=244 Identities=22% Similarity=0.327 Sum_probs=200.8
Q ss_pred HhcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc---hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN---EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 379 (583)
..++|+..+.||+|+||.||++.... ++.||+|.+.+.. ....+.+..|.+++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 45789999999999999999998875 7899999997532 23346688899999988 8999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999999763 569999999999999999999995 4999999999999999999999999999986433
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .......... .
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~------- 238 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-V------- 238 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-C-------
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-C-------
Confidence 22 2234467999999999999999999999999999999999999999764322 1111111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
..+...+.++.+++.+||+.||++||++
T Consensus 239 --~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 239 --AYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1122344678999999999999999964
No 130
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=345.34 Aligned_cols=262 Identities=17% Similarity=0.236 Sum_probs=205.9
Q ss_pred cCCCccceeeecCceEEEEEEEcC---------CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceee----------
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD---------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVN---------- 367 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 367 (583)
++|+..+.||+|+||.||+|.... +..||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578888999999999999998764 789999998753 35788999999999999998
Q ss_pred -----eeeeeeC-CCceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 368 -----LRGYCNS-PTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 368 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
+++++.. ....++||||+ +++|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEE
Confidence 5666655 67889999999 99999999864 4679999999999999999999995 499999999999999
Q ss_pred cCCC--cEEEeecCcccccCcCCcee------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 007959 441 DGNL--EARVSDFGLAKLLEDEESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (583)
Q Consensus 441 ~~~~--~~kl~Dfgl~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 512 (583)
+.++ .+||+|||+++.+....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9988 89999999998765433211 133479999999999999999999999999999999999999997643
Q ss_pred hcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
.... .+....... . .......+... .....+.++.+++.+||+.||++|||++++++.|++++.+
T Consensus 273 ~~~~-~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 273 PNTE-DIMKQKQKF-V-DKPGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TCHH-HHHHHHHHH-H-HSCCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCHH-HHHHHHHhc-c-CChhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 2211 111111111 1 11111111110 0112236789999999999999999999999999998764
No 131
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.1e-40 Score=330.43 Aligned_cols=259 Identities=19% Similarity=0.343 Sum_probs=198.5
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|+..+.||+|+||.||++.. .+|..||+|++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46788899999999999999986 46899999998752 334456789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 382 YDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
|||+++++|.+++... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999752 4569999999999999999999995 499999999999999999999999999998665
Q ss_pred cCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... .......
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~~~~~~~--- 258 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIE-QCDYPPL--- 258 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHHHHH-TTCSCCC---
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHHHhh-cccCCCC---
Confidence 4322 223356899999999999999999999999999999999999998653211 111111111 1111100
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
.....+.++.+++.+||+.||++|||+.+|++.|+++.
T Consensus 259 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 259 ----PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp ----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11223467899999999999999999999999998864
No 132
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=342.86 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=198.7
Q ss_pred cCCCccceeeecCceEEEEEEEc----CCcEEEEEeecccchh-----------hHHHHHHHHHHHHhCCCCceeeeeee
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD----DGNVFALKRIDKLNEG-----------FDRFFERELEILGSIKHRYLVNLRGY 371 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 371 (583)
++|...+.||+|+||.||+|... ++..+|+|++...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46788899999999999999886 5778999998754321 12346678889999999999999999
Q ss_pred eeC----CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC--c
Q 007959 372 CNS----PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL--E 445 (583)
Q Consensus 372 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~ 445 (583)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+ .+|+||||||+|||++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCc
Confidence 877 77889999999 999999997644 79999999999999999999995 4999999999999999877 9
Q ss_pred EEEeecCcccccCcCCcee------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchH
Q 007959 446 ARVSDFGLAKLLEDEESHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI 519 (583)
Q Consensus 446 ~kl~Dfgl~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~ 519 (583)
+||+|||+++.+....... .....||..|+|||++.+..++.++||||||+++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 9999999998765432211 1335799999999999999999999999999999999999999964322111 0
Q ss_pred HHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 007959 520 VGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEI 580 (583)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~ 580 (583)
............... +..... ....+.++.+++.+||+.||++|||+++|++.|+++-
T Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 270 VQTAKTNLLDELPQS-VLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHTTTHH-HHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHhhcccccHH-HHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111111111100000 000000 0123467999999999999999999999999998753
No 133
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.9e-41 Score=339.93 Aligned_cols=257 Identities=28% Similarity=0.433 Sum_probs=205.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcE--EEEEeeccc-chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNV--FALKRIDKL-NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 380 (583)
.++|+..+.||+|+||.||++... ++.. +|+|.+... .....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 467888999999999999999865 4554 499988753 233446689999999999 89999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc
Q 007959 381 IYDFLPGGSLDEALHERS---------------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE 445 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 445 (583)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 999999999999997643 469999999999999999999995 49999999999999999999
Q ss_pred EEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHH
Q 007959 446 ARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLN 524 (583)
Q Consensus 446 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 524 (583)
+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYE 252 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HHH
Confidence 9999999997433221 1223457889999999998889999999999999999998 999997543211 111
Q ss_pred HHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 525 FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
... .. .. ...+...+..+.+++.+||+.||++|||++|+++.|++++.+
T Consensus 253 ~~~-~~-----~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 KLP-QG-----YR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HGG-GT-----CC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred Hhh-cC-----CC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111 11 00 011223346789999999999999999999999999998765
No 134
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=340.29 Aligned_cols=250 Identities=17% Similarity=0.192 Sum_probs=203.9
Q ss_pred hcCCCccceeeecCceEEEEE------EEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCC---CCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKL------AMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK---HRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 376 (583)
.++|...+.||+|+||.||+| ...++..||+|++.... ...+..|++++..++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 456888899999999999999 35568899999997543 456788888888887 999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhc----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC----------
Q 007959 377 SKLLIYDFLPGGSLDEALHER----SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---------- 442 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---------- 442 (583)
..++||||+++|+|.++++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 999999999999999999752 456999999999999999999999 459999999999999998
Q ss_pred -CCcEEEeecCcccccCcC-CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHH
Q 007959 443 -NLEARVSDFGLAKLLEDE-ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV 520 (583)
Q Consensus 443 -~~~~kl~Dfgl~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~ 520 (583)
++.+||+|||+++..... .........||+.|+|||++.+..++.++||||||+++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 899999999999765422 2333455679999999999999999999999999999999999999986432210
Q ss_pred HHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHhhhh
Q 007959 521 GWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDR-PTMHRVVQILESEIY 581 (583)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R-Pt~~evl~~L~~~~~ 581 (583)
......+ ...+ ....+.+++..|++.+|.+| |+++++.+.|++.+.
T Consensus 293 ---------~~~~~~~----~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 ---------CKPEGLF----RRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ---------EEECSCC----TTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ---------eeechhc----cccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0111111 1111 23567789999999999998 578888888887664
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.7e-41 Score=336.63 Aligned_cols=258 Identities=24% Similarity=0.364 Sum_probs=195.4
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce---
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK--- 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 378 (583)
.++|+..+.||+|+||.||++.. .+++.||+|++... .......+.+|++++.+++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688899999999999999986 56889999999753 223345788999999999999999999998665443
Q ss_pred -EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 379 -LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 379 -~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
++||||+++++|.++++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 899999999999999976 3569999999999999999999995 49999999999999999999999999999876
Q ss_pred CcCCce--eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 458 EDEESH--ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 458 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~~ 240 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPPS 240 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCCcc
Confidence 543322 2234568999999999999999999999999999999999999997643221 11111111100000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH-HHHHhh
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVV-QILESE 579 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl-~~L~~~ 579 (583)
......+.++.+++.+||+.||++||++.+++ +.+.+.
T Consensus 241 ------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 241 ------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00112346788999999999999999766554 444443
No 136
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-40 Score=336.30 Aligned_cols=250 Identities=21% Similarity=0.336 Sum_probs=180.4
Q ss_pred ccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeeeCCCceEEEEEcCCCC
Q 007959 311 DDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYDFLPGG 388 (583)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 388 (583)
..+.||+|+||.||++... +++.||||++.+. ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 3588999999999999876 5899999998653 3456788999999997 999999999999999999999999999
Q ss_pred chhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC---cEEEeecCcccccCcCCceee
Q 007959 389 SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARVSDFGLAKLLEDEESHIT 465 (583)
Q Consensus 389 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgl~~~~~~~~~~~~ 465 (583)
+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++....... ..
T Consensus 92 ~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~ 166 (325)
T 3kn6_A 92 ELFERIKK-KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PL 166 (325)
T ss_dssp BHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cc
Confidence 99999976 4679999999999999999999995 4999999999999998665 899999999986654332 22
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhccc-chHHHHHHHHhhccccccccCCCCCCCC
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG-LNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ........... .... .+. ....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~-~~~~--~~~---~~~~ 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK-KGDF--SFE---GEAW 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT-TTCC--CCC---SHHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH-cCCC--CCC---cccc
Confidence 345689999999999999999999999999999999999999976433211 11111111111 1100 000 0011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+.++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 234567899999999999999999998863
No 137
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=341.89 Aligned_cols=249 Identities=19% Similarity=0.343 Sum_probs=195.0
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCC--CceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIKH--RYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 382 (583)
+.|+..+.||+|+||.||++...+++.||+|++... .....+.+.+|++++.+++| |||+++++++.+....++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457788999999999999999989999999998643 33345678999999999986 99999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 89 e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 89 E-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp C-CCSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred e-CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 9 458899999976 4679999999999999999999995 4999999999999997 67899999999987654432
Q ss_pred e-eeeeecccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 463 H-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 463 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ...........
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~~ 237 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPN 237 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCTT
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHHhcCC
Confidence 2 2334679999999999865 67899999999999999999999999653211 11111111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. .. ..+.....++.+++.+||+.||++|||+.|+++
T Consensus 238 ~-~~-------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 238 H-EI-------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp S-CC-------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-cc-------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 0 00 111122356889999999999999999999975
No 138
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-40 Score=364.75 Aligned_cols=249 Identities=25% Similarity=0.413 Sum_probs=199.8
Q ss_pred ceeeecCceEEEEEEEc---CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcCCC
Q 007959 313 HIIGSGGFGTVYKLAMD---DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPG 387 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 387 (583)
+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|++++.+++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999664 45789999997543 2345789999999999999999999999975 458899999999
Q ss_pred CchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce--ee
Q 007959 388 GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH--IT 465 (583)
Q Consensus 388 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~--~~ 465 (583)
|+|.++++. ...+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+...... ..
T Consensus 454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 999999975 5679999999999999999999995 49999999999999999999999999999877544322 22
Q ss_pred eeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCC
Q 007959 466 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 466 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... .. .... ... ....+
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~---~~i~-~~~--------~~~~p 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT---AMLE-KGE--------RMGCP 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH---HHHH-TTC--------CCCCC
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHH-cCC--------CCCCC
Confidence 33456789999999999999999999999999999998 999997643321 11 1111 111 01112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
...+.++.+++.+||+.||++|||+++|++.|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 2344778999999999999999999999999998764
No 139
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-40 Score=329.59 Aligned_cols=246 Identities=29% Similarity=0.485 Sum_probs=200.9
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++.... +..||+|.+.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 5678889999999999999997764 6789999986532 22356789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999763 56999999999999999999999 5599999999999999999999999999986544322
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ....... . ..
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~---~----~~-- 225 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRV---E----FT-- 225 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHHT---C----CC--
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH------HHHHHhC---C----CC--
Confidence 2345689999999999999999999999999999999999999975432211 1111000 0 00
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+...+..+.+++.+||+.||++|||+.|+++
T Consensus 226 -~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 226 -FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11223467889999999999999999999986
No 140
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-40 Score=352.30 Aligned_cols=247 Identities=21% Similarity=0.405 Sum_probs=204.9
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|...+.||+|+||.||+|... +|+.||||.+..... .....+.+|+++++.++||||+++++++.+....++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 457888899999999999999876 689999999975322 2346789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999975 456999999999999999999999 5599999999999999999999999999998765432
Q ss_pred ceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||+...... ....... .. .
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~-~~----~---- 233 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT------LFKKICD-GI----F---- 233 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH------HHHHHHT-TC----C----
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH------HHHHHhc-CC----c----
Confidence 2234579999999999988765 789999999999999999999997643211 1111111 10 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+.....++.+++.+||+.||++|||++|+++
T Consensus 234 -~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 -YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 011223467889999999999999999999986
No 141
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.9e-40 Score=339.16 Aligned_cols=252 Identities=24% Similarity=0.327 Sum_probs=193.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|+..+.||+|+||.||++... +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457888999999999999999876 689999999975432 346788999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc--EEEeecCcccccCcCCc
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKLLEDEES 462 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~~~~~~~~ 462 (583)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~-~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 999999999976 4569999999999999999999995 59999999999999987665 9999999997543222
Q ss_pred eeeeeeccccccccccccccCCCCcc-cchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEK-TDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
......||+.|+|||++.+..++.+ +||||+|+++|+|++|+.||........ ............ ..+.
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~---~~~~---- 242 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRILSVK---YSIP---- 242 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHHHTTC---CCCC----
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhcCC---CCCC----
Confidence 2234569999999999988877655 8999999999999999999976433211 111111111110 0000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 243 -~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 243 -DDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 01123367889999999999999999999975
No 142
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=334.21 Aligned_cols=264 Identities=22% Similarity=0.313 Sum_probs=199.4
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++.... |+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 3578889999999999999998864 8999999886543 233567889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 82 e~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999998865 4669999999999999999999995 4999999999999999999999999999987654322
Q ss_pred eeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHH---------HHHhhcccc
Q 007959 463 HITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL---------NFLISEDRQ 532 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~ 532 (583)
......||..|+|||.+.+ ..++.++||||+|+++|+|++|+.||............... .........
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2234568999999999876 67899999999999999999999999764332211111000 000000000
Q ss_pred ccccCCCCCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 533 REIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 533 ~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.... ..+..+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 01234466889999999999999999999975
No 143
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7e-40 Score=334.09 Aligned_cols=269 Identities=25% Similarity=0.373 Sum_probs=210.6
Q ss_pred HHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHh--CCCCceeeeeeeeeCCC----
Q 007959 303 IKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSPT---- 376 (583)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---- 376 (583)
....++|+..+.||+|+||.||++.. +++.||+|.+... ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 33456899999999999999999988 4899999998653 24567788888887 79999999999998776
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCeEecCCCcEEEeec
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDF 451 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Df 451 (583)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 78999999999999999975 46999999999999999999999311 248999999999999999999999999
Q ss_pred CcccccCcCCcee---eeeeccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCcch
Q 007959 452 GLAKLLEDEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSG----------KRPTDASF 512 (583)
Q Consensus 452 gl~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg----------~~p~~~~~ 512 (583)
|++.......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| ..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9998765544321 2345699999999998765 234789999999999999999 67775432
Q ss_pred hcccchHHHHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 513 IEKGLNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
... .....+..... ... ..+..+. ........+.+++.+||+.||++|||+.||++.|+++..++
T Consensus 272 ~~~-~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 272 PSD-PSVEEMRKVVC-EQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CSS-CCHHHHHHHHT-TSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCc-ccHHHHHHHHH-HHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 211 11122222111 111 1122211 12466778999999999999999999999999999987653
No 144
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.5e-40 Score=327.04 Aligned_cols=250 Identities=22% Similarity=0.272 Sum_probs=203.5
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||.||+|.... +..||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 3467888999999999999998765 678999999876555567899999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCcCC
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999999999876 4569999999999999999999995 499999999999999 788999999999998765433
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
. .....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||........ ..... ..... ....
T Consensus 164 ~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~-~~~~~-~~~~--- 229 (277)
T 3f3z_A 164 M--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV------MLKIR-EGTFT-FPEK--- 229 (277)
T ss_dssp C--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHH-HCCCC-CCHH---
T ss_pred c--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH------HHHHH-hCCCC-CCch---
Confidence 2 234568999999998865 499999999999999999999999976432210 11110 10000 0000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+..+.+++.+|++.||++|||+.|+++
T Consensus 230 -~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 -DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00123467899999999999999999999975
No 145
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=338.86 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=196.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh-hHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG-FDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|...+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.+....++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888899999999999999876 6899999998753321 122455799999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
++ |+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 69999998877789999999999999999999995 4999999999999999999999999999986543322 2
Q ss_pred eeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc---ccccc----
Q 007959 465 TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR---QREII---- 536 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---- 536 (583)
.....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......... .+........ .....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH---FIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCChHhchhhhcchh
Confidence 233568999999999876 568999999999999999999999997643322111 1111110000 00000
Q ss_pred -----CCCCC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 537 -----DPNCE-----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 537 -----~~~~~-----~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+... ........++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 011123467889999999999999999999975
No 146
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-40 Score=329.52 Aligned_cols=246 Identities=22% Similarity=0.368 Sum_probs=181.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 457889999999999999999764 68999999987532 23356788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+ +++|.+.+.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 6788888865 4569999999999999999999995 499999999999999999999999999998665432
Q ss_pred ceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. .....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+...... ...... ...
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~-~~~--------- 228 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV------LFKNIS-NGV--------- 228 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HTC---------
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hCC---------
Confidence 2 233468999999999987765 789999999999999999999997643221 111111 110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+...+..+.+++.+|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0112223467889999999999999999999975
No 147
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.7e-41 Score=356.02 Aligned_cols=249 Identities=21% Similarity=0.336 Sum_probs=195.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +|+.||+|++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999865 5889999999753 223345678899999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999976 45799999999999999999999951 489999999999999999999999999998644332
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... .
T Consensus 304 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------~~~~i~~~~-~--------- 366 (446)
T 4ejn_A 304 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFELILMEE-I--------- 366 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCC-C---------
T ss_pred c-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHHHHhCC-C---------
Confidence 2 2344679999999999999999999999999999999999999997543221 111111111 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|| +++|+++
T Consensus 367 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 01223346789999999999999999 9999875
No 148
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4e-42 Score=344.46 Aligned_cols=265 Identities=25% Similarity=0.398 Sum_probs=189.8
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHh--CCCCceeeeeeeeeCCC----ceEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGS--IKHRYLVNLRGYCNSPT----SKLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 380 (583)
++|...+.||+|+||.||+|... ++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 56889999999999999999775 8899999987532 3557778888877 79999999999997766 7899
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-----SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
||||+++|+|.++++. ..+++..+..++.|++.||+|||... +.+|+||||||+|||++.++.+||+|||++.
T Consensus 79 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 9999999999999965 35888899999999999999999321 3499999999999999999999999999998
Q ss_pred ccCcCCcee---eeeeccccccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCcchhccc
Q 007959 456 LLEDEESHI---TTIVAGTFGYLAPEYMQSG------RATEKTDVYSFGVLVLEVLSG----------KRPTDASFIEKG 516 (583)
Q Consensus 456 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~il~elltg----------~~p~~~~~~~~~ 516 (583)
......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| ..||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 665443322 2334799999999998766 445789999999999999999 555543211100
Q ss_pred chHHHHHHHHhhccccccccCCCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 517 LNIVGWLNFLISEDRQREIIDPNCEG--VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
....... ...... ..+..+. ........+.+++.+||+.||++|||++||++.|+++..++
T Consensus 237 -~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 237 -SVEEMRK-VVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -CCC-CHH-HHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred -cHHHHHH-HHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 0000001 111111 1111111 12356678999999999999999999999999999887653
No 149
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1e-40 Score=338.27 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=204.5
Q ss_pred hcCCCccceeeecCceEEEEEEE------cCCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM------DDGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.++|+..+.||+|+||.||+|.. .++..||+|.+... .......+.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999974 35778999999643 334556789999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEe
Q 007959 379 LLIYDFLPGGSLDEALHERS------EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVS 449 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 449 (583)
++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998653 348999999999999999999995 49999999999999984 4569999
Q ss_pred ecCcccccCcCCc-eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHh
Q 007959 450 DFGLAKLLEDEES-HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLI 527 (583)
Q Consensus 450 Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 527 (583)
|||++........ .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHh
Confidence 9999986543322 12233567899999999999999999999999999999998 99998653221 1111111
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
.... ...+...+..+.+++.+||+.||++|||+.++++.|+....
T Consensus 260 ~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 SGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCC---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1110 11122334678999999999999999999999999987654
No 150
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-40 Score=344.67 Aligned_cols=249 Identities=18% Similarity=0.343 Sum_probs=196.0
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCC--CCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIK--HRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 382 (583)
..|+..+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458888999999999999999888999999998643 3344577999999999996 599999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
| +.+++|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 568899999976 457899999999999999999999 55999999999999996 57999999999987654432
Q ss_pred e-eeeeecccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 463 H-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 463 ~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~~~~ 284 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPN 284 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHCTT
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----HHHHHHHhCcc
Confidence 2 2344579999999999865 46899999999999999999999999653211 11111111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. ... .+.....++.+++.+||+.||++|||+.|+++
T Consensus 285 ~-----~~~---~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 285 H-----EIE---FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp S-----CCC---CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-----cCC---CCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 0 001 11112356889999999999999999999975
No 151
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1e-40 Score=367.24 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=208.5
Q ss_pred HhcCCCccceeeecCceEEEEEEEcC----CcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDD----GNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
..++|+..+.||+|+||.||+|.... +..||+|++... .....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34567788999999999999998753 457999988753 3344577999999999999999999999985 45689
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++|+|.++++.....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 9999999999999998766679999999999999999999995 4999999999999999999999999999987765
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
..........+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+ .. ........
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~---~~i~~~~~------- 610 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VI---GRIENGER------- 610 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH---HHHHHTCC-------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---HH---HHHHcCCC-------
Confidence 44333344567889999999999999999999999999999997 999997543221 11 11111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhcC
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYEK 583 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~~ 583 (583)
...+...+..+.+++.+||+.||++|||+.|+++.|++++.+|
T Consensus 611 --~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 611 --LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0112234467899999999999999999999999999988753
No 152
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.4e-40 Score=335.36 Aligned_cols=258 Identities=22% Similarity=0.299 Sum_probs=196.3
Q ss_pred cCCCc-cceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEE
Q 007959 307 ETLDD-DHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 307 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 383 (583)
+.|.. .+.||+|+||.||++... +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 34555 378999999999999854 6899999999766555567889999999985 79999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc---EEEeecCcccccCcC
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLAKLLEDE 460 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~~~~~~~ 460 (583)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999763 569999999999999999999995 49999999999999997766 999999999865432
Q ss_pred Cc------eeeeeecccccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch---------HH
Q 007959 461 ES------HITTIVAGTFGYLAPEYMQS-----GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN---------IV 520 (583)
Q Consensus 461 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~---------~~ 520 (583)
.. .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123469999999999875 568899999999999999999999997643221000 00
Q ss_pred HHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 521 GWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..... ...... ..... .....+.++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~-i~~~~~-~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFES-IQEGKY-EFPDK----DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHH-HHHCCC-CCCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHH-HhccCc-ccCch----hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00011 101000 00000 00123467899999999999999999999986
No 153
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-41 Score=345.23 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=204.1
Q ss_pred hcCCCccceeeecCceEEEEEEE----cCCcEEEEEeecccc----hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM----DDGNVFALKRIDKLN----EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 376 (583)
.++|+..+.||+|+||.||++.. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46788999999999999999987 368999999987532 22345577899999999 6999999999999999
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999763 569999999999999999999995 4999999999999999999999999999987
Q ss_pred cCcCCceeeeeecccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
.............||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~---- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE---- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC----
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC----
Confidence 65544444445679999999999985 3578999999999999999999999975432211 111111111110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQI 575 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~~ 575 (583)
...+......+.+++.+||+.||++|| +++|+++.
T Consensus 283 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 112233446788999999999999999 88888753
No 154
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-40 Score=356.49 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=205.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +|+.||+|++.+.. ......+.+|++++.+++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999876 68999999997532 22346688999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 382 YDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
|||+++|+|.+++.... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999997643 349999999999999999999995 49999999999999999999999999999876543
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......... .. .
T Consensus 340 ~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~-~~--~------- 405 (576)
T 2acx_A 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVK-EV--P------- 405 (576)
T ss_dssp CC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHH-HC--C-------
T ss_pred cc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhh-cc--c-------
Confidence 32 2345799999999999998999999999999999999999999976432211 111111111 10 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRP-----TMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RP-----t~~evl~ 574 (583)
...+...+.++.+++.+||+.||++|| +++||++
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 011223346789999999999999999 6777764
No 155
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.5e-40 Score=325.79 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=203.8
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... ++..||+|++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357888899999999999999875 5889999998653 2334467889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc---EEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl~~~~~~ 459 (583)
||+++++|.+.+.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999999999876 3569999999999999999999995 49999999999999986655 99999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ....... .. .....+.
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~-~~-~~~~~~~ 230 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKA-GA-YDYPSPE 230 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH-TC-CCCCTTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH------HHHHHHh-cc-ccCCchh
Confidence 332 233568999999999999999999999999999999999999996543221 1111111 10 0111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....+.++.+++.+|++.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 ----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1223467889999999999999999999976
No 156
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.7e-40 Score=328.46 Aligned_cols=243 Identities=21% Similarity=0.366 Sum_probs=198.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999886 6899999998753 233456788999999999 999999999999999999999
Q ss_pred EEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC---------------
Q 007959 382 YDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN--------------- 443 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--------------- 443 (583)
|||+++++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999764 2569999999999999999999995 499999999999999844
Q ss_pred ----CcEEEeecCcccccCcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccch
Q 007959 444 ----LEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (583)
Q Consensus 444 ----~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 518 (583)
..++|+|||.+........ ..||..|+|||.+.+. .++.++||||||+++|+|++|.+|+.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCC-----CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred cCCceEEEEcccccccccCCccc-----cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 4799999999987654332 3489999999998766 667899999999999999999987643211
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
+.. .... ..+..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 237 ---~~~--~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ---WHE--IRQG--------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---HHH--HHTT--------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHH--HHcC--------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 000 0111 111122233467899999999999999999999875
No 157
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-40 Score=338.57 Aligned_cols=259 Identities=23% Similarity=0.268 Sum_probs=200.8
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc-----chhhHHHHHHHHHHHHhCCCCceeeeeeeeeC
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-----NEGFDRFFERELEILGSIKHRYLVNLRGYCNS 374 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 374 (583)
++....++|+..+.||+|+||.||++... ++..||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34455677889999999999999999875 5789999998653 23345679999999999999999999999999
Q ss_pred CCceEEEEEcCCCCchhhHhhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 007959 375 PTSKLLIYDFLPGGSLDEALHER---------------------------------------SEQLDWDARLNIIMGAAK 415 (583)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~ 415 (583)
.+..++||||+++|+|.+++... ...+++..+..++.||+.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112357778899999999
Q ss_pred HHHHHhhcCCCCeeecCCCCCCeEecCCC--cEEEeecCcccccCcCCc---eeeeeecccccccccccccc--CCCCcc
Q 007959 416 GLAYLHHDCSPRIIHRDIKSSNILLDGNL--EARVSDFGLAKLLEDEES---HITTIVAGTFGYLAPEYMQS--GRATEK 488 (583)
Q Consensus 416 ~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgl~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~ 488 (583)
||+|||+ .+|+||||||+||+++.++ .+||+|||++..+..... .......||+.|+|||.+.+ ..++.+
T Consensus 180 ~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 9999995 4999999999999998766 899999999986643222 12344679999999999865 678999
Q ss_pred cchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 007959 489 TDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPT 568 (583)
Q Consensus 489 ~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt 568 (583)
+||||||+++|||++|+.||........ ......... ....+ .....+..+.+++.+||+.||++|||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~------~~~~~~~~~--~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADT------ISQVLNKKL--CFENP----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCC--CTTSG----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHH------HHHHHhccc--ccCCc----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999999999975432211 111111110 00000 11223467899999999999999999
Q ss_pred HHHHHH
Q 007959 569 MHRVVQ 574 (583)
Q Consensus 569 ~~evl~ 574 (583)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999976
No 158
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.4e-40 Score=331.25 Aligned_cols=258 Identities=26% Similarity=0.389 Sum_probs=199.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc--CCc--EEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD--DGN--VFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888899999999999999864 233 6899988753 2334567899999999999999999999998765 8
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++|+||+++++|.+++......+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 89999999999999998766779999999999999999999995 499999999999999999999999999998775
Q ss_pred cCCcee--eeeeccccccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 459 DEESHI--TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 459 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
...... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .......... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~-~~-- 243 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEG-ER-- 243 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSC-CC--
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccC-CC--
Confidence 543322 233457889999999998889999999999999999999 99999754322 1111111111 00
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
...+...+.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 244 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 244 -----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 01122344679999999999999999999999999988643
No 159
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-39 Score=329.71 Aligned_cols=251 Identities=26% Similarity=0.345 Sum_probs=204.1
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh------hHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 378 (583)
.+.|+..+.||+|+||.||++... +|..||+|.+...... ..+.+.+|++++.+++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 345788899999999999999876 5899999998753221 356799999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC----cEEEeecCcc
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLA 454 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~ 454 (583)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999975 4568999999999999999999995 4999999999999999887 7999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ......... .
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~---~ 235 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANITSVS---Y 235 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTC---C
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhcc---c
Confidence 87654322 233568999999999999999999999999999999999999997543221 111110000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+++ ......+..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDE---EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCH---HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccCh---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 001123366889999999999999999999986
No 160
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-39 Score=324.07 Aligned_cols=249 Identities=25% Similarity=0.367 Sum_probs=196.7
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
+.|...+.||+|+||.||++... ++..+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46778899999999999999875 58899999987543 23457789999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccC
Q 007959 385 LPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 385 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~ 458 (583)
+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998643 4679999999999999999999995 499999999999999 456889999999998665
Q ss_pred cCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.... .....||+.|+|||.+. ..++.++||||+|+++|||++|+.||........ .........
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~------~~~~~~~~~------- 242 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV------QQKATYKEP------- 242 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHCCC-------
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH------HhhhccCCc-------
Confidence 4322 23456899999999876 5789999999999999999999999976432211 111110100
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
............+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000011112366889999999999999999999975
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.2e-40 Score=325.18 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=204.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467888999999999999999876 68999999986432 3345778999999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc-
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES- 462 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 462 (583)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++........
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999999965 4569999999999999999999995 4999999999999999999999999999986643322
Q ss_pred eeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.......||..|+|||.+.+..+ +.++||||||+++|||++|+.||+...... .....+.. .. ...
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~----~~---~~~----- 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE----KK---TYL----- 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHHHT----TC---TTS-----
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHhhh----cc---ccc-----
Confidence 12234568999999999987765 789999999999999999999997643221 11111110 00 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
......+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011233467889999999999999999999875
No 162
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-39 Score=345.19 Aligned_cols=262 Identities=20% Similarity=0.254 Sum_probs=207.8
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCC-CceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKH-RYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|+..+.||+|+||.||++.. .+++.||||++..... ...+..|++++..++| +++..+..++...+..++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 5788899999999999999986 4689999998764332 2357889999999987 5555566666778888999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCcCC
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
+ +++|.+++......+++..++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 999999998767789999999999999999999995 499999999999999 588999999999998776543
Q ss_pred cee------eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 462 SHI------TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 462 ~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
... .....||..|+|||.+.+..++.++||||||+++|||++|+.||...........................
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence 221 22467999999999999999999999999999999999999999764332211111111111101100000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....+.++.+++.+||+.+|++||++++|++.|++++.+
T Consensus 241 --------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 241 --------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp --------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 011236789999999999999999999999999998764
No 163
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=336.06 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=188.7
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeee--------CCC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCN--------SPT 376 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~~ 376 (583)
.+|+..+.||+|+||.||++... +++.||+|++........+.+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46788899999999999999865 68999999997766666778999999999996 999999999983 344
Q ss_pred ceEEEEEcCCCCchhhHhhh--cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcc
Q 007959 377 SKLLIYDFLPGGSLDEALHE--RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 454 (583)
..++|+||++ |+|.+++.. ....+++..++.++.||+.||+|||+. .++|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 5789999995 799999865 245699999999999999999999954 223999999999999999999999999999
Q ss_pred cccCcCCcee-----------eeeecccccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHH
Q 007959 455 KLLEDEESHI-----------TTIVAGTFGYLAPEYM---QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV 520 (583)
Q Consensus 455 ~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~ 520 (583)
.......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---- 261 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI---- 261 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh----
Confidence 8765432211 1134589999999998 566789999999999999999999999965322110
Q ss_pred HHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 521 GWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
. ...... + ........+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 262 --~-----~~~~~~---~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 --V-----NGKYSI---P----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -----------CCC---C----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --h-----cCcccC---C----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 000000 0 011122447899999999999999999999999988764
No 164
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=331.94 Aligned_cols=260 Identities=25% Similarity=0.365 Sum_probs=198.2
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccc-----hhhHHHHHHHHHHHHhC---CCCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN-----EGFDRFFERELEILGSI---KHRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~ 376 (583)
.++|+..+.||+|+||+||+|.. .+++.||+|++.... ......+.+|+++++++ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 468999999986432 12234667788877766 4999999999987655
Q ss_pred -----ceEEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEee
Q 007959 377 -----SKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSD 450 (583)
Q Consensus 377 -----~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 450 (583)
..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEee
Confidence 4789999996 59999997653 349999999999999999999995 4899999999999999999999999
Q ss_pred cCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 451 FGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 451 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
||+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......... ..... .....
T Consensus 164 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~i~~-~~~~~ 238 (308)
T 3g33_A 164 FGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL--GKIFD-LIGLP 238 (308)
T ss_dssp CSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH--HHHHH-HHCCC
T ss_pred CccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHH-HhCCC
Confidence 999986653322 23457899999999999999999999999999999999999999764332111 11111 10000
Q ss_pred cc----------ccccCCCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQ----------REIIDPNCE----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~----------~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.. ...+.+... ...+....++.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 000000000 011233467889999999999999999999875
No 165
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-40 Score=339.93 Aligned_cols=261 Identities=20% Similarity=0.261 Sum_probs=201.8
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC-----CCceeeeeeeeeCCCce
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-----HRYLVNLRGYCNSPTSK 378 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~ 378 (583)
..++|...+.||+|+||.||++... +++.||||++... ....+.+..|++++..++ ||||+++++++...+..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 3567889999999999999999874 6889999998753 334566788999999986 99999999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---------------
Q 007959 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------------- 442 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------------- 442 (583)
++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 899999998653 459999999999999999999995 59999999999999975
Q ss_pred ----------CCcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 007959 443 ----------NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (583)
Q Consensus 443 ----------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 512 (583)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 7899999999998654322 23568999999999999999999999999999999999999997643
Q ss_pred hcccchHHHHH---------HHHhhccccccc----cCCCCCC--CC---------------HHHHHHHHHHHHHccccC
Q 007959 513 IEKGLNIVGWL---------NFLISEDRQREI----IDPNCEG--VQ---------------SESLDALLAVATQCVSSS 562 (583)
Q Consensus 513 ~~~~~~~~~~~---------~~~~~~~~~~~~----~~~~~~~--~~---------------~~~~~~l~~l~~~cl~~d 562 (583)
........... ............ ....++. .. ......+.+++.+||+.|
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 343 (360)
T 3llt_A 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343 (360)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCC
Confidence 22111111000 000000000000 0000000 00 001256789999999999
Q ss_pred CCCCCCHHHHHH
Q 007959 563 PDDRPTMHRVVQ 574 (583)
Q Consensus 563 p~~RPt~~evl~ 574 (583)
|++|||++|+++
T Consensus 344 P~~Rpta~elL~ 355 (360)
T 3llt_A 344 PTLRPSPAELLK 355 (360)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999874
No 166
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.2e-41 Score=330.50 Aligned_cols=256 Identities=24% Similarity=0.404 Sum_probs=202.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeee--CCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCN--SPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 380 (583)
.++|+..+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999876 6899999999753 3344567999999999999999999999874 4677899
Q ss_pred EEEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 381 IYDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDC--SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
||||+++++|.+++... ...+++..+..++.|++.||+|||+.. ..+++||||||+||+++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999764 334999999999999999999999651 0129999999999999999999999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||....... .. ... .....
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---~~i-~~~~~--- 233 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LA---GKI-REGKF--- 233 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH---HHH-HHTCC---
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HH---HHH-hhccc---
Confidence 7654322 1223468999999999999899999999999999999999999997643211 11 111 11111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 577 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~ 577 (583)
...+...+.++.+++.+||+.||++|||++|+++.+.
T Consensus 234 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 234 -----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1112234467899999999999999999999987653
No 167
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.6e-41 Score=343.57 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=194.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHH-HHhCCCCceeeeeeeeeCCCceEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEI-LGSIKHRYLVNLRGYCNSPTSKLL 380 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 380 (583)
.++|+..+.||+|+||.||++... ++..||+|++.+... .....+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467888999999999999999876 478999999975432 223456667766 567899999999999999999999
Q ss_pred EEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcC
Q 007959 381 IYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 381 v~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 460 (583)
||||+++|+|.++++. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999976 4568999999999999999999995 49999999999999999999999999999864332
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......... . .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~~~i~~~~-~--~----- 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDNILNKP-L--Q----- 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH------HHHHHHHSC-C--C-----
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHhcc-c--C-----
Confidence 2 22345679999999999999999999999999999999999999997643221 111111110 0 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQI 575 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~ 575 (583)
.+......+.+++.+||+.||++||++.+.++.
T Consensus 258 --~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 258 --LKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp --CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred --CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 112234678899999999999999998644433
No 168
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.2e-40 Score=331.00 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=201.8
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.++|...+.||+|+||.||++... +|+.||+|.+..........+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356788899999999999999876 6899999999865554556789999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCcCC
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
+++++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 88 VSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCCccHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 999999999976 3569999999999999999999995 499999999999999 788999999999997644321
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... . ..... .... ....
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~i~-~~~~-~~~~---- 228 (304)
T 2jam_A 164 ---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---L---FEKIK-EGYY-EFES---- 228 (304)
T ss_dssp ---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHH-HCCC-CCCT----
T ss_pred ---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---H---HHHHH-cCCC-CCCc----
Confidence 223468999999999999999999999999999999999999997532211 1 11111 1100 0001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
......+.++.+++.+|++.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112234467899999999999999999999975
No 169
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=338.01 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=201.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch--------hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--------GFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 376 (583)
.++|+..+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 467888999999999999999854 688999999875321 12345778999999999999999999999999
Q ss_pred ceEEEEEcCCCC-chhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 377 SKLLIYDFLPGG-SLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 377 ~~~lv~e~~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999777 99999976 4569999999999999999999995 499999999999999999999999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ...
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~~ 239 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VEA 239 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TTT
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------Hhh
Confidence 7654432 234569999999999988776 88999999999999999999999652111 000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQI 575 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~ 575 (583)
... .+...+.++.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~-----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 AIH-----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCC-----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccC-----CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 111134678999999999999999999999873
No 170
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.3e-40 Score=326.04 Aligned_cols=246 Identities=26% Similarity=0.436 Sum_probs=204.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++... ++..||+|.+.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467888999999999999999876 47789999986532 22346789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999764 56999999999999999999999 5599999999999999999999999999997654322
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||+...... ........ +..
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~-------~~~-- 230 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNV-------DLK-- 230 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTT-------CCC--
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhcc-------ccC--
Confidence 234568999999999999999999999999999999999999997543211 11111110 001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+...+..+.+++.+|++.||++|||++|+++
T Consensus 231 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 -FPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 12223467889999999999999999999985
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.7e-40 Score=348.24 Aligned_cols=260 Identities=20% Similarity=0.269 Sum_probs=194.0
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC------C
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------T 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 376 (583)
.++|+..+.||+|+||.||++... +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467888999999999999999765 5889999999754 334456788999999999999999999998654 3
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999975 5777664 348999999999999999999995 4999999999999999999999999999987
Q ss_pred cCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHH-HH-------------
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV-GW------------- 522 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~-~~------------- 522 (583)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+ ..
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 65432 234467999999999999999999999999999999999999999764322111000 00
Q ss_pred --HHHHhhcc------ccccccCCCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 523 --LNFLISED------RQREIIDPNC----EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 523 --~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
........ .....+.... .........++.+|+.+||+.||++|||++|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 0000000000 0011122567899999999999999999999875
No 172
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.9e-40 Score=329.19 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=200.4
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467888899999999999999886 4889999999766555667899999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++++|.+++......+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cc
Confidence 99999999998767789999999999999999999995 499999999999999999999999999876432211 11
Q ss_pred eeeecccccccccccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 465 TTIVAGTFGYLAPEYM-----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.....||..|+|||.+ .+..++.++||||||+++|+|++|+.||....... .......... ...
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~-~~~---- 242 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSDP-PTL---- 242 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCC-CCC----
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccCC-ccc----
Confidence 2234689999999988 35678999999999999999999999987543211 1111111110 000
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112233467899999999999999999999875
No 173
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.8e-40 Score=328.06 Aligned_cols=248 Identities=24% Similarity=0.408 Sum_probs=204.7
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|...+.||+|+||.||++...+ ++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 3567888999999999999998774 788999988653 233456788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999999999865 4579999999999999999999995 499999999999999999999999999998765332
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
. ......||..|+|||.+.+..++.++||||+|+++|+|++|+.||+.....+ ......... .
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~---~------- 232 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE---Y------- 232 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC---C-------
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhhcc---C-------
Confidence 2 2234568999999999999899999999999999999999999997643221 111111000 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+......+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111223467889999999999999999999876
No 174
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=327.02 Aligned_cols=251 Identities=24% Similarity=0.396 Sum_probs=198.8
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEcC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
+++.....||+|+||.||+|... ++..||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34555679999999999999864 58899999998766556678999999999999999999999999999999999999
Q ss_pred CCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC-CCcEEEeecCcccccCcCCc
Q 007959 386 PGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-NLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 386 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~~~ 462 (583)
++++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++. ++.+||+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999998653 346789999999999999999995 49999999999999987 89999999999987654322
Q ss_pred eeeeeeccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 463 HITTIVAGTFGYLAPEYMQSGR--ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
......|+..|+|||.+.+.. ++.++||||||+++|||++|+.||....... ........ .. ..+
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~--~~----~~~-- 245 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGM--FK----VHP-- 245 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHH--HC----CCC--
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhcc--cc----ccc--
Confidence 123456899999999987653 8899999999999999999999996432111 00000000 00 111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 246 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 246 -EIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122334467889999999999999999999875
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-40 Score=334.62 Aligned_cols=263 Identities=24% Similarity=0.338 Sum_probs=198.8
Q ss_pred HHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch-----hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 304 KKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
...++|+..+.||+|+||.||++... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34678999999999999999999876 589999999874322 123468899999999999999999999999999
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||+++ +|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999975 8999998767779999999999999999999995 49999999999999999999999999999876
Q ss_pred CcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc--
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE-- 534 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 534 (583)
..... ......||+.|+|||.+.+. .++.++||||||+++|||++|.+||........ +...... ........
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~-~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFET-LGTPTEEQWP 238 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHH-HCCCCTTTSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHH-cCCCChhhhh
Confidence 54332 23345689999999998654 589999999999999999999999876432211 1111110 00000000
Q ss_pred -------cc-CCCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 -------II-DPNCEGVQ-----SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 -------~~-~~~~~~~~-----~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+ ....+..+ .....++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00001111 233467999999999999999999999975
No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.1e-40 Score=324.85 Aligned_cols=250 Identities=26% Similarity=0.366 Sum_probs=200.6
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch------hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE------GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45778899999999999999887 589999999865321 13567999999999999999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC----cEEEeecCccc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL----EARVSDFGLAK 455 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~~ 455 (583)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999976 4569999999999999999999995 4999999999999998877 89999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ......... ..
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~---~~ 229 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVN---YD 229 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC---CC
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcc---cC
Confidence 7654322 233468999999999998999999999999999999999999997643221 111110000 00
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDE---EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCH---HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Ccc---hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 000 001122466889999999999999999999987
No 177
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-40 Score=349.04 Aligned_cols=193 Identities=25% Similarity=0.365 Sum_probs=153.7
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeC-----CCce
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS-----PTSK 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 378 (583)
++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57888999999999999999765 6899999999653 23345678899999999999999999999843 3568
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9999998 5799999865 4679999999999999999999995 499999999999999999999999999998764
Q ss_pred cCCc--------------------------eeeeeecccccccccccc-ccCCCCcccchhhHHHHHHHHHhC
Q 007959 459 DEES--------------------------HITTIVAGTFGYLAPEYM-QSGRATEKTDVYSFGVLVLEVLSG 504 (583)
Q Consensus 459 ~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg 504 (583)
.... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 3221 112345789999999976 566799999999999999999993
No 178
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-40 Score=339.81 Aligned_cols=261 Identities=25% Similarity=0.374 Sum_probs=190.5
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCC-CCceeeeeeeeeCCC--ce
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPT--SK 378 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~ 378 (583)
..++|+..+.||+|+||.||+|... +|+.||+|++... .......+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3578889999999999999999765 6899999998643 3334566788999999997 999999999997544 68
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 699999875 469999999999999999999995 599999999999999999999999999998654
Q ss_pred cCC--------------------ceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccc
Q 007959 459 DEE--------------------SHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL 517 (583)
Q Consensus 459 ~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~ 517 (583)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 311 112234579999999999876 67899999999999999999999999764322111
Q ss_pred hHHHHHHHHhhcccc---------------------ccccCCCCCCCC-------------HHHHHHHHHHHHHccccCC
Q 007959 518 NIVGWLNFLISEDRQ---------------------REIIDPNCEGVQ-------------SESLDALLAVATQCVSSSP 563 (583)
Q Consensus 518 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~-------------~~~~~~l~~l~~~cl~~dp 563 (583)
..+ .. ....... ............ .....++.+++.+||+.||
T Consensus 241 ~~i--~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 241 ERI--IG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHH--HH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHH--HH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 110 00 0000000 000000000000 0224578899999999999
Q ss_pred CCCCCHHHHHH
Q 007959 564 DDRPTMHRVVQ 574 (583)
Q Consensus 564 ~~RPt~~evl~ 574 (583)
++|||++|+++
T Consensus 318 ~~R~t~~e~l~ 328 (388)
T 3oz6_A 318 NKRISANDALK 328 (388)
T ss_dssp GGSCCHHHHTT
T ss_pred ccCCCHHHHhC
Confidence 99999999875
No 179
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.1e-40 Score=337.93 Aligned_cols=270 Identities=20% Similarity=0.249 Sum_probs=199.9
Q ss_pred HHHHHHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch-----------hhHHHHHHHHHHHHhCCCCceee
Q 007959 299 SKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE-----------GFDRFFERELEILGSIKHRYLVN 367 (583)
Q Consensus 299 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~ 367 (583)
..++....++|+..+.||+|+||.||+|...+|..||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 3566667789999999999999999999988899999999864221 12367899999999999999999
Q ss_pred eeeeeeC-----CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC
Q 007959 368 LRGYCNS-----PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (583)
Q Consensus 368 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 442 (583)
+++++.. ....++||||++ |+|.+.+......+++..+..++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcC
Confidence 9999843 345799999997 69999988766789999999999999999999995 49999999999999999
Q ss_pred CCcEEEeecCcccccCcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch-HH
Q 007959 443 NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN-IV 520 (583)
Q Consensus 443 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~-~~ 520 (583)
++.+||+|||++....... ......||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.......... +.
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999997544332 2234568999999999876 678999999999999999999999997643221110 00
Q ss_pred HHH---------H------HHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 521 GWL---------N------FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 521 ~~~---------~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... . ...............+..........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 000 0 00000000000000000111233467899999999999999999999975
No 180
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.8e-40 Score=337.28 Aligned_cols=262 Identities=23% Similarity=0.384 Sum_probs=202.9
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
++|+..+.||+|+||.||++... ++..||+|.+... .....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788899999999999999876 6889999998754 334457799999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++++|.++++. ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.++|+|||++.......
T Consensus 113 ~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 186 (360)
T 3eqc_A 113 MDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 186 (360)
T ss_dssp CTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence 999999999976 35699999999999999999999952 289999999999999999999999999997653321
Q ss_pred eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHH---------HH-H--------
Q 007959 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL---------NF-L-------- 526 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~---------~~-~-------- 526 (583)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............... .. .
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 23356899999999999999999999999999999999999999754322110000000 00 0
Q ss_pred --hhc-------cccccccCCCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 527 --ISE-------DRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 527 --~~~-------~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... .....+....... .....+.++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 0000000000000 11223467899999999999999999999975
No 181
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.9e-40 Score=326.02 Aligned_cols=246 Identities=27% Similarity=0.479 Sum_probs=203.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeC-----------
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS----------- 374 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------- 374 (583)
.+|+..+.||+|+||.||++... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 46788899999999999999886 78999999997643 246789999999999999999998754
Q ss_pred -----CCceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEE
Q 007959 375 -----PTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARV 448 (583)
Q Consensus 375 -----~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 448 (583)
....++||||+++|+|.++++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEE
Confidence 44578999999999999999764 4679999999999999999999995 49999999999999999999999
Q ss_pred eecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 449 SDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 449 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
+|||++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.... ...... .
T Consensus 164 ~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~~~~-~ 232 (284)
T 2a19_B 164 GDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--------KFFTDL-R 232 (284)
T ss_dssp CCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--------HHHHHH-H
T ss_pred Ccchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--------HHHHHh-h
Confidence 99999987654332 233468999999999999999999999999999999999998864311 011100 0
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
. ..+. ...+..+.+++.+||+.||++|||+.|+++.|+....
T Consensus 233 ~----~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 233 D----GIIS-------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp T----TCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred c----cccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 1 1111 1223568899999999999999999999999987643
No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.2e-40 Score=342.47 Aligned_cols=240 Identities=17% Similarity=0.208 Sum_probs=188.5
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeeccc---chhhHHHHHHHH---HHHHhCCCCceeeee-------ee
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKL---NEGFDRFFEREL---EILGSIKHRYLVNLR-------GY 371 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 371 (583)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677889999999999999986 46899999999742 334457799999 455566899999998 55
Q ss_pred eeCCC-----------------ceEEEEEcCCCCchhhHhhhcCC------CCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 007959 372 CNSPT-----------------SKLLIYDFLPGGSLDEALHERSE------QLDWDARLNIIMGAAKGLAYLHHDCSPRI 428 (583)
Q Consensus 372 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 428 (583)
+.+++ ..++||||+ +|+|.+++..... .+++..+..|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 55543 278999999 6899999986421 23468888999999999999995 499
Q ss_pred eecCCCCCCeEecCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccC-----------CCCcccchhhHHHH
Q 007959 429 IHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-----------RATEKTDVYSFGVL 497 (583)
Q Consensus 429 vH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~G~i 497 (583)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985432 2334567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 498 VLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 498 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
+|||++|+.||......... ..+.. ... ..+.++.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~---------------~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS---------------EWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS---------------GGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch---------------hhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999754322111 11111 111 22367889999999999999999999985
No 183
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.4e-40 Score=334.27 Aligned_cols=251 Identities=23% Similarity=0.347 Sum_probs=199.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||++... +++.||+|.+.+... ...+|++++.++ +||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456888899999999999999876 588999999976433 245688888887 79999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC----CcEEEeecCcccccCc
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKLLED 459 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~~~~~ 459 (583)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+..+ +.+||+|||++.....
T Consensus 97 ~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999976 4569999999999999999999995 499999999999998533 3599999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..........+. .... .... .+.
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~---~~i~-~~~~--~~~-- 243 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL---ARIG-SGKF--SLS-- 243 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH---HHHH-HCCC--CCC--
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH---HHHc-cCCc--ccC--
Confidence 432 233457899999999998888999999999999999999999999753222111111 1111 1110 011
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.......+.++.+++.+||+.||++|||+.|+++
T Consensus 244 -~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 244 -GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112334567899999999999999999999875
No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-39 Score=339.18 Aligned_cols=250 Identities=22% Similarity=0.330 Sum_probs=190.7
Q ss_pred hcCCCcc-ceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHH-hCCCCceeeeeeeeeC----CCce
Q 007959 306 LETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILG-SIKHRYLVNLRGYCNS----PTSK 378 (583)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~ 378 (583)
.++|... +.||+|+||+||++... +++.||||++... ..+.+|++++. ..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3455554 68999999999999876 5889999998642 34677888864 4589999999998865 5678
Q ss_pred EEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCcc
Q 007959 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLA 454 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~ 454 (583)
++||||+++|+|.+++.... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999998653 469999999999999999999995 49999999999999997 789999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccc-hHHHHHHHHhhccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQR 533 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 533 (583)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+. ... .
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~-~ 284 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ-Y 284 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC-C
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc-c
Confidence 8655332 223457899999999999999999999999999999999999999764332111 1111111 000 0
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....+. ....+.++.+++.+||+.||++|||+.|+++
T Consensus 285 ~~~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 285 EFPNPE----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCTTT----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCcc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011111 1233467899999999999999999999986
No 185
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.1e-40 Score=351.47 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=202.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|...+.||+|+||.||++... +|+.||+|++.+... .....+.+|++++++++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 356788899999999999999886 589999999975322 2346788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhc---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 382 YDFLPGGSLDEALHER---SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
|||+++|+|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999764 3469999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~-------- 409 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQA-------- 409 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCC--------
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcc--------
Confidence 44322 234579999999999999999999999999999999999999997643211 1111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
...+...+..+.+++.+||+.||++||++
T Consensus 410 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 410 --VTYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --cCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 01123344678899999999999999975
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-40 Score=336.46 Aligned_cols=258 Identities=25% Similarity=0.377 Sum_probs=194.8
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC------Cc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------TS 377 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 377 (583)
+.|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 56788899999999999999874 6899999999653 233456788999999999999999999998765 34
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||+ +++|.++++. ..+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 59999999 8899999975 569999999999999999999995 49999999999999999999999999999875
Q ss_pred CcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHH-H--------HHHHHh
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV-G--------WLNFLI 527 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~-~--------~~~~~~ 527 (583)
... .....+|..|+|||++.+ ..++.++||||+||+++||++|+.||...........+ . +.....
T Consensus 179 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 179 DSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp CSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 432 233568999999999877 68999999999999999999999999764322111100 0 000000
Q ss_pred hc------cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 528 SE------DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 528 ~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.. ..........+..........+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00 000001111111222334567899999999999999999999986
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.9e-40 Score=323.25 Aligned_cols=247 Identities=21% Similarity=0.372 Sum_probs=195.9
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
.++|...+.||+|+||.||++... +|+.||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 457888899999999999999886 68999999986532 22346788999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999763 5689999999999999999999965 99999999999999999999999999998765432
Q ss_pred ceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. .....|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+...... ...... ... .
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~~--~------ 228 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIR-GGV--F------ 228 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH-HCC--C------
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHHHhh-cCc--c------
Confidence 2 233468999999999987765 689999999999999999999997542211 111111 110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+......+.+++.+|++.||++|||+.|+++
T Consensus 229 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 011223467889999999999999999999986
No 188
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.3e-40 Score=334.03 Aligned_cols=248 Identities=24% Similarity=0.405 Sum_probs=204.7
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeeccc---chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKL---NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 381 (583)
..+|...+.||+|+||.||++...+ ++.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 3567788999999999999998764 789999998653 234456789999999999999999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999999999875 4579999999999999999999995 499999999999999999999999999998765332
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE 541 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (583)
. ......||..|+|||.+.+..++.++||||||+++|||++|+.||....... ......... ..
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~---~~------ 259 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE---YS------ 259 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC---CC------
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC---CC------
Confidence 2 2234568999999999999999999999999999999999999997643221 111111100 00
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 542 GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 542 ~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+......+.+++.+||+.||++|||++|+++
T Consensus 260 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 -IPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11223366889999999999999999999876
No 189
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.3e-40 Score=335.80 Aligned_cols=265 Identities=23% Similarity=0.340 Sum_probs=200.8
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeC--------
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNS-------- 374 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 374 (583)
..+|+..+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46788999999999999999987 468999999886432 2334578899999999999999999999876
Q ss_pred CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcc
Q 007959 375 PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (583)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 454 (583)
.+..++||||++ |+|.+.+......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 446899999997 48888887766779999999999999999999995 49999999999999999999999999999
Q ss_pred cccCcCC---ceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 455 KLLEDEE---SHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 455 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
+...... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......................
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 8765322 122234568999999998876 458999999999999999999999998643322111111100000000
Q ss_pred cccc-----------ccCCCCCCCCHH-----HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQRE-----------IIDPNCEGVQSE-----SLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~~~-----------~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.... ............ ....+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000000000000 1345889999999999999999999875
No 190
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=324.79 Aligned_cols=250 Identities=28% Similarity=0.423 Sum_probs=201.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEEc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDF 384 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 384 (583)
.+.|+..+.||+|+||.||+|... +|..||+|.+.... ..+.+.+|++++.+++||||+++++++......++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 457888999999999999999876 48999999987543 346788999999999999999999999999999999999
Q ss_pred CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCcee
Q 007959 385 LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI 464 (583)
Q Consensus 385 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 464 (583)
+++++|.+++......+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++........ .
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-K 181 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-C
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-c
Confidence 99999999998667789999999999999999999995 4999999999999999999999999999987654322 2
Q ss_pred eeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCC
Q 007959 465 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ 544 (583)
Q Consensus 465 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (583)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||........ .... ..... +.. ..+
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~-~~~~~-----~~~-~~~ 248 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA------IFMI-PTNPP-----PTF-RKP 248 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHH-HHSCC-----CCC-SSG
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH------HHHH-hcCCC-----ccc-CCc
Confidence 2345689999999999999999999999999999999999999975322110 0100 01100 000 012
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 545 SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 545 ~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+..+.+++.+||+.||++|||+.++++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 233467899999999999999999999975
No 191
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.8e-40 Score=342.43 Aligned_cols=253 Identities=10% Similarity=0.001 Sum_probs=182.6
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHHHHhC--CCCceeeee-------eeee
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSI--KHRYLVNLR-------GYCN 373 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 373 (583)
.+|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45778899999999999999875 689999999986432 3345677885544444 699988754 3433
Q ss_pred CC-----------------CceEEEEEcCCCCchhhHhhhcCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCCeee
Q 007959 374 SP-----------------TSKLLIYDFLPGGSLDEALHERSEQLDWDAR------LNIIMGAAKGLAYLHHDCSPRIIH 430 (583)
Q Consensus 374 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivH 430 (583)
.. ...++||||++ |+|.+++......+++..+ ..++.||+.||+|||+ .+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 22 33799999998 8999999876555666667 7888999999999995 49999
Q ss_pred cCCCCCCeEecCCCcEEEeecCcccccCcCCceeeeeecccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCC
Q 007959 431 RDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPT 508 (583)
Q Consensus 431 ~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~ 508 (583)
|||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999866432 223457799999999987 67999999999999999999999999
Q ss_pred CcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 509 DASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
............ ..............+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSWK---RPSLRVPGTDSLAFG----SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCCC---BCCTTSCCCCSCCCT----TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccchh---hhhhhhccccccchh----hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 765322110000 000000000000111 11234567899999999999999999999864
No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.8e-40 Score=327.26 Aligned_cols=249 Identities=28% Similarity=0.433 Sum_probs=205.1
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356788899999999999999765 68899999986543 3345779999999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCce
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESH 463 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 463 (583)
|+++++|.+++.. ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++........
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999999964 569999999999999999999995 4999999999999999999999999999987654332
Q ss_pred eeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCC
Q 007959 464 ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV 543 (583)
Q Consensus 464 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (583)
......||..|+|||.+.+..++.++||||||+++|+|++|+.||....... .. .. ..... . ...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---~~-~~~~~-~-------~~~ 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---VL---FL-IPKNN-P-------PTL 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH---HH-HHHSC-C-------CCC
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---HH---HH-hhcCC-C-------CCC
Confidence 2234568999999999999999999999999999999999999987532211 11 11 11111 0 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 007959 544 QSESLDALLAVATQCVSSSPDDRPTMHRVVQI 575 (583)
Q Consensus 544 ~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~ 575 (583)
....+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22234678999999999999999999999863
No 193
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.1e-40 Score=333.98 Aligned_cols=264 Identities=20% Similarity=0.290 Sum_probs=193.7
Q ss_pred HHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch--hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceE
Q 007959 303 IKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 379 (583)
....++|+..+.||+|+||+||++... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345678999999999999999999765 688999999975432 23456789999999999999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-----CCCcEEEeecCcc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-----GNLEARVSDFGLA 454 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfgl~ 454 (583)
+||||++ |+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||++
T Consensus 110 lv~e~~~-~~L~~~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCS-EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCC-CCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997 599999976 4569999999999999999999995 4999999999999994 5556999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc--c
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED--R 531 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 531 (583)
+....... ......||..|+|||++.+. .++.++||||+|+++|||++|+.||........ +........... .
T Consensus 185 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTT
T ss_pred cccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHHHHHHhCCCchhh
Confidence 87653322 22345689999999998774 589999999999999999999999976432211 111111000000 0
Q ss_pred ccc-c----cCCCCC---C------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 532 QRE-I----IDPNCE---G------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 532 ~~~-~----~~~~~~---~------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... . .....+ . .......++.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0 000000 0 00113467889999999999999999999975
No 194
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-39 Score=332.09 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=203.1
Q ss_pred HHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--------hhhHHHHHHHHHHHHhC-CCCceeeeeeeee
Q 007959 304 KKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--------EGFDRFFERELEILGSI-KHRYLVNLRGYCN 373 (583)
Q Consensus 304 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 373 (583)
...++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567888999999999999999886 69999999886432 12245688999999999 7999999999999
Q ss_pred CCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCc
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGL 453 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 453 (583)
.....++||||+++++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 99999999999999999999975 4569999999999999999999995 4999999999999999999999999999
Q ss_pred ccccCcCCceeeeeecccccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHh
Q 007959 454 AKLLEDEESHITTIVAGTFGYLAPEYMQS------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLI 527 (583)
Q Consensus 454 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 527 (583)
+........ .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ......
T Consensus 247 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~ 318 (365)
T 2y7j_A 247 SCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIM 318 (365)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH
T ss_pred ccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHH
Confidence 987654332 234579999999998863 358899999999999999999999996532211 111111
Q ss_pred hccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 528 SEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. .... ...+.+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 319 ~-~~~~-~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 E-GQYQ-FSSPEW----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp H-TCCC-CCHHHH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h-CCCC-CCCccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 0000 000000 112356889999999999999999999986
No 195
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7e-39 Score=318.95 Aligned_cols=247 Identities=24% Similarity=0.377 Sum_probs=195.9
Q ss_pred CCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeC----CCceEEE
Q 007959 309 LDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKLLI 381 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 381 (583)
|...+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 566778999999999999875 5788999998653 33445678999999999999999999998754 4557899
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEeecCcccccCcC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~ 460 (583)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. ..+++||||||+||+++ .++.+||+|||++......
T Consensus 108 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEecCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999999976 35699999999999999999999954 22399999999999998 7899999999999765433
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. .....||+.|+|||.+. +.++.++||||+|+++|+|++|+.||...... .......... .....
T Consensus 186 ~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~-~~~~~----- 250 (290)
T 1t4h_A 186 F---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRVTSG-VKPAS----- 250 (290)
T ss_dssp S---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHHTTT-CCCGG-----
T ss_pred c---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHHHHHHhcc-CCccc-----
Confidence 2 23456899999999886 46999999999999999999999999653221 1111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 --FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11122356899999999999999999999975
No 196
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.2e-40 Score=342.93 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=191.0
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch--------hhHHHHHHHHHHHHhCCCCceeeeeeeeeCC
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--------GFDRFFERELEILGSIKHRYLVNLRGYCNSP 375 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 375 (583)
..++|...+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3568889999999999999999775 578999999865321 112347899999999999999999999865
Q ss_pred CceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC---CcEEEeecC
Q 007959 376 TSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFG 452 (583)
Q Consensus 376 ~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 452 (583)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ ..+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecc
Confidence 457899999999999999875 4679999999999999999999995 499999999999999754 459999999
Q ss_pred cccccCcCCceeeeeecccccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc
Q 007959 453 LAKLLEDEESHITTIVAGTFGYLAPEYMQS---GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (583)
Q Consensus 453 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (583)
+++...... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ....... .
T Consensus 288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i~----~ 359 (419)
T 3i6u_A 288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----S 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHHH----T
T ss_pred cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHHh----c
Confidence 998765432 2344679999999999853 578899999999999999999999997532221 1111111 0
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.... . .+......+..+.+++.+||+.||++|||++|+++
T Consensus 360 ~~~~-~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 GKYN-F----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TCCC-C----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-C----CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0000 0 00001123467899999999999999999999886
No 197
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4e-39 Score=338.78 Aligned_cols=199 Identities=25% Similarity=0.365 Sum_probs=166.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC-----Cc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TS 377 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 377 (583)
.++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999875 5788999999753 233456789999999999999999999998765 57
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||++ |+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 699999975 4669999999999999999999995 49999999999999999999999999999876
Q ss_pred CcCCce---------------------eeeeecccccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 007959 458 EDEESH---------------------ITTIVAGTFGYLAPEYM-QSGRATEKTDVYSFGVLVLEVLSGKRPTD 509 (583)
Q Consensus 458 ~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~il~elltg~~p~~ 509 (583)
...... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 543211 12456799999999986 56679999999999999999998665554
No 198
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.2e-40 Score=330.55 Aligned_cols=257 Identities=24% Similarity=0.379 Sum_probs=185.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
.++|+..+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468889999999999999999754 68899999986532 2335678899999999999999999999999999999999
Q ss_pred cCCCCchhhHhhh-------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 384 FLPGGSLDEALHE-------RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 384 ~~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
|+++++|.+++.. ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999974 24559999999999999999999995 4999999999999999999999999999986
Q ss_pred cCcCCc----eeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc
Q 007959 457 LEDEES----HITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR 531 (583)
Q Consensus 457 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 531 (583)
...... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ . ........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~---~~~~~~~~ 244 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---L---MLTLQNDP 244 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---H---HHHHTSSC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH---H---HHHhccCC
Confidence 653321 11234568999999999876 5789999999999999999999999976432211 0 00111100
Q ss_pred c---ccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 532 Q---REIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 532 ~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. ....+. ......+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 000010 111233467889999999999999999999986
No 199
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.6e-40 Score=333.34 Aligned_cols=264 Identities=23% Similarity=0.397 Sum_probs=199.7
Q ss_pred hcCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++.... |+.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 5678889999999999999998764 8999999986532 334566889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999888887654 4569999999999999999999995 4999999999999999999999999999986654322
Q ss_pred eeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHH---------HHHHHhhcccc
Q 007959 463 HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG---------WLNFLISEDRQ 532 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~ 532 (583)
......||..|+|||.+.+. .++.++||||+|+++|||++|+.||............. +..........
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 22345689999999998775 78999999999999999999999997643221110000 00000000000
Q ss_pred ccccCCCCCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 533 REIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 533 ~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.... ..+..+..+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1111111110 11234567999999999999999999998875
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.1e-39 Score=324.66 Aligned_cols=251 Identities=23% Similarity=0.377 Sum_probs=186.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|+.||+|++.... ....+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467888999999999999999874 68999999997542 222334555555688899999999999999999999999
Q ss_pred EcCCCCchhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
||++ |+|.+++.. ....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 588888764 356799999999999999999999953 2899999999999999999999999999987654
Q ss_pred CCceeeeeecccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 460 EESHITTIVAGTFGYLAPEYM----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
... .....||+.|+|||.+ .+..++.++||||+|+++|||++|+.||+..... ... ......... ...
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~~~-~~~ 234 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----FQQ-LKQVVEEPS-PQL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----HHH-HHHHHHSCC-CCC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch----HHH-HHHHhccCC-CCc
Confidence 322 2334689999999996 5567899999999999999999999999742211 111 111111110 000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+|++.||++|||++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 -------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11223467899999999999999999999986
No 201
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-39 Score=329.10 Aligned_cols=251 Identities=20% Similarity=0.307 Sum_probs=198.3
Q ss_pred cCCCcc-ceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEE
Q 007959 307 ETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 307 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 381 (583)
+.|... +.||+|+||.||++... +++.||+|.+.... ......+.+|+.++..+ +||||+++++++.+....++|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 344444 88999999999999876 58999999987533 23356789999999999 469999999999999999999
Q ss_pred EEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCccccc
Q 007959 382 YDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKLL 457 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~ 457 (583)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++..
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~ 184 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence 9999999999998653 4669999999999999999999995 49999999999999987 789999999999876
Q ss_pred CcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
..... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ..... .. ......
T Consensus 185 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~i~-~~-~~~~~~ 254 (327)
T 3lm5_A 185 GHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET------YLNIS-QV-NVDYSE 254 (327)
T ss_dssp -----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHH-HT-CCCCCT
T ss_pred CCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH------HHHHH-hc-ccccCc
Confidence 54322 2335699999999999999999999999999999999999999976432211 00000 00 000111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.........+.+++.+||+.||++|||++|+++
T Consensus 255 ----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 255 ----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 112234467889999999999999999999875
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-39 Score=333.84 Aligned_cols=257 Identities=21% Similarity=0.337 Sum_probs=203.8
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhh-----------------HHHHHHHHHHHHhCCCCceeee
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGF-----------------DRFFERELEILGSIKHRYLVNL 368 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 368 (583)
.++|+..+.||+|+||.||++.. ++..||+|.+....... .+.+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999998 89999999987532211 1789999999999999999999
Q ss_pred eeeeeCCCceEEEEEcCCCCchhhH------hhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec
Q 007959 369 RGYCNSPTSKLLIYDFLPGGSLDEA------LHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD 441 (583)
Q Consensus 369 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 441 (583)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+|||+ ..+++||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 9999999999999999999999998 6543 4679999999999999999999995 15999999999999999
Q ss_pred CCCcEEEeecCcccccCcCCceeeeeeccccccccccccccC-CCCc-ccchhhHHHHHHHHHhCCCCCCcchhcccchH
Q 007959 442 GNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATE-KTDVYSFGVLVLEVLSGKRPTDASFIEKGLNI 519 (583)
Q Consensus 442 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~ 519 (583)
.++.++|+|||++...... ......|+..|+|||.+.+. .++. ++||||||+++|||++|+.||...... ...
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VEL 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHH
Confidence 9999999999999876443 23445689999999999877 6666 999999999999999999999754321 111
Q ss_pred HHHHHHHhhccccccc------cCCC----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 520 VGWLNFLISEDRQREI------IDPN----CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 520 ~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....... ..... ..+. ........+.++.+++.+||+.||++|||+.|+++
T Consensus 262 ---~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 ---FNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111 00000 0000 00011334567899999999999999999999986
No 203
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-39 Score=344.63 Aligned_cols=250 Identities=25% Similarity=0.365 Sum_probs=201.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.+.|+..+.||+|+||+||++... +++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356888999999999999999876 68999999986432 234567899999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec---CCCcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD---GNLEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgl~~~~~~ 459 (583)
||+++|+|.+.+... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++ .++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999998763 569999999999999999999995 4999999999999995 566799999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
.. ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||....... ......... .. ...+
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~-~~-~~~~- 244 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGK-YA-FDLP- 244 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-CC-SCSG-
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-CC-CCCc-
Confidence 32 2234579999999999875 59999999999999999999999997643221 111111110 00 0000
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ---~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 245 ---QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ---GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11233467889999999999999999999986
No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-39 Score=358.67 Aligned_cols=244 Identities=22% Similarity=0.334 Sum_probs=202.2
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc---chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL---NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 379 (583)
..++|+..+.||+|+||.||++... +++.||||++.+. .....+.+..|.+++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4678899999999999999999876 5788999999753 223346678899999987 7999999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+||||+++|+|.++++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999999864 569999999999999999999995 4999999999999999999999999999986443
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 495 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~--------- 558 (674)
T 3pfq_A 495 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE------LFQSIMEHN--------- 558 (674)
T ss_dssp TTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHSSC---------
T ss_pred CCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH------HHHHHHhCC---------
Confidence 322 2345679999999999999999999999999999999999999997643221 111111110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTM 569 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~ 569 (583)
...+...+.++.+|+.+||+.||++||++
T Consensus 559 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 -VAYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 11223345778999999999999999997
No 205
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-39 Score=324.65 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=200.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|+.||+|++.... ......+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 467888999999999999999876 68999999986532 223467889999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 383 DFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
||++ ++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 69999997653 568999999999999999999995 499999999999999999999999999998664332
Q ss_pred ceeeeeeccccccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc-------cc
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGR-ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR-------QR 533 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 533 (583)
. ......+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||........ ............. ..
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 R-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp B-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGS
T ss_pred c-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcC
Confidence 1 122346899999999987765 79999999999999999999999976432211 1111111000000 00
Q ss_pred cccCCCCCC--------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 534 EIIDPNCEG--------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 534 ~~~~~~~~~--------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
....+..+. .....+.++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000011100 01123467899999999999999999999986
No 206
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.1e-39 Score=344.75 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=197.5
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 383 (583)
+.|+..+.||+|+||+||++... ++..||+|.+.+.. ......+.+|+.+++.++||||+++++++.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45778899999999999999876 68899999987542 2335678999999999999999999999999999999999
Q ss_pred cCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCcccccCcC
Q 007959 384 FLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 384 ~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~ 460 (583)
|+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIH-RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999999999876 3569999999999999999999995 49999999999999975 455999999999876543
Q ss_pred CceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCC
Q 007959 461 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC 540 (583)
Q Consensus 461 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (583)
. ......||+.|+|||++. ..++.++||||+|+++|+|++|+.||....... ......... . ....+.+
T Consensus 193 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~-~-~~~~~~~ 261 (494)
T 3lij_A 193 K--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE------ILRKVEKGK-Y-TFDSPEW 261 (494)
T ss_dssp B--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC-C-CCCSGGG
T ss_pred c--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCC-C-CCCchhc
Confidence 3 233456999999999886 579999999999999999999999997643221 111111110 0 0011111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 541 EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...+..+.+++.+||+.||++|||+.|+++
T Consensus 262 ----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 ----KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 123467889999999999999999999874
No 207
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=330.34 Aligned_cols=258 Identities=25% Similarity=0.376 Sum_probs=200.1
Q ss_pred HhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
..++|+..+.||+|+||.||+|...+ .+|+|.+.... ....+.+.+|+.++++++||||+++++++.+....++|+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 45678889999999999999998764 48999886432 223355778999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++ ++.++|+|||++........
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999998766679999999999999999999995 4999999999999998 67999999999876532211
Q ss_pred ----eeeeeecccccccccccccc---------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc
Q 007959 463 ----HITTIVAGTFGYLAPEYMQS---------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (583)
Q Consensus 463 ----~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (583)
.......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..... ..
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~-~~ 257 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA------IIWQM-GT 257 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH------HHHHH-HT
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHh-cc
Confidence 11223458999999999864 457899999999999999999999997543221 11111 11
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhc
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIYE 582 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~~ 582 (583)
....... ....+.++.+++.+||+.||++|||+.++++.|+++..+
T Consensus 258 ~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLS-------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCC-------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCC-------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111 111235688999999999999999999999999987654
No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.8e-39 Score=325.69 Aligned_cols=255 Identities=16% Similarity=0.267 Sum_probs=197.5
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeeeC--CCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNS--PTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 382 (583)
++|+..+.||+|+||.||++.. .+++.||+|.+.... .+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5688889999999999999976 468999999987533 467889999999997 9999999999987 66789999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC-cEEEeecCcccccCcCC
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-EARVSDFGLAKLLEDEE 461 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~~ 461 (583)
||+++++|.++++. +++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999999854 8999999999999999999995 4999999999999999766 89999999998765433
Q ss_pred ceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHH--------hhccc-
Q 007959 462 SHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFL--------ISEDR- 531 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~- 531 (583)
. .....|+..|+|||.+.+ ..++.++||||+|+++|||++|+.||........ .+....... .....
T Consensus 186 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 186 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH-HHHHHHHHHCHHHHHHHHHHTTC
T ss_pred c--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH-HHHHHHHhcCCchhhhHHHHhcc
Confidence 2 234568999999999877 6789999999999999999999999854221100 000000000 00000
Q ss_pred -------------cccccCCCC-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 532 -------------QREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 532 -------------~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
......... .........++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 0011224577999999999999999999999986
No 209
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2e-39 Score=346.62 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=203.1
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
+.|+..+.||+|+||.||++... +|+.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46788899999999999999876 68999999986432 334577999999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe---cCCCcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL---DGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgl~~~~~~ 459 (583)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++.....
T Consensus 106 e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHT-CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999976 4569999999999999999999995 499999999999999 5678999999999987654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||....... . ...... .... ...+
T Consensus 182 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~---~~~i~~-~~~~-~~~~- 249 (484)
T 3nyv_A 182 SKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD---I---LKKVEK-GKYT-FELP- 249 (484)
T ss_dssp CCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHHHHH-CCCC-CCSG-
T ss_pred ccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH---H---HHHHHc-CCCC-CCCc-
Confidence 332 233569999999999875 69999999999999999999999997643221 1 111111 1000 0000
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 250 ---~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 250 ---QWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11234467899999999999999999999975
No 210
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-38 Score=327.60 Aligned_cols=259 Identities=22% Similarity=0.380 Sum_probs=199.6
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC-----CceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 379 (583)
.+|+..+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++.+++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 46888999999999999999865 57889999997533 33446789999999999999999999998654 4689
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
+|+||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 107 iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 9999996 599999865 459999999999999999999995 4999999999999999999999999999987654
Q ss_pred CCcee--eeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccc-----
Q 007959 460 EESHI--TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDR----- 531 (583)
Q Consensus 460 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 531 (583)
..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...........+ .. ......
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i--~~-~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI--LG-ILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH--HH-HHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH--HH-HhCCCCHHHHH
Confidence 33221 234579999999998654 45899999999999999999999999764332211111 00 000000
Q ss_pred ----------cccccCCCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 532 ----------QREIIDPNC---EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 532 ----------~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
......... .........++.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 0011223467899999999999999999999975
No 211
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.1e-39 Score=334.56 Aligned_cols=260 Identities=22% Similarity=0.263 Sum_probs=200.1
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC--------CCceeeeeeeee----
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK--------HRYLVNLRGYCN---- 373 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---- 373 (583)
++|+..+.||+|+||.||+|... +++.||+|++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 57888999999999999999765 5789999999754 334567889999999885 788999999987
Q ss_pred CCCceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC--------
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL-------- 444 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-------- 444 (583)
.....++||||+ ++++.+.+... ...+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 567789999999 55666666543 467999999999999999999999532 899999999999999775
Q ss_pred -----------------------------------------cEEEeecCcccccCcCCceeeeeeccccccccccccccC
Q 007959 445 -----------------------------------------EARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG 483 (583)
Q Consensus 445 -----------------------------------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 483 (583)
.+||+|||++...... .....||..|+|||++.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTS
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCC
Confidence 7999999999876543 2234689999999999999
Q ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHH---HHhhc---------cccccccCC----------C--
Q 007959 484 RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN---FLISE---------DRQREIIDP----------N-- 539 (583)
Q Consensus 484 ~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~---------~~~~~~~~~----------~-- 539 (583)
.++.++|||||||++|||+||+.||................ ..... ......+.. .
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 99999999999999999999999997643322111111110 00000 000000000 0
Q ss_pred --------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 540 --------CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 540 --------~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...........+.+|+.+||+.||++|||++|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01134667788999999999999999999999985
No 212
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.4e-39 Score=320.05 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=193.6
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeC----------
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS---------- 374 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 374 (583)
.++|+..+.||+|+||.||+|... +++.||+|.+... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 356788899999999999999875 6899999999653 3345678999999999999999999998754
Q ss_pred ---CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeec
Q 007959 375 ---PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDF 451 (583)
Q Consensus 375 ---~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 451 (583)
....++||||+++|+|.++++.....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 4567899999999999999987666789999999999999999999954 9999999999999999999999999
Q ss_pred CcccccCcCC-------------ceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccc
Q 007959 452 GLAKLLEDEE-------------SHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL 517 (583)
Q Consensus 452 gl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~ 517 (583)
|++....... ........||..|+|||.+.+. .++.++||||||+++|||++ ||......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~--- 234 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER--- 234 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---
Confidence 9998764321 1112345689999999998764 78999999999999999998 55432111
Q ss_pred hHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 518 NIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
......... ....+.+ ......+..+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 --VNILKKLRS---VSIEFPP---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp --HHHHHHHHS---TTCCCCT---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --HHHHHhccc---cccccCc---cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111110 0011111 123344567889999999999999999999986
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.9e-39 Score=320.22 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=203.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc---------hhhHHHHHHHHHHHHhCC-CCceeeeeeeeeC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN---------EGFDRFFERELEILGSIK-HRYLVNLRGYCNS 374 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 374 (583)
.++|+..+.||+|+||.||++... +|+.||+|.+.... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 578889999999999999999876 58899999986432 123456889999999995 9999999999999
Q ss_pred CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcc
Q 007959 375 PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLA 454 (583)
Q Consensus 375 ~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 454 (583)
....++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999999976 4579999999999999999999995 49999999999999999999999999999
Q ss_pred cccCcCCceeeeeeccccccccccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQ------SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||....... .......
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~ 243 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMS 243 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhc
Confidence 87654332 23456899999999885 4568899999999999999999999996532211 1111111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.. . ....+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~-~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GN-Y-QFGSP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TC-C-CCCTT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CC-c-ccCcc----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 10 0 00001 11234567999999999999999999999975
No 214
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.7e-39 Score=331.06 Aligned_cols=251 Identities=24% Similarity=0.397 Sum_probs=197.1
Q ss_pred hcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccc-hhhHHHHHHHHHH-HHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLN-EGFDRFFERELEI-LGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+..|..+ ++.++||||+++++++.+.+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45677889999999999999986 468999999997542 2234455556655 77889999999999999999999999
Q ss_pred EcCCCCchhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 459 (583)
||+++ +|.+++.. ....+++..+..++.||+.||+|||+. .+|+||||||+||+++.++.+||+|||++.....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 99998864 356799999999999999999999953 3899999999999999999999999999987643
Q ss_pred CCceeeeeeccccccccccccc----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 460 EESHITTIVAGTFGYLAPEYMQ----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
.. ......||+.|+|||++. ...++.++||||||+++|||+||+.||+..... . ...........
T Consensus 207 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~----~-~~~~~~~~~~~---- 275 (340)
T 3an0_A 207 SV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----F-QQLKQVVEEPS---- 275 (340)
T ss_dssp HH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----H-HHHHHHHHSCC----
T ss_pred cc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch----H-HHHHHHhcCCC----
Confidence 22 122346899999999964 347899999999999999999999999753211 0 11111111110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
+.. .....+.++.+++.+||+.||++|||+.|+++
T Consensus 276 --~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 --PQL--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --CCC--CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCC--CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 000 11223567999999999999999999999976
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1e-39 Score=335.54 Aligned_cols=255 Identities=25% Similarity=0.364 Sum_probs=181.4
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC------Cc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------TS 377 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 377 (583)
++|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 57888899999999999999754 6889999998653 233456788999999999999999999998654 56
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++|+|++ +++|.++++. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 79999999 7899999865 569999999999999999999995 59999999999999999999999999999865
Q ss_pred CcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc-------
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE------- 529 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 529 (583)
... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||...........+ .. ....
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i--~~-~~g~p~~~~~~ 255 (367)
T 2fst_X 183 ADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI--LR-LVGTPGAELLK 255 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HH-HHCSCCHHHHT
T ss_pred ccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HH-HhCCCCHHHHH
Confidence 432 234578999999999876 67899999999999999999999999764322111100 00 0000
Q ss_pred ----c-------ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 530 ----D-------RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 530 ----~-------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
. .........+..........+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 00000000000011123466889999999999999999999975
No 216
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.1e-39 Score=343.36 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=199.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch-------------hhHHHHHHHHHHHHhCCCCceeeeeee
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-------------GFDRFFERELEILGSIKHRYLVNLRGY 371 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 371 (583)
.+.|...+.||+|+||+||++... ++..||+|.+..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999876 478999999875321 234678999999999999999999999
Q ss_pred eeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC---cEEE
Q 007959 372 CNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL---EARV 448 (583)
Q Consensus 372 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl 448 (583)
+.+....++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEE
Confidence 9999999999999999999999976 4569999999999999999999995 4999999999999998765 6999
Q ss_pred eecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 449 SDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 449 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
+|||++........ .....||+.|+|||++. +.++.++||||+|+++|+|++|+.||....... .......
T Consensus 191 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~ 261 (504)
T 3q5i_A 191 VDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------IIKKVEK 261 (504)
T ss_dssp CCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH
T ss_pred EECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 99999987654432 23456999999999987 469999999999999999999999997643221 1111111
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... .++. ......+.++.+++.+||+.||.+|||++|+++
T Consensus 262 -~~~--~~~~---~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 262 -GKY--YFDF---NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -CCC--CCCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCC--CCCc---cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 100 0000 000123467899999999999999999999875
No 217
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-38 Score=334.27 Aligned_cols=197 Identities=23% Similarity=0.296 Sum_probs=171.2
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhC------CCCceeeeeeeeeCCCceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI------KHRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~~ 379 (583)
.+|+..+.||+|+||.||+|... +++.||||++... ....+.+.+|++++..+ +|+||+++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 46888899999999999999766 4889999999753 33456778888888876 5779999999999999999
Q ss_pred EEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc--EEEeecCcccc
Q 007959 380 LIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKL 456 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~~ 456 (583)
+||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||++..
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 69999997653 4599999999999999999999965 9999999999999998887 99999999976
Q ss_pred cCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 512 (583)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 5432 223578999999999999999999999999999999999999997643
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=320.69 Aligned_cols=249 Identities=18% Similarity=0.296 Sum_probs=197.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc----hhhHHHHHHHHHHHHhCCCCceeeeeeee--eCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN----EGFDRFFERELEILGSIKHRYLVNLRGYC--NSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 378 (583)
.++|...+.||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 467899999999999999999875 58899999997532 23457799999999999999999999998 445678
Q ss_pred EEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 379 LLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
++||||++++ |.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77777653 4569999999999999999999995 49999999999999999999999999999876
Q ss_pred CcCC-ceeeeeeccccccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 458 EDEE-SHITTIVAGTFGYLAPEYMQSGR--ATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 458 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
.... ........||..|+|||.+.+.. ++.++||||||+++|||++|+.||+..... ....... ... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~-~~~--~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KLFENIG-KGS--Y 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHH-HCC--C
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHHh-cCC--C
Confidence 5322 22233456899999999987644 478999999999999999999999764221 1111111 110 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+......+.+++.+|++.||++|||+.|+++
T Consensus 231 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 -------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp -------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011223467889999999999999999999986
No 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7e-39 Score=330.37 Aligned_cols=260 Identities=20% Similarity=0.272 Sum_probs=191.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC------
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPT------ 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 376 (583)
.++|+..+.||+|+||.||++... +++.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 457888999999999999999765 5889999998753 3334567889999999999999999999987654
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..++||||++ |+|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 6799999996 58888885 358999999999999999999995 4999999999999999999999999999986
Q ss_pred cCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHH---------H------
Q 007959 457 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV---------G------ 521 (583)
Q Consensus 457 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~---------~------ 521 (583)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...........+ .
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 54322 223457899999999999999999999999999999999999999764321110000 0
Q ss_pred -HHHHHhhccc------c----ccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 522 -WLNFLISEDR------Q----REIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 522 -~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.......... . .....+............+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000000 0 000000000011233677999999999999999999999986
No 220
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-39 Score=332.85 Aligned_cols=258 Identities=22% Similarity=0.340 Sum_probs=194.9
Q ss_pred HhcCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeC---------
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS--------- 374 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 374 (583)
..++|+..+.||+|+||.||+|.. .+|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 456788999999999999999976 4689999999875432 23469999999999999999999843
Q ss_pred -----------------------------CCceEEEEEcCCCCchhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhh
Q 007959 375 -----------------------------PTSKLLIYDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHH 422 (583)
Q Consensus 375 -----------------------------~~~~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~ 422 (583)
....++||||++ |+|.+.+.. ....+++..+..++.||++||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH- 158 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH- 158 (383)
T ss_dssp -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 334789999997 588887764 3567999999999999999999999
Q ss_pred cCCCCeeecCCCCCCeEec-CCCcEEEeecCcccccCcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHH
Q 007959 423 DCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLE 500 (583)
Q Consensus 423 ~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~e 500 (583)
+.+|+||||||+|||++ .++.+||+|||+++....... .....||..|+|||.+.+. .++.++||||+|+++||
T Consensus 159 --~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 159 --SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp --TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred --HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 56999999999999997 689999999999987654432 2335689999999998765 58999999999999999
Q ss_pred HHhCCCCCCcchhcccchHHHHHHHHhh---------ccccccccCCCCCC------CCHHHHHHHHHHHHHccccCCCC
Q 007959 501 VLSGKRPTDASFIEKGLNIVGWLNFLIS---------EDRQREIIDPNCEG------VQSESLDALLAVATQCVSSSPDD 565 (583)
Q Consensus 501 lltg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dp~~ 565 (583)
|++|+.||......+. +.......-. ........-+.... .+...+.++.+++.+||+.||++
T Consensus 235 ll~g~~pf~~~~~~~~--~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQ--LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHhCCCCCCCCChHHH--HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999976432211 1111110000 00000000000000 22234567899999999999999
Q ss_pred CCCHHHHHH
Q 007959 566 RPTMHRVVQ 574 (583)
Q Consensus 566 RPt~~evl~ 574 (583)
|||+.|+++
T Consensus 313 R~t~~e~l~ 321 (383)
T 3eb0_A 313 RINPYEAMA 321 (383)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhc
Confidence 999999974
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=322.05 Aligned_cols=251 Identities=23% Similarity=0.386 Sum_probs=195.2
Q ss_pred HhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeC------CC
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNS------PT 376 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~ 376 (583)
..+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +||||+++++++.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 4567888999999999999999874 68999999987543 2356788999999998 89999999999866 46
Q ss_pred ceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 377 SKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
..++||||+++|+|.+++... ...+++..+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 789999999999999999764 3579999999999999999999995 499999999999999999999999999998
Q ss_pred ccCcCCceeeeeeccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
....... ......||..|+|||.+. +..++.++||||||+++|+|++|+.||........ ... ....
T Consensus 178 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~-~~~~ 249 (326)
T 2x7f_A 178 QLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------LFL-IPRN 249 (326)
T ss_dssp --------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHH-HHHS
T ss_pred ecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------HHH-hhcC
Confidence 6653321 223456899999999986 56789999999999999999999999965322111 011 1111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...... ....+..+.+++.+||+.||++|||++++++
T Consensus 250 ~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 250 PAPRLK-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCCCS-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccCC-------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111 1223467899999999999999999999986
No 222
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-38 Score=328.10 Aligned_cols=200 Identities=23% Similarity=0.323 Sum_probs=172.1
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CC-----ceeeeeeeeeCCCce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HR-----YLVNLRGYCNSPTSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~ 378 (583)
.++|+..+.||+|+||+||+|... +++.||||++... ......+..|++++..++ |+ +++++.+++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 568889999999999999999876 5789999999753 334566788999888875 44 499999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec--CCCcEEEeecCccc
Q 007959 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD--GNLEARVSDFGLAK 455 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl~~ 455 (583)
++||||++ |+|.+++.... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999996 59999998653 5699999999999999999999954 46899999999999995 57889999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcch
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF 512 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~ 512 (583)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 76533 223568999999999999999999999999999999999999998643
No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-38 Score=324.27 Aligned_cols=259 Identities=20% Similarity=0.324 Sum_probs=201.1
Q ss_pred cCCCccceeeecCceEEEEEEE--cCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC------ceeeeeeeeeCCCce
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM--DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR------YLVNLRGYCNSPTSK 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~~ 378 (583)
++|+..+.||+|+||.||++.. .+++.||+|++... ....+.+.+|++++..++|+ +++++++++.+.+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4788889999999999999986 36889999998754 33456788999999988765 499999999999999
Q ss_pred EEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---------------
Q 007959 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG--------------- 442 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------------- 442 (583)
++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 889999997653 368999999999999999999995 49999999999999987
Q ss_pred ----CCcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch
Q 007959 443 ----NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (583)
Q Consensus 443 ----~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 518 (583)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 244 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred ccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 6689999999998654322 23568999999999999999999999999999999999999997643322111
Q ss_pred HHHHHHH-----Hhhcccccccc---------------------CC--CCCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 007959 519 IVGWLNF-----LISEDRQREII---------------------DP--NCEGVQSESLDALLAVATQCVSSSPDDRPTMH 570 (583)
Q Consensus 519 ~~~~~~~-----~~~~~~~~~~~---------------------~~--~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~ 570 (583)
....... ..........+ .+ ...........++.+++.+||+.||++|||++
T Consensus 245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 324 (339)
T 1z57_A 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324 (339)
T ss_dssp HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence 1110000 00000000000 00 00112345567899999999999999999999
Q ss_pred HHHH
Q 007959 571 RVVQ 574 (583)
Q Consensus 571 evl~ 574 (583)
|+++
T Consensus 325 ell~ 328 (339)
T 1z57_A 325 EALK 328 (339)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 224
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=327.27 Aligned_cols=260 Identities=22% Similarity=0.339 Sum_probs=193.0
Q ss_pred cCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeee------------
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCN------------ 373 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 373 (583)
.+|+..+.||+|+||.||+|.... ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 467788999999999999998875 8999999998766666778999999999999999999999873
Q ss_pred --CCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEee
Q 007959 374 --SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSD 450 (583)
Q Consensus 374 --~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~D 450 (583)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467799999997 699999964 568999999999999999999995 4999999999999997 577999999
Q ss_pred cCcccccCcCCce--eeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHh
Q 007959 451 FGLAKLLEDEESH--ITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLI 527 (583)
Q Consensus 451 fgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 527 (583)
||+++........ ......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~~~~~~~ 242 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ--LILESIP 242 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHSC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcC
Confidence 9999876533221 1233457899999998865 678999999999999999999999997643221100 0000000
Q ss_pred --hccc-----------ccc-ccCCC--CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 528 --SEDR-----------QRE-IIDPN--CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 528 --~~~~-----------~~~-~~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.... ... ...+. +.......+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000 000 00000 00011223567899999999999999999999976
No 225
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.8e-39 Score=325.93 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=195.3
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch--------hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--------GFDRFFERELEILGSIKHRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 376 (583)
.++|...+.||+|+||.||++... +++.||||.+..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 356888999999999999999876 478999999865321 12345889999999999999999999987665
Q ss_pred ceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc---EEEeecCc
Q 007959 377 SKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFGL 453 (583)
Q Consensus 377 ~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl 453 (583)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 8999999999999999975 4579999999999999999999995 49999999999999986654 99999999
Q ss_pred ccccCcCCceeeeeeccccccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcc
Q 007959 454 AKLLEDEESHITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISED 530 (583)
Q Consensus 454 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 530 (583)
+....... ......||+.|+|||++. ...++.++||||||+++|+|++|+.||....... .+..... ..
T Consensus 164 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~ 235 (322)
T 2ycf_A 164 SKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SG 235 (322)
T ss_dssp CEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HT
T ss_pred ceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hC
Confidence 98765432 122356899999999874 4678999999999999999999999997543221 1111111 00
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 531 RQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... . .+......+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~-~----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYN-F----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCC-C----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc-c----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000 0 00001123467899999999999999999999874
No 226
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.9e-39 Score=333.95 Aligned_cols=257 Identities=22% Similarity=0.315 Sum_probs=192.8
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc------eEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------KLL 380 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~l 380 (583)
.+|+..+.||+|+||.||+|...++..||+|++...... ..+|+++++.++||||+++++++..... .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468888999999999999999988888999988654322 3469999999999999999999854332 789
Q ss_pred EEEcCCCCchhhHhh--hcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEeecCccccc
Q 007959 381 IYDFLPGGSLDEALH--ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLAKLL 457 (583)
Q Consensus 381 v~e~~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~ 457 (583)
||||++++.+....+ .....+++..+..++.||++||+|||+ .+|+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999997644333322 225679999999999999999999995 4999999999999999 7999999999999876
Q ss_pred CcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHH----------
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFL---------- 526 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~---------- 526 (583)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||........ +.......
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHH
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHh
Confidence 54332 2345689999999998764 589999999999999999999999976432211 11111100
Q ss_pred hhccccccccCCCCC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 527 ISEDRQREIIDPNCE-----GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 527 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.........+..... ......+.++.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000000000000 011224567999999999999999999999975
No 227
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.5e-39 Score=323.84 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=200.0
Q ss_pred HhcCCCccceeeecCceEEEEEEE--cCCcEEEEEeecccch--hhHHHHHHHHHHHHhC---CCCceeeeeeeee----
Q 007959 305 KLETLDDDHIIGSGGFGTVYKLAM--DDGNVFALKRIDKLNE--GFDRFFERELEILGSI---KHRYLVNLRGYCN---- 373 (583)
Q Consensus 305 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 373 (583)
..++|+..+.||+|+||.||++.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346788999999999999999987 4688999999864322 2233566777777665 8999999999986
Q ss_pred -CCCceEEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeec
Q 007959 374 -SPTSKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDF 451 (583)
Q Consensus 374 -~~~~~~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 451 (583)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecC
Confidence 5677899999997 69999997653 459999999999999999999995 49999999999999999999999999
Q ss_pred CcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh---
Q 007959 452 GLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS--- 528 (583)
Q Consensus 452 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 528 (583)
|++....... ......||..|+|||.+.+..++.++||||||+++|||++|+.||........ +.........
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCG
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHHHcCCCCc
Confidence 9998665332 12345689999999999999999999999999999999999999976432211 0111100000
Q ss_pred cccc------ccccC----CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 EDRQ------REIID----PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ~~~~------~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.... ...+. ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000 0011122334567889999999999999999999984
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.3e-39 Score=328.11 Aligned_cols=260 Identities=21% Similarity=0.324 Sum_probs=198.1
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC-----Cce
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSP-----TSK 378 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 378 (583)
.++|+..+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357888899999999999999876 58899999997533 33456788999999999999999999987654 678
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 699999875 469999999999999999999995 499999999999999999999999999998765
Q ss_pred cCCcee---------eeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 459 DEESHI---------TTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 459 ~~~~~~---------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
...... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......... .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhC
Confidence 332111 123468999999998754 678999999999999999999999997643221110 0000000
Q ss_pred ccc-------------------cccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 EDR-------------------QREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ~~~-------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... ................+.++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000000000011234467889999999999999999999986
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.3e-38 Score=328.45 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=194.4
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCce-----
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSK----- 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 378 (583)
++|...+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+.+++.++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 46778899999999999999865 5899999999753 333456788999999999999999999999877655
Q ss_pred -EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 379 -LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 379 -~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
++||||++ ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999997 68888874 449999999999999999999995 49999999999999999999999999999865
Q ss_pred CcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh--------
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS-------- 528 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 528 (583)
... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......... .......-.
T Consensus 195 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL--TQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCCCCHHHHTT
T ss_pred ccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCcHHHHHH
Confidence 432 233568999999999877 68999999999999999999999999764322110 000000000
Q ss_pred ------ccccccccCCC---CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 ------EDRQREIIDPN---CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ------~~~~~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
........... ...........+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000000000 00011223567899999999999999999999875
No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=323.90 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=195.9
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc--chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc------
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL--NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS------ 377 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 377 (583)
++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46778899999999999999875 5899999999653 23345678899999999999999999999977654
Q ss_pred eEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 378 KLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999997 69988874 349999999999999999999995 49999999999999999999999999999865
Q ss_pred CcCCceeeeeecccccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc-------
Q 007959 458 EDEESHITTIVAGTFGYLAPEYMQS-GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE------- 529 (583)
Q Consensus 458 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 529 (583)
... .....||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......... ..... ....
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--~~i~~-~~~~~~~~~~~ 249 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL--TQILK-VTGVPGTEFVQ 249 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHH--HHHHH-HHCBCCHHHHT
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHH-HhCCCCHHHHH
Confidence 432 233568999999999876 67899999999999999999999999764322110 00000 0000
Q ss_pred -----------cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 530 -----------DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 530 -----------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..........+.......+.++.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000011111222233345678999999999999999999999975
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.6e-39 Score=329.88 Aligned_cols=269 Identities=19% Similarity=0.260 Sum_probs=192.2
Q ss_pred HHHHHHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc
Q 007959 299 SKDIIKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS 377 (583)
Q Consensus 299 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 377 (583)
........++|+..+.||+|+||.||+|... +|..||||++..... ....+.+|++.+..++||||+++++++.....
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 3566777899999999999999999999875 589999998865432 23456678888899999999999999865433
Q ss_pred -------eEEEEEcCCCCchhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC-CCcE
Q 007959 378 -------KLLIYDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-NLEA 446 (583)
Q Consensus 378 -------~~lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~ 446 (583)
.++||||+++ +|.+.+.. ....+++..+..++.|++.||.|||.+ +.+|+||||||+|||++. ++.+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEE
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcE
Confidence 7899999976 55554432 356689999999999999999999944 459999999999999996 8999
Q ss_pred EEeecCcccccCcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHH
Q 007959 447 RVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNF 525 (583)
Q Consensus 447 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 525 (583)
||+|||++........ .....||+.|+|||++.+. .++.++||||||+++|||++|+.||......... ......
T Consensus 172 kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHH
T ss_pred EEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHHHHH
Confidence 9999999987654432 2345689999999998655 4899999999999999999999999764332111 111110
Q ss_pred -----------HhhccccccccCCC-------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 526 -----------LISEDRQREIIDPN-------CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 526 -----------~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...........+.. ..........++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000000 01112224678999999999999999999999975
No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=336.08 Aligned_cols=194 Identities=25% Similarity=0.415 Sum_probs=152.5
Q ss_pred cceeeecCceEEEEEEEc---CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeee--eCCCceEEEEEcCC
Q 007959 312 DHIIGSGGFGTVYKLAMD---DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYC--NSPTSKLLIYDFLP 386 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~lv~e~~~ 386 (583)
+++||+|+||.||+|... ++..||+|++..... ...+.+|++++++++||||+++++++ ......++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999876 478899999975432 35688999999999999999999999 44778899999996
Q ss_pred CCchhhHhhhc--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe----cCCCcEEEeecCcc
Q 007959 387 GGSLDEALHER--------SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----DGNLEARVSDFGLA 454 (583)
Q Consensus 387 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~ 454 (583)
|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5888887632 1249999999999999999999995 499999999999999 67889999999999
Q ss_pred cccCcCCc--eeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcc
Q 007959 455 KLLEDEES--HITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDAS 511 (583)
Q Consensus 455 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~ 511 (583)
+....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 87654322 222446799999999998874 5899999999999999999999999754
No 233
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-38 Score=333.62 Aligned_cols=256 Identities=26% Similarity=0.361 Sum_probs=192.7
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeCC------CceE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSP------TSKL 379 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 379 (583)
..|+..+.||+|+||.||+|... +|+.||||++..... .+.+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46788899999999999999886 589999999875432 234699999999999999999988432 2356
Q ss_pred EEEEcCCCCchhhHhhh---cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC-CcEEEeecCccc
Q 007959 380 LIYDFLPGGSLDEALHE---RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-LEARVSDFGLAK 455 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~ 455 (583)
+||||+++ ++.+.+.. ....+++..+..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 67666643 3567999999999999999999999 5599999999999999955 678999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHh-------
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSG-RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLI------- 527 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~------- 527 (583)
....... .....||..|+|||++.+. .++.++|||||||++|||++|+.||......+. +.......-
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHH
Confidence 7654332 2335689999999998764 799999999999999999999999976432211 111111000
Q ss_pred --hccccccccCCCCCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 528 --SEDRQREIIDPNCEG------VQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 528 --~~~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..........+.... .....+.++.+|+.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000000110011110 11233467999999999999999999999875
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.1e-38 Score=321.21 Aligned_cols=250 Identities=19% Similarity=0.337 Sum_probs=194.6
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeeccc--chhhHHHHHHHHHHHHhCC--CCceeeeeeeeeCCCceEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKL--NEGFDRFFERELEILGSIK--HRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 381 (583)
.++|+..+.||+|+||.||++...+++.||+|.+... .......+.+|++++.+++ ||||+++++++.+....++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4568888999999999999999988999999998643 3344577899999999997 59999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|| +.+++|.+++.. ...+++..+..++.|+++||.|||+ .+++||||||+||+++ ++.+||+|||++.......
T Consensus 107 ~e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp EC-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-----
T ss_pred Ee-cCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeeccccccccCcc
Confidence 99 568899999976 4578999999999999999999995 4999999999999997 4899999999998765433
Q ss_pred ce-eeeeecccccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc
Q 007959 462 SH-ITTIVAGTFGYLAPEYMQS-----------GRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE 529 (583)
Q Consensus 462 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 529 (583)
.. ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~ 255 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDP 255 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCT
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHHHHhc
Confidence 22 2234568999999999865 47889999999999999999999999653211 1111111111
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 530 DRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.. . .. .+.....++.+++.+||+.||++|||++|+++
T Consensus 256 ~~-~----~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 256 NH-E----IE---FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp TS-C----CC---CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc-c----cC---CcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 10 0 01 11112367889999999999999999999986
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.5e-38 Score=314.44 Aligned_cols=257 Identities=25% Similarity=0.361 Sum_probs=204.5
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|++++++++||||+++++++.+....++|+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467889999999999999999876 68899999986532 234567899999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC---CcEEEeecCcccccCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN---LEARVSDFGLAKLLED 459 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~~~~~ 459 (583)
||+++++|.+.+... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.+ +.+||+|||++.....
T Consensus 101 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 999999999998763 569999999999999999999995 499999999999999753 4799999999986654
Q ss_pred CCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCC
Q 007959 460 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 539 (583)
Q Consensus 460 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (583)
... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||....... ....... .... .+
T Consensus 177 ~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~-~~~~--~~-- 242 (287)
T 2wei_A 177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVET-GKYA--FD-- 242 (287)
T ss_dssp CSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH-CCCC--CC--
T ss_pred CCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHc-CCCC--CC--
Confidence 322 223458999999998875 58999999999999999999999997643221 1111111 1100 00
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHhhhh
Q 007959 540 CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ--ILESEIY 581 (583)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~--~L~~~~~ 581 (583)
.+ .....+.++.+++.+|++.||++|||+.|+++ .+++...
T Consensus 243 ~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 285 (287)
T 2wei_A 243 LP-QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285 (287)
T ss_dssp SG-GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred ch-hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence 00 01123467899999999999999999999987 4555443
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-38 Score=321.04 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=178.2
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccc-hhhHHHHHHHHH-HHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLN-EGFDRFFERELE-ILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|+.||+|++.... ......+..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888899999999999999885 68999999997542 233445566666 677789999999999999999999999
Q ss_pred EcCCCCchhhHhhh----cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 383 DFLPGGSLDEALHE----RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 383 e~~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
||+++ +|.+++.. ....+++..+..++.|++.||.|||+. .+++||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99975 88887763 256799999999999999999999952 289999999999999999999999999998765
Q ss_pred cCCceeeeeecccccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 459 DEESHITTIVAGTFGYLAPEYM----QSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
.... .....||..|+|||.+ .+..++.++||||||+++|||++|+.||........ ... .....
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~-----~~~~~ 245 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLT-----QVVKG 245 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------C-----CCCCS
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHH-----HHhcC
Confidence 4322 2234689999999998 456789999999999999999999999975321100 000 00000
Q ss_pred ccCCCCC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~-~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+.+. .........+.+++.+||+.||++|||+.|+++
T Consensus 246 -~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 246 -DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000111 111234467899999999999999999999975
No 237
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.2e-38 Score=325.78 Aligned_cols=260 Identities=18% Similarity=0.246 Sum_probs=197.7
Q ss_pred cCCCccceeeecCceEEEEEEE-cCCcEEEEEeecccchhhHHHHHHHHHHHHhCC-----------CCceeeeeeeeeC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIK-----------HRYLVNLRGYCNS 374 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 374 (583)
.+|...+.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788899999999999999986 46889999998753 334567889999998886 8999999999875
Q ss_pred CC----ceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec------CC
Q 007959 375 PT----SKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD------GN 443 (583)
Q Consensus 375 ~~----~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~------~~ 443 (583)
.. ..++||||+ +++|.+++... ...+++..+..++.||+.||+|||+. .+|+||||||+|||++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCc
Confidence 43 688999999 88999999764 34599999999999999999999952 2899999999999994 44
Q ss_pred CcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccc----hH
Q 007959 444 LEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL----NI 519 (583)
Q Consensus 444 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~----~~ 519 (583)
+.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||+||+.||......... .+
T Consensus 175 ~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred ceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 589999999998765432 2346899999999999999999999999999999999999999764322110 11
Q ss_pred HHHHHHH-----------------hhcc-ccccccC----------CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 007959 520 VGWLNFL-----------------ISED-RQREIID----------PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHR 571 (583)
Q Consensus 520 ~~~~~~~-----------------~~~~-~~~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~e 571 (583)
....... .... ....+.. ......+.....++.+++.+||+.||++|||++|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 1111000 0000 0000000 0001244677788999999999999999999999
Q ss_pred HHH
Q 007959 572 VVQ 574 (583)
Q Consensus 572 vl~ 574 (583)
+++
T Consensus 331 ll~ 333 (373)
T 1q8y_A 331 LVN 333 (373)
T ss_dssp HHT
T ss_pred Hhh
Confidence 976
No 238
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=331.95 Aligned_cols=248 Identities=25% Similarity=0.361 Sum_probs=189.4
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEEcC
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 385 (583)
.+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 35777899999999997766677899999999965322 2356799999999 8999999999999999999999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC-----CCcEEEeecCcccccCcC
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG-----NLEARVSDFGLAKLLEDE 460 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgl~~~~~~~ 460 (583)
+ |+|.+++.......++..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 69999998766566666778999999999999995 49999999999999953 346889999999876543
Q ss_pred Cc--eeeeeeccccccccccccc---cCCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 461 ES--HITTIVAGTFGYLAPEYMQ---SGRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 461 ~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
.. .......||+.|+|||++. ...++.++||||+||++|||+| |..||....... ........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-------~~~~~~~~---- 245 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-------ANILLGAC---- 245 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------HHHHTTCC----
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------HHHHhccC----
Confidence 22 2234467999999999987 4567889999999999999999 999985432211 11111110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..............+.+++.+||+.||++|||++||++
T Consensus 246 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 --SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 01111122344566889999999999999999999983
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.8e-38 Score=330.66 Aligned_cols=247 Identities=24% Similarity=0.324 Sum_probs=186.2
Q ss_pred CccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEEEEcCCCC
Q 007959 310 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLIYDFLPGG 388 (583)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 388 (583)
...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+....++||||++ |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 3457899999999988777789999999986532 34678899999876 89999999999999999999999995 6
Q ss_pred chhhHhhhcCCC------CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCC-------------CcEEEe
Q 007959 389 SLDEALHERSEQ------LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGN-------------LEARVS 449 (583)
Q Consensus 389 sL~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~kl~ 449 (583)
+|.+++...... .++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999764221 1333457899999999999995 499999999999999754 489999
Q ss_pred ecCcccccCcCCcee---eeeecccccccccccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCcchhcccch
Q 007959 450 DFGLAKLLEDEESHI---TTIVAGTFGYLAPEYMQS-------GRATEKTDVYSFGVLVLEVLS-GKRPTDASFIEKGLN 518 (583)
Q Consensus 450 Dfgl~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~il~ellt-g~~p~~~~~~~~~~~ 518 (583)
|||+++......... .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||+......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--- 247 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---
Confidence 999999776543221 234579999999999865 578999999999999999999 999997542221
Q ss_pred HHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 519 IVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
...... ... .+..........+.++.+++.+||+.||++|||+.||++
T Consensus 248 -~~i~~~---~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 -SNIIRG---IFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHHT---CCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHhcC---CCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111110 000 010011123566788999999999999999999999975
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=313.77 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=181.8
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch--hhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE--GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.++|+..+.||+|+||.||++... +|+.||+|.+..... ...+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 567888899999999999999886 689999999975432 22334555556788889999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+ ++.+..+.......+++..+..++.|++.||.|||+. .+++||||||+||+++.++.+||+|||++........
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 5566666655567799999999999999999999952 2899999999999999999999999999976654322
Q ss_pred eeeeeeccccccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccC
Q 007959 463 HITTIVAGTFGYLAPEYMQ-----SGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 537 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (583)
.....||+.|+|||.+. ...++.++||||||+++|||++|+.||...... ............. .
T Consensus 181 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~--~-- 249 (318)
T 2dyl_A 181 --KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEEPP--L-- 249 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSCCC--C--
T ss_pred --ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccCCC--C--
Confidence 23346899999999984 457899999999999999999999999752211 1111111111110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 538 PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+ .....+.++.+++.+||+.||++|||++|+++
T Consensus 250 --~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 --LP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --CC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 01123467889999999999999999999976
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.6e-38 Score=319.73 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=171.8
Q ss_pred hcCCCcc-ceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeeeeeC----CCceE
Q 007959 306 LETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNS----PTSKL 379 (583)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 379 (583)
.++|... +.||+|+||.||++... +++.||+|++..... ...+....+..++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4567764 56999999999999877 689999999875321 12223334667799999999999865 44578
Q ss_pred EEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCccc
Q 007959 380 LIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLAK 455 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~ 455 (583)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998653 469999999999999999999995 49999999999999975 4559999999998
Q ss_pred ccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccc
Q 007959 456 LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREI 535 (583)
Q Consensus 456 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (583)
...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... ........ ....
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~-~~~~ 252 (336)
T 3fhr_A 180 ETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG---MKRRIRLG-QYGF 252 (336)
T ss_dssp EC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CC
T ss_pred eccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh---HHHhhhcc-cccc
Confidence 654322 2345689999999999888899999999999999999999999975432211000 00000000 0000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 536 IDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+ .....+.++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 253 PNP----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CTT----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred Cch----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 11234567899999999999999999999987
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-37 Score=319.22 Aligned_cols=259 Identities=22% Similarity=0.290 Sum_probs=198.3
Q ss_pred cCCCccceeeecCceEEEEEEEc-CC-cEEEEEeecccchhhHHHHHHHHHHHHhCCCCc------eeeeeeeeeCCCce
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DG-NVFALKRIDKLNEGFDRFFERELEILGSIKHRY------LVNLRGYCNSPTSK 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~ 378 (583)
++|+..+.||+|+||.||++... ++ ..||+|.+... ....+.+.+|++++++++|++ ++.+.+++......
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 57888999999999999999875 34 68999998753 334567888999999987765 89999999999999
Q ss_pred EEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe-----------------
Q 007959 379 LLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL----------------- 440 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----------------- 440 (583)
++||||+ ++++.+.+... ...+++..+..++.||+.||+||| +.+|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 56777777654 356999999999999999999999 5599999999999999
Q ss_pred --cCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccch
Q 007959 441 --DGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN 518 (583)
Q Consensus 441 --~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~ 518 (583)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 567899999999998654332 23568999999999999999999999999999999999999997643321111
Q ss_pred HHHHHHH-----Hhhcc-ccccccC--------------------C--CCCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 007959 519 IVGWLNF-----LISED-RQREIID--------------------P--NCEGVQSESLDALLAVATQCVSSSPDDRPTMH 570 (583)
Q Consensus 519 ~~~~~~~-----~~~~~-~~~~~~~--------------------~--~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~ 570 (583)
....... ..... ....... + ...........++.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 1100000 00000 0000000 0 00011234456899999999999999999999
Q ss_pred HHHH
Q 007959 571 RVVQ 574 (583)
Q Consensus 571 evl~ 574 (583)
|+++
T Consensus 330 e~l~ 333 (355)
T 2eu9_A 330 EALL 333 (355)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9974
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=316.37 Aligned_cols=243 Identities=23% Similarity=0.331 Sum_probs=191.4
Q ss_pred HHHhcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh------hHHHHHHHHHHHHhC----CCCceeeeeee
Q 007959 303 IKKLETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSI----KHRYLVNLRGY 371 (583)
Q Consensus 303 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~ 371 (583)
..-.++|+..+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 334567999999999999999999764 6889999999654221 223456789999888 89999999999
Q ss_pred eeCCCceEEEEEc-CCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEe
Q 007959 372 CNSPTSKLLIYDF-LPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVS 449 (583)
Q Consensus 372 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 449 (583)
+...+..++|+|| +++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 789999999976 45699999999999999999999965 999999999999999 88999999
Q ss_pred ecCcccccCcCCceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhh
Q 007959 450 DFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLIS 528 (583)
Q Consensus 450 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 528 (583)
|||++....... .....|+..|+|||++.+..+ +.++||||+|+++|||++|+.||+..... .
T Consensus 183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------~- 246 (312)
T 2iwi_A 183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------L- 246 (312)
T ss_dssp CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------H-
T ss_pred EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------h-
Confidence 999998765432 234568999999999887766 45899999999999999999999753210 0
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 529 EDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
... . ..+......+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~--~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 EAE--L-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HTC--C-------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhc--c-------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0 011223467889999999999999999999986
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.2e-38 Score=316.65 Aligned_cols=240 Identities=25% Similarity=0.360 Sum_probs=197.7
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccchh------hHHHHHHHHHHHHhCC--CCceeeeeeeeeCCC
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEG------FDRFFERELEILGSIK--HRYLVNLRGYCNSPT 376 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 376 (583)
.++|+..+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.++++++ |+||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 457888999999999999999764 6889999998753221 2245678999999996 599999999999999
Q ss_pred ceEEEEEcCCC-CchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEec-CCCcEEEeecCcc
Q 007959 377 SKLLIYDFLPG-GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLD-GNLEARVSDFGLA 454 (583)
Q Consensus 377 ~~~lv~e~~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~ 454 (583)
..++|+|++.+ ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++.+||+|||++
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 99999999976 899999976 4579999999999999999999995 4999999999999999 7899999999999
Q ss_pred cccCcCCceeeeeeccccccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRA-TEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR 533 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (583)
....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ... .
T Consensus 198 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~---~ 259 (320)
T 3a99_A 198 ALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRG---Q 259 (320)
T ss_dssp EECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHC---C
T ss_pred ccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hcc---c
Confidence 8765432 233568999999999887766 78899999999999999999999753210 000 0
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 534 EIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
..+. ...+.++.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 VFFR-------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCS-------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 122367889999999999999999999986
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=9.2e-38 Score=337.95 Aligned_cols=266 Identities=26% Similarity=0.373 Sum_probs=203.8
Q ss_pred hcCCCccceeeecCceEEEEEEEc-CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeC------CCc
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNS------PTS 377 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 377 (583)
..+|+..+.||+|+||.||+|... +|..||+|++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 468999999999999999999774 5889999998753 34445679999999999999999999998755 677
Q ss_pred eEEEEEcCCCCchhhHhhhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCc---EEEeecC
Q 007959 378 KLLIYDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLE---ARVSDFG 452 (583)
Q Consensus 378 ~~lv~e~~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 452 (583)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997643 358999999999999999999995 49999999999999996664 9999999
Q ss_pred cccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhc---
Q 007959 453 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE--- 529 (583)
Q Consensus 453 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 529 (583)
++........ .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... ..|.......
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC-----
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccch
Confidence 9987654332 23457899999999999999999999999999999999999999753211 1111000000
Q ss_pred -----cccc--cccC---CCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHhhhh
Q 007959 530 -----DRQR--EIID---PNCEGVQSESLDALLAVATQCVSSSPDDRPTMHR-----VVQILESEIY 581 (583)
Q Consensus 530 -----~~~~--~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~e-----vl~~L~~~~~ 581 (583)
.... ..+. +.........+..+.+++.+||+.||++|||++| ..+.+++++.
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000 0011 1111244567788999999999999999999988 5566666553
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-37 Score=339.34 Aligned_cols=239 Identities=18% Similarity=0.342 Sum_probs=193.7
Q ss_pred cCCCccceeeecCceEEEEEEEc--CCcEEEEEeeccc-chhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCc-----e
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD--DGNVFALKRIDKL-NEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTS-----K 378 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 378 (583)
++|+..+.||+|+||.||++... +|+.||||++... .......+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888999999999999999876 5899999988653 33445678999999999999999999999977655 6
Q ss_pred EEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 379 LLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
++||||+++++|.+++.. .+++..++.++.||+.||.|||+ .+|+||||||+|||++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999998754 69999999999999999999995 499999999999999976 99999999998765
Q ss_pred cCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC
Q 007959 459 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 538 (583)
Q Consensus 459 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (583)
.. ....||+.|+|||++.+. ++.++||||||+++|+|++|..|+....... + ..
T Consensus 233 ~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------------------~-~~ 286 (681)
T 2pzi_A 233 SF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG-------------------L-PE 286 (681)
T ss_dssp CC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS-------------------C-CT
T ss_pred cC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc-------------------c-cc
Confidence 43 335699999999998765 4899999999999999999998876422110 0 00
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHHHHHhhh
Q 007959 539 NCEGVQSESLDALLAVATQCVSSSPDDRPT-MHRVVQILESEI 580 (583)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt-~~evl~~L~~~~ 580 (583)
..........+.+++.+||+.||++||+ ++++.+.|...+
T Consensus 287 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 287 --DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0011123467889999999999999995 666777776654
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.6e-36 Score=296.99 Aligned_cols=228 Identities=12% Similarity=0.086 Sum_probs=182.9
Q ss_pred cCCCccceeeecCceEEEEEEEcC-CcEEEEEeecccc---hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLN---EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
.+|+..+.||+|+||.||++.... ++.||+|.+.... ....+.+.+|+..+.+++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 467888999999999999998864 8999999997542 233477899999999999999999999999999999999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.++++.. ....++.+++.|++.||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999999542 4566788999999999999995 499999999999999999999998543
Q ss_pred eeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCC-
Q 007959 463 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE- 541 (583)
Q Consensus 463 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 541 (583)
|++ .++.++||||||+++|||+||+.||.......... ...........
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~~~~~~~ 224 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------------PAERDTAGQPIE 224 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------------ECCBCTTSCBCC
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------------HHHHHhccCCCC
Confidence 333 36889999999999999999999997643321100 00000000000
Q ss_pred --CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 007959 542 --GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEIY 581 (583)
Q Consensus 542 --~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~~~~~ 581 (583)
......+.++.+++.+||+.||++| |+.|+++.|++...
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 0112334678999999999999999 99999999998653
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-36 Score=314.52 Aligned_cols=238 Identities=16% Similarity=0.174 Sum_probs=179.0
Q ss_pred cCCCccceeeecCceEEEEEEEc-CCcEEEEEeecccch---hhHHHHHHHHHHHHhCCC-Ccee---------------
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE---GFDRFFERELEILGSIKH-RYLV--------------- 366 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv--------------- 366 (583)
.+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++..++| +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45667789999999999999854 689999999874322 235679999999999987 2211
Q ss_pred ee------eeeeeC-----CCceEEEEEcCCCCchhhHhhh------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 007959 367 NL------RGYCNS-----PTSKLLIYDFLPGGSLDEALHE------RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRII 429 (583)
Q Consensus 367 ~l------~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 429 (583)
.+ ..++.. ....+++|+++ +++|.++++. ....+++..++.++.||++||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 11 111111 22456777765 6899999852 23458889999999999999999995 5999
Q ss_pred ecCCCCCCeEecCCCcEEEeecCcccccCcCCceeeeeecccccccccccc----------ccCCCCcccchhhHHHHHH
Q 007959 430 HRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYM----------QSGRATEKTDVYSFGVLVL 499 (583)
Q Consensus 430 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~G~il~ 499 (583)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865433 334567 999999998 5556889999999999999
Q ss_pred HHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 007959 500 EVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVV 573 (583)
Q Consensus 500 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl 573 (583)
||+||+.||........ ...++. ... ..+..+.+++.+||+.||++|||+.|++
T Consensus 309 elltg~~Pf~~~~~~~~---------------~~~~~~-~~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG---------------SEWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGGSC---------------SGGGGS-SCC----CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchhhh---------------HHHHHh-hcc----cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999976433211 111111 111 1236789999999999999999987774
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.5e-35 Score=296.19 Aligned_cols=226 Identities=22% Similarity=0.332 Sum_probs=177.6
Q ss_pred hcCCCcc-ceeeecCceEEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHH-HhCCCCceeeeeeeeeC----CCce
Q 007959 306 LETLDDD-HIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEIL-GSIKHRYLVNLRGYCNS----PTSK 378 (583)
Q Consensus 306 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 378 (583)
.++|... +.||+|+||.||++... +++.||+|++... ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3556665 78999999999999874 6889999998642 3567788887 56699999999999876 6778
Q ss_pred EEEEEcCCCCchhhHhhhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC---CCcEEEeecCcc
Q 007959 379 LLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG---NLEARVSDFGLA 454 (583)
Q Consensus 379 ~lv~e~~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~ 454 (583)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998753 469999999999999999999995 49999999999999997 788999999998
Q ss_pred cccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCcchhcccchHHHHHHHHhhcccccc
Q 007959 455 KLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE 534 (583)
Q Consensus 455 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (583)
..... ..++.++||||+|+++|||++|+.||........ ... ...
T Consensus 168 ~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~-~~~ 212 (299)
T 3m2w_A 168 KETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPG-MKT 212 (299)
T ss_dssp EECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CC-SCC
T ss_pred ccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHH-HHH
Confidence 64332 3467899999999999999999999965322110 000 000
Q ss_pred ccCCCCCCCC----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 007959 535 IIDPNCEGVQ----SESLDALLAVATQCVSSSPDDRPTMHRVVQ 574 (583)
Q Consensus 535 ~~~~~~~~~~----~~~~~~l~~l~~~cl~~dp~~RPt~~evl~ 574 (583)
.+.......+ ...+.++.+++.+||+.||++|||+.|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0110111111 223567999999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.7e-36 Score=305.83 Aligned_cols=241 Identities=18% Similarity=0.201 Sum_probs=183.2
Q ss_pred hcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccc--------hhhHHHHHHHHHHHHhCC---------CCceeee
Q 007959 306 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--------EGFDRFFERELEILGSIK---------HRYLVNL 368 (583)
Q Consensus 306 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 368 (583)
.++|+..+.||+|+||+||+|.. +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999988 68999999997542 122367889999988886 6666655
Q ss_pred eee-----------------eeC-------------CCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 007959 369 RGY-----------------CNS-------------PTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLA 418 (583)
Q Consensus 369 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 418 (583)
.+. +.+ ....++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 332 6789999999999987777743 56899999999999999999
Q ss_pred HHh-hcCCCCeeecCCCCCCeEecCCC--------------------cEEEeecCcccccCcCCceeeeeeccccccccc
Q 007959 419 YLH-HDCSPRIIHRDIKSSNILLDGNL--------------------EARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 477 (583)
Q Consensus 419 ~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aP 477 (583)
||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+||
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 999 65 899999999999999887 8999999999876532 24699999999
Q ss_pred cccccCCCCcccchhhHHHH-HHHHHhCCCCCCcchhcccchHHHHHHHHhhccccccccCC-CCCCCCHHHHHHHHHHH
Q 007959 478 EYMQSGRATEKTDVYSFGVL-VLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP-NCEGVQSESLDALLAVA 555 (583)
Q Consensus 478 E~~~~~~~~~~~Dv~s~G~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~ 555 (583)
|++.+.. +.++||||+|++ .+++++|..||... .|.......-........ .........+.++.+|+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHH
Confidence 9998766 899999998776 78888899997431 111111100000000111 11112346778899999
Q ss_pred HHccccCCCCCCCHHHHH
Q 007959 556 TQCVSSSPDDRPTMHRVV 573 (583)
Q Consensus 556 ~~cl~~dp~~RPt~~evl 573 (583)
.+||+.| |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=5e-29 Score=269.25 Aligned_cols=185 Identities=18% Similarity=0.124 Sum_probs=129.9
Q ss_pred eeeecCceEEEEE-EEcCCcEEEEEeeccc----------chhhHHHHHHHHHHHHhC-CCCceeeeeeeeeCCCceEEE
Q 007959 314 IIGSGGFGTVYKL-AMDDGNVFALKRIDKL----------NEGFDRFFERELEILGSI-KHRYLVNLRGYCNSPTSKLLI 381 (583)
Q Consensus 314 ~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 381 (583)
..+.|++|.+..+ +..-|+.||+|.+.+. .+...++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3556666666553 2335889999998642 122346799999999999 799999999999999999999
Q ss_pred EEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCC
Q 007959 382 YDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE 461 (583)
Q Consensus 382 ~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 461 (583)
|||++|++|.+++.. .+.++.. +|+.||+.||+|+|+ .+||||||||+|||++.++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999976 4556654 588999999999995 499999999999999999999999999998765433
Q ss_pred ceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 007959 462 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRP 507 (583)
Q Consensus 462 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p 507 (583)
. .....+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 394 ~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 S-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred c-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2 2344679999999999875 567789999999998887665443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=8.8e-27 Score=233.98 Aligned_cols=175 Identities=35% Similarity=0.593 Sum_probs=160.9
Q ss_pred CCCcchHHHHHHHHHhccCCCCCCCCCCCCCCCCCc--cceeEeCCC---CcEEEEecCCCCCcc--cccccccCCCCCc
Q 007959 27 RAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCN--WKGVKCDKN---KRVITLSLTNHKLSG--PISADLGKLDQLK 99 (583)
Q Consensus 27 ~~~~~~~~~L~~~~~~~~~~~~~~~~w~~~~~~~c~--w~gv~c~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~ 99 (583)
.|.+.|.+||++||+++.++. .+.+|.. +.+||. |.||+|+.. .+|+.|+|++|++++ .+|..|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477889999999999997665 7899974 578998 999999854 799999999999998 8999999999999
Q ss_pred eEEccC-CccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccC
Q 007959 100 FLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNN 178 (583)
Q Consensus 100 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 178 (583)
+|+|++ |.+.+.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCC-Ccccc-CCCccccccCCC
Q 007959 179 FLVGAIPS-DGVLT-KFSESSFFGNRG 203 (583)
Q Consensus 179 ~l~~~~~~-~~~l~-~l~~l~l~~N~~ 203 (583)
++++..|. +..++ +|+.|++++|+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCee
Confidence 99976664 47777 999999999974
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.2e-26 Score=249.34 Aligned_cols=183 Identities=17% Similarity=0.199 Sum_probs=145.8
Q ss_pred ccceeeecCceEEEEEEEcCCcEEEEEeecccc--------hhhHHHHHHHHHHHHhCCCCceeeeeeeeeCCCceEEEE
Q 007959 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--------EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 382 (583)
..+.||+|+||.||++. ..+..+++|+..... ....+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 45789999999999994 457788888764321 112345899999999999999997777777788889999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCc
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEES 462 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 462 (583)
||+++++|.++++. +..++.|+++||+|||+ .+|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED---------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999965 56899999999999995 49999999999999998 999999999998765432
Q ss_pred ee------eeeecccccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCC
Q 007959 463 HI------TTIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVLSGKRPT 508 (583)
Q Consensus 463 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~il~elltg~~p~ 508 (583)
.. .....||+.|+|||++.. ..|+..+|+|+..+-.++-+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 21 134679999999999986 56888899999998888888877765
No 254
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.90 E-value=2.6e-23 Score=198.68 Aligned_cols=151 Identities=22% Similarity=0.254 Sum_probs=138.8
Q ss_pred CCCCCccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceee
Q 007959 57 DPDPCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLS 126 (583)
Q Consensus 57 ~~~~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 126 (583)
+...|+|++|.|+. .++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 56789999999964 35899999999999988899999999999999999999966667789999999999
Q ss_pred cccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCC
Q 007959 127 LQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 127 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c 205 (583)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++. +..+++|+.|++.+|++.|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999777778999999999999999999 5899999999999999999999998875 4789999999999999999
Q ss_pred CCc
Q 007959 206 GKQ 208 (583)
Q Consensus 206 ~~~ 208 (583)
+|+
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 986
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=7.3e-24 Score=238.62 Aligned_cols=175 Identities=23% Similarity=0.377 Sum_probs=112.8
Q ss_pred hccCCCcchHHHHHHHHHhccCCCCCCCCCCCCCCCCCccceeEeCCCCcEEEEecCCCCCccc---ccc----------
Q 007959 24 NKSRAINSDGEALLSFRTAVVSSDGFLNQWRPEDPDPCNWKGVKCDKNKRVITLSLTNHKLSGP---ISA---------- 90 (583)
Q Consensus 24 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~---~~~---------- 90 (583)
+++.+.+.|++||++||+++.+|. .+++|. .+.+||.|.||+|+ .++|+.|+|+++.++|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 334456789999999999998877 899997 46799999999998 78999999999999886 554
Q ss_pred -------------cccCCCCCceEEccCCccCCCCCC--CcCcccccceeecccccccccCChhh-hccCCCceEeccCC
Q 007959 91 -------------DLGKLDQLKFLNLHSNNFYGEIPS--ELGNCTELQGLSLQSNYLSGSIPSEL-GNLSNLLNLDISSN 154 (583)
Q Consensus 91 -------------~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N 154 (583)
.|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 556666666666666666666666 66666666666666666666555543 55566666666666
Q ss_pred cCCCCCCcc---ccccCCCCEEEeccCcCcccCCCCccccCCCccccccCC
Q 007959 155 SLSDYIPPS---LGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 155 ~l~~~~~~~---~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (583)
++++..|.. +.++++|++|+|++|.+++..+. ..+++|+.|++++|.
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~ 211 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNN 211 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSC
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCc
Confidence 655544433 33344444444444433332222 233344444444443
No 256
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.89 E-value=3.6e-23 Score=196.42 Aligned_cols=151 Identities=16% Similarity=0.200 Sum_probs=138.4
Q ss_pred CCccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccc
Q 007959 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (583)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 129 (583)
.|.|..|.|.. ..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 36788899963 24799999999999987778999999999999999999988899999999999999999
Q ss_pred ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCc
Q 007959 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
|+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++. +..+++|+.|++++|+|.|+|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 999966666789999999999999999998899999999999999999999999886 4789999999999999999988
Q ss_pred cc
Q 007959 209 IN 210 (583)
Q Consensus 209 ~~ 210 (583)
+.
T Consensus 170 l~ 171 (220)
T 2v9t_B 170 LK 171 (220)
T ss_dssp GH
T ss_pred cH
Confidence 64
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.5e-23 Score=204.96 Aligned_cols=152 Identities=12% Similarity=0.088 Sum_probs=121.1
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch------------------hhHHHHHHHHHHHHhCCC
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE------------------GFDRFFERELEILGSIKH 362 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 362 (583)
.+......|...+.||+|+||.||+|...+|+.||+|.++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444455667799999999999999997799999999864321 13456899999999999
Q ss_pred CceeeeeeeeeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecC
Q 007959 363 RYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDG 442 (583)
Q Consensus 363 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 442 (583)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+ .+|+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-
Confidence 4 666665543 55699999999999999 532 2245799999999999995 5999999999999999
Q ss_pred CCcEEEeecCcccccCcCCceeeeeecccccccccccccc
Q 007959 443 NLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQS 482 (583)
Q Consensus 443 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 482 (583)
++.+||+|||+++. +..++|||++.+
T Consensus 228 ~~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 228 EEGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 99999999999973 345788998753
No 258
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.9e-23 Score=234.53 Aligned_cols=171 Identities=24% Similarity=0.276 Sum_probs=149.2
Q ss_pred CcchHHHHHHHHHhccCCCCCCCCCCCCC----CCC--Ccc------------ceeEeCCCCcEEEEecCCCCCcccccc
Q 007959 29 INSDGEALLSFRTAVVSSDGFLNQWRPED----PDP--CNW------------KGVKCDKNKRVITLSLTNHKLSGPISA 90 (583)
Q Consensus 29 ~~~~~~~L~~~~~~~~~~~~~~~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~L~L~~n~l~~~~~~ 90 (583)
...|.+||++||+++.+| +|+.++ .+| |+| .||+|+...+|+.|+|++|+|+|.+|+
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 357899999999999665 786554 456 999 999999888999999999999999999
Q ss_pred cccCCCCCceEEc-cCCccCCC----------------------------------------------------------
Q 007959 91 DLGKLDQLKFLNL-HSNNFYGE---------------------------------------------------------- 111 (583)
Q Consensus 91 ~~~~l~~L~~L~L-~~N~l~~~---------------------------------------------------------- 111 (583)
.|++|++|++|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 77765444
Q ss_pred ------------------CCCCcCcccccceeecccccccc-----------------cCChhhh--ccCCCceEeccCC
Q 007959 112 ------------------IPSELGNCTELQGLSLQSNYLSG-----------------SIPSELG--NLSNLLNLDISSN 154 (583)
Q Consensus 112 ------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~N 154 (583)
+|..|++|++|++|+|++|+|++ .+|..++ ++++|+.|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78889999999999999999997 3888877 9999999999999
Q ss_pred cCCCCCCccccccCCCCEEEeccCc-Ccc-cCC-CCcccc-------CCCccccccCCCC
Q 007959 155 SLSDYIPPSLGKLQRLITFNVSNNF-LVG-AIP-SDGVLT-------KFSESSFFGNRGL 204 (583)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~-~~~~l~-------~l~~l~l~~N~~~ 204 (583)
++.+.+|..|.++++|+.|+|++|+ +++ .+| .+..++ +|+.|++++|...
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 9999999999999999999999998 887 444 334444 8999999999865
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.88 E-value=2.3e-23 Score=210.30 Aligned_cols=176 Identities=17% Similarity=0.269 Sum_probs=154.1
Q ss_pred cCCCcchHHHHHHHHHhc-cCCCCCCCCCC---CCCCCCCccceeEeC---------CCCcEEEEecCCCCCcccccccc
Q 007959 26 SRAINSDGEALLSFRTAV-VSSDGFLNQWR---PEDPDPCNWKGVKCD---------KNKRVITLSLTNHKLSGPISADL 92 (583)
Q Consensus 26 ~~~~~~~~~~L~~~~~~~-~~~~~~~~~w~---~~~~~~c~w~gv~c~---------~~~~l~~L~L~~n~l~~~~~~~~ 92 (583)
+.+...+.+||++||..+ .++.+++.+|. ....++|.|.|+.|+ ...+|+.|+|++|+|+ .+|..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 346678999999999998 45667888994 456789999999995 3478999999999999 788889
Q ss_pred cCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccc------
Q 007959 93 GKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGK------ 166 (583)
Q Consensus 93 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------ 166 (583)
.++++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 89999999999999999999999 88999999999999999999888888887664
Q ss_pred ---cCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 167 ---LQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 167 ---l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
+++|++|+|++|+|+.++..+..+++|+.|++++|+..
T Consensus 179 ~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC
T ss_pred hccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC
Confidence 89999999999999966666788899999999998754
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=192.23 Aligned_cols=150 Identities=19% Similarity=0.229 Sum_probs=136.1
Q ss_pred CccceeEeCC----------CCcEEEEecCCCCCccccc-ccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccc
Q 007959 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPIS-ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (583)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 129 (583)
|.|..+.|+. ...++.|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 5788888853 2468899999999997755 4689999999999999999977777999999999999999
Q ss_pred ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCc
Q 007959 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|. +..+++|+.|++++|++.|+|+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999988888899999999999999999998899999999999999999999999765 4889999999999999999998
Q ss_pred cc
Q 007959 209 IN 210 (583)
Q Consensus 209 ~~ 210 (583)
+.
T Consensus 171 l~ 172 (220)
T 2v70_A 171 LA 172 (220)
T ss_dssp GH
T ss_pred hH
Confidence 64
No 261
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=7.7e-23 Score=225.15 Aligned_cols=173 Identities=22% Similarity=0.242 Sum_probs=152.5
Q ss_pred cchHHHHHHHHHhccCCCCC--------CCCCCCCCCCCCcc---ceeEeCCCCcEEEEecCCCCCcccccccccCCCCC
Q 007959 30 NSDGEALLSFRTAVVSSDGF--------LNQWRPEDPDPCNW---KGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQL 98 (583)
Q Consensus 30 ~~~~~~L~~~~~~~~~~~~~--------~~~w~~~~~~~c~w---~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L 98 (583)
..|.+||.+++.++.+++.. ..+|+. +.++|.| .||+|+..++|+.|+|++|+++|.+|..|++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 47899999999998655422 247974 5899999 99999877899999999999999999999999999
Q ss_pred ceEEccCCc-----------------------------------------------------------------------
Q 007959 99 KFLNLHSNN----------------------------------------------------------------------- 107 (583)
Q Consensus 99 ~~L~L~~N~----------------------------------------------------------------------- 107 (583)
++|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999984
Q ss_pred -------cCCCCCCCcCcccccceeeccccccccc-----------------CChhhh--ccCCCceEeccCCcCCCCCC
Q 007959 108 -------FYGEIPSELGNCTELQGLSLQSNYLSGS-----------------IPSELG--NLSNLLNLDISSNSLSDYIP 161 (583)
Q Consensus 108 -------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~~ 161 (583)
|++ +|..|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|++.+.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 445 888899999999999999999975 999988 99999999999999999999
Q ss_pred ccccccCCCCEEEeccCc-Ccc-cCC-CCccc------cCCCccccccCCCC
Q 007959 162 PSLGKLQRLITFNVSNNF-LVG-AIP-SDGVL------TKFSESSFFGNRGL 204 (583)
Q Consensus 162 ~~~~~l~~L~~L~l~~N~-l~~-~~~-~~~~l------~~l~~l~l~~N~~~ 204 (583)
..|.++++|++|+|++|+ +++ .+| .+..+ ++|+.|++++|...
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999999999999998 987 444 44555 89999999999865
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=8.6e-22 Score=185.32 Aligned_cols=150 Identities=21% Similarity=0.205 Sum_probs=135.5
Q ss_pred CCCccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecc
Q 007959 59 DPCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (583)
Q Consensus 59 ~~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 128 (583)
..|.|.+|.|+. .++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 347899999964 3579999999999997777789999999999999999997666678999999999999
Q ss_pred cccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCC
Q 007959 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGK 207 (583)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~ 207 (583)
+|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|.+
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 99999777777899999999999999999877778999999999999999999988864 78999999999999999987
Q ss_pred c
Q 007959 208 Q 208 (583)
Q Consensus 208 ~ 208 (583)
+
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 6
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.82 E-value=3.3e-22 Score=212.79 Aligned_cols=146 Identities=23% Similarity=0.267 Sum_probs=113.2
Q ss_pred CCccceeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcC-cccccceeecccccccccCCh
Q 007959 60 PCNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELG-NCTELQGLSLQSNYLSGSIPS 138 (583)
Q Consensus 60 ~c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~ 138 (583)
.|.+.++.|...++|+.|+|++|.|++..|..|+++++|++|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |.
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~ 186 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG 186 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc
Confidence 3556677777677888888888888877777888888888888888888877777775 688888888888888855 32
Q ss_pred hhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCc
Q 007959 139 ELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.|+++++....+++|+.|++++|++.|++.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred -cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 3357888888888888886 4455888888888888888888877777778888888888888887643
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.82 E-value=3.8e-20 Score=179.43 Aligned_cols=137 Identities=23% Similarity=0.261 Sum_probs=118.3
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 35788899999999998777788889999999999999987777778889999999999999997666778889999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~ 206 (583)
+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..+++|+.|++++|++.|.
T Consensus 137 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 137 RLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999987677888999999999999999988774 47788999999999999887
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=1.5e-20 Score=211.66 Aligned_cols=125 Identities=38% Similarity=0.623 Sum_probs=118.1
Q ss_pred ccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCC
Q 007959 92 LGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLI 171 (583)
Q Consensus 92 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 171 (583)
+..+++|++|||++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCcCcccCCCCccccCCCccccccCCCCCCCcccccccCCC
Q 007959 172 TFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQINVTCKNDS 217 (583)
Q Consensus 172 ~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~~~c~~~~ 217 (583)
+|+|++|+++|.+|....+..+...++.||+.+||.|+. .|....
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~ 752 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSN 752 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCc
Confidence 999999999999999888999999999999999999987 887443
No 266
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.82 E-value=4.9e-20 Score=182.45 Aligned_cols=139 Identities=24% Similarity=0.186 Sum_probs=125.6
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3568899999999998 778889999999999999999997777889999999999999999997777788999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCcc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~ 209 (583)
+|++|+|++..+..|..+++|+.|+|++|+|+.+++....+.+|+.+++++|||.|+|.+
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCcc
Confidence 999999998666778899999999999999998888888888999999999999999865
No 267
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.82 E-value=4.4e-20 Score=171.21 Aligned_cols=132 Identities=22% Similarity=0.263 Sum_probs=120.7
Q ss_pred EEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCC
Q 007959 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (583)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (583)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35788899999 6776553 69999999999999 88899999999999999999999888889999999999999999
Q ss_pred cCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCccc
Q 007959 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
+|+++.|..|..+++|+.|+|++|+|+.+++. +..+++|+.|++++|+|.|+|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCH
Confidence 99998888999999999999999999998886 478999999999999999998864
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=6.9e-20 Score=169.83 Aligned_cols=133 Identities=21% Similarity=0.275 Sum_probs=116.8
Q ss_pred EEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCC-CcCcccccceeecccccccccCChhhhccCCCceEeccC
Q 007959 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPS-ELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISS 153 (583)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 153 (583)
++|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46788889997 67776643 899999999999965554 489999999999999999988899999999999999999
Q ss_pred CcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCccc
Q 007959 154 NSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
|+|++..+..|.++++|++|+|++|+|++.++.. ..+++|+.|++++|++.|+|++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch
Confidence 9999988888999999999999999999987754 78999999999999999998864
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.81 E-value=7.1e-20 Score=177.48 Aligned_cols=133 Identities=23% Similarity=0.222 Sum_probs=122.2
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 57899999999999888889999999999999999999888888999999999999999999777788999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
++|+|++..+..|..+++|+.|+|++|+|+++++. +..+++|+.|++++|+..
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 99999987777789999999999999999998885 588999999999999754
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.81 E-value=1.2e-19 Score=178.02 Aligned_cols=139 Identities=24% Similarity=0.203 Sum_probs=125.8
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 45789999999999998777788999999999999999997777778999999999999999997777778999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (583)
+|++|+|++..+..+..+++|+.|+|++|++++.++.. ..+++|+.|++++|++.|.+|
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999999877778899999999999999999988864 789999999999999999876
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.81 E-value=2.5e-20 Score=186.87 Aligned_cols=138 Identities=30% Similarity=0.528 Sum_probs=111.2
Q ss_pred cEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEecc
Q 007959 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (583)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 152 (583)
+|+.|+|++|++++.+|..+..++ |++|+|++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 555566666666555555555555 66666666666666677777778888888888888765555 7788899999999
Q ss_pred CCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCcccccc
Q 007959 153 SNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQINVTC 213 (583)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~~~c 213 (583)
+|+|++.+|..+..+++|+.|+|++|++++.+|....+++|+.+++.+|+++||.|+. .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9999988999999999999999999999999998889999999999999999998876 45
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=2.7e-20 Score=172.55 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=128.5
Q ss_pred CCccceeEeCC----------CCcEEEEecCCCCCcccccc-cccCCCCCceEEccCCccCCCCCCCcCcccccceeecc
Q 007959 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISA-DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (583)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 128 (583)
.|.|..+.|+. ..+++.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 36788888863 24899999999999976664 59999999999999999998889999999999999999
Q ss_pred cccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCc
Q 007959 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
+|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+.......++...+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888999999999999999999988999999999999999999999876533222234445666777778766
Q ss_pred cc
Q 007959 209 IN 210 (583)
Q Consensus 209 ~~ 210 (583)
..
T Consensus 167 ~~ 168 (192)
T 1w8a_A 167 SK 168 (192)
T ss_dssp TT
T ss_pred hH
Confidence 43
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.80 E-value=2e-19 Score=176.35 Aligned_cols=138 Identities=25% Similarity=0.216 Sum_probs=108.9
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 45777777777777766666677778888888888888766666778888888888888888865556678888888888
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCc
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (583)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|||.|+|+
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 8888888766667888888888888888888877653 678888888888888888875
No 274
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=4.3e-19 Score=173.96 Aligned_cols=132 Identities=23% Similarity=0.258 Sum_probs=101.5
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 35777888888888666667888888888888888888555555677888888888888888666666778888888888
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (583)
++|++++..+..|..+++|++|+|++|+|++.++.. ..+++|+.|++++|+.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 888888766777788888888888888888776653 6778888888888764
No 275
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.1e-19 Score=176.74 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=105.5
Q ss_pred CCccceeeecCceEEEEEEE-cCCcE--EEEEeecccchh------------------------hHHHHHHHHHHHHhCC
Q 007959 309 LDDDHIIGSGGFGTVYKLAM-DDGNV--FALKRIDKLNEG------------------------FDRFFERELEILGSIK 361 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 361 (583)
|+..+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999988 68888 999987542111 1236889999999998
Q ss_pred CCce--eeeeeeeeCCCceEEEEEcCCC-C----chhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeeecCC
Q 007959 362 HRYL--VNLRGYCNSPTSKLLIYDFLPG-G----SLDEALHERSEQLDWDARLNIIMGAAKGLAYLH-HDCSPRIIHRDI 433 (583)
Q Consensus 362 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~dl 433 (583)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.+|.||| +. +|+||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence 8764 333332 356899999942 4 66665432 234567889999999999999 54 9999999
Q ss_pred CCCCeEecCCCcEEEeecCcccccC
Q 007959 434 KSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 434 k~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
||.|||++. .++|+|||++....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999997543
No 276
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=185.14 Aligned_cols=139 Identities=20% Similarity=0.206 Sum_probs=85.2
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
..+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 34566666666666655555566666666666666666644445566666666666666666655566666666666666
Q ss_pred ccCCcCCCCCCccc---cccCCCCEEEeccCcCcccCCCC-ccccC--CCccccccCCCCCCCcc
Q 007959 151 ISSNSLSDYIPPSL---GKLQRLITFNVSNNFLVGAIPSD-GVLTK--FSESSFFGNRGLCGKQI 209 (583)
Q Consensus 151 l~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~~~~~~-~~l~~--l~~l~l~~N~~~c~~~~ 209 (583)
|++|+|+++.+..| ..+++|+.|+|++|+|+.+++.. ..+++ ++.|+|.+|||.|+|.+
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 66666665333333 45666666666666666554322 34444 36788899999998875
No 277
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.78 E-value=6.7e-19 Score=160.94 Aligned_cols=129 Identities=19% Similarity=0.191 Sum_probs=110.0
Q ss_pred EecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcC
Q 007959 77 LSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSL 156 (583)
Q Consensus 77 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 156 (583)
+++++|+++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 12 l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 344567777 456444 37899999999999976667789999999999999999977677789999999999999999
Q ss_pred CCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCc
Q 007959 157 SDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~ 208 (583)
++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|.++
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9877777899999999999999999888765 778999999999999999876
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.78 E-value=2.8e-19 Score=176.79 Aligned_cols=140 Identities=21% Similarity=0.193 Sum_probs=106.8
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 35677777777777766666777777777777777777755555677777888888888877755555677788888888
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCccc
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
|++|++++..|..|..+++|+.|+|++|++++.++. +..+++|+.|++++|++.|+|++.
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 888888877777888888888888888888877654 367788888888888888887753
No 279
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.77 E-value=8.2e-19 Score=185.39 Aligned_cols=138 Identities=22% Similarity=0.180 Sum_probs=131.3
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 58999999999999999999999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCcc
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~ 209 (583)
++|+|++..|..|..+++|++|+|++|+|++.++.. ..+++|+.|++++|++.|+||.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999988999999999999999999999988765 7899999999999999999983
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.76 E-value=1.6e-18 Score=190.93 Aligned_cols=133 Identities=20% Similarity=0.174 Sum_probs=121.9
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.++++|||++|+|++..+..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 58999999999999877789999999999999999999777888999999999999999999777788999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccC-CC-CccccCCCccccccCCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI-PS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~-~~~l~~l~~l~l~~N~~~ 204 (583)
++|+|+++.+..|+++++|++|+|++|.+++.. |. ...+++|+.|++++|+..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 999999877788999999999999999998753 33 378999999999999864
No 281
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.76 E-value=1.5e-18 Score=173.30 Aligned_cols=139 Identities=18% Similarity=0.211 Sum_probs=109.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCC-CCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG-EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
.++|+.|+|++|.+++..+..|.++++|++|+|++|.+++ .+|..|..+++|++|+|++|+|++..|..|..+++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 4577778888888877777777888888888888888875 467778888888888888888887777788888888888
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccc-cCCCccccccCCCCCCCcc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVL-TKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l-~~l~~l~l~~N~~~c~~~~ 209 (583)
+|++|+|++..+..+..+++|+.|+|++|++++.++.. ..+ ++|+.|++++|++.|+|++
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 88888888766667888888888888888888776644 555 4788888888888887764
No 282
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=2e-18 Score=156.37 Aligned_cols=131 Identities=24% Similarity=0.273 Sum_probs=119.5
Q ss_pred CCcEEEEecCCCCCc-ccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLS-GPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
.++|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 368999999999998 78898999999999999999999955 789999999999999999997799989999999999
Q ss_pred eccCCcCCCCCC-ccccccCCCCEEEeccCcCcccCC----CCccccCCCccccccCCC
Q 007959 150 DISSNSLSDYIP-PSLGKLQRLITFNVSNNFLVGAIP----SDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 150 ~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~----~~~~l~~l~~l~l~~N~~ 203 (583)
+|++|+|++..+ ..+..+++|+.|++++|++++.++ .+..+++|+.|++.+|+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 999999997422 789999999999999999998887 458899999999999974
No 283
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.7e-18 Score=160.50 Aligned_cols=123 Identities=22% Similarity=0.298 Sum_probs=111.0
Q ss_pred CccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccc
Q 007959 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSN 130 (583)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 130 (583)
|.|..+.|+. ..+|+.|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4566677753 358999999999999 78899999999999999999999888888999999999999999
Q ss_pred cccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccC
Q 007959 131 YLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI 184 (583)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 184 (583)
+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++....
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888889999999999999999999866778999999999999999998643
No 284
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.74 E-value=5.2e-18 Score=166.77 Aligned_cols=138 Identities=23% Similarity=0.249 Sum_probs=96.1
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccccccccc-CChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGS-IPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 149 (583)
.++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++. +|..|.++++|+.|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred CcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 45677777777777766666677777777777777777755555677777777777777777653 46777777777777
Q ss_pred eccCCcCCCCCCccccccC---------------------------CCCEEEeccCcCcccCCCC-ccccCCCccccccC
Q 007959 150 DISSNSLSDYIPPSLGKLQ---------------------------RLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~---------------------------~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (583)
+|++|+|++..+..+..++ +|+.|+|++|+|++.++.. ..+++|+.|++++|
T Consensus 155 ~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred ECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 7777777665444443322 5667777777777766654 66788888888888
Q ss_pred CCCCCCc
Q 007959 202 RGLCGKQ 208 (583)
Q Consensus 202 ~~~c~~~ 208 (583)
++.|+|+
T Consensus 235 ~~~c~c~ 241 (276)
T 2z62_A 235 PWDCSCP 241 (276)
T ss_dssp CBCCCTT
T ss_pred cccccCC
Confidence 8888876
No 285
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=2.8e-18 Score=188.16 Aligned_cols=140 Identities=18% Similarity=0.126 Sum_probs=129.2
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCC-CCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG-EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
.++|+.|+|++|.+++..|..+.++++|++|+|++|++++ .+|..|.++++|++|+|++|++++..|..|.++++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 5689999999999998888899999999999999999997 478899999999999999999998889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCcccc-CCCccccccCCCCCCCccc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLT-KFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~-~l~~l~l~~N~~~c~~~~~ 210 (583)
+|++|++++..|..|..+++|+.|+|++|+|+.+++.+..++ +|+.+++++||+.|+|++.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 999999999889999999999999999999998887777786 5999999999999999874
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.73 E-value=4.4e-18 Score=187.37 Aligned_cols=140 Identities=18% Similarity=0.212 Sum_probs=129.1
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCcc-CCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNF-YGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..+++.++++.|.+++..+..+..+++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 46789999999999988899999999999999999985 44678899999999999999999999999999999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccc-cCCCccccccCCCCCCCccc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVL-TKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l-~~l~~l~l~~N~~~c~~~~~ 210 (583)
+|++|+|++..|..|.++++|+.|+|++|+|++.+|.. ..+ ++|+.|++++|||.|+|.+.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 99999999988889999999999999999999998865 556 68999999999999999864
No 287
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.73 E-value=5.2e-18 Score=178.43 Aligned_cols=138 Identities=25% Similarity=0.266 Sum_probs=113.9
Q ss_pred CCcEEEEecCCCCCcccccc-------------------------cccCCCCCceEEccCCccCCCCCCCcCccccccee
Q 007959 71 NKRVITLSLTNHKLSGPISA-------------------------DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (583)
.++|+.|+|++|.|+...+. .|.++++|++|+|++|+|+ .+| .+..+++|++|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 212 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDEL 212 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEE
Confidence 45777888888777744433 3555666777777777776 555 47778888888
Q ss_pred ecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCC
Q 007959 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 126 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++|||.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88889998888889999999999999999999888889999999999999999999988765 78999999999999999
Q ss_pred CCCccc
Q 007959 205 CGKQIN 210 (583)
Q Consensus 205 c~~~~~ 210 (583)
|+|.+.
T Consensus 293 CdC~l~ 298 (440)
T 3zyj_A 293 CNCDIL 298 (440)
T ss_dssp CSSTTH
T ss_pred CCCCch
Confidence 999764
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.73 E-value=2.5e-18 Score=152.31 Aligned_cols=128 Identities=21% Similarity=0.273 Sum_probs=116.1
Q ss_pred CCcEEEEecCCCCCc-ccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLS-GPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
.++++.|++++|+++ +.+|..+..+++|++|+|++|+|++. ..+.++++|++|+|++|.|++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 368999999999999 88999999999999999999999955 689999999999999999997799989999999999
Q ss_pred eccCCcCCCC-CCccccccCCCCEEEeccCcCcccCC----CCccccCCCcccccc
Q 007959 150 DISSNSLSDY-IPPSLGKLQRLITFNVSNNFLVGAIP----SDGVLTKFSESSFFG 200 (583)
Q Consensus 150 ~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~----~~~~l~~l~~l~l~~ 200 (583)
+|++|+|++. .+..+..+++|++|++++|++++.++ ....+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999973 34889999999999999999999877 347889999998863
No 289
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.72 E-value=1.3e-17 Score=163.91 Aligned_cols=132 Identities=19% Similarity=0.153 Sum_probs=116.4
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57999999999999777778999999999999999999777778999999999999999999877788999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCccc--CCCCccccCCCccccccCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGA--IPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~l~~l~~l~l~~N~~ 203 (583)
++|++++..+..+..+++|++|+|++|++++. +..+..+++|+.|++++|+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 99999987777899999999999999999874 33458889999999999864
No 290
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.72 E-value=1.1e-17 Score=176.67 Aligned_cols=138 Identities=23% Similarity=0.234 Sum_probs=116.5
Q ss_pred CCcEEEEecCCCCCccccccc-------------------------ccCCCCCceEEccCCccCCCCCCCcCccccccee
Q 007959 71 NKRVITLSLTNHKLSGPISAD-------------------------LGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (583)
.++|++|+|++|.|+...+.. |.++++|++|+|++|+|+ .+| .+..+++|++|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEE
Confidence 468888888888887544433 555667777777777777 444 47788888899
Q ss_pred ecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCC
Q 007959 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 126 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|||.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999888999999999999999999999988999999999999999999999888765 78999999999999999
Q ss_pred CCCccc
Q 007959 205 CGKQIN 210 (583)
Q Consensus 205 c~~~~~ 210 (583)
|+|.+.
T Consensus 304 CdC~~~ 309 (452)
T 3zyi_A 304 CDCDIL 309 (452)
T ss_dssp CSTTTH
T ss_pred CCCCch
Confidence 999864
No 291
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.72 E-value=4.4e-18 Score=161.25 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=109.2
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 45789999999999998888899999999999999999998888889999999999999999998889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIP 185 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 185 (583)
+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999889999999999999999999987654
No 292
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=2.4e-17 Score=162.80 Aligned_cols=133 Identities=21% Similarity=0.192 Sum_probs=107.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccccc-ccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNY-LSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 149 (583)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4578888888888887666778888888888888888887767788888888888888886 776667778888888888
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRG 203 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~ 203 (583)
+|++|++++..|..|..+++|++|+|++|++++.++. +..+++|+.|++++|..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 8888888877777788888888888888888877765 46788888888888864
No 293
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.70 E-value=1.6e-17 Score=175.54 Aligned_cols=146 Identities=17% Similarity=0.183 Sum_probs=128.8
Q ss_pred CCCccce--eEeCC---------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCC-CCCcCcccccceee
Q 007959 59 DPCNWKG--VKCDK---------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEI-PSELGNCTELQGLS 126 (583)
Q Consensus 59 ~~c~w~g--v~c~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 126 (583)
+.|.|.+ |.|+. .++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566655 77763 257999999999999888999999999999999999998655 56799999999999
Q ss_pred cccccccccCChhhhccCCCceEeccCCcCCCCCCcc--ccccCCCCEEEeccCcCcccCCC--CccccCCCccccccCC
Q 007959 127 LQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPS--LGKLQRLITFNVSNNFLVGAIPS--DGVLTKFSESSFFGNR 202 (583)
Q Consensus 127 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~--~~~l~~l~~l~l~~N~ 202 (583)
|++|++++..|..|.++++|++|+|++|++++..|.. |..+++|++|+|++|++++..|. +..+++|+.|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999755544 99999999999999999998775 5789999999999998
Q ss_pred CC
Q 007959 203 GL 204 (583)
Q Consensus 203 ~~ 204 (583)
..
T Consensus 166 l~ 167 (455)
T 3v47_A 166 VK 167 (455)
T ss_dssp BS
T ss_pred cc
Confidence 54
No 294
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=4.7e-17 Score=161.00 Aligned_cols=130 Identities=23% Similarity=0.212 Sum_probs=75.7
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.|++..+ . ..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 3455555555555553222 1 45555666666666665 5555566666666666666666655555566666666666
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (583)
|++|+|++..+..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|+.
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcC
Confidence 6666666555555566666666666666666555543 4566666666666653
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.70 E-value=5.2e-17 Score=159.22 Aligned_cols=132 Identities=25% Similarity=0.280 Sum_probs=120.9
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.+++ + ..+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5789999999999995 3 4789999999999999999977777799999999999999999987788899999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
|++|+|++..+..|..+++|+.|+|++|++++.++.. ..+++|+.|++++|+..
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999877788899999999999999999988865 78999999999999754
No 296
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=1.6e-17 Score=167.36 Aligned_cols=132 Identities=21% Similarity=0.322 Sum_probs=117.9
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhc--------
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGN-------- 142 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-------- 142 (583)
.++|++|+|++|.++ .+|..++++++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 468999999999999 88989999999999999999999 88889999999999999999888888887765
Q ss_pred -cCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCC
Q 007959 143 -LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 143 -l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (583)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++++++.+..+++|+.|++++|+...
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~ 243 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALR 243 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchh
Confidence 899999999999999 58888999999999999999999888777889999999999987654
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.70 E-value=2.5e-17 Score=167.98 Aligned_cols=145 Identities=23% Similarity=0.250 Sum_probs=124.5
Q ss_pred CCCCccceeEeCC------------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCccccccee
Q 007959 58 PDPCNWKGVKCDK------------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGL 125 (583)
Q Consensus 58 ~~~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 125 (583)
..+|.|.|+ |+. .++|++|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 456777776 531 3589999999999997777789999999999999999998778889999999999
Q ss_pred ecccccccccCChhhhccCCCceEeccCCcCCCCCC-ccccccCCCCEEEeccC-cCcccCCC-CccccCCCccccccCC
Q 007959 126 SLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIP-PSLGKLQRLITFNVSNN-FLVGAIPS-DGVLTKFSESSFFGNR 202 (583)
Q Consensus 126 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~-~~~l~~l~~l~l~~N~ 202 (583)
+|++|+|++..+..|.++++|++|+|++|++++..+ ..+..+++|++|++++| .++..++. +..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999996555569999999999999999997444 48999999999999999 57777654 4889999999999997
Q ss_pred C
Q 007959 203 G 203 (583)
Q Consensus 203 ~ 203 (583)
.
T Consensus 186 l 186 (353)
T 2z80_A 186 L 186 (353)
T ss_dssp C
T ss_pred c
Confidence 4
No 298
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.70 E-value=6.7e-17 Score=153.05 Aligned_cols=133 Identities=17% Similarity=0.218 Sum_probs=118.4
Q ss_pred eeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccC
Q 007959 65 GVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS 144 (583)
Q Consensus 65 gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 144 (583)
+..|.. ..+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.+++
T Consensus 8 ~C~C~~----~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 80 (220)
T 2v9t_B 8 ACTCSN----NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR 80 (220)
T ss_dssp TSEEET----TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS
T ss_pred CCEECC----CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc
Confidence 456642 46899999999 6777664 7999999999999977777899999999999999999988899999999
Q ss_pred CCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCC
Q 007959 145 NLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++|+|+.+.+..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++|+..
T Consensus 81 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 81 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 9999999999999876777899999999999999999997754 88999999999999753
No 299
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.69 E-value=1.8e-17 Score=166.29 Aligned_cols=144 Identities=24% Similarity=0.277 Sum_probs=110.4
Q ss_pred ccceeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCc-CcccccceeecccccccccCChhh
Q 007959 62 NWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSEL-GNCTELQGLSLQSNYLSGSIPSEL 140 (583)
Q Consensus 62 ~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~ 140 (583)
...++.+...++|+.|+|++|++++..+..+..+++|++|+|++|+|++..|..+ ..+++|++|+|++|+|++. |. .
T Consensus 110 ~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~ 187 (317)
T 3o53_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (317)
T ss_dssp CCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred ccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-c
Confidence 3445555556678888888888887667778888888888888888886666665 3678888888888888844 33 3
Q ss_pred hccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCc
Q 007959 141 GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
..+++|++|+|++|+|++ +|..+..+++|+.|+|++|+|+.+++....+++|+.|++++|++.|++.
T Consensus 188 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 188 VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHH
T ss_pred cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCH
Confidence 347888888888888886 5555888888888888888888877777778888888888888887643
No 300
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.69 E-value=6.8e-17 Score=154.06 Aligned_cols=136 Identities=20% Similarity=0.195 Sum_probs=120.7
Q ss_pred ccceeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhh
Q 007959 62 NWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELG 141 (583)
Q Consensus 62 ~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 141 (583)
.|..-.|+ .+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.
T Consensus 13 ~~~~~~Cs----~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 13 CPSQCSCS----GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CCTTCEEE----TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCCEEe----CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 34556774 346999999999 6776554 8999999999999988899999999999999999999966667789
Q ss_pred ccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 142 NLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 142 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
.+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+.++..+..+++|+.|++++|+..
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCC
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCC
Confidence 999999999999999987777899999999999999999988777899999999999999754
No 301
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.69 E-value=4.5e-17 Score=178.56 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=119.8
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 36899999999999988888999999999999999999987788899999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcc--cCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG--AIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|++++..+..++++++|++|+|++|.+++ ++..+..+++|+.|++++|...
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~ 166 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce
Confidence 99999998777889999999999999999986 3444688999999999999754
No 302
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.69 E-value=3.2e-17 Score=157.47 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=118.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCc-cCCCCCCCcCcccccceeeccc-ccccccCChhhhccCCCce
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNN-FYGEIPSELGNCTELQGLSLQS-NYLSGSIPSELGNLSNLLN 148 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~ 148 (583)
..+++.|+|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3589999999999997777799999999999999997 8866666899999999999999 9999777788999999999
Q ss_pred EeccCCcCCCCCCccccccCCCC---EEEeccC-cCcccCCC-CccccCCC-ccccccCCCC
Q 007959 149 LDISSNSLSDYIPPSLGKLQRLI---TFNVSNN-FLVGAIPS-DGVLTKFS-ESSFFGNRGL 204 (583)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~-~~~l~~l~-~l~l~~N~~~ 204 (583)
|+|++|++++ +|. |..+++|+ .|++++| +++++++. +..+++|+ .|++++|...
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 9999999997 666 88888888 9999999 99988876 47899999 9999999753
No 303
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.69 E-value=5.4e-17 Score=172.53 Aligned_cols=134 Identities=22% Similarity=0.189 Sum_probs=115.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
..+++.|+|++|+|++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35788999999999987788899999999999999999977788899999999999999999866666788899999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
|++|++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|++++|+..
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 999999888888888999999999999999887764 477888999999888653
No 304
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=3.3e-17 Score=177.42 Aligned_cols=144 Identities=24% Similarity=0.229 Sum_probs=126.8
Q ss_pred CCccceeEeCC------------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeec
Q 007959 60 PCNWKGVKCDK------------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSL 127 (583)
Q Consensus 60 ~c~w~gv~c~~------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 127 (583)
.|.|.|+ |+. .++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888887 752 258999999999999888899999999999999999999888889999999999999
Q ss_pred ccccccccCChhhhccCCCceEeccCCcCCCC-CCccccccCCCCEEEeccCc-CcccCC-CCccccCCCccccccCCCC
Q 007959 128 QSNYLSGSIPSELGNLSNLLNLDISSNSLSDY-IPPSLGKLQRLITFNVSNNF-LVGAIP-SDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 128 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~-l~~~~~-~~~~l~~l~~l~l~~N~~~ 204 (583)
++|++++..|..|+++++|++|+|++|++++. .|..+.++++|++|++++|+ +..+++ .+..+++|+.|++++|...
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99999987778899999999999999999963 57789999999999999998 454543 4588999999999999753
No 305
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=5.8e-17 Score=150.76 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=107.4
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|++++|.++ .+ ..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 468899999999776 33 4788899999999999999877888899999999999999999987888899999999999
Q ss_pred ccCCc-CCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNS-LSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|+ ++. +| .+..+++|+.|++++|++++.+ .+..+++|+.|++++|+.
T Consensus 143 L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 143 LSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC--
T ss_pred ccCCCCccc-cH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCccc
Confidence 99998 664 55 6888999999999999998755 667888999999999874
No 306
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.68 E-value=3e-17 Score=179.92 Aligned_cols=139 Identities=22% Similarity=0.191 Sum_probs=117.9
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCC---CCCCcCcccccceeecccccccccCChhhhccCCCc
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE---IPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL 147 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 147 (583)
.++|+.|+|++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|.++++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 46788888888888877777888888888888888888752 235678888888888888888888888899999999
Q ss_pred eEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCccc
Q 007959 148 NLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 148 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
.|+|++|++++..|..+..+++| .|+|++|++++.++.. ..+++|+.+++++||+.|+|+..
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 99999999998888899999999 9999999999888765 78899999999999999998853
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.68 E-value=8.4e-17 Score=169.21 Aligned_cols=134 Identities=15% Similarity=0.100 Sum_probs=111.1
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 35788899999999987778899999999999999999877778899999999999999999966666789999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEecc-CcCcccCCC-CccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSN-NFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
|++|+|+...+..|..+++|+.|+|++ |.+..+++. +..+++|+.|++++|...
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 999999877777888888888888888 445544443 377888888888888643
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=9.4e-17 Score=169.44 Aligned_cols=142 Identities=15% Similarity=0.142 Sum_probs=123.7
Q ss_pred cceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccc
Q 007959 63 WKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYL 132 (583)
Q Consensus 63 w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 132 (583)
|..|.|.. .++++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 45677752 35899999999999988899999999999999999999988889999999999999999999
Q ss_pred cccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEecc-CcCcccCCC-CccccCCCccccccCCCC
Q 007959 133 SGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSN-NFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 133 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++ |.+..+++. +..+++|+.|++++|...
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 977777799999999999999999987777899999999999998 556555554 478899999999998754
No 309
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.68 E-value=4.7e-17 Score=180.88 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=118.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCC--------CCcCcccccceeecccccccccCChhhhc
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP--------SELGNCTELQGLSLQSNYLSGSIPSELGN 142 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 142 (583)
.++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.+
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 4678899999999997777788899999999999999885322 23788899999999999999544456899
Q ss_pred cCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-c-cccCCCccccccCCCCCCCcc
Q 007959 143 LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-G-VLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~l~~l~~l~l~~N~~~c~~~~ 209 (583)
+++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++.++.. . .+++|+.+++++|||.|+|++
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999999877777899999999999999999888764 3 689999999999999999985
No 310
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.68 E-value=5.8e-17 Score=175.95 Aligned_cols=137 Identities=23% Similarity=0.236 Sum_probs=91.4
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCC--CCCCCcCcccccceeeccccccc---------------
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG--EIPSELGNCTELQGLSLQSNYLS--------------- 133 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~--------------- 133 (583)
.++|+.|+|++|++++.+|..+.++++|++|+|++|+|++ .+|..|.++++|++|+|++|+++
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 3455555555555554455555555555555555555543 11233444455555555555544
Q ss_pred ----------ccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCC
Q 007959 134 ----------GSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNR 202 (583)
Q Consensus 134 ----------~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~ 202 (583)
+.+|..+. ++|+.|+|++|+|+. +|..+..+++|+.|+|++|+|+.+++. +..+++|+.|++++|+
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 43333322 578888888888884 777777999999999999999988877 6889999999999999
Q ss_pred CCCCCccc
Q 007959 203 GLCGKQIN 210 (583)
Q Consensus 203 ~~c~~~~~ 210 (583)
|.|+|++.
T Consensus 509 ~~c~c~~~ 516 (562)
T 3a79_B 509 WDCTCPGI 516 (562)
T ss_dssp BCCCHHHH
T ss_pred cCCCcchH
Confidence 99998864
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.68 E-value=5.4e-17 Score=176.50 Aligned_cols=139 Identities=19% Similarity=0.218 Sum_probs=119.8
Q ss_pred CCcEEEEecCCCCCccccc-ccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccccccc-ccCChhhhccCCCce
Q 007959 71 NKRVITLSLTNHKLSGPIS-ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLS-GSIPSELGNLSNLLN 148 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~ 148 (583)
.++|+.|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ +.+|..|..+++|+.
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 3566777777777775555 46788888888888888888888888899999999999999997 578888999999999
Q ss_pred EeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCcc
Q 007959 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~ 209 (583)
|+|++|++++..|..|..+++|+.|+|++|++++.++.. ..+++|+.|++++|++.|+||.
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999888999999999999999999999988764 7899999999999999998875
No 312
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.68 E-value=6.5e-17 Score=147.50 Aligned_cols=128 Identities=18% Similarity=0.132 Sum_probs=111.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCC-CCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLD-QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..+|+.|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 468999999999999 4555 55554 999999999999954 689999999999999999996655667999999999
Q ss_pred eccCCcCCCCCCc--cccccCCCCEEEeccCcCcccCCC----CccccCCCccccccCCC
Q 007959 150 DISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPS----DGVLTKFSESSFFGNRG 203 (583)
Q Consensus 150 ~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~l~~l~~l~l~~N~~ 203 (583)
+|++|+|+. +|. .+..+++|+.|++++|+++..+.. ...+++|+.|++++|+.
T Consensus 94 ~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 999999985 665 899999999999999999977664 58899999999999863
No 313
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.67 E-value=1.3e-16 Score=144.54 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=96.4
Q ss_pred EEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCC
Q 007959 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (583)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (583)
+.|++++|+|+ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46788899999 577666 389999999999999888888999999999999999999777777899999999999999
Q ss_pred cCCCCCCccccccCCCCEEEeccCcCcccCCCC
Q 007959 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD 187 (583)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 187 (583)
+|+++.+..|..+++|+.|+|++|+++...+.+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 999877778999999999999999998776544
No 314
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=4.9e-17 Score=180.86 Aligned_cols=174 Identities=20% Similarity=0.183 Sum_probs=114.7
Q ss_pred CCcchHHHHHHHHHhccCC-CCCCCCCCCCCCCCCccceeEeCCCCcE------------------EEEecCCCCCcc--
Q 007959 28 AINSDGEALLSFRTAVVSS-DGFLNQWRPEDPDPCNWKGVKCDKNKRV------------------ITLSLTNHKLSG-- 86 (583)
Q Consensus 28 ~~~~~~~~L~~~~~~~~~~-~~~~~~w~~~~~~~c~w~gv~c~~~~~l------------------~~L~L~~n~l~~-- 86 (583)
....+.++|+++....... ......|.......+.|.++.++. +++ ..++|+.|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 3467788899998776322 122345654445566787776653 223 334444444432
Q ss_pred -------cccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCC
Q 007959 87 -------PISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDY 159 (583)
Q Consensus 87 -------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 159 (583)
..++.|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 34677889999999999999999 78888889999999999999999 89999999999999999999999 5
Q ss_pred CCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCC
Q 007959 160 IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 160 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (583)
+|..|..|++|++|+|++|.|+.++..+..+++|+.|+|++|+...
T Consensus 285 lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 285 LPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCS
T ss_pred cChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCC
Confidence 8999999999999999999999887778999999999999998753
No 315
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.67 E-value=5.8e-17 Score=174.29 Aligned_cols=135 Identities=24% Similarity=0.235 Sum_probs=87.8
Q ss_pred cEEEEecCCCCCcc--cccccccCCCCCceEEccCCccCCCCCC-CcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 73 RVITLSLTNHKLSG--PISADLGKLDQLKFLNLHSNNFYGEIPS-ELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 73 ~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
+|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|
T Consensus 349 ~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L 426 (520)
T 2z7x_B 349 ELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVL 426 (520)
T ss_dssp SCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEE
T ss_pred CCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEE
Confidence 44444444444443 2233344444444444444444432332 244445555555555555444444332 678888
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCccc
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
+|++|+|+ .+|..+..+++|+.|+|++|+|+.+++. +..+++|+.|++++|++.|+|++.
T Consensus 427 ~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 487 (520)
T 2z7x_B 427 DLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487 (520)
T ss_dssp ECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred ECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCch
Confidence 88888888 4787778999999999999999987776 578999999999999999998864
No 316
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.67 E-value=1e-16 Score=182.17 Aligned_cols=136 Identities=22% Similarity=0.238 Sum_probs=117.5
Q ss_pred CCcEEEEecCCCCCcccccc-cccCCCCCceEEccCCccC-----CCCCCCcCcccccceeecccccccccCChhhhccC
Q 007959 71 NKRVITLSLTNHKLSGPISA-DLGKLDQLKFLNLHSNNFY-----GEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS 144 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 144 (583)
.++|+.|+|++|++++..+. .+..+++|++|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.+++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 46788888888888855443 4667889999999999987 44556789999999999999999988889999999
Q ss_pred CCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCCCccc
Q 007959 145 NLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 145 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
+|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|.. +.+|+.+++++|||.|+|++.
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSCC
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccccH
Confidence 999999999999987666665 89999999999999998864 668999999999999999863
No 317
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=7e-17 Score=176.49 Aligned_cols=133 Identities=20% Similarity=0.135 Sum_probs=114.4
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+++.|++++|.++...+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 56788999999998666666888999999999999999777778999999999999999999888888899999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
++|.|++..+..|.++++|++|+|++|.|++.++. +..+++|+.|++++|...
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 99999976666678999999999999999988875 478899999999998753
No 318
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.67 E-value=6.6e-17 Score=167.18 Aligned_cols=133 Identities=20% Similarity=0.135 Sum_probs=118.1
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+++.|++++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 67899999999999555556889999999999999999777779999999999999999999888888999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
++|+|+...+..|..+++|++|+|++|++++.++. +..+++|+.|++++|+..
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 99999975555679999999999999999988776 488999999999999754
No 319
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.66 E-value=1.6e-16 Score=174.05 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=123.8
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
+.+++.|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 35899999999999988899999999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccC-CCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAI-PSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|+|++..|..+.++++|++|+|++|++++.. +....+++|+.|++++|+..
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 166 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH 166 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc
Confidence 9999999877888999999999999999999854 55566999999999999764
No 320
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.66 E-value=1.6e-16 Score=180.69 Aligned_cols=143 Identities=22% Similarity=0.219 Sum_probs=123.0
Q ss_pred CccceeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCC-CCCcCcccccceeecccccccccCChh
Q 007959 61 CNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEI-PSELGNCTELQGLSLQSNYLSGSIPSE 139 (583)
Q Consensus 61 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 139 (583)
|+|+.|.+ -+++|+.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 56777777 6789999999999999888889999999999999999666566 778999999999999999999888999
Q ss_pred hhccCCCceEeccCCcCCCCCCcc--ccccCCCCEEEeccCcCcccCCC--CccccCCCccccccCCCC
Q 007959 140 LGNLSNLLNLDISSNSLSDYIPPS--LGKLQRLITFNVSNNFLVGAIPS--DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 140 ~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~--~~~l~~l~~l~l~~N~~~ 204 (583)
|.++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+. +..+++|+.|++++|...
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 999999999999999998766654 88999999999999999887653 478899999999998754
No 321
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.66 E-value=1.5e-16 Score=149.36 Aligned_cols=129 Identities=21% Similarity=0.200 Sum_probs=114.5
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 35789999999999997777778999999999999999997666678999999999999999997777779999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++..+..|..+++|+.|+|++|.+.+. +++|+.|++.+|...
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHS 178 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCT
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecC------CCCHHHHHHHHHhCC
Confidence 9999999987777799999999999999988764 457788888888654
No 322
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=1.8e-16 Score=144.76 Aligned_cols=127 Identities=22% Similarity=0.263 Sum_probs=113.6
Q ss_pred CCccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccc
Q 007959 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (583)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 129 (583)
.|.|.++.|+. .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 36899999964 35899999999999977777889999999999999999976667789999999999999
Q ss_pred ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC
Q 007959 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS 186 (583)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 186 (583)
|+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999977777789999999999999999987666789999999999999999987653
No 323
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.66 E-value=3e-16 Score=142.68 Aligned_cols=110 Identities=21% Similarity=0.223 Sum_probs=95.9
Q ss_pred EEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCC
Q 007959 75 ITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (583)
Q Consensus 75 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (583)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999998 6777664 89999999999999888889999999999999999999766666899999999999999
Q ss_pred cCCCCCCccccccCCCCEEEeccCcCcccCCCC
Q 007959 155 SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD 187 (583)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 187 (583)
+|+++.+..|..+++|++|+|++|++...++.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 999866667999999999999999998776544
No 324
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.65 E-value=3.8e-16 Score=141.43 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=98.1
Q ss_pred CCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEec
Q 007959 97 QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVS 176 (583)
Q Consensus 97 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 176 (583)
..+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 6887664 889999999999998888999999999999999999998777788999999999999
Q ss_pred cCcCcccCCC-CccccCCCccccccCCCCCCCc
Q 007959 177 NNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 177 ~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
+|+|+++++. +..+++|+.|+|++|++.|.|+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998886 5889999999999999999986
No 325
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.65 E-value=1.7e-16 Score=158.32 Aligned_cols=133 Identities=19% Similarity=0.224 Sum_probs=91.2
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCC-CCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP-SELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
.++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..|..|..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 456777777777777 455567777777777777777774433 456777777777777777776666667777777777
Q ss_pred eccCCcCCC-CCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCC
Q 007959 150 DISSNSLSD-YIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 150 ~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~ 204 (583)
+|++|.+++ .+|..+..+++|+.|+|++|++++.++. +..+++|+.|++++|+..
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 777777765 4566677777777777777777766543 356677777777777643
No 326
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.65 E-value=9.6e-17 Score=170.62 Aligned_cols=140 Identities=20% Similarity=0.136 Sum_probs=112.7
Q ss_pred CCcEEEEecCCCCCcccccccccCCC------------------------CCceEEccCCccCCCCCCCcCcccccceee
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLD------------------------QLKFLNLHSNNFYGEIPSELGNCTELQGLS 126 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~------------------------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 126 (583)
.++|+.|+|++|.+++..+..|..++ +|++|+|++|+|++..+..|.++++|+.|+
T Consensus 175 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 254 (477)
T 2id5_A 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLN 254 (477)
T ss_dssp CTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEE
T ss_pred cCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeE
Confidence 45666677777666655555555555 455555556666633335678889999999
Q ss_pred cccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCC
Q 007959 127 LQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 127 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c 205 (583)
|++|.|++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|++++|++.|
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 255 LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 9999999777788999999999999999999988999999999999999999999888764 788999999999999999
Q ss_pred CCccc
Q 007959 206 GKQIN 210 (583)
Q Consensus 206 ~~~~~ 210 (583)
+|++.
T Consensus 335 ~c~~~ 339 (477)
T 2id5_A 335 DCRLL 339 (477)
T ss_dssp SGGGH
T ss_pred ccchH
Confidence 98764
No 327
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.6e-16 Score=160.52 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=100.2
Q ss_pred cCCCccceeeecCceEEEEEEEcCCcEEEEEeecccch--------------hhHH--------HHHHHHHHHHhCCCCc
Q 007959 307 ETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNE--------------GFDR--------FFERELEILGSIKHRY 364 (583)
Q Consensus 307 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~h~n 364 (583)
.-|+..+.||+|+||.||+|...+|+.||||.++.... .... ....|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34788899999999999999999999999998653110 0011 1234666666664443
Q ss_pred eeeeeeeeeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCC
Q 007959 365 LVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNL 444 (583)
Q Consensus 365 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 444 (583)
+....-+.. ...++||||+++++|.++... .....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 322111111 223799999999888776432 12456889999999999954 999999999999998776
Q ss_pred ----------cEEEeecCcccccC
Q 007959 445 ----------EARVSDFGLAKLLE 458 (583)
Q Consensus 445 ----------~~kl~Dfgl~~~~~ 458 (583)
.+.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.64 E-value=1.6e-16 Score=147.81 Aligned_cols=128 Identities=15% Similarity=0.189 Sum_probs=115.8
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|++++|+++ .+| .+..+++|++|+|++|.++ .++ .+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 468999999999999 666 6999999999999999887 444 799999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCc-CcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNF-LVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|++++..|..+..+++|++|+|++|+ ++.. +.+..+++|+.|++++|+.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCC
Confidence 99999998788999999999999999998 6655 4678899999999999974
No 329
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.64 E-value=3.9e-16 Score=141.84 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=98.4
Q ss_pred ceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccC
Q 007959 99 KFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNN 178 (583)
Q Consensus 99 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 178 (583)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999998 7887775 89999999999999888999999999999999999999866677899999999999999
Q ss_pred cCcccCCC-CccccCCCccccccCCCCCCCc
Q 007959 179 FLVGAIPS-DGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 179 ~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
+|+++++. +..+++|+.|+|++|++.|.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99998886 5889999999999999999986
No 330
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.64 E-value=4.2e-16 Score=173.20 Aligned_cols=134 Identities=25% Similarity=0.218 Sum_probs=114.5
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
++++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35789999999999977777899999999999999999988888888999999999999999855555788999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
|++|++++..|..|.++++|++|+|++|.+++.++.. ..+++|+.|++++|...
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc
Confidence 9999998877788899999999999999998877654 77888999999888653
No 331
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.63 E-value=9.5e-16 Score=154.81 Aligned_cols=140 Identities=23% Similarity=0.273 Sum_probs=120.5
Q ss_pred CccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccc
Q 007959 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSN 130 (583)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 130 (583)
|.|..+.|+. .++++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 6899999963 247999999999999777889999999999999999999888889999999999999999
Q ss_pred cccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcc--cCCCC-ccccCCCccccccCCCC
Q 007959 131 YLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG--AIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
+++ .+|..+. ++|++|++++|+|++..+..|..+++|+.|++++|.++. ..+.. ..+ +|+.|++++|...
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999 6776654 899999999999998777789999999999999999964 44433 455 8999999998743
No 332
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.62 E-value=7.4e-16 Score=155.49 Aligned_cols=141 Identities=21% Similarity=0.288 Sum_probs=122.9
Q ss_pred CCccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccc
Q 007959 60 PCNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (583)
Q Consensus 60 ~c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 129 (583)
.|.|..+.|+. .++++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46899999963 35799999999999987777899999999999999999988899999999999999999
Q ss_pred ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcc--cCC-CCccccCCCccccccCCC
Q 007959 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVG--AIP-SDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~-~~~~l~~l~~l~l~~N~~ 203 (583)
|+|+ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++. ..+ .+..+++|+.|++++|..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999 6776654 799999999999998777789999999999999999964 434 347889999999999874
No 333
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.62 E-value=2.6e-16 Score=173.12 Aligned_cols=143 Identities=21% Similarity=0.234 Sum_probs=127.3
Q ss_pred CccceeEe--CCCCcEEEEecCCCCCccc-----------------cccccc--CCCCCceEEccCCccCCCCCCCcCcc
Q 007959 61 CNWKGVKC--DKNKRVITLSLTNHKLSGP-----------------ISADLG--KLDQLKFLNLHSNNFYGEIPSELGNC 119 (583)
Q Consensus 61 c~w~gv~c--~~~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 119 (583)
+...|+.- ...++|++|+|++|.|++. +|..++ ++++|++|+|++|++.+.+|..|.++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 34555432 2467999999999999985 999999 99999999999999999999999999
Q ss_pred cccceeeccccc-ccc-cCChhhhcc------CCCceEeccCCcCCCCCCc--cccccCCCCEEEeccCcCcccCCCCcc
Q 007959 120 TELQGLSLQSNY-LSG-SIPSELGNL------SNLLNLDISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPSDGV 189 (583)
Q Consensus 120 ~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~ 189 (583)
++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+..+++|+.|+|++|+++|.+|.+..
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~ 351 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGS 351 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCC
Confidence 999999999998 998 899998887 99999999999999 6888 899999999999999999977777788
Q ss_pred ccCCCccccccCCCC
Q 007959 190 LTKFSESSFFGNRGL 204 (583)
Q Consensus 190 l~~l~~l~l~~N~~~ 204 (583)
+++|+.|++++|...
T Consensus 352 l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 352 EIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEESEEECCSSEEE
T ss_pred CCCCCEEECCCCccc
Confidence 999999999999754
No 334
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.62 E-value=7.4e-16 Score=166.77 Aligned_cols=134 Identities=22% Similarity=0.216 Sum_probs=99.5
Q ss_pred CcEEEEecCCCCCccccc--ccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhh---------
Q 007959 72 KRVITLSLTNHKLSGPIS--ADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL--------- 140 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--------- 140 (583)
++|+.|+|++|+|++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..+
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEEC
Confidence 456666666666664322 34666777777777777777 56666777777777777777766 333221
Q ss_pred ---------hccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCCCCCCcc
Q 007959 141 ---------GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 141 ---------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~~c~~~~ 209 (583)
..+++|++|+|++|+|+. +|. ...+++|+.|+|++|+|++.++. +..+++|+.|++++|++.|+||.
T Consensus 439 s~N~l~~~~~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 439 SNNNLDSFSLFLPRLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCCChhhhcccCChhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 267888999999999984 665 56789999999999999998887 48899999999999999999883
No 335
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.61 E-value=8e-16 Score=165.94 Aligned_cols=121 Identities=24% Similarity=0.273 Sum_probs=108.8
Q ss_pred cEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEecc
Q 007959 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (583)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 152 (583)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|.++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58889999999995 676 999999999999999999 889999999999999999999995 77 79999999999999
Q ss_pred CCcCCCCC-CccccccCCCCEEEeccCcCcccCCCC----ccccCCCcccc
Q 007959 153 SNSLSDYI-PPSLGKLQRLITFNVSNNFLVGAIPSD----GVLTKFSESSF 198 (583)
Q Consensus 153 ~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~----~~l~~l~~l~l 198 (583)
+|+|++.. |..+..+++|+.|+|++|+|++.++.. ..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 999999999999999999999998865 23778887753
No 336
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.61 E-value=1.9e-15 Score=156.27 Aligned_cols=131 Identities=18% Similarity=0.112 Sum_probs=118.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 46899999999999987778999999999999999999988888899999999999999999955555579999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|++++..|..|..+++|+.|++++|++++.. ...+++|+.+++++|..
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccc
Confidence 9999999888888999999999999999999763 46788999999998864
No 337
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=165.73 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=112.5
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
..+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 45788899999999877777888999999999999998877777888899999999999999877778888999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCccc--CCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGA--IPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|++++..+..++++++|++|+|++|.+++. +..+..+++|+.|++++|+..
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 999998876666788899999999999988873 334577888999999888753
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.60 E-value=4.9e-16 Score=149.13 Aligned_cols=131 Identities=16% Similarity=0.100 Sum_probs=114.1
Q ss_pred CCCcEEEEecCCCC-CcccccccccCCCCCceEEccC-CccCCCCCCCcCcccccceeecccccccccCChhhhccCCCc
Q 007959 70 KNKRVITLSLTNHK-LSGPISADLGKLDQLKFLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL 147 (583)
Q Consensus 70 ~~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 147 (583)
..++|++|+|++|+ ++...+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 53 ~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~ 130 (239)
T 2xwt_C 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTD 130 (239)
T ss_dssp TCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCC
T ss_pred CCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccc
Confidence 35789999999997 8866667899999999999998 99996666789999999999999999995 776 88888888
Q ss_pred ---eEeccCC-cCCCCCCccccccCCCC-EEEeccCcCcccCCCCccccCCCccccccCC
Q 007959 148 ---NLDISSN-SLSDYIPPSLGKLQRLI-TFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 148 ---~L~l~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (583)
.|++++| +++++.+..|..+++|+ .|++++|+++.+++.....++|+.|++++|+
T Consensus 131 ~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99987777899999999 9999999999777765444889999999995
No 339
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=1.8e-15 Score=165.37 Aligned_cols=131 Identities=18% Similarity=0.112 Sum_probs=119.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.|++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 36899999999999988888999999999999999999988888899999999999999999966666689999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|.|++..|..|..+++|+.|+|++|.|++.+ ...+++|+.|++++|..
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcc
Confidence 9999999988889999999999999999999864 45688888888888864
No 340
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.60 E-value=1.6e-15 Score=147.64 Aligned_cols=126 Identities=24% Similarity=0.272 Sum_probs=106.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|+|++..+ +.++++|++|+|++|+|++ +|. +.. ++|+.|+|++|+|++ ++ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 5789999999999996544 8899999999999999984 554 333 899999999999994 44 588999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (583)
|++|+|++ ++ .+..+++|+.|+|++|+|++. +.+..+++|+.|++++|++.|.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 99999997 44 688999999999999999987 6668889999999999987664
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=1e-15 Score=153.10 Aligned_cols=131 Identities=20% Similarity=0.137 Sum_probs=94.7
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCC--C--CCCcCcccccceeecccccccccCCh----hhhc
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE--I--PSELGNCTELQGLSLQSNYLSGSIPS----ELGN 142 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 142 (583)
.++|++|+|++|++++..+..|.++++|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 45788888888888777777788888888888888887642 2 223467788888888888886 3443 2567
Q ss_pred cCCCceEeccCCcCCCCCCcccccc---CCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 143 LSNLLNLDISSNSLSDYIPPSLGKL---QRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
+++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+.++... .++|+.|++++|+..
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~--~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGL--PAKLRVLDLSSNRLN 285 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCC--CSCCSCEECCSCCCC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhh--cCCCCEEECCCCcCC
Confidence 7888888888888887667666666 58888888888888655444 267888888888643
No 342
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.60 E-value=5.4e-16 Score=155.19 Aligned_cols=134 Identities=18% Similarity=0.099 Sum_probs=101.9
Q ss_pred CCCcEEEEecCCCCCcccccccccCC-----CCCceEEccCCccCCCCCCCcCcccccceeeccccccccc--CChhh--
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKL-----DQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGS--IPSEL-- 140 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~-- 140 (583)
..++|+.|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. +|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 356888888888888866 7777776 8888888888888877778888888888888888887755 33344
Q ss_pred hccCCCceEeccCCcCCCC--CC-ccccccCCCCEEEeccCcCcccCC--CCccccCCCccccccCCCC
Q 007959 141 GNLSNLLNLDISSNSLSDY--IP-PSLGKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~--~~-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~~~ 204 (583)
..+++|++|+|++|+|++. ++ ..+..+++|+.|+|++|+|++.++ ....+++|+.|++++|...
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 7888888888888888741 11 334567888888888888888664 3356788888888888754
No 343
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.60 E-value=2.4e-15 Score=151.86 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=77.6
Q ss_pred cEEEEecCCCCCcccccccccCCCCCceEEccCCccC--CCCCCCcCcc--------------------cccceeecccc
Q 007959 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFY--GEIPSELGNC--------------------TELQGLSLQSN 130 (583)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l--------------------~~L~~L~L~~N 130 (583)
+|++|+|++|.+++..+..|.++++|++|+|++|.++ +..|..|..+ ++|++|+|++|
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN 203 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSS
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCC
Confidence 4555555555555444444666666666666666664 2344444433 34555555555
Q ss_pred cccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 131 YLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
.+++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|+++.++..+..+++|+.|++++|+..
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCC
Confidence 55544455566666666666666666665555666666666666666666655555566666666666666543
No 344
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.60 E-value=2.9e-15 Score=151.14 Aligned_cols=132 Identities=20% Similarity=0.188 Sum_probs=75.4
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCC--CCCCCcCcccc---------------------cceeecc
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYG--EIPSELGNCTE---------------------LQGLSLQ 128 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~---------------------L~~L~L~ 128 (583)
++|++|++++|.+++..+..|.++++|++|+|++|.++. ..+..|.++++ |++|+|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~ 200 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLD 200 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECC
Confidence 456666666666665544455555556666665555532 34444555544 4555555
Q ss_pred cccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
+|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++.++..+..+++|+.|++++|+.
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcC
Confidence 555554445556666666666666666665555556666666666666666665554555556666666666653
No 345
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.60 E-value=6.3e-16 Score=157.56 Aligned_cols=133 Identities=16% Similarity=0.145 Sum_probs=118.4
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCCh--hhhccCCCc
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPS--ELGNLSNLL 147 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~ 147 (583)
..++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .|.++++|+
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 74 RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 4579999999999999888889999999999999999999555555999999999999999999 4554 799999999
Q ss_pred eEeccCC-cCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccCCC
Q 007959 148 NLDISSN-SLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGNRG 203 (583)
Q Consensus 148 ~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N~~ 203 (583)
+|++++| .+++..+..|..+++|+.|++++|++++..+. +..+++|+.|++++|..
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 9999999 57777788999999999999999999998664 48899999999999874
No 346
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.59 E-value=1.8e-15 Score=164.16 Aligned_cols=128 Identities=20% Similarity=0.155 Sum_probs=115.1
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++++.|+|++|.|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 478999999999999888889999999999999999999888999999999999999999999 67776 899999999
Q ss_pred ccCCcCCCC-CCccccccCCCCEEEeccCcCcccCCCCccccCC--CccccccCCC
Q 007959 151 ISSNSLSDY-IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKF--SESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l--~~l~l~~N~~ 203 (583)
|++|+|++. +|..|.++++|++|+|++|++++. ....+++| +.|++++|+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccc
Confidence 999999973 468999999999999999999863 44566677 9999999976
No 347
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.59 E-value=2.9e-15 Score=148.14 Aligned_cols=125 Identities=28% Similarity=0.353 Sum_probs=97.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|++|+|++ + ..+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 4678888888888885444 7888888888888888873 44 37888888888888888884 3 3577888888888
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|+|++. ..+..+++|+.|+|++|++++.++ ...+++|+.|++++|+..
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCC
Confidence 888888864 567888888888888888887766 677788888888888643
No 348
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.59 E-value=3.7e-16 Score=156.39 Aligned_cols=134 Identities=17% Similarity=0.112 Sum_probs=112.2
Q ss_pred CCcEEEEecCCCCCcccccccc--cCCCCCceEEccCCccCCCCCCCcCcc-----cccceeecccccccccCChhhhcc
Q 007959 71 NKRVITLSLTNHKLSGPISADL--GKLDQLKFLNLHSNNFYGEIPSELGNC-----TELQGLSLQSNYLSGSIPSELGNL 143 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l 143 (583)
.++|++|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|.++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 5689999999999998888876 8999999999999999966 8888887 899999999999998887899999
Q ss_pred CCCceEeccCCcCCCC--CCccc--cccCCCCEEEeccCcCcccCC---CC-ccccCCCccccccCCCCC
Q 007959 144 SNLLNLDISSNSLSDY--IPPSL--GKLQRLITFNVSNNFLVGAIP---SD-GVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 144 ~~L~~L~l~~N~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~~~~---~~-~~l~~l~~l~l~~N~~~c 205 (583)
++|++|+|++|++.+. .|..+ ..+++|++|+|++|+|++.+. .. ..+++|+.|++++|+..-
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 9999999999998764 23344 788999999999999985332 22 456899999999997544
No 349
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.59 E-value=2.4e-15 Score=152.90 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=109.0
Q ss_pred CccceeEeCCCCcEEEEecCCC-CCcccccccccCCCCCceEEccC-CccCCCCCCCcCcccccceeecccccccccCCh
Q 007959 61 CNWKGVKCDKNKRVITLSLTNH-KLSGPISADLGKLDQLKFLNLHS-NNFYGEIPSELGNCTELQGLSLQSNYLSGSIPS 138 (583)
Q Consensus 61 c~w~gv~c~~~~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 138 (583)
|.|..|.| +++ +|+ .+|. |..+++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~-----------~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRC-----------TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEEC-----------CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEc-----------CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 77766655 455 788 5787 99999999999996 999977778899999999999999999999999
Q ss_pred hhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC--ccccCCCccccccCCCCCCCcc
Q 007959 139 ELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD--GVLTKFSESSFFGNRGLCGKQI 209 (583)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--~~l~~l~~l~l~~N~~~c~~~~ 209 (583)
.|.+|++|+.|+|++|+|+++.+..|..++ |+.|+|++|+|....... ..+.+.....+..+...|..|.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999999999999999999986666676666 999999999998654311 2222334445566777887665
No 350
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=8.4e-16 Score=172.68 Aligned_cols=142 Identities=18% Similarity=0.194 Sum_probs=124.6
Q ss_pred CccceeEe--CCCCcEEEEecCCCCCcc-----------------ccccccc--CCCCCceEEccCCccCCCCCCCcCcc
Q 007959 61 CNWKGVKC--DKNKRVITLSLTNHKLSG-----------------PISADLG--KLDQLKFLNLHSNNFYGEIPSELGNC 119 (583)
Q Consensus 61 c~w~gv~c--~~~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 119 (583)
+...|+.- ...++|+.|+|++|+|++ .+|..++ ++++|++|+|++|++.+.+|..|.++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 34555432 246799999999999998 3888887 99999999999999999999999999
Q ss_pred cccceeeccccc-ccc-cCChhhhccC-------CCceEeccCCcCCCCCCc--cccccCCCCEEEeccCcCcccCCCCc
Q 007959 120 TELQGLSLQSNY-LSG-SIPSELGNLS-------NLLNLDISSNSLSDYIPP--SLGKLQRLITFNVSNNFLVGAIPSDG 188 (583)
Q Consensus 120 ~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~ 188 (583)
++|+.|+|++|+ +++ .+|..+.+++ +|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+++. +|.+.
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-lp~~~ 592 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-LEAFG 592 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-CCCCC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-chhhc
Confidence 999999999998 998 8998888776 9999999999999 6888 89999999999999999994 44778
Q ss_pred cccCCCccccccCCCC
Q 007959 189 VLTKFSESSFFGNRGL 204 (583)
Q Consensus 189 ~l~~l~~l~l~~N~~~ 204 (583)
.+++|+.|++++|+..
T Consensus 593 ~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 593 TNVKLTDLKLDYNQIE 608 (876)
T ss_dssp TTSEESEEECCSSCCS
T ss_pred CCCcceEEECcCCccc
Confidence 8999999999999865
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.58 E-value=3.1e-15 Score=152.88 Aligned_cols=144 Identities=19% Similarity=0.118 Sum_probs=128.5
Q ss_pred CccceeEeCC----------CCcEEEEecCCCCCccccccccc-CCCCCceEEccCCccCCCCCCCcCcccccceeeccc
Q 007959 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLG-KLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQS 129 (583)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 129 (583)
|.+..+.|.. ...++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 5677788853 35688999999999987778887 999999999999999977778899999999999999
Q ss_pred ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC----ccccCCCccccccCCCC
Q 007959 130 NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD----GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 130 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~----~~l~~l~~l~l~~N~~~ 204 (583)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++.. ..+++|+.|+|++|+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999777788999999999999999999988999999999999999999999987754 46899999999999864
No 352
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=152.07 Aligned_cols=130 Identities=20% Similarity=0.215 Sum_probs=110.3
Q ss_pred CCCcEEEEecCCCCCccc--c--cccccCCCCCceEEccCCccCCCCCC----CcCcccccceeecccccccccCChhhh
Q 007959 70 KNKRVITLSLTNHKLSGP--I--SADLGKLDQLKFLNLHSNNFYGEIPS----ELGNCTELQGLSLQSNYLSGSIPSELG 141 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~ 141 (583)
..++|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .+|. .+.++++|++|+|++|+|++..|..+.
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 245 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP 245 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS
T ss_pred cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH
Confidence 357899999999998753 2 234578999999999999998 4444 257889999999999999988788877
Q ss_pred cc---CCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 142 NL---SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 142 ~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
.+ ++|++|+|++|+|+. +|..+. ++|+.|+|++|+|++.+ ....+++|+.|++++|++.
T Consensus 246 ~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 246 RCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRAP-QPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSCC-CTTSCCCCSCEECSSTTTS
T ss_pred hccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCCc-hhhhCCCccEEECcCCCCC
Confidence 77 699999999999994 777764 89999999999999874 3678899999999999864
No 353
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.58 E-value=2.7e-15 Score=149.74 Aligned_cols=129 Identities=26% Similarity=0.364 Sum_probs=101.0
Q ss_pred CCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCce
Q 007959 69 DKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLN 148 (583)
Q Consensus 69 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 148 (583)
...++|+.|+|++|.+++ ++ .+..+++|++|+|++|+|++ ++. +..+++|++|+|++|++++. +. +..+++|+.
T Consensus 82 ~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~ 155 (308)
T 1h6u_A 82 KNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQY 155 (308)
T ss_dssp TTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCE
T ss_pred ccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccE
Confidence 345788999999999885 33 68888899999999998884 443 88888888888888888844 33 788888888
Q ss_pred EeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCC
Q 007959 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (583)
|+|++|++++ ++. +..+++|+.|+|++|++++.++ ...+++|+.|++++|+...-
T Consensus 156 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 156 LSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp EECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBC
T ss_pred EEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcc
Confidence 8888888886 333 7888888888888888887655 66778888888888876543
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.57 E-value=1.9e-15 Score=162.44 Aligned_cols=127 Identities=22% Similarity=0.221 Sum_probs=115.3
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 68999999999999888889999999999999999999888999999999999999999999 67766 8999999999
Q ss_pred cCCcCCC-CCCccccccCCCCEEEeccCcCcccCCCCccccCC--CccccccCCC
Q 007959 152 SSNSLSD-YIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKF--SESSFFGNRG 203 (583)
Q Consensus 152 ~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l--~~l~l~~N~~ 203 (583)
++|+|++ .+|..|+++++|++|+|++|+|++ .....+++| +.|++++|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccc
Confidence 9999997 368899999999999999999987 344677888 9999999976
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.57 E-value=4.1e-15 Score=147.10 Aligned_cols=128 Identities=27% Similarity=0.344 Sum_probs=113.2
Q ss_pred CCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCce
Q 007959 69 DKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLN 148 (583)
Q Consensus 69 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 148 (583)
...++|+.|+|++|.+++ ++ .+..+++|++|+|++|+|++ ++ .+..+++|+.|+|++|+|++. ..+..+++|+.
T Consensus 87 ~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 160 (291)
T 1h6t_A 87 ANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 160 (291)
T ss_dssp TTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-CG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-Ch-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE
Confidence 456899999999999995 44 49999999999999999995 44 689999999999999999954 57999999999
Q ss_pred EeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCC
Q 007959 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (583)
|+|++|+|++..| +..+++|+.|+|++|+|+..+ .+..+++|+.|++++|+..+
T Consensus 161 L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 161 LSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEEC
T ss_pred EEccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccC
Confidence 9999999998544 999999999999999999864 47889999999999998654
No 356
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=3.3e-15 Score=158.80 Aligned_cols=128 Identities=20% Similarity=0.114 Sum_probs=100.9
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhh-ccCCCceEe
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELG-NLSNLLNLD 150 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ 150 (583)
++|+.|+|++|.|++..+. .+++|++|+|++|.|++..|..|.++++|+.|+|++|.|++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 3455555555555544333 357888899999999888788888899999999999999988888776 788999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|.|++. |. +..+++|+.|+|++|+|+++++.+..+++|+.|++++|+..
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 999999874 32 34588999999999999988888888889999999998744
No 357
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.7e-17 Score=154.59 Aligned_cols=132 Identities=27% Similarity=0.263 Sum_probs=104.5
Q ss_pred CcEEEEecCCCCCcccccc------cccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCC
Q 007959 72 KRVITLSLTNHKLSGPISA------DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSN 145 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 145 (583)
.+++.++++.+.+++..|. .|..+++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3555566666666666665 78888899999999998884 67 8888889999999999988 67877888888
Q ss_pred CceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCC--CCccccCCCccccccCCCCCCCc
Q 007959 146 LLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNRGLCGKQ 208 (583)
Q Consensus 146 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~~~c~~~ 208 (583)
|+.|+|++|+|++ +| .+..+++|+.|+|++|+|+..++ ....+++|+.|++++|++.|.+|
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 9999999999886 45 68888889999999998886544 44678888899998888765433
No 358
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.56 E-value=7.2e-15 Score=146.64 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=106.7
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.+++..+ +..+++|++|+|++|+|++ ++ .+..+++|++|+|++|+|++ ++. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 5789999999999995444 8999999999999999984 44 68899999999999999985 454 88999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|++++..+ +..+++|+.|+|++|++++.++ ...+++|+.|++++|+..
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccC
Confidence 99999987433 8899999999999999988766 778899999999999754
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.56 E-value=6.2e-15 Score=143.52 Aligned_cols=126 Identities=25% Similarity=0.273 Sum_probs=109.7
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|++++|+|+ .++ .+..+++|++|+|++|+|++. |. +.++++|++|+|++|+|++ +|.. .. ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 468999999999999 566 789999999999999999954 44 9999999999999999994 5543 33 9999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (583)
|++|+|++ ++ .+..+++|+.|+|++|+|++.+ ....+++|+.|++++|+...-
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcch
Confidence 99999997 43 6999999999999999999874 568899999999999986543
No 360
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.55 E-value=5.5e-15 Score=150.18 Aligned_cols=110 Identities=21% Similarity=0.158 Sum_probs=99.7
Q ss_pred ceEEccCC-ccCCCCCCCcCcccccceeeccc-ccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEec
Q 007959 99 KFLNLHSN-NFYGEIPSELGNCTELQGLSLQS-NYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVS 176 (583)
Q Consensus 99 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 176 (583)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|+++.|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 999 6888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred cCcCcccCCCCccccCCCccccccCCCCCCCccc
Q 007959 177 NNFLVGAIPSDGVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 177 ~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
+|+|+++++......+|+.|+|.+|++.|+|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~ 122 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCALR 122 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGH
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCccH
Confidence 9999999887644444999999999999999754
No 361
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.54 E-value=3.8e-15 Score=134.61 Aligned_cols=114 Identities=25% Similarity=0.208 Sum_probs=101.6
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccC-ChhhhccCCCceE
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSI-PSELGNLSNLLNL 149 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 149 (583)
.++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|++|+|++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 57899999999999965 78999999999999999999778888888999999999999999542 2789999999999
Q ss_pred eccCCcCCCCCC---ccccccCCCCEEEeccCcCcccCCC
Q 007959 150 DISSNSLSDYIP---PSLGKLQRLITFNVSNNFLVGAIPS 186 (583)
Q Consensus 150 ~l~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~~ 186 (583)
+|++|.+++..+ ..+..+++|++|++++|.+...+..
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 999999997544 4899999999999999999877654
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.54 E-value=1.6e-15 Score=168.65 Aligned_cols=132 Identities=28% Similarity=0.271 Sum_probs=116.0
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
...+|+.|+|++|.|+ .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|.+|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3578999999999999 78888889999999999999999 89999999999999999999999 889999999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCc-cc-cCCCccccccCCCCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDG-VL-TKFSESSFFGNRGLC 205 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~l-~~l~~l~l~~N~~~c 205 (583)
+|++|.|+ .+|..|..|++|+.|+|++|+|++.+|... .+ ..+..++|.+|....
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 99999998 588889999999999999999998877652 22 122346788887653
No 363
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=5.1e-15 Score=130.86 Aligned_cols=108 Identities=21% Similarity=0.186 Sum_probs=98.9
Q ss_pred CCCCCceEEccCCccC-CCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCE
Q 007959 94 KLDQLKFLNLHSNNFY-GEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLIT 172 (583)
Q Consensus 94 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 172 (583)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|+|++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 78999999999999999999999965 77999999999999999999878888889999999
Q ss_pred EEeccCcCcccC--CCCccccCCCccccccCCC
Q 007959 173 FNVSNNFLVGAI--PSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 173 L~l~~N~l~~~~--~~~~~l~~l~~l~l~~N~~ 203 (583)
|++++|++++.+ .....+++|+.|++++|+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 999999999864 5668899999999999974
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.53 E-value=1e-14 Score=148.14 Aligned_cols=128 Identities=21% Similarity=0.248 Sum_probs=71.4
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|++++|.+++..+ +..+++|++|+|++|++++ ++. +..+++|++|+|++|.+++ + ..+..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 3456666666666663332 5556666666666666653 222 5566666666666666653 2 2355566666666
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~ 206 (583)
+++|++++. ..+..+++|+.|+|++|++++..+.. ..+++|+.|++++|+...-
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 666666542 34555666666666666665554432 4555666666666654443
No 365
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=7.6e-15 Score=147.13 Aligned_cols=128 Identities=20% Similarity=0.114 Sum_probs=100.0
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhh-hccCCCceEe
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL-GNLSNLLNLD 150 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 150 (583)
++|+.|++++|++++..+. .+++|++|+|++|++++..|..|..+++|++|+|++|.|++..+..+ ..+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4555566666666644333 35778888999999887777788889999999999999987777766 4788999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
|++|+|++. +. ...+++|+.|+|++|+|+++++....+++|+.|++++|+..
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 999999864 32 33588999999999999988887788899999999998754
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.53 E-value=1.8e-14 Score=156.43 Aligned_cols=124 Identities=28% Similarity=0.361 Sum_probs=90.2
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|+|++..+ +..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++ ++ .+..+++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 4677888888888875444 777778888888888777 344 67777778888888777774 33 477777777777
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|+|++. ..+..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 777777763 567777777777777777777666 66677777777777754
No 367
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.52 E-value=4.8e-15 Score=159.14 Aligned_cols=134 Identities=25% Similarity=0.301 Sum_probs=100.3
Q ss_pred CCCCCCCCCCCC-----cccee-EeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccc
Q 007959 50 LNQWRPEDPDPC-----NWKGV-KCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQ 123 (583)
Q Consensus 50 ~~~w~~~~~~~c-----~w~gv-~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 123 (583)
+.+|.. +.++| .|.|+ .|. .++|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhc-cCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 455643 45677 69998 675 3578899999999985 66655 378888888888888 677 4567888
Q ss_pred eeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 124 GLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 124 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
+|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ .+++|+.|++++|+.
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCC
Confidence 88888888885 666 554 78888888888886 555 57788888888888877544 467777788877763
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.50 E-value=2.8e-14 Score=154.91 Aligned_cols=126 Identities=27% Similarity=0.361 Sum_probs=113.0
Q ss_pred CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceE
Q 007959 70 KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNL 149 (583)
Q Consensus 70 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 149 (583)
..++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ ++ .+..|++|+.|+|++|+|++. ..|..+++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 46799999999999995 44 79999999999999999995 44 699999999999999999954 679999999999
Q ss_pred eccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 150 DISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 150 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++..| +..+++|+.|+|++|+|+++ +.+..+++|+.|+|++|+..
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEE
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCc
Confidence 999999998655 99999999999999999986 56788999999999999864
No 369
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.48 E-value=3.8e-14 Score=144.12 Aligned_cols=143 Identities=16% Similarity=0.115 Sum_probs=112.3
Q ss_pred CccceeEeCC----------CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCC-CCcCcccccce-eecc
Q 007959 61 CNWKGVKCDK----------NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP-SELGNCTELQG-LSLQ 128 (583)
Q Consensus 61 c~w~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 128 (583)
|.|..|.|+. .+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 6788899953 2578999999999996555689999999999999999876665 46888988775 6677
Q ss_pred cccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEecc-CcCcccCCCC-ccc-cCCCccccccCCC
Q 007959 129 SNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSN-NFLVGAIPSD-GVL-TKFSESSFFGNRG 203 (583)
Q Consensus 129 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~l-~~l~~l~l~~N~~ 203 (583)
+|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++..+++.. ..+ ..++.|++++|..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 8999977788899999999999999999976666777777788888855 5677666543 333 3577788888864
No 370
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4.3e-16 Score=144.95 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=109.9
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 5789999999999996 67 8999999999999999999 788888889999999999999995 56 699999999999
Q ss_pred ccCCcCCCCCC-ccccccCCCCEEEeccCcCcccCCC-----------CccccCCCccccccCC
Q 007959 151 ISSNSLSDYIP-PSLGKLQRLITFNVSNNFLVGAIPS-----------DGVLTKFSESSFFGNR 202 (583)
Q Consensus 151 l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~-----------~~~l~~l~~l~l~~N~ 202 (583)
|++|+|++..+ ..+..+++|++|++++|++++.+|. +..+++|+.|+ +|+
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~ 183 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMP 183 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGG
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--Ccc
Confidence 99999996332 4789999999999999999888665 46788888775 555
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.48 E-value=5.8e-14 Score=148.61 Aligned_cols=126 Identities=29% Similarity=0.295 Sum_probs=83.1
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4567777777777775443 6677777777777777774333 6677777777777777774333 66677777777
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLC 205 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c 205 (583)
|++|++++..| +..+++|+.|++++|++++. +....+++|+.|++++|+...
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCB
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCc
Confidence 77777776443 56667777777777766655 344566666666666666543
No 372
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=3.9e-14 Score=128.97 Aligned_cols=111 Identities=17% Similarity=0.121 Sum_probs=96.1
Q ss_pred ccccCCCCCceEEccCCccCCCCCCCcCccc-ccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccC
Q 007959 90 ADLGKLDQLKFLNLHSNNFYGEIPSELGNCT-ELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQ 168 (583)
Q Consensus 90 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 168 (583)
..+.++++|++|+|++|+|+ .+|. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 34678899999999999999 5664 55555 999999999999964 5799999999999999999976556669999
Q ss_pred CCCEEEeccCcCcccCC--CCccccCCCccccccCCCC
Q 007959 169 RLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 169 ~L~~L~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~~~ 204 (583)
+|++|+|++|+|+..++ .+..+++|+.|++++|+..
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 99999999999987765 5688999999999999864
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.46 E-value=1.1e-14 Score=157.22 Aligned_cols=120 Identities=20% Similarity=0.202 Sum_probs=103.1
Q ss_pred EEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccC
Q 007959 74 VITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISS 153 (583)
Q Consensus 74 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 153 (583)
|..+.+++|.|+...+ ..|+.|+|++|+|+ .+|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++
T Consensus 425 L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 495 (567)
T 1dce_A 425 LRSKFLLENSVLKMEY------ADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASD 495 (567)
T ss_dssp HHHHHHHHHHHHHHHH------TTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred hhhhhhhcccccccCc------cCceEEEecCCCCC-CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCC
Confidence 3344455555553222 25999999999999 4786 999999999999999999 8999999999999999999
Q ss_pred CcCCCCCCccccccCCCCEEEeccCcCcccC--CCCccccCCCccccccCCCC
Q 007959 154 NSLSDYIPPSLGKLQRLITFNVSNNFLVGAI--PSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~--~~~~~l~~l~~l~l~~N~~~ 204 (583)
|+|++ +| .+..+++|+.|+|++|+|++.+ ..+..+++|+.|+|++|+..
T Consensus 496 N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 496 NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 99997 67 8999999999999999999994 55689999999999999854
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.44 E-value=2e-13 Score=144.39 Aligned_cols=127 Identities=30% Similarity=0.393 Sum_probs=106.4
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|++++ + +.+..+++|++|+|++|++++..| +..+++|+.|+|++|.+++..+ +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 5689999999999985 3 368889999999999999986554 8889999999999999995444 88899999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGLCG 206 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~c~ 206 (583)
|++|++++..+ +..+++|+.|+|++|++++.++ ...+++|+.|++++|+...-
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc
Confidence 99999987443 7889999999999999988776 67889999999999976543
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.43 E-value=1.4e-13 Score=147.82 Aligned_cols=101 Identities=24% Similarity=0.320 Sum_probs=64.3
Q ss_pred CCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCce
Q 007959 69 DKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLN 148 (583)
Q Consensus 69 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 148 (583)
...++|+.|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.
T Consensus 97 ~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~ 164 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEV 164 (571)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCE
T ss_pred cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCE
Confidence 335678888888888885 565 554 77777777777774 554 46667777777777763 454 4566666
Q ss_pred EeccCCcCCCCCCccccccCCCCEEEeccCcCcccCC
Q 007959 149 LDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIP 185 (583)
Q Consensus 149 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 185 (583)
|+|++|+|++ +|. |. ++|+.|+|++|+|+.++.
T Consensus 165 L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 165 LSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA 197 (571)
T ss_dssp EECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC
T ss_pred EECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh
Confidence 6666666665 444 43 566666666666654443
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.43 E-value=2.4e-13 Score=137.95 Aligned_cols=124 Identities=25% Similarity=0.350 Sum_probs=84.3
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|++++|.+++. +. +..+++|++|++++|.+++..+ +..+++|++|+|++|++++ ++. +..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLE 249 (347)
T ss_dssp CTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEE
Confidence 45677777777777743 32 6677777777777777774333 6677777777777777773 333 67777777777
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
+++|.+++. ..+..+++|+.|++++|++++. +....+++|+.|++++|+.
T Consensus 250 l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 250 IGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred CCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcC
Confidence 777777752 4567777777777777777765 3456677777777777764
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.43 E-value=3.4e-13 Score=142.00 Aligned_cols=120 Identities=23% Similarity=0.253 Sum_probs=83.0
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|++|+|++|.+++. | .+..+++|++|+|++|+|++ +| ++.+++|++|+|++|+|++ +| +.++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEE
Confidence 35677777777777743 4 57777777777777777774 33 6777777777777777774 33 67777777777
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
|++|++++ +| +..+++|++|++++|+++++ ....+++|+.|++++|+.
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~ 160 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKK 160 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCc
Confidence 77777776 33 67777777777777777764 245666777777777643
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=9.3e-14 Score=150.98 Aligned_cols=134 Identities=24% Similarity=0.289 Sum_probs=74.8
Q ss_pred CCCCCCCCCCCCccceeEeC-------CCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCccccc
Q 007959 50 LNQWRPEDPDPCNWKGVKCD-------KNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTEL 122 (583)
Q Consensus 50 ~~~w~~~~~~~c~w~gv~c~-------~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 122 (583)
.+.|. .+.++|.|+|..|. ...+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|
T Consensus 12 w~~W~-~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWR-RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHH-HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHH-hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 34564 24567777553221 1234667777777777 5565554 56777777777766 4554 45666
Q ss_pred ceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCC
Q 007959 123 QGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 123 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~ 202 (583)
++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++++.. +++|+.|++++|+
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCCc
Confidence 66777777666 4444 45666666666666664 333 344555555555555543332 2444455555443
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.39 E-value=2.8e-14 Score=147.17 Aligned_cols=133 Identities=19% Similarity=0.206 Sum_probs=78.9
Q ss_pred CcEEEEecCCCCCc-cccc---ccccCCCCCceEEccCCccC--C---CCCCCcCcccccceeeccccccc----ccCCh
Q 007959 72 KRVITLSLTNHKLS-GPIS---ADLGKLDQLKFLNLHSNNFY--G---EIPSELGNCTELQGLSLQSNYLS----GSIPS 138 (583)
Q Consensus 72 ~~l~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~ 138 (583)
++|++|+|++|+|+ +.++ ..+..+++|++|+|++|+|+ | ..|..+..+++|+.|+|++|.|+ ..+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45666666666665 3333 34555666666666666665 2 33445666666666666666664 45666
Q ss_pred hhhccCCCceEeccCCcCCCC----CCcccc--ccCCCCEEEeccCcCcc-----cCCCC-ccccCCCccccccCCCC
Q 007959 139 ELGNLSNLLNLDISSNSLSDY----IPPSLG--KLQRLITFNVSNNFLVG-----AIPSD-GVLTKFSESSFFGNRGL 204 (583)
Q Consensus 139 ~~~~l~~L~~L~l~~N~l~~~----~~~~~~--~l~~L~~L~l~~N~l~~-----~~~~~-~~l~~l~~l~l~~N~~~ 204 (583)
.+..+++|+.|+|++|+|++. ++..+. .+++|+.|+|++|.|+. ++... ..+++|+.|++++|+..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 666666666677766666643 344442 26666777777776665 33333 34566666676666543
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.38 E-value=1.3e-12 Score=137.60 Aligned_cols=130 Identities=16% Similarity=0.186 Sum_probs=88.9
Q ss_pred CccceeEeCCCCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhh
Q 007959 61 CNWKGVKCDKNKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSEL 140 (583)
Q Consensus 61 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 140 (583)
|...++.....++|++|+|++|++++ +| ++.+++|++|+|++|+|++ ++ +.++++|++|++++|+..+.+ .+
T Consensus 95 N~l~~~~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~ 166 (457)
T 3bz5_A 95 NKLTNLDVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DV 166 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CC
T ss_pred CCCceeecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--cc
Confidence 33445445556789999999999986 44 8888999999999999885 33 667777777777777544444 36
Q ss_pred hccCCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 141 GNLSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
..+++|+.|++++|+|++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|+.
T Consensus 167 ~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 167 TPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp TTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCC
T ss_pred ccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcc
Confidence 666777777777777765 33 56666666666666666654 245566666666666653
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.38 E-value=4.2e-14 Score=142.85 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=81.0
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCC-CCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGE-IPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.+++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4566666666666654443 44566777777777766644 555666667777777777766666666666667777777
Q ss_pred ccCC-cCCCC-CCccccccCCCCEEEeccC-cCccc--CCCCcccc-CCCccccccCC
Q 007959 151 ISSN-SLSDY-IPPSLGKLQRLITFNVSNN-FLVGA--IPSDGVLT-KFSESSFFGNR 202 (583)
Q Consensus 151 l~~N-~l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~--~~~~~~l~-~l~~l~l~~N~ 202 (583)
|++| .+++. ++..+..+++|++|+|++| .+++. +.....++ +|+.|++++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 7766 45532 4455666666777777766 66542 22235566 66666666663
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.36 E-value=2.2e-14 Score=144.97 Aligned_cols=133 Identities=17% Similarity=0.156 Sum_probs=103.6
Q ss_pred CCcEEEEecCCCCCccc-ccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccc-ccccc-CChhhhccCCCc
Q 007959 71 NKRVITLSLTNHKLSGP-ISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSN-YLSGS-IPSELGNLSNLL 147 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~ 147 (583)
.++|++|+|++|.+++. ++..+..+++|++|+|++|++++..|..+..+++|++|+|++| .+++. ++..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 46888899998888855 7778888888999999988888777878888888888888888 67753 667788888888
Q ss_pred eEeccCC-cCCCC-CCccccccC-CCCEEEeccCc--Cc--ccCCCCccccCCCccccccCCC
Q 007959 148 NLDISSN-SLSDY-IPPSLGKLQ-RLITFNVSNNF--LV--GAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 148 ~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N~--l~--~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
+|+|++| .+++. ++..+..++ +|+.|+|++|. ++ +.+.....+++|+.|++++|..
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 8888888 88753 466677888 88888888884 43 2222336678888888888874
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.35 E-value=2.1e-12 Score=140.38 Aligned_cols=56 Identities=27% Similarity=0.215 Sum_probs=26.6
Q ss_pred CCCceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 144 SNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 144 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+.+++.+..+++|+.|++++|++
T Consensus 241 ~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 241 SELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 344444444444442 332 33445555555555554433344555555555555554
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.34 E-value=9.3e-14 Score=141.92 Aligned_cols=132 Identities=20% Similarity=0.192 Sum_probs=90.0
Q ss_pred CcEEEEecCCCCCccccc----ccccCCC-CCceEEccCCccCCCCCCCcCcc-----cccceeecccccccccCChhhh
Q 007959 72 KRVITLSLTNHKLSGPIS----ADLGKLD-QLKFLNLHSNNFYGEIPSELGNC-----TELQGLSLQSNYLSGSIPSELG 141 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~ 141 (583)
++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457888888888875555 5677777 78888888888876666666665 7788888888888766665444
Q ss_pred cc-----CCCceEeccCCcCCCCCCccccc-----cCCCCEEEeccCcCcccCCC-----Ccccc-CCCccccccCCC
Q 007959 142 NL-----SNLLNLDISSNSLSDYIPPSLGK-----LQRLITFNVSNNFLVGAIPS-----DGVLT-KFSESSFFGNRG 203 (583)
Q Consensus 142 ~l-----~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~~~-----~~~l~-~l~~l~l~~N~~ 203 (583)
.. ++|+.|+|++|+|++..+..+.. .++|++|+|++|+|+..... +..++ +|+.|++++|+.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 33 77888888888887655544433 25788888888887743221 12233 777888877764
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.34 E-value=3e-12 Score=134.59 Aligned_cols=117 Identities=22% Similarity=0.251 Sum_probs=64.6
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .|.++++|++|++++|++++ +|..+ ++|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 445555555555552 2211 1466666666666663 55 46666666666666666663 44432 35666666
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~ 203 (583)
++|++++ +| .+.++++|+.|++++|++++++.. .++|+.|++++|..
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~n~l 227 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNIL 227 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC---cCcccEEECcCCcC
Confidence 6666665 44 456666666666666666553322 23555555555543
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.32 E-value=8.7e-14 Score=143.49 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=62.8
Q ss_pred CcEEEEecCCCCCcc----cccccccCCCCCceEEccCCccCCCCCCC----cCcc---------cccceeeccccccc-
Q 007959 72 KRVITLSLTNHKLSG----PISADLGKLDQLKFLNLHSNNFYGEIPSE----LGNC---------TELQGLSLQSNYLS- 133 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l---------~~L~~L~L~~N~l~- 133 (583)
++|++|+|++|.+++ .+|..+..+++|++|+|++|.|+...+.. +..+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 455555555555554 24445555555555555555554222222 2222 55555555555554
Q ss_pred ccCC---hhhhccCCCceEeccCCcCCC-----CCCccccccCCCCEEEeccCcCc----c-cCCCCccccCCCcccccc
Q 007959 134 GSIP---SELGNLSNLLNLDISSNSLSD-----YIPPSLGKLQRLITFNVSNNFLV----G-AIPSDGVLTKFSESSFFG 200 (583)
Q Consensus 134 ~~~p---~~~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l~~L~~L~l~~N~l~----~-~~~~~~~l~~l~~l~l~~ 200 (583)
+.+| ..+..+++|+.|+|++|+|+. ..|..+..+++|+.|+|++|.|+ . ++..+..+++|+.|+|++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 2233 234455555555555555541 12234455555555555555553 1 222234455555555555
Q ss_pred CC
Q 007959 201 NR 202 (583)
Q Consensus 201 N~ 202 (583)
|+
T Consensus 254 n~ 255 (386)
T 2ca6_A 254 CL 255 (386)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.31 E-value=5.2e-12 Score=122.76 Aligned_cols=148 Identities=19% Similarity=0.126 Sum_probs=115.1
Q ss_pred HHHHHhcCCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeeeCCCceE
Q 007959 301 DIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKL 379 (583)
Q Consensus 301 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 379 (583)
.+...+..|+....++.|+.+.||++... +..+++|............+.+|+++++.+. +..+.++++++.+.+..+
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34456677887888899999999998754 6889999886532222346889999999884 677888999988888899
Q ss_pred EEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 007959 380 LIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC----------------------------------- 424 (583)
Q Consensus 380 lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 424 (583)
+||||++|.+|.+.+. +......++.+++++++.||+..
T Consensus 87 lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999999987642 11223478899999999999710
Q ss_pred ---------------------CCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 425 ---------------------SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 425 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
...++|+|+++.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799998765
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.30 E-value=3.3e-12 Score=129.74 Aligned_cols=124 Identities=15% Similarity=0.065 Sum_probs=104.2
Q ss_pred EEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCC-hhhhccCCCce-EeccC
Q 007959 76 TLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIP-SELGNLSNLLN-LDISS 153 (583)
Q Consensus 76 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~l~~ 153 (583)
+++.++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 5789999999 778766 4689999999999995555679999999999999999976666 46899999875 67788
Q ss_pred CcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCC
Q 007959 154 NSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (583)
Q Consensus 154 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (583)
|+|+.+.|..|..+++|++|++++|+|+..++.. ....++..+++.+|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 9999888899999999999999999999887654 455667777777654
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.29 E-value=5.7e-13 Score=136.07 Aligned_cols=129 Identities=22% Similarity=0.205 Sum_probs=109.7
Q ss_pred EEecCCCCCcccccccccCCCCCceEEccCCccCCCCC----CCcCccc-ccceeecccccccccCChhhhcc-----CC
Q 007959 76 TLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIP----SELGNCT-ELQGLSLQSNYLSGSIPSELGNL-----SN 145 (583)
Q Consensus 76 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 145 (583)
.++|+.|++++.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999996666 6788888 99999999999998888888876 99
Q ss_pred CceEeccCCcCCCCCCcccccc-----CCCCEEEeccCcCcccCCCC-----cc-ccCCCccccccCCCC
Q 007959 146 LLNLDISSNSLSDYIPPSLGKL-----QRLITFNVSNNFLVGAIPSD-----GV-LTKFSESSFFGNRGL 204 (583)
Q Consensus 146 L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~-----~~-l~~l~~l~l~~N~~~ 204 (583)
|++|+|++|+|++..+..+... ++|+.|+|++|+|+...+.. .. .++|+.|++++|...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 9999999999998777655554 89999999999998776532 12 359999999999754
No 390
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.28 E-value=9.2e-12 Score=130.89 Aligned_cols=119 Identities=24% Similarity=0.204 Sum_probs=99.3
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEe
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLD 150 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 150 (583)
.++|+.|+|++|.+++ +|.. +++|++|+|++|+++ .+|.. .++|++|+|++|++++ +| .|.++++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 4689999999999996 6653 478999999999998 44432 2689999999999995 77 599999999999
Q ss_pred ccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccCCCC
Q 007959 151 ISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGNRGL 204 (583)
Q Consensus 151 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N~~~ 204 (583)
+++|++++ +|..+ ++|++|++++|++++. |.+..+++|+.|++++|...
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N~l~ 208 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLK 208 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCS
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCcC-ccccCCCCCCEEECCCCcCC
Confidence 99999997 66543 5899999999999985 46788999999999999754
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.18 E-value=5.9e-13 Score=140.54 Aligned_cols=133 Identities=20% Similarity=0.086 Sum_probs=80.7
Q ss_pred CCcEEEEecCCCCCcccc-----cccccCCCCCceEEccCCccCCC----CCCCcCcccccceeecccccccccCChhhh
Q 007959 71 NKRVITLSLTNHKLSGPI-----SADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLSGSIPSELG 141 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 141 (583)
.++|+.|+|++|.++... +..+..+++|++|+|++|+|+.. ++..+.++++|++|+|++|.|++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 356777777777776432 22333567777777777777743 455566677777777777777654444443
Q ss_pred cc-----CCCceEeccCCcCCCC----CCccccccCCCCEEEeccCcCcccCCC-Cc-----cccCCCccccccCCC
Q 007959 142 NL-----SNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIPS-DG-----VLTKFSESSFFGNRG 203 (583)
Q Consensus 142 ~l-----~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~-----~l~~l~~l~l~~N~~ 203 (583)
.. ++|+.|+|++|.+++. ++..+..+++|+.|+|++|+++...+. +. ..++|+.|++++|+.
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 32 5677777777776643 344555666777777777766544221 11 144666677766653
No 392
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=7.4e-11 Score=114.23 Aligned_cols=136 Identities=15% Similarity=0.062 Sum_probs=99.8
Q ss_pred CCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCc--eeeeeeeeeCCCceEEEEEcC
Q 007959 308 TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 308 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~ 385 (583)
.+....+.+.|..+.||++...+|..+++|..... ....+..|+++++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34333333456679999998877888999987643 2245788999999886544 455888888777889999999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC----------------------------------------- 424 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 424 (583)
+|.++. ... .+ ...++.++++.+..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888531
Q ss_pred --------------CCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 425 --------------SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 425 --------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999875
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.10 E-value=3.9e-12 Score=134.25 Aligned_cols=130 Identities=22% Similarity=0.192 Sum_probs=74.8
Q ss_pred cEEEEecCCCCCcc----cccccccCCCCCceEEccCCccCCCCCCCc-----Ccccccceeeccccccccc----CChh
Q 007959 73 RVITLSLTNHKLSG----PISADLGKLDQLKFLNLHSNNFYGEIPSEL-----GNCTELQGLSLQSNYLSGS----IPSE 139 (583)
Q Consensus 73 ~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p~~ 139 (583)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 56667777776662 446666666677777777766653322222 2244566667766666643 2444
Q ss_pred hhccCCCceEeccCCcCCCCCCccccc-----cCCCCEEEeccCcCccc-----CCCCccccCCCccccccCC
Q 007959 140 LGNLSNLLNLDISSNSLSDYIPPSLGK-----LQRLITFNVSNNFLVGA-----IPSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 140 ~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~-----~~~~~~l~~l~~l~l~~N~ 202 (583)
+..+++|++|+|++|.+++..+..+.. +++|+.|+|++|.++.. +..+..+++|+.|++++|+
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 238 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCc
Confidence 555666777777776665433333322 44666777777666642 2222455666667766664
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.06 E-value=6.3e-12 Score=128.30 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=98.8
Q ss_pred CcEEEEecCCCCCccccccc-ccCCCCCceEEccCCccCCCCCCCc-----Ccccccceeecccccccc----cCChhhh
Q 007959 72 KRVITLSLTNHKLSGPISAD-LGKLDQLKFLNLHSNNFYGEIPSEL-----GNCTELQGLSLQSNYLSG----SIPSELG 141 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 141 (583)
.+|+.|+|++|.|+...... ...+++|++|+|++|+|+......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 68999999999997443333 3356789999999999974433333 346789999999999974 2455567
Q ss_pred ccCCCceEeccCCcCCCC----CCccccccCCCCEEEeccCcCcccCC-----CCccccCCCccccccCCC
Q 007959 142 NLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIP-----SDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 142 ~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~-----~~~~l~~l~~l~l~~N~~ 203 (583)
.+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+.... .+...++|+.|+|++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 889999999999998752 24566778899999999999975322 123458899999999974
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.02 E-value=7.5e-10 Score=112.68 Aligned_cols=142 Identities=17% Similarity=0.249 Sum_probs=107.1
Q ss_pred ccceeeecCceEEEEEEEcCCcEEEEEeec--ccch-hhHHHHHHHHHHHHhCC--CCceeeeeeeeeCC---CceEEEE
Q 007959 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRID--KLNE-GFDRFFERELEILGSIK--HRYLVNLRGYCNSP---TSKLLIY 382 (583)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 382 (583)
..+.++.|.++.||++...+ ..+++|+.. .... .....+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999987764 678888775 3221 22456888999999987 45678888888766 4578999
Q ss_pred EcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 007959 383 DFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC-------------------------------------- 424 (583)
Q Consensus 383 e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 424 (583)
||++|..+.+.. ...++...+..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998885522 234778888999999999999999720
Q ss_pred -----------------CCCeeecCCCCCCeEecCCCc--EEEeecCcccc
Q 007959 425 -----------------SPRIIHRDIKSSNILLDGNLE--ARVSDFGLAKL 456 (583)
Q Consensus 425 -----------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgl~~~ 456 (583)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997653 68999998874
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.00 E-value=4.4e-10 Score=111.57 Aligned_cols=186 Identities=20% Similarity=0.207 Sum_probs=123.0
Q ss_pred cceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCc--eeeeeeeeeCCC---ceEEEEEcC
Q 007959 312 DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRY--LVNLRGYCNSPT---SKLLIYDFL 385 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 385 (583)
.+.++.|....||++. ..+++|..... .....+.+|+++++.+. +.. +.+++....... ..++||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4679999999999863 46888875432 33567889999998873 332 334444433332 347899999
Q ss_pred CCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 007959 386 PGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD------------------------------------------ 423 (583)
Q Consensus 386 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 423 (583)
+|.++.+... ..++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988876432 3477788888999999999999851
Q ss_pred -------------CCCCeeecCCCCCCeEecC--CCcEEEeecCcccccCcCCceeeee-------------eccccccc
Q 007959 424 -------------CSPRIIHRDIKSSNILLDG--NLEARVSDFGLAKLLEDEESHITTI-------------VAGTFGYL 475 (583)
Q Consensus 424 -------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~~~~~~~-------------~~gt~~y~ 475 (583)
..+.++|+|+++.||++++ +..+.|+||+.+........-.... .....+..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0135899999999999997 4568899999887543211000000 00000111
Q ss_pred c-ccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 007959 476 A-PEYMQSGRATEKTDVYSFGVLVLEVLSGKRPT 508 (583)
Q Consensus 476 a-PE~~~~~~~~~~~Dv~s~G~il~elltg~~p~ 508 (583)
. |+.... .....+.|++|.++|.+.+|..++
T Consensus 256 ~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 222111 122368999999999999998775
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=2.9e-11 Score=116.27 Aligned_cols=64 Identities=30% Similarity=0.356 Sum_probs=32.3
Q ss_pred cccccceeecccccccc--cCChhhhccCCCceEeccCCcCCCCCCccccccC--CCCEEEeccCcCccc
Q 007959 118 NCTELQGLSLQSNYLSG--SIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQ--RLITFNVSNNFLVGA 183 (583)
Q Consensus 118 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~ 183 (583)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccc
Confidence 34555555555555554 2334445555555555555555542 2233333 555555555555543
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=6.7e-10 Score=111.57 Aligned_cols=129 Identities=14% Similarity=0.149 Sum_probs=85.4
Q ss_pred CCcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCc--------------------------------
Q 007959 71 NKRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGN-------------------------------- 118 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-------------------------------- 118 (583)
..+|+.|+|.+ +++.+.+.+|.++++|+.|+|++|.++...+..|.+
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 36889999999 888666778999999999999999875333333333
Q ss_pred ----------------------------------------------ccccceeecccccccccCChhhhccCCCceEecc
Q 007959 119 ----------------------------------------------CTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (583)
Q Consensus 119 ----------------------------------------------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 152 (583)
+++|+.|+|++|+++.+.+..|.++++|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 4566666666666664444556666666666666
Q ss_pred CCcCCCCCCccccccCCCC-EEEeccCcCcccCCCC-ccccCCCccccccCC
Q 007959 153 SNSLSDYIPPSLGKLQRLI-TFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (583)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (583)
+| ++.+.+..|.++++|+ .|++.+ .++.+.+.. ..+++|+.+++.+|.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCc
Confidence 66 5555556666666666 666666 555554433 566666666665554
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=1.7e-09 Score=108.59 Aligned_cols=102 Identities=13% Similarity=-0.012 Sum_probs=90.7
Q ss_pred CCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCc-eEeccCCcCCCCCCccccccCCCCEE
Q 007959 95 LDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLL-NLDISSNSLSDYIPPSLGKLQRLITF 173 (583)
Q Consensus 95 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L 173 (583)
+++|+.|+|++|+++...+..|.++++|+.|+|++| ++.+-+.+|.++++|+ .|+|.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678999999999999666678999999999999998 8867778899999999 999999 7887778999999999999
Q ss_pred EeccCcCcccCCCC-ccccCCCcccc
Q 007959 174 NVSNNFLVGAIPSD-GVLTKFSESSF 198 (583)
Q Consensus 174 ~l~~N~l~~~~~~~-~~l~~l~~l~l 198 (583)
++++|+++.+.+.. ..+++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999988755 77888888764
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.93 E-value=2.3e-11 Score=124.18 Aligned_cols=132 Identities=16% Similarity=0.094 Sum_probs=100.4
Q ss_pred CcEEEEecCCCCCcccccccccCC-----CCCceEEccCCccCCCCCCC-cCcccccceeecccccccccCChhhh----
Q 007959 72 KRVITLSLTNHKLSGPISADLGKL-----DQLKFLNLHSNNFYGEIPSE-LGNCTELQGLSLQSNYLSGSIPSELG---- 141 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~---- 141 (583)
++|+.|+|++|.|+......+... ++|++|+|++|.|+...... ...+++|+.|+|++|.|+......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 579999999999985544444333 79999999999997433323 34578999999999999855545442
Q ss_pred -ccCCCceEeccCCcCCCC----CCccccccCCCCEEEeccCcCcccC-----CCCccccCCCccccccCCC
Q 007959 142 -NLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAI-----PSDGVLTKFSESSFFGNRG 203 (583)
Q Consensus 142 -~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-----~~~~~l~~l~~l~l~~N~~ 203 (583)
..++|+.|+|++|.|++. ++..+..+++|++|+|++|.|+... ..+...++|+.|+|++|..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i 223 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGA 223 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCC
Confidence 468899999999999752 3445577899999999999997532 2234567899999999863
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.8e-09 Score=103.74 Aligned_cols=80 Identities=26% Similarity=0.397 Sum_probs=66.0
Q ss_pred cCCCCCceEEccCCccCC--CCCCCcCcccccceeecccccccccCChhhhccC--CCceEeccCCcCCCCCCc------
Q 007959 93 GKLDQLKFLNLHSNNFYG--EIPSELGNCTELQGLSLQSNYLSGSIPSELGNLS--NLLNLDISSNSLSDYIPP------ 162 (583)
Q Consensus 93 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~------ 162 (583)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 4456778999999999999999965 3355555 999999999999976663
Q ss_pred -cccccCCCCEEE
Q 007959 163 -SLGKLQRLITFN 174 (583)
Q Consensus 163 -~~~~l~~L~~L~ 174 (583)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 467888998875
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.72 E-value=2.8e-09 Score=116.01 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=64.9
Q ss_pred cEEEEecCCCC-Cc-ccccccccCCCCCceEEccCCccCCC----CCCCcCcccccceeeccccccc----ccCChhhhc
Q 007959 73 RVITLSLTNHK-LS-GPISADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLS----GSIPSELGN 142 (583)
Q Consensus 73 ~l~~L~L~~n~-l~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~ 142 (583)
+|++|+|++|. ++ ..++....++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 47777777765 22 11222334667777777777776644 3333456677777777777776 234444566
Q ss_pred cCCCceEeccCCcCCCCCCccccccCCCCEEEecc
Q 007959 143 LSNLLNLDISSNSLSDYIPPSLGKLQRLITFNVSN 177 (583)
Q Consensus 143 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 177 (583)
+++|+.|+|++|.+.+ +|..+..+++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777765 556666666666666654
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.72 E-value=4.2e-10 Score=122.56 Aligned_cols=131 Identities=15% Similarity=0.092 Sum_probs=80.8
Q ss_pred CcEEEEecCCCCCcccccccccC-CCCCceEEcc----CCccCCC-----CCCCcCcccccceeecccc--cccccCChh
Q 007959 72 KRVITLSLTNHKLSGPISADLGK-LDQLKFLNLH----SNNFYGE-----IPSELGNCTELQGLSLQSN--YLSGSIPSE 139 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p~~ 139 (583)
++|+.|+|+.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 45666666666666555444444 6667777774 5566632 2223555677777777643 355444444
Q ss_pred hh-ccCCCceEeccCCcCCC-CCCccccccCCCCEEEeccCcCccc-CCCC-ccccCCCccccccCC
Q 007959 140 LG-NLSNLLNLDISSNSLSD-YIPPSLGKLQRLITFNVSNNFLVGA-IPSD-GVLTKFSESSFFGNR 202 (583)
Q Consensus 140 ~~-~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~-~~l~~l~~l~l~~N~ 202 (583)
+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.++.. ++.. ..+++|+.|++++|+
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 43 36778888888887764 2344456677888888888877543 2222 457778888888876
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69 E-value=1.5e-07 Score=93.85 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=105.4
Q ss_pred HHHHHhc---CCCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCC----Cceeeeeeeee
Q 007959 301 DIIKKLE---TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKH----RYLVNLRGYCN 373 (583)
Q Consensus 301 ~~~~~~~---~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~ 373 (583)
.+...+. .+...+.++.|....||++ |..+++|..... .....+.+|.+++..+.+ ..+.+++++
T Consensus 28 ~i~~~~g~~~~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-- 99 (320)
T 3r70_A 28 EIYEHLNKQIKINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ-- 99 (320)
T ss_dssp HHHHHHHHHSCCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--
T ss_pred HHHHHcCCCcceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--
Confidence 3444444 5667788999999999987 667888866432 223558899999888865 223344444
Q ss_pred CCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------
Q 007959 374 SPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC----------------------------- 424 (583)
Q Consensus 374 ~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------- 424 (583)
+..++||||++|.++.+... ..++..++..++.++++.++.||...
T Consensus 100 --~~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 100 --SDRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp --CSSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 56789999999998874431 23677777888888888888888531
Q ss_pred -------------------------------CCCeeecCCCCCCeEecCCCcEEEeecCccccc
Q 007959 425 -------------------------------SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL 457 (583)
Q Consensus 425 -------------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 457 (583)
.+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999988654
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.69 E-value=1.8e-09 Score=98.59 Aligned_cols=111 Identities=22% Similarity=0.284 Sum_probs=72.2
Q ss_pred CCcEEEEecCCC-CCccc----ccccccCCCCCceEEccCCccCCC----CCCCcCcccccceeeccccccccc----CC
Q 007959 71 NKRVITLSLTNH-KLSGP----ISADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLSGS----IP 137 (583)
Q Consensus 71 ~~~l~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 137 (583)
.++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457778888887 77632 344556667788888888877632 233444556778888888877743 34
Q ss_pred hhhhccCCCceEec--cCCcCCCC----CCccccccCCCCEEEeccCcCc
Q 007959 138 SELGNLSNLLNLDI--SSNSLSDY----IPPSLGKLQRLITFNVSNNFLV 181 (583)
Q Consensus 138 ~~~~~l~~L~~L~l--~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 181 (583)
..+...++|++|+| ++|.|.+. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 55666677888888 67777642 2234445577777777777764
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.61 E-value=4.3e-07 Score=88.90 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=93.4
Q ss_pred ccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC---ceeeeeeeeeCCCceEEEEEcCCC
Q 007959 311 DDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR---YLVNLRGYCNSPTSKLLIYDFLPG 387 (583)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 387 (583)
..+.|+.|.++.||++...+|..+++|+...........|..|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45789999999999999999999999986543333346789999999999875 567777663 36899999999
Q ss_pred Cchhh-----------HhhhcCC--------------------CCCHHHHHH--------------------HHHHHHHH
Q 007959 388 GSLDE-----------ALHERSE--------------------QLDWDARLN--------------------IIMGAAKG 416 (583)
Q Consensus 388 gsL~~-----------~l~~~~~--------------------~l~~~~~~~--------------------i~~~ia~~ 416 (583)
+++.. .||.... .-+|..... ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87532 2232110 013432210 01111222
Q ss_pred HHHHh----hcCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 417 LAYLH----HDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 417 l~~LH----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+..+. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 22232 122567999999999999987 46889999 554
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.60 E-value=2.7e-09 Score=97.49 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=90.1
Q ss_pred cccccccCCCCCceEEccCC-ccCCC----CCCCcCcccccceeeccccccccc----CChhhhccCCCceEeccCCcCC
Q 007959 87 PISADLGKLDQLKFLNLHSN-NFYGE----IPSELGNCTELQGLSLQSNYLSGS----IPSELGNLSNLLNLDISSNSLS 157 (583)
Q Consensus 87 ~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 157 (583)
.+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44556778899999999999 88632 344567778999999999999843 3455667789999999999998
Q ss_pred CC----CCccccccCCCCEEEe--ccCcCcccC-----CCCccccCCCccccccCC
Q 007959 158 DY----IPPSLGKLQRLITFNV--SNNFLVGAI-----PSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 158 ~~----~~~~~~~l~~L~~L~l--~~N~l~~~~-----~~~~~l~~l~~l~l~~N~ 202 (583)
+. +...+...++|++|+| ++|.|...- ..+...++|+.|+|++|.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 53 3456777889999999 889997532 122445789999998885
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.55 E-value=2.1e-09 Score=116.97 Aligned_cols=130 Identities=11% Similarity=0.118 Sum_probs=69.8
Q ss_pred CcEEEEecCCCCCccccccccc-CCCCCceEEcc--C----CccCCC-----CCCCcCcccccceeecccccccccCChh
Q 007959 72 KRVITLSLTNHKLSGPISADLG-KLDQLKFLNLH--S----NNFYGE-----IPSELGNCTELQGLSLQSNYLSGSIPSE 139 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 139 (583)
++|+.|+++.|++++.....+. .+++|+.|+|+ + |.++.. ++..+.++++|+.|+|++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3455555555555543333333 35666666666 3 444411 111144556666666655 455444444
Q ss_pred hhc-cCCCceEeccCCcCCCCCCccc-cccCCCCEEEeccCcCcccCC--CCccccCCCccccccCC
Q 007959 140 LGN-LSNLLNLDISSNSLSDYIPPSL-GKLQRLITFNVSNNFLVGAIP--SDGVLTKFSESSFFGNR 202 (583)
Q Consensus 140 ~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~--~~~~l~~l~~l~l~~N~ 202 (583)
+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++.... ....+++|+.|++++|+
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 444 6667777777776654333333 456677777777777643222 12446677777776665
No 409
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.51 E-value=1.4e-06 Score=86.29 Aligned_cols=136 Identities=18% Similarity=0.170 Sum_probs=95.1
Q ss_pred cceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC---ceeeeeeeee-CCCceEEEEEcCCC
Q 007959 312 DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR---YLVNLRGYCN-SPTSKLLIYDFLPG 387 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 387 (583)
.+.++.|....||+. |..+++|.-.. ......+.+|.+++..+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467889999999987 56788887432 23456789999999999653 3556666663 45567899999999
Q ss_pred CchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 007959 388 GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHD-------------------------------------------- 423 (583)
Q Consensus 388 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------------- 423 (583)
.++.+..- ..++......++.++++.|+.||..
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88876321 1234455555555555555555532
Q ss_pred -------------CCCCeeecCCCCCCeEecC---CCc-EEEeecCcccc
Q 007959 424 -------------CSPRIIHRDIKSSNILLDG---NLE-ARVSDFGLAKL 456 (583)
Q Consensus 424 -------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgl~~~ 456 (583)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335799999999999987 455 58999997764
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.46 E-value=1e-08 Score=111.66 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=80.7
Q ss_pred CCcEEEEecCCCCCccccccccc-CCCCCceEEccCC-ccCCC-CCCCcCcccccceeecccccccccCChhhh----cc
Q 007959 71 NKRVITLSLTNHKLSGPISADLG-KLDQLKFLNLHSN-NFYGE-IPSELGNCTELQGLSLQSNYLSGSIPSELG----NL 143 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l 143 (583)
.++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35777888888877766555554 5778888888877 44422 343445677888888888877755544443 55
Q ss_pred CCCceEeccCCcCCCCCCcc----ccccCCCCEEEeccC-cCcccCCCCccccCCCccccccC
Q 007959 144 SNLLNLDISSNSLSDYIPPS----LGKLQRLITFNVSNN-FLVGAIPSDGVLTKFSESSFFGN 201 (583)
Q Consensus 144 ~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~L~l~~N-~l~~~~~~~~~l~~l~~l~l~~N 201 (583)
++|+.|+|++|. ....... +..+++|+.|+|++| .+++.+.....+++|+.|++.++
T Consensus 184 ~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 184 TSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBC
T ss_pred CcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccc
Confidence 678888888776 2111122 234577888888777 44442223355667777765544
No 411
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.38 E-value=1.6e-06 Score=87.83 Aligned_cols=144 Identities=13% Similarity=0.169 Sum_probs=91.1
Q ss_pred CCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCc--eeeeeeeeeCC-CceEEEEEcC
Q 007959 309 LDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNLRGYCNSP-TSKLLIYDFL 385 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 385 (583)
....+.++.|....+|+... ++..+++|..... ..+..|+.++..+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 33457789999999999875 5788899876532 25888999998886533 45666666554 5689999999
Q ss_pred CCCchhhH------------------hhhcC--C--C------------CCHHHHH---------------------HHH
Q 007959 386 PGGSLDEA------------------LHERS--E--Q------------LDWDARL---------------------NII 410 (583)
Q Consensus 386 ~~gsL~~~------------------l~~~~--~--~------------l~~~~~~---------------------~i~ 410 (583)
+|.++.+. ||... . . -+|...+ ...
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98666421 11110 0 0 0111110 111
Q ss_pred HHHHHHHHHHhhc-CCCCeeecCCCCCCeEecCCCcEEEeecCcccccC
Q 007959 411 MGAAKGLAYLHHD-CSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE 458 (583)
Q Consensus 411 ~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 458 (583)
..+...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+....
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 1122222333211 02568999999999999877778899999887543
No 412
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.38 E-value=2.3e-06 Score=82.86 Aligned_cols=135 Identities=21% Similarity=0.213 Sum_probs=97.0
Q ss_pred ceeeecCce-EEEEEEEc-CCcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeeeCCCceEEEEEcCCCCc
Q 007959 313 HIIGSGGFG-TVYKLAMD-DGNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (583)
Q Consensus 313 ~~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 389 (583)
+.+..|..| .||+.... ++..+++|+-... ....+.+|...++.+. +-.+.++++++.+.+..++|||++++.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556555 68987665 4567888865432 3456888999998874 3346678888888889999999999988
Q ss_pred hhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------------
Q 007959 390 LDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDC--------------------------------------------- 424 (583)
Q Consensus 390 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------------- 424 (583)
+.+..... ......+..+++..|+.||...
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 87765321 1223456667777777777420
Q ss_pred ----------CCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 425 ----------SPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 425 ----------~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
...++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237899999999999987777899999775
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.37 E-value=5.7e-07 Score=92.46 Aligned_cols=126 Identities=14% Similarity=0.150 Sum_probs=99.7
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccccccc-----ccCChhhhccCCC
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLS-----GSIPSELGNLSNL 146 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L 146 (583)
.+|+.|+|.+| ++.+-..+|.+ .+|+.++| .|.++..-+..|.++++|+.++|.+|.+. ...+..|.++++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 57888888875 66566667877 88999999 45677566778999999999999988775 4566779999999
Q ss_pred ceEeccCCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCC
Q 007959 147 LNLDISSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRG 203 (583)
Q Consensus 147 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~ 203 (583)
+.++|. |.++.+....|.++++|+.|+|.+| ++.+.... ..+ +|+.+.+.+|..
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 999998 4587767788999999999999655 76665544 666 899999998853
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.37 E-value=5.5e-08 Score=98.32 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=62.1
Q ss_pred CCcEEEEecCCCC-CcccccccccCCCCCceEEccCCccCCCCCCCcC--cccccceeeccc--cccccc-----CChhh
Q 007959 71 NKRVITLSLTNHK-LSGPISADLGKLDQLKFLNLHSNNFYGEIPSELG--NCTELQGLSLQS--NYLSGS-----IPSEL 140 (583)
Q Consensus 71 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~ 140 (583)
.++|+.|+|++|. ++ ++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3566666666552 22 222 2 256666666666655432222222 456666666642 211111 11112
Q ss_pred --hccCCCceEeccCCcCCCCCCcccc---ccCCCCEEEeccCcCccc-----CCCCccccCCCccccccCC
Q 007959 141 --GNLSNLLNLDISSNSLSDYIPPSLG---KLQRLITFNVSNNFLVGA-----IPSDGVLTKFSESSFFGNR 202 (583)
Q Consensus 141 --~~l~~L~~L~l~~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~~-----~~~~~~l~~l~~l~l~~N~ 202 (583)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|+.. ...+..+++|+.|++++|.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 2356666666666666532222222 356666666666666542 1122445666666666553
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.35 E-value=6.3e-07 Score=92.11 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=103.9
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+|+.+.|.++ ++.+-..+|.++++|+.|+|.+| ++..-...|.+ .+|+.+.| .|.++..-+.+|.++++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 57888999854 87677779999999999999986 66466667888 89999999 56677566788999999999999
Q ss_pred cCCcCC-----CCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccC
Q 007959 152 SSNSLS-----DYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (583)
Q Consensus 152 ~~N~l~-----~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (583)
.+|.+. .+.+..|.++++|+.++|. |.++.+.... ..+.+|+.+.|..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 999876 4567889999999999999 4587776654 77899999999766
No 416
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.34 E-value=8.9e-07 Score=89.69 Aligned_cols=81 Identities=7% Similarity=0.059 Sum_probs=55.8
Q ss_pred ccee-eecCceEEEEEEEc-------CCcEEEEEeecccc---hhhHHHHHHHHHHHHhCCC---CceeeeeeeeeCC--
Q 007959 312 DHII-GSGGFGTVYKLAMD-------DGNVFALKRIDKLN---EGFDRFFERELEILGSIKH---RYLVNLRGYCNSP-- 375 (583)
Q Consensus 312 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~-- 375 (583)
.+.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+.. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999998765 26678888665322 1012457788888888742 3566777777655
Q ss_pred -CceEEEEEcCCCCchhh
Q 007959 376 -TSKLLIYDFLPGGSLDE 392 (583)
Q Consensus 376 -~~~~lv~e~~~~gsL~~ 392 (583)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877654
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.27 E-value=1.4e-07 Score=95.36 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=90.7
Q ss_pred CCcEEEEecCCCCCccccccccc--CCCCCceEEccC--CccCCC-----CCCCc--CcccccceeecccccccccCChh
Q 007959 71 NKRVITLSLTNHKLSGPISADLG--KLDQLKFLNLHS--NNFYGE-----IPSEL--GNCTELQGLSLQSNYLSGSIPSE 139 (583)
Q Consensus 71 ~~~l~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~l~~~~p~~ 139 (583)
..+|+.|+|..+.++......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 46899999999998754434443 789999999863 222111 11122 35799999999999998655555
Q ss_pred hh---ccCCCceEeccCCcCCCC----CCccccccCCCCEEEeccCcCcccCCCCccccC-C-CccccccCC
Q 007959 140 LG---NLSNLLNLDISSNSLSDY----IPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTK-F-SESSFFGNR 202 (583)
Q Consensus 140 ~~---~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~-l-~~l~l~~N~ 202 (583)
+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+... ...+.. + ..+++++|+
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~--~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM--KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH--HHHHHHHCCSEEECCSBC
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH--HHHHHHHcCCEEEecCCc
Confidence 44 578999999999999863 3445567899999999999886431 122222 2 456676665
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.09 E-value=3.1e-05 Score=77.62 Aligned_cols=138 Identities=21% Similarity=0.325 Sum_probs=79.9
Q ss_pred ceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCC-----CCceeeee-e--eeeCCCceEEEEEc
Q 007959 313 HIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK-----HRYLVNLR-G--YCNSPTSKLLIYDF 384 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~ 384 (583)
+.|+.|..+.||++...+| .+++|+..... ..+..|+.++..+. .|.++... | +....+..+++++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566678899999887655 48899887521 23344555555542 23333311 1 11235667899999
Q ss_pred CCCCchh--------------hHhhhcCC-------------CCCHHHHH------------------------------
Q 007959 385 LPGGSLD--------------EALHERSE-------------QLDWDARL------------------------------ 407 (583)
Q Consensus 385 ~~~gsL~--------------~~l~~~~~-------------~l~~~~~~------------------------------ 407 (583)
++|..+. ..+|.... .-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 12222111 01232210
Q ss_pred -HHHHHHHHHHHHHhh----------cCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 408 -NIIMGAAKGLAYLHH----------DCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 408 -~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
.+...+..++.+|++ .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 125689999999999999878899999999765
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.05 E-value=4.8e-06 Score=70.70 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=41.4
Q ss_pred eEeccCCcCC-CCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCCCCCCCccc
Q 007959 148 NLDISSNSLS-DYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNRGLCGKQIN 210 (583)
Q Consensus 148 ~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~~~c~~~~~ 210 (583)
.++-+++.++ ..+|..+. ++|+.|+|++|+|+.+++.. ..+++|+.|+|.+|||.|+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 5666666665 12443321 35777777777777766654 66777888888999999988763
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.02 E-value=1.4e-06 Score=77.57 Aligned_cols=82 Identities=12% Similarity=0.132 Sum_probs=34.8
Q ss_pred CCceEEccCCccCCCCCCCcCcccccceeeccccc-ccccCChhhhcc----CCCceEeccCCc-CCCCCCccccccCCC
Q 007959 97 QLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNY-LSGSIPSELGNL----SNLLNLDISSNS-LSDYIPPSLGKLQRL 170 (583)
Q Consensus 97 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~L 170 (583)
+|+.|||+++.|+..--..+.++++|+.|+|++|. |+..--..+..+ ++|++|+|+++. |++.--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444433222233444445555555442 433222223332 245555555542 443222234445555
Q ss_pred CEEEeccC
Q 007959 171 ITFNVSNN 178 (583)
Q Consensus 171 ~~L~l~~N 178 (583)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 421
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=3.4e-05 Score=79.14 Aligned_cols=75 Identities=13% Similarity=0.017 Sum_probs=48.2
Q ss_pred cceeeecCceEEEEEEEc-CCcEEEEEeecccch-------hhHHHHHHHHHHHHhCCC--Ccee-eeeeeeeCCCceEE
Q 007959 312 DHIIGSGGFGTVYKLAMD-DGNVFALKRIDKLNE-------GFDRFFERELEILGSIKH--RYLV-NLRGYCNSPTSKLL 380 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l 380 (583)
.+.||.|.++.||++... ++..+++|....... .....+..|.+++..+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 467899997643211 122346778888887732 3333 44443 3445689
Q ss_pred EEEcCCCC
Q 007959 381 IYDFLPGG 388 (583)
Q Consensus 381 v~e~~~~g 388 (583)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.92 E-value=4.5e-05 Score=74.48 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=56.6
Q ss_pred CCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC---ceeeeeeeeeCCCceEEEEEcC
Q 007959 309 LDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR---YLVNLRGYCNSPTSKLLIYDFL 385 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 385 (583)
....+.+|.|..+.||+..+.||+.|++|+-..........|..|++.|+.+.-. .+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 3345778999999999999999999999976544444445688999999888421 234444432 347899999
Q ss_pred CCCch
Q 007959 386 PGGSL 390 (583)
Q Consensus 386 ~~gsL 390 (583)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.91 E-value=8.6e-05 Score=73.15 Aligned_cols=138 Identities=15% Similarity=0.186 Sum_probs=92.7
Q ss_pred CccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCC---CCceeeeeeeeeCCCceEEEEEcCC
Q 007959 310 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIK---HRYLVNLRGYCNSPTSKLLIYDFLP 386 (583)
Q Consensus 310 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 386 (583)
...+.|+.|....+|+... ++..+++|..... ....+..|.+.|+.+. ...+.++++++...+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3456799999999999876 4678888876532 2566889999888873 3567888888887788999999999
Q ss_pred CCchhh-----------HhhhcCC--C-------------------CCHHHHH---HHHH----------------HHH-
Q 007959 387 GGSLDE-----------ALHERSE--Q-------------------LDWDARL---NIIM----------------GAA- 414 (583)
Q Consensus 387 ~gsL~~-----------~l~~~~~--~-------------------l~~~~~~---~i~~----------------~ia- 414 (583)
+..+.. .||.... . -+|.... ++.. .+.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 876521 2332211 0 2454332 1111 111
Q ss_pred HHHHHHhh-cCCCCeeecCCCCCCeEecCCCcEEEeecC
Q 007959 415 KGLAYLHH-DCSPRIIHRDIKSSNILLDGNLEARVSDFG 452 (583)
Q Consensus 415 ~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 452 (583)
.....|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11223421 2256799999999999999887 8899974
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.88 E-value=3.8e-06 Score=74.77 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=68.6
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCc-cCCCCCCCcCcc----cccceeeccccc-ccccCChhhhccCC
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNN-FYGEIPSELGNC----TELQGLSLQSNY-LSGSIPSELGNLSN 145 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 145 (583)
-+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|++|. ||..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999985555667899999999999985 664333345543 479999999985 88655566889999
Q ss_pred CceEeccCCc-CCC
Q 007959 146 LLNLDISSNS-LSD 158 (583)
Q Consensus 146 L~~L~l~~N~-l~~ 158 (583)
|+.|+|++.. +++
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 9999999985 553
No 425
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.65 E-value=7.3e-05 Score=76.59 Aligned_cols=116 Identities=12% Similarity=0.178 Sum_probs=78.9
Q ss_pred CCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCc
Q 007959 83 KLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPP 162 (583)
Q Consensus 83 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 162 (583)
.++.+-..+|.++.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++.+-..
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 344344557777888888888766554 555677788888888885 4455455566788888888888754 5555566
Q ss_pred cccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccCC
Q 007959 163 SLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGNR 202 (583)
Q Consensus 163 ~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N~ 202 (583)
+|.++.+|+.+.|..+ ++.+.... ..+.+|+.+.+.+|.
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 7888888888888644 55444433 667778888887765
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.58 E-value=1.2e-05 Score=73.03 Aligned_cols=62 Identities=13% Similarity=0.253 Sum_probs=29.0
Q ss_pred CcEEEEecCCC-CCcc----cccccccCCCCCceEEccCCccCCC----CCCCcCcccccceeeccccccc
Q 007959 72 KRVITLSLTNH-KLSG----PISADLGKLDQLKFLNLHSNNFYGE----IPSELGNCTELQGLSLQSNYLS 133 (583)
Q Consensus 72 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 133 (583)
+.|+.|+|++| +|.. .+.+.+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 45555566553 4441 1223344445555555555555421 1122223345555555555555
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00038 Score=71.87 Aligned_cols=79 Identities=10% Similarity=0.057 Sum_probs=48.2
Q ss_pred CCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccC---CCCcccchhhHHHHHHHH
Q 007959 425 SPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSG---RATEKTDVYSFGVLVLEV 501 (583)
Q Consensus 425 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~il~el 501 (583)
...++|+|+++.|||++.++ ++++||+.+......-.-......-...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 56899999999999998776 99999998875432110000000011345666654311 112345566777778877
Q ss_pred HhC
Q 007959 502 LSG 504 (583)
Q Consensus 502 ltg 504 (583)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.50 E-value=0.00048 Score=68.19 Aligned_cols=157 Identities=18% Similarity=0.166 Sum_probs=89.4
Q ss_pred CCCHHHHHHHhcCCCc-----cceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCc--eeee
Q 007959 296 PYSSKDIIKKLETLDD-----DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRY--LVNL 368 (583)
Q Consensus 296 ~~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 368 (583)
.++.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|+.++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3556677766666654 24466788899999887766 57888776521 1234566777777664222 2233
Q ss_pred eee------eeCCCceEEEEEcCCCCchhh--------------HhhhcCCC--------C---CHHHHHH---------
Q 007959 369 RGY------CNSPTSKLLIYDFLPGGSLDE--------------ALHERSEQ--------L---DWDARLN--------- 408 (583)
Q Consensus 369 ~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~--------l---~~~~~~~--------- 408 (583)
+.. ....+..+++++|++|..+.. .+|..... . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112345689999998865421 12221100 1 1322111
Q ss_pred ---HHHHHHHHHHHHhhc----CCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 409 ---IIMGAAKGLAYLHHD----CSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 409 ---i~~~ia~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+...+.+.++++++. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 13579999999999999977656899999775
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.48 E-value=0.0002 Score=73.24 Aligned_cols=124 Identities=8% Similarity=0.095 Sum_probs=86.2
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
..|+.+.+.++..+ +-...|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++.+-..+|.++++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 45667777665444 556688889999999996 4566455667999999999999865 66455677999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCCCccccCCCccccccC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSDGVLTKFSESSFFGN 201 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~N 201 (583)
..+ ++.+-..+|.++++|+.+++.+|.... .......+|+.+.+..|
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC--------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCC
Confidence 755 665667789999999999998886542 22344556666665544
No 430
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.46 E-value=0.00031 Score=71.43 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=83.5
Q ss_pred cEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEecc
Q 007959 73 RVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDIS 152 (583)
Q Consensus 73 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 152 (583)
+++.+.+..+ ++.+....|.+..+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3444554433 34344556777777888877765 55355566777888888888654 553555667888888888888
Q ss_pred CCcCCCCCCccccccCCCCEEEeccCcCcccCCCC-ccccCCCccccccC
Q 007959 153 SNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (583)
Q Consensus 153 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (583)
+|.++.+-...|.++.+|+.+.|..+ ++.+.... ..+.+|+.+.+..|
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 88887666677888888888888654 55554433 56677777777544
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.41 E-value=0.00022 Score=60.36 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=23.1
Q ss_pred EEecCCCCCc-ccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeeccccc
Q 007959 76 TLSLTNHKLS-GPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNY 131 (583)
Q Consensus 76 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 131 (583)
.++.++++|+ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4455555554 22332221 234455555555543333334444444444444443
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.39 E-value=0.00062 Score=66.74 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=75.1
Q ss_pred CCccceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCce-eeeeeeeeCCCceEEEEEcC-C
Q 007959 309 LDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIYDFL-P 386 (583)
Q Consensus 309 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 386 (583)
+...+.|+.|....+|+. ..+++|........ ......|+.+++.+....+ .+++++ +.+.-++++||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 334688999999999998 45788866543211 1123457777776643223 344444 333457899999 6
Q ss_pred CCchhhH------------------hhhcCCCC----C-HHHHHHHHHH--------------HHHHHH----HHhh-cC
Q 007959 387 GGSLDEA------------------LHERSEQL----D-WDARLNIIMG--------------AAKGLA----YLHH-DC 424 (583)
Q Consensus 387 ~gsL~~~------------------l~~~~~~l----~-~~~~~~i~~~--------------ia~~l~----~LH~-~~ 424 (583)
+.++... +|.....+ + +.....+... +.+.+. .+.. ..
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 5544321 11111111 1 1111111100 111111 1111 11
Q ss_pred CCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 425 SPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 425 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
...++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5567889999998764
No 433
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.35 E-value=0.00033 Score=71.65 Aligned_cols=105 Identities=11% Similarity=0.033 Sum_probs=64.5
Q ss_pred cccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCCcCCCCCCccccccCCC
Q 007959 91 DLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSNSLSDYIPPSLGKLQRL 170 (583)
Q Consensus 91 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 170 (583)
.|.....|+.+.+..+.+ ....|..+.+|+.+.+.++ ++..-..+|.++++|+.++|.++ ++.+-..+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 344444444444433322 1234666777777777654 55344566777788888887644 665556677778888
Q ss_pred CEEEeccCcCcccCCCC-ccccCCCccccccC
Q 007959 171 ITFNVSNNFLVGAIPSD-GVLTKFSESSFFGN 201 (583)
Q Consensus 171 ~~L~l~~N~l~~~~~~~-~~l~~l~~l~l~~N 201 (583)
+.+++..| ++.+.... ..+.+|+.+.+..|
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 88887766 65554433 66777777777554
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.27 E-value=0.00066 Score=69.39 Aligned_cols=124 Identities=8% Similarity=-0.004 Sum_probs=69.7
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
.+|+.+.|.+ +++.+-..+|.++++|+.++|.+| ++..-...|.++++|+.+.+..+ ++..-...|.++..+.....
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 5678888764 466455567888888888888655 55344556777777777777654 22233344444433322222
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCcccCCC-CccccCCCccccccC
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGAIPS-DGVLTKFSESSFFGN 201 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~N 201 (583)
... ..+....|.++++|+.+.+.++. ..+... ...+.+|+.+.+..|
T Consensus 148 ~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 148 EGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT
T ss_pred ccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC
Confidence 222 11233456666677777765543 223322 245566666666555
No 435
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.26 E-value=0.0005 Score=69.81 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=88.0
Q ss_pred CcEEEEecCCCCCcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEec
Q 007959 72 KRVITLSLTNHKLSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDI 151 (583)
Q Consensus 72 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 151 (583)
..|+.+.+..+ ++.+-...|.+..+|+.+.+..+ ++..-...|.++++|+.+.+.+|.++..-...|.++++|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 56788888765 66566678999999999999765 65455668999999999999999999666778999999999999
Q ss_pred cCCcCCCCCCccccccCCCCEEEeccCcCccc
Q 007959 152 SSNSLSDYIPPSLGKLQRLITFNVSNNFLVGA 183 (583)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 183 (583)
..+ ++.+-..+|.++++|+.+.+..| ++.+
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 865 77666788999999999988654 5433
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.20 E-value=0.0027 Score=62.91 Aligned_cols=157 Identities=12% Similarity=0.114 Sum_probs=90.0
Q ss_pred CCCHHHHHHHhcCCCc-----cceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCC--ceeee
Q 007959 296 PYSSKDIIKKLETLDD-----DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHR--YLVNL 368 (583)
Q Consensus 296 ~~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l 368 (583)
..+.+.+....+.|.. ...++ |....||++...+|..+++|...... .....+..|..++..+... .+.++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 3455666655555432 24566 88899999887778789999876321 1234567788887777422 23444
Q ss_pred eee-----eeCCCceEEEEEcCCCCchhh--------------Hhhhc--------CCCCCHHHH----HHH--------
Q 007959 369 RGY-----CNSPTSKLLIYDFLPGGSLDE--------------ALHER--------SEQLDWDAR----LNI-------- 409 (583)
Q Consensus 369 ~~~-----~~~~~~~~lv~e~~~~gsL~~--------------~l~~~--------~~~l~~~~~----~~i-------- 409 (583)
+.. ....+..+++++|++|..+.. .+|.. ....++... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 433 112345578999998754321 12211 011222211 001
Q ss_pred -------HHHHHHHHHHHhhc----CCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 410 -------IMGAAKGLAYLHHD----CSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 410 -------~~~ia~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
...+...++.+.+. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 245688999999999999 5 899999987753
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.18 E-value=0.0029 Score=62.90 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=72.4
Q ss_pred ceeeecCceE-EEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCC--CceeeeeeeeeCCCceEEEEEcCCCCc
Q 007959 313 HIIGSGGFGT-VYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKH--RYLVNLRGYCNSPTSKLLIYDFLPGGS 389 (583)
Q Consensus 313 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs 389 (583)
+.|+.|.... +|+....+|..+++|...... ...+..|+.++..+.. -.+.+++.+..+.+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 667665446777777544321 0234456777666632 23445665543333 78999997766
Q ss_pred hhhHhhhc---------------------C----CCCCHHHHH-------H-H------------HHHHHHHHHHHhh--
Q 007959 390 LDEALHER---------------------S----EQLDWDARL-------N-I------------IMGAAKGLAYLHH-- 422 (583)
Q Consensus 390 L~~~l~~~---------------------~----~~l~~~~~~-------~-i------------~~~ia~~l~~LH~-- 422 (583)
+.+.+... . ..++..... . + ...+...+..+.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65443210 0 012211110 0 0 0011122222211
Q ss_pred -cCCCCeeecCCCCCCeEecCC----CcEEEeecCccccc
Q 007959 423 -DCSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKLL 457 (583)
Q Consensus 423 -~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~~~ 457 (583)
.....++|||+.+.|||++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 114579999999999999874 68999999988753
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=5.9e-05 Score=68.37 Aligned_cols=91 Identities=19% Similarity=0.164 Sum_probs=66.5
Q ss_pred cccccCCCCCceEEccCC-ccCC----CCCCCcCcccccceeeccccccccc----CChhhhccCCCceEeccCCcCCCC
Q 007959 89 SADLGKLDQLKFLNLHSN-NFYG----EIPSELGNCTELQGLSLQSNYLSGS----IPSELGNLSNLLNLDISSNSLSDY 159 (583)
Q Consensus 89 ~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 159 (583)
...+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|.+.
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 344556688999999986 7752 2334566678999999999999843 344455668999999999999842
Q ss_pred ----CCccccccCCCCEEEeccCc
Q 007959 160 ----IPPSLGKLQRLITFNVSNNF 179 (583)
Q Consensus 160 ----~~~~~~~l~~L~~L~l~~N~ 179 (583)
+-+.+..-+.|+.|+|++|.
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHhhCCceeEEECCCCc
Confidence 22345556789999998763
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.10 E-value=0.0033 Score=57.27 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=69.6
Q ss_pred CchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCcccccCcCCceeeee
Q 007959 388 GSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTI 467 (583)
Q Consensus 388 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 467 (583)
-||.+.|+..+..+++++++.++.|.+.+|.-+-.. ..-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 389999999999999999999999999998776211 0111333457899999999998774 1110
Q ss_pred eccccccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 007959 468 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRP 507 (583)
Q Consensus 468 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p 507 (583)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888753 3557888999999999998864433
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.08 E-value=0.0012 Score=68.28 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=48.7
Q ss_pred cceeeecCceEEEEEEEcC--------CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCce-eeeeeeeeCCCceEEEE
Q 007959 312 DHIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 382 (583)
.+.|+.|....+|++...+ +..+++|+.... .....+.+|..++..+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568889999999998763 478888877432 111345578888888743333 456665542 3899
Q ss_pred EcCCCCch
Q 007959 383 DFLPGGSL 390 (583)
Q Consensus 383 e~~~~gsL 390 (583)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.88 E-value=0.0036 Score=63.23 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=81.4
Q ss_pred ceeeecCceEEEEEEEcC--------CcEEEEEeecccchhhHHHHHHHHHHHHhCC-CCceeeeeeeeeCCCceEEEEE
Q 007959 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIK-HRYLVNLRGYCNSPTSKLLIYD 383 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 383 (583)
+.+..|....+|+....+ +..+++|+..... .......+|.++++.+. +.-..++++++.+ .+|+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 567778888999987753 4688888753321 22445668999988774 2223556666543 29999
Q ss_pred cCCCCchhhH-----------------hhhc----CCCCC--HHHHHHHHHHHHH-------------------HHHHHh
Q 007959 384 FLPGGSLDEA-----------------LHER----SEQLD--WDARLNIIMGAAK-------------------GLAYLH 421 (583)
Q Consensus 384 ~~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia~-------------------~l~~LH 421 (583)
|++|.+|..- +|.- ..... |.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9987655321 1111 11122 4455555544322 233332
Q ss_pred h----c-CCCCeeecCCCCCCeEecCC----CcEEEeecCcccc
Q 007959 422 H----D-CSPRIIHRDIKSSNILLDGN----LEARVSDFGLAKL 456 (583)
Q Consensus 422 ~----~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~~ 456 (583)
+ . ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1 13468899999999999876 7899999987753
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.77 E-value=0.0034 Score=63.41 Aligned_cols=73 Identities=15% Similarity=0.133 Sum_probs=42.7
Q ss_pred ceeeecCceEEEEEEEcC---------CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCc-eeeeeeeeeCCCceEEEE
Q 007959 313 HIIGSGGFGTVYKLAMDD---------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRY-LVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 382 (583)
+.++.|....+|+....+ +..+++|......... .....|.+++..+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 567888889999988764 2678888665432211 12356788877774333 33555443 1 36899
Q ss_pred EcCCCCch
Q 007959 383 DFLPGGSL 390 (583)
Q Consensus 383 e~~~~gsL 390 (583)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.70 E-value=0.0055 Score=61.04 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=27.8
Q ss_pred CCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 425 SPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 425 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987754
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.60 E-value=0.0095 Score=61.79 Aligned_cols=74 Identities=16% Similarity=0.148 Sum_probs=47.0
Q ss_pred cceeeecCceEEEEEEEcC-CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCce-eeeeeeeeCCCceEEEEEcCCCCc
Q 007959 312 DHIIGSGGFGTVYKLAMDD-GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYL-VNLRGYCNSPTSKLLIYDFLPGGS 389 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 389 (583)
.+.|+.|....+|++...+ +..+++|+........ -...+|..++..+...++ .++++.+. + .+|+||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3678889999999998875 4778888664322111 112578888888865444 45666653 2 35999998755
Q ss_pred h
Q 007959 390 L 390 (583)
Q Consensus 390 L 390 (583)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.12 E-value=0.018 Score=58.39 Aligned_cols=139 Identities=16% Similarity=0.189 Sum_probs=79.2
Q ss_pred ceeeecCceEEEEEEEcC--------CcEEEEEeecccchh----------h--------HHHHHHHHHHHHhCC-CCce
Q 007959 313 HIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEG----------F--------DRFFERELEILGSIK-HRYL 365 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~--------~~~~~~E~~~l~~l~-h~ni 365 (583)
+.|..|-...+|+...++ +..|.++..-...+. . ......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 556678888899887764 356777765332211 0 112234888877774 3334
Q ss_pred eeeeeeeeCCCceEEEEEcCCCCchhhH-----------------hhhc----CCCCC--HHHHHHHHHHHH--------
Q 007959 366 VNLRGYCNSPTSKLLIYDFLPGGSLDEA-----------------LHER----SEQLD--WDARLNIIMGAA-------- 414 (583)
Q Consensus 366 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia-------- 414 (583)
.++++++.. .+|+||+++-+|..- +|.. ..... |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666543 289999986544211 1111 11122 233433433321
Q ss_pred --------------HHHH----HHhhc-CCCCeeecCCCCCCeEecCC------CcEEEeecCccc
Q 007959 415 --------------KGLA----YLHHD-CSPRIIHRDIKSSNILLDGN------LEARVSDFGLAK 455 (583)
Q Consensus 415 --------------~~l~----~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgl~~ 455 (583)
.-+. +|... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 13468899999999999876 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.46 E-value=0.096 Score=53.54 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=81.7
Q ss_pred cceeeecCceEEEEEEEcC--------CcEEEEEeecccchhhHHHHHHHHHHHHhCCCCc-eeeeeeeeeCCCceEEEE
Q 007959 312 DHIIGSGGFGTVYKLAMDD--------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRY-LVNLRGYCNSPTSKLLIY 382 (583)
Q Consensus 312 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 382 (583)
.+.+..|....+|+....+ +..+++++....... .-...+|.++++.+...+ ..++++.+. -++|+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788889999988763 577888875432211 112356888877774222 344554332 27899
Q ss_pred EcCCCCchhh-------H----------hhhc---C-------C-C-CCHHHHHHHHHHH-------------------H
Q 007959 383 DFLPGGSLDE-------A----------LHER---S-------E-Q-LDWDARLNIIMGA-------------------A 414 (583)
Q Consensus 383 e~~~~gsL~~-------~----------l~~~---~-------~-~-l~~~~~~~i~~~i-------------------a 414 (583)
||++|.+|.. . +|.. . . . .-|.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865421 0 1110 0 1 1 1244443333222 2
Q ss_pred HHHHHHhhc---------------------CCCCeeecCCCCCCeEecCCCcEEEeecCcccc
Q 007959 415 KGLAYLHHD---------------------CSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL 456 (583)
Q Consensus 415 ~~l~~LH~~---------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 456 (583)
..+.+|.+. ....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223333211 1346889999999999 7788999999998763
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.03 E-value=0.28 Score=49.76 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=25.0
Q ss_pred CeeecCCCCCCeEe------cCCCcEEEeecCcccc
Q 007959 427 RIIHRDIKSSNILL------DGNLEARVSDFGLAKL 456 (583)
Q Consensus 427 ~ivH~dlk~~Nill------~~~~~~kl~Dfgl~~~ 456 (583)
.++|+|+.+.||++ +++..+.++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999988763
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.09 E-value=0.22 Score=32.38 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=11.5
Q ss_pred eeehhhhhHHHHHHHHHhhhhheecc
Q 007959 244 ISASATVGALLLVALMCFWGCFLYKK 269 (583)
Q Consensus 244 i~~~~~~~~~l~~~~~~~~~~~~~~~ 269 (583)
|.+++++|++++++++..++++.+++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 34444454555444444433333333
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.48 E-value=1.3 Score=40.20 Aligned_cols=117 Identities=11% Similarity=0.135 Sum_probs=79.9
Q ss_pred CCCceeeeeeeeeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeEe
Q 007959 361 KHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILL 440 (583)
Q Consensus 361 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 440 (583)
.||+.++. .+-.+.+...+.|+.-+.+.=...+ ..++...+++++.+|+....+++ .-+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i----k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI----KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG----GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH----HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEE
Confidence 68888866 4556666666666654422222223 33788999999999999887777 34788999999999
Q ss_pred cCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 007959 441 DGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDA 510 (583)
Q Consensus 441 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~il~elltg~~p~~~ 510 (583)
+.++.+++.-.|+...+.+ . ..+...=.-.+=+++..+++++..|+.
T Consensus 113 ~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred cCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999987775433221 1 011111123467889999999998865
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=86.37 E-value=0.41 Score=31.01 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=11.2
Q ss_pred eeehhhhhHHHHHHHHHhhhhheecc
Q 007959 244 ISASATVGALLLVALMCFWGCFLYKK 269 (583)
Q Consensus 244 i~~~~~~~~~l~~~~~~~~~~~~~~~ 269 (583)
|.+++++|++++++++..++++.+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 34444444554444444333333333
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.96 E-value=2.5 Score=38.47 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=79.3
Q ss_pred CCCceeeeeeeeeCCCceEEEEEcCCCCchhhHhhhcCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCeeecCCCCCCeE
Q 007959 361 KHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLA-YLHHDCSPRIIHRDIKSSNIL 439 (583)
Q Consensus 361 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~Nil 439 (583)
.||++ -..+-.+++...+.|+.-+++.=...++ .++...+++++.+|+.... +++ .-+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 67877 3444467777777777654443333443 3788999999999988877 666 4578889999999
Q ss_pred ecCCCcEEEeecCcccccCcCCceeeeeeccccccccccccccCCCCcccc-hhhHHHHHHHHHhCCCCCCc
Q 007959 440 LDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTD-VYSFGVLVLEVLSGKRPTDA 510 (583)
Q Consensus 440 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D-v~s~G~il~elltg~~p~~~ 510 (583)
++.++.+++.-.|+-..+ +|.-+ + ..| .-.+=+++..++.++..|+.
T Consensus 117 f~~~~~p~i~hRGi~~~l------------------pP~e~-----~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL------------------PPDEW-----D-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTTB------------------SSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcccC------------------CCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999987754432 22211 1 112 22466788888888887754
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.82 E-value=0.37 Score=31.16 Aligned_cols=26 Identities=35% Similarity=0.523 Sum_probs=11.6
Q ss_pred eehhhhhHHHHHHHHHhhhhheeccc
Q 007959 245 SASATVGALLLVALMCFWGCFLYKKL 270 (583)
Q Consensus 245 ~~~~~~~~~l~~~~~~~~~~~~~~~~ 270 (583)
+++.++|+++++++...++++.+|++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 34444454444444444444444443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.60 E-value=0.3 Score=50.55 Aligned_cols=59 Identities=7% Similarity=-0.053 Sum_probs=17.0
Q ss_pred ccceeeecCceEEEEEEEcC-CcEEEE------Eeecccc--hhhHHHHHHHHHHHHhCCCCceeeeeeee
Q 007959 311 DDHIIGSGGFGTVYKLAMDD-GNVFAL------KRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYC 372 (583)
Q Consensus 311 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 372 (583)
..+.|| ||.||+|.+.. ..+||| |...... ......|.+|..++..++|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 346676 99999998865 367888 6655322 22234678899999999999999988775
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=62.12 E-value=19 Score=27.96 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=19.5
Q ss_pred CcccccccccCCCCCceEEccCCccCCCCCCCcCcccccceeecc
Q 007959 84 LSGPISADLGKLDQLKFLNLHSNNFYGEIPSELGNCTELQGLSLQ 128 (583)
Q Consensus 84 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 128 (583)
++.+-...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33333344555555555555443 222333345555555555443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.25 E-value=17 Score=28.29 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=27.7
Q ss_pred ccCCCCCCCcCcccccceeecccccccccCChhhhccCCCceEeccCC
Q 007959 107 NFYGEIPSELGNCTELQGLSLQSNYLSGSIPSELGNLSNLLNLDISSN 154 (583)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 154 (583)
.++..-...|.++++|+.+.|..+ ++.+-...|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444444556667777777766654 33344555666666666666543
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=55.71 E-value=4.7 Score=25.57 Aligned_cols=13 Identities=31% Similarity=0.631 Sum_probs=5.9
Q ss_pred eeehhhhhHHHHH
Q 007959 244 ISASATVGALLLV 256 (583)
Q Consensus 244 i~~~~~~~~~l~~ 256 (583)
+..++++|+++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3444445554444
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.16 E-value=15 Score=22.94 Aligned_cols=6 Identities=17% Similarity=0.340 Sum_probs=2.2
Q ss_pred hhhhhH
Q 007959 247 SATVGA 252 (583)
Q Consensus 247 ~~~~~~ 252 (583)
++++++
T Consensus 15 GiVvG~ 20 (38)
T 2k1k_A 15 AVIFGL 20 (38)
T ss_dssp HHHHHH
T ss_pred eeehHH
Confidence 333333
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.27 E-value=3.8e+02 Score=28.22 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHH--HHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 403 WDARLNIIMGAAK--GLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 403 ~~~~~~i~~~ia~--~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+..+..++...|- .+.|+= || +|=.++|||++.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5566666666543 455655 33 5778999999999999999999874
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=37.91 E-value=20 Score=25.11 Aligned_cols=11 Identities=27% Similarity=0.431 Sum_probs=4.2
Q ss_pred eehhhhhHHHH
Q 007959 245 SASATVGALLL 255 (583)
Q Consensus 245 ~~~~~~~~~l~ 255 (583)
+++.+++.+++
T Consensus 13 vlGg~~~lll~ 23 (70)
T 2klu_A 13 VLGGVAGLLLF 23 (70)
T ss_dssp HHHHHHHHHHH
T ss_pred HHhHHHHHHHH
Confidence 33333333333
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=36.68 E-value=1.3e+02 Score=29.04 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=71.6
Q ss_pred ceeeecCceEEEEEEEcCCcEEEEEeecccchhhHHHHHHHHHHHHhCCCCceeeeeee---------------------
Q 007959 313 HIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGY--------------------- 371 (583)
Q Consensus 313 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~--------------------- 371 (583)
+..-.|..|.++-.. ++..|+||-.. ....+.+..++...-.+.-|+..-+.-.
T Consensus 75 ~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 444556655554434 68899999552 2234445555555555555553222110
Q ss_pred -eeCCCceEEEEEcCCCCchhhHhhhc-CCCCCHHHHHHHHHHH--HHHHHHHhhcCCC-Cee-ecCCCCCCeEecCCCc
Q 007959 372 -CNSPTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGA--AKGLAYLHHDCSP-RII-HRDIKSSNILLDGNLE 445 (583)
Q Consensus 372 -~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~l~~~~~~~i~~~i--a~~l~~LH~~~~~-~iv-H~dlk~~Nill~~~~~ 445 (583)
.......+++|+|.+|..|.+.-+.. ...+... .+.++ .-+++++..+..+ +.+ +.--.+.|||++.++.
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 01122466999999876666543211 0112222 23332 2345555544222 222 1235899999986554
Q ss_pred -EEEeecCcccc
Q 007959 446 -ARVSDFGLAKL 456 (583)
Q Consensus 446 -~kl~Dfgl~~~ 456 (583)
+.++|-+++..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998864
No 461
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=26.13 E-value=20 Score=21.85 Aligned_cols=12 Identities=42% Similarity=0.744 Sum_probs=4.7
Q ss_pred hhhhhHHHHHHH
Q 007959 247 SATVGALLLVAL 258 (583)
Q Consensus 247 ~~~~~~~l~~~~ 258 (583)
+.++|.++++++
T Consensus 12 agVvglll~vii 23 (35)
T 1iij_A 12 ATVVGVLLFLIL 23 (35)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334443333333
No 462
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=23.98 E-value=94 Score=24.23 Aligned_cols=46 Identities=7% Similarity=0.021 Sum_probs=34.8
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 007959 532 QREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 577 (583)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPt~~evl~~L~ 577 (583)
..+.++.+-+.-.++.-..+.+.|..++..+|.+..|++++.+.|.
T Consensus 33 lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~ 78 (104)
T 2fq3_A 33 LPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVS 78 (104)
T ss_dssp CGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSC
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHcc
Confidence 3445554433345666678999999999999999999999987763
No 463
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=22.62 E-value=74 Score=36.17 Aligned_cols=25 Identities=28% Similarity=0.262 Sum_probs=23.0
Q ss_pred cCCCCCCeEecCCCcEEEeecCccc
Q 007959 431 RDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 431 ~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+|=.++|||++.+|++.-+|||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 6889999999999999999999774
No 464
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=21.89 E-value=1.1e+02 Score=34.56 Aligned_cols=61 Identities=21% Similarity=0.200 Sum_probs=40.4
Q ss_pred CchhhHhhhcCCCCCHHH-HHHHHHHHHH--HHHHHhhcCCCCeeecCCCCCCeEecCCCcEEEeecCccc
Q 007959 388 GSLDEALHERSEQLDWDA-RLNIIMGAAK--GLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 388 gsL~~~l~~~~~~l~~~~-~~~i~~~ia~--~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+.|.+++........|.. +..++...|- .+.|+= || +|=.++|||++.+|++.-+|||.+-
T Consensus 898 ~~L~~~f~~~~~~~~~~~ar~nF~~S~A~ysvv~YiL-----gi--gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 898 HTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFIL-----GI--GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp THHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred hHHHHHHHhcCChHHHHHHHHHHHHHhhhhhheEEEE-----ee--cCCCCcceEEeCCCCEEEEeehhhh
Confidence 356666655443445554 3455555443 355554 33 5778999999999999999999874
No 465
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.27 E-value=65 Score=21.72 Aligned_cols=17 Identities=41% Similarity=0.391 Sum_probs=8.1
Q ss_pred ceeeeehhhhhHHHHHH
Q 007959 241 RLLISASATVGALLLVA 257 (583)
Q Consensus 241 ~~~i~~~~~~~~~l~~~ 257 (583)
.+++++++++|.+++.+
T Consensus 9 ~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLML 25 (54)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34445555555544443
No 466
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=20.69 E-value=70 Score=35.80 Aligned_cols=25 Identities=28% Similarity=0.254 Sum_probs=22.9
Q ss_pred cCCCCCCeEecCCCcEEEeecCccc
Q 007959 431 RDIKSSNILLDGNLEARVSDFGLAK 455 (583)
Q Consensus 431 ~dlk~~Nill~~~~~~kl~Dfgl~~ 455 (583)
+|=.++|||++.+|++.-+|||.+-
T Consensus 788 gDRH~~NILid~tG~v~HIDFG~~f 812 (940)
T 2wxf_A 788 GDRHSDNIMIRESGQLFHIDFGHFL 812 (940)
T ss_dssp CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred CCCCcccEEEecCCCEEEEeehhhh
Confidence 6889999999999999999999764
Done!