BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007960
(583 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/609 (63%), Positives = 464/609 (76%), Gaps = 36/609 (5%)
Query: 1 MAPSKFKKAIGAVKDKTSIGLAKV-GSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSL 59
M SKFK+AIGAVKD+TS+GLAKV G S SLS+L+VAIVKATRHEE+PAEEK+IREILSL
Sbjct: 1 MGSSKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILSL 60
Query: 60 TCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRL 119
T YSR+YI+ACV+ +S+RLNKTK WTVALKTLILIQRLL EGD AYEQEIFF+TRRGTRL
Sbjct: 61 TSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGTRL 120
Query: 120 LNMSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMF--GIDEDEEEASSA 177
LNMSDFRD SRSNSWDYSAFVRTYALYLDERL+FRMQ R GKR ++ G + DEEE A
Sbjct: 121 LNMSDFRDVSRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEADEEEQDQA 180
Query: 178 PA------CARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVV 231
A R+ P+ +MK E +F RIQHLQQ+L+RFLACRPTG+A+NNRVVIVALYP+V
Sbjct: 181 AADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIVALYPIV 240
Query: 232 KESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIAR 291
KESFQIYYD+TEI+GILI+RFMEL++PDS+KVYDIFCRVSKQ++ELD FY WCK +GIAR
Sbjct: 241 KESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGIAR 300
Query: 292 SSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDNDKDAETTN-- 349
SSEYPE+E+IT KKL+LMD+FIRDKSAL +K++ + E ++DD++ E N
Sbjct: 301 SSEYPEIEKITQKKLDLMDEFIRDKSALEHTKQSKSVK----SEADEDDDEARTEEVNEE 356
Query: 350 QEDMNETKALPAP----EESTPAEEEKKEENVKQETKDTEKEADLLNLGE-DSATCDEQA 404
QEDMN KALP P E+ EEE KEE + + K E+ DLL+LG + +
Sbjct: 357 QEDMNAIKALPEPPPKEEDDVKPEEEAKEEVIIE--KKQEEMGDLLDLGNTNGGEAGQAG 414
Query: 405 DKLALALFDSGNAPVDQAGAGRTAWEAFKDETADWETALVQSASNLNHQTAALGGGFDML 464
D LALALFD G WEAFKD++ADWETALVQ+A+NL+ Q + LGGGFDML
Sbjct: 415 DSLALALFD-GPYASGSGSESGPGWEAFKDDSADWETALVQTATNLSGQKSELGGGFDML 473
Query: 465 LLDGMYQQGATAVAMASAE---ASGSASSVALGSAGRPA--MLALPAPPTTQAGA----- 514
LL+GMYQ GA A+ ++ ASGSASS+A GSAGRPA MLALPAP T A
Sbjct: 474 LLNGMYQHGAVNAAVKTSTAYGASGSASSMAFGSAGRPAATMLALPAPSTANGNAGNINS 533
Query: 515 TLPTDPFAASCAVAPPPFVQMSDLEKKQKLLVEEQLMWQQYARDGMQGQLGITKLQPNTY 574
+P DPFAAS VAPP +VQM+D+EKKQ++L+EEQ+MW QY+RDG QG + + + Q Y
Sbjct: 534 PVPMDPFAASLEVAPPAYVQMNDMEKKQRMLMEEQMMWDQYSRDGRQGHMNLRQNQNQPY 593
Query: 575 NMGGYTHGY 583
+ YT Y
Sbjct: 594 S---YTPQY 599
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/612 (59%), Positives = 456/612 (74%), Gaps = 36/612 (5%)
Query: 1 MAPSKFKKAIGAVKDKTSIGLAKVGS-SNSLSDLEVAIVKATRHEEYPAEEKHIREILSL 59
M SK K+AIGAVKD+TS+GLAKVG S+SL++LE+A+VKATRH++YPAE+K+IREIL L
Sbjct: 1 MGSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREILCL 60
Query: 60 TCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRL 119
T YSR Y+SACV +S+RLNKTKNW+VALKTLILIQRLL++GD AYEQEIFF+TRRGTRL
Sbjct: 61 TSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTRL 120
Query: 120 LNMSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDED--------- 170
LNMSDFRD S+S+SWDYSAFVRTYALYLDERL++RMQGRRGK+ G
Sbjct: 121 LNMSDFRDASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKKKSGGGGGGDGDSGEEDD 180
Query: 171 ----EEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVA 226
+ S ++ PV +MK E +F+R+QHLQQ+L+RFLACRPTG+AKNNRVVIVA
Sbjct: 181 HRGTSNDIRSKAIVVKSKPVAEMKTEKIFNRVQHLQQLLDRFLACRPTGNAKNNRVVIVA 240
Query: 227 LYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKT 286
+YP+VKESFQ+YY+ITEI+G+LI+RFMEL++ DS+KVY+IFCRVSKQ+DELD FYGWCK
Sbjct: 241 MYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWCKN 300
Query: 287 VGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDNDKDAE 346
+ +ARSSEYPE+E+IT KKL+LMD+FIRDKSALA + +N+ E+E+ + E
Sbjct: 301 MAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEEESKTEYIQE 360
Query: 347 TTNQEDMNETKALPAPEESTPAEEEKKEE---NVKQETKDTEKEADLLNLGEDSA-TCDE 402
NQED+N KALPAPE+ EEE+K E +V++ ++E DLL+L +++ T
Sbjct: 361 --NQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEVVSRQDQEGDLLDLTDEAGVTAGT 418
Query: 403 QADKLALALFDSGNAPVDQAGAGRTAWEAFKDETADWETALVQSASNLNHQTAALGGGFD 462
D LALALFD +G G WEAF D +ADWET LV+SA+ L+ Q + LGGGFD
Sbjct: 419 VGDSLALALFDGVVGTESASGPG---WEAFNDNSADWETDLVRSATRLSGQKSELGGGFD 475
Query: 463 MLLLDGMYQQGATAVAMASA---EASGSASSVALGSAGRPA--MLALPAPPTTQAG---A 514
LLLDGMYQ GA A+ ++ +SGSASSVA GSAG PA MLALPAPP T G +
Sbjct: 476 TLLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSAGSPAASMLALPAPPPTANGNRNS 535
Query: 515 TLPTDPFAASCAVAPPPFVQMSDLEKKQKLLVEEQLMWQQYARDGMQGQLGITKLQPNT- 573
+ DPFAAS VAPP +VQM+D+EKKQ+LL+EEQ+MW QY R G QG + + Q
Sbjct: 536 PVMVDPFAASLEVAPPAYVQMNDMEKKQRLLMEEQIMWDQYNRSGRQGHMNFGQNQQQQY 595
Query: 574 ----YNMGGYTH 581
Y+MG Y++
Sbjct: 596 YQLPYSMGPYSY 607
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/650 (43%), Positives = 387/650 (59%), Gaps = 97/650 (14%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCYSRA 65
+KAIG VKD+TSIG+AKV +SN DLEVAIVKAT H++ + +K+IREILSLT SR
Sbjct: 5 MRKAIGVVKDQTSIGIAKV-ASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLTSLSRG 63
Query: 66 YISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDF 125
Y+ ACV +S+RL KT++W VALK L+L+ RLL+EGDP +++EI ++TRRGTR+LNMSDF
Sbjct: 64 YVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMSDF 123
Query: 126 RDTSRSNSWDYSAFVRTYALYLDERLEFRM------------------------QGRRGK 161
RD + S+SWD+SAFVRTYA YLD+RLE + + R
Sbjct: 124 RDEAHSSSWDHSAFVRTYASYLDQRLELALFERRGRNGGGSSSSHQSNGDDGYNRSRDDF 183
Query: 162 RSM------------FGIDE------DEEEASSAPACARATPVRDMKIEHLFSRIQHLQQ 203
RS FG+ + D E + TP+R+M E +F ++ HLQ+
Sbjct: 184 RSPPPRTYDYETGNGFGMPKRSRSFGDVNEIGAREEKKSVTPLREMTPERIFGKMGHLQR 243
Query: 204 VLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKV 263
+L+RFL+CRPTG AKN+R++++A+YPVVKESF++Y DI E+L +L+D+F ++E D VK
Sbjct: 244 LLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCVKA 303
Query: 264 YDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSK 323
+D + +KQ DEL +FY WCK G+ARSSEYPEV+RIT K LE +++F+RD++ A+S
Sbjct: 304 FDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRAKS- 362
Query: 324 KNVDFQLTNEPEQEQ--DDNDKDAETTNQEDMNETKALPAPEESTPAEEEKKEENVKQET 381
PE+++ DMNE KAL + +
Sbjct: 363 ----------PERKEIEAPPAPAPPVEEPVDMNEIKAL----PPPENHTPPPPPAPEPKP 408
Query: 382 KDTEKEADLLNLGEDSATCDEQADKLALALFDSGNAPVDQAGAGRTAWEAFKDET----- 436
+ + DL+NL ED + D+Q +K ALALF P A WEAF +
Sbjct: 409 QQPQVTDDLVNLREDDVSGDDQGNKFALALF--AGPP-----ANNGKWEAFSSDNNVTSA 461
Query: 437 ----------ADWETALVQSASNLNHQTAALGGGFDMLLLDGMYQQGATAVAMASAEAS- 485
ADWE ALV++ASNL HQ AA+GGG D LLL+GMY QGA ++++E +
Sbjct: 462 WQNPAAELGKADWELALVETASNLEHQKAAMGGGLDPLLLNGMYDQGAVRQHVSTSELTG 521
Query: 486 GSASSVALGSAGR--PAMLALPAPPTTQAGATLPTDPFAASCAVAPPPFVQMSDLEKKQK 543
GS+SSVAL G+ +LALPAP T DPFAAS + PP +VQM++++KKQ
Sbjct: 522 GSSSSVALPLPGKVNSHILALPAPDGTVQKVN--QDPFAASLTIPPPSYVQMAEMDKKQY 579
Query: 544 LLVEEQLMWQQYARDGMQGQLGITKLQ----------PNTYNMGGYTHGY 583
LL +EQ +WQQY ++GM+GQ + K+ P MG GY
Sbjct: 580 LLTQEQQLWQQYQQEGMRGQASLAKMNTAQTAMPYGMPPVNGMGPSPMGY 629
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 255/421 (60%), Gaps = 38/421 (9%)
Query: 184 TPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITE 243
TP+R+M E +F ++ HLQ++L+RFL+ RPTG AKN+R++++ALYPVV+ESF++Y DI E
Sbjct: 244 TPLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICE 303
Query: 244 ILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERITY 303
+L +L+D+F ++E D VK +D + +KQ DEL +FY WCK G+ARSSEYPEV+RIT
Sbjct: 304 VLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQRITS 363
Query: 304 KKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDD--NDKDAETTNQEDMNETKALPA 361
K LE +++F+RD++ +S PE+++ + E + DMNE KAL
Sbjct: 364 KLLETLEEFVRDRAKRGKS-----------PERKEIEAPPPVVEEEEPEPDMNEIKAL-- 410
Query: 362 PEESTPAEEEKKEENVKQETKDTEKEADLLNLGEDSATCDEQADKLALALF-----DSGN 416
+ + + + DL+NL ED T D+Q +K ALALF ++G
Sbjct: 411 --PPPENYTPPPPPEPEPQPEKPQFTEDLVNLREDEVTADDQGNKFALALFAGPPGNNGK 468
Query: 417 APVDQAGAGRTAWE--AFKDETADWETALVQSASNLNHQTAALGGGFDMLLLDGMYQQGA 474
+ +AW+ A + ADWE ALV++ SNL QTAALGGGFD LLL+GMY QG
Sbjct: 469 WEAFSSNGVTSAWQNPAAEPGKADWELALVETTSNLEKQTAALGGGFDNLLLNGMYDQGM 528
Query: 475 TAVAMASAE-ASGSASSVALGSAGRP--AMLALPAPPTTQAGATLPTDPFAASCAVAPPP 531
+++++ GSASSVAL G+ +LALPAP T DPFAAS + PP
Sbjct: 529 VRQHVSTSQLTGGSASSVALPLPGKTNNQVLALPAPDGTVEKVN--QDPFAASLTIPPPS 586
Query: 532 FVQMSDLEKKQKLLVEEQLMWQQYARDGMQGQLGITKLQ---------PNTYNMGGYTHG 582
+VQM+++EKKQ LL +EQ +WQQY RDGM+GQ + K+ P MG G
Sbjct: 587 YVQMAEMEKKQYLLSQEQQLWQQYQRDGMRGQASLAKMNTGPVPAYGMPPVNGMGPPPTG 646
Query: 583 Y 583
Y
Sbjct: 647 Y 647
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 134/164 (81%), Gaps = 2/164 (1%)
Query: 1 MAPSKFKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLT 60
MAPS +KAIGAVKD+TSIG+AKV +SN DLEVAIVKAT H++ PA EK+IREIL+LT
Sbjct: 1 MAPS-IRKAIGAVKDQTSIGIAKV-ASNMAPDLEVAIVKATSHDDDPASEKYIREILNLT 58
Query: 61 CYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLL 120
SR YI ACV +S+RL+KT++W VALK L+L+ RLL+EGDP +++EI +STRRGTR+L
Sbjct: 59 SLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRML 118
Query: 121 NMSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSM 164
NMSDFRD + S+SWD+SAFVRTYA YLD+RLE + R+ S+
Sbjct: 119 NMSDFRDEAHSSSWDHSAFVRTYAGYLDQRLELALFERKSGVSV 162
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 282 bits (722), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 221/335 (65%), Gaps = 16/335 (4%)
Query: 3 PSKFKKAIGAVKDKTSIGLAKVGSSNS----LSDLEVAIVKATRH-EEYPAEEKHIREIL 57
PSK KKAIGAVKD+TSI LAKV + + L+ LEVAI+KAT H EE P +++ + EIL
Sbjct: 2 PSKLKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEIL 61
Query: 58 SLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGT 117
+ +++ ++C I +R+ +T+NW VALK+L+L+ R+ +GDP + +E+ + +RG
Sbjct: 62 GIISSKKSHAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGA 121
Query: 118 RLLNMSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSA 177
++LN+S FRD S S WD++AFVRT+ALYLDERL+ + G+ +R ++ ++++
Sbjct: 122 KILNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYT-NREQTGRISTNS 180
Query: 178 PACARATP----------VRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVAL 227
+R P VRDMK L +I + Q++L+R +A RPTG AK NR+V ++L
Sbjct: 181 TTRSRFNPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMSL 240
Query: 228 YPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTV 287
Y V++ESF +Y DI++ L +L+D F L+ + + R SKQ++EL++FY K++
Sbjct: 241 YAVMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSI 300
Query: 288 GIARSSEYPEVERITYKKLELMDDFIRDKSALAQS 322
GI R+SEYP +++I+ + LE + +F++D+S+ S
Sbjct: 301 GIGRTSEYPSIQKISLELLETLQEFLKDQSSFPAS 335
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 184/539 (34%), Positives = 279/539 (51%), Gaps = 63/539 (11%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCYSRA 65
++KA GA+KD T +GL +V S +DL+VAIVKAT H E P +++H+R+I + T +RA
Sbjct: 7 WRKAYGALKDSTKVGLVRVNSE--YADLDVAIVKATNHVECPPKDRHLRKIFAATSVTRA 64
Query: 66 Y--ISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMS 123
++ C++ +S+RL+KT+NWTVALKTLI+I RLL EGDP + +E+ ++RG R+L +S
Sbjct: 65 RADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG-RILQLS 123
Query: 124 DFRDTSRSNSWDYSAFVRTYALYLDERLE-FRM-----QGRRGKRSMFGIDEDEEEASSA 177
+F+D S +WD SA+VRTYAL+L+ERLE FR+ + R +S G D+
Sbjct: 124 NFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSR---- 179
Query: 178 PACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQI 237
RD+ E L ++ LQQ+L R + CRP G+A +N V+ AL V+KESF++
Sbjct: 180 --------TRDLDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKV 231
Query: 238 YYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPE 297
Y I + + LID+F E+ +++ +I+ R +Q L FY CK + +AR+ ++P
Sbjct: 232 YCAINDGIINLIDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPV 291
Query: 298 VERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDNDKDAETTNQEDMNETK 357
+ L M+++I++ + LT P+ D + +E +
Sbjct: 292 LREPPQSFLTTMEEYIKEAPRVVDVPAE-PLLLTYRPDDGLTTEDTEPSHEEREMLPSDD 350
Query: 358 ALPAPEESTPAEEEKKEENVKQETKDTEKEADL--LNLGEDSATCDEQADKLALALFDS- 414
+ EE+ P+ N Q DT+ DL LN G + E + LALA+ +
Sbjct: 351 VVVVSEETEPSPPPPPSANA-QNFIDTD---DLWGLNTGAPDTSVIEDQNALALAIVSTD 406
Query: 415 GNAPVDQAGAGRTAWEAFKDETADWETALVQS-ASNLNHQTA-ALGGGFDMLLLDGMYQQ 472
+ P G D T WE ALV + +S+++ T L GG D L L +Y
Sbjct: 407 ADPPTPHFGQPNN-----YDPTG-WELALVTAPSSDISASTERKLAGGLDTLTLSSLYDD 460
Query: 473 GATAVAMASAEASGSASSVALGSAGRPAMLALPAPPTTQAGATLPTDPFAASCAVAPPP 531
GA + RP A PAP + DPFA+S APPP
Sbjct: 461 GAYIASQ------------------RPVYGA-PAPNPFASH-----DPFASSNGTAPPP 495
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/491 (32%), Positives = 263/491 (53%), Gaps = 39/491 (7%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLT--CYS 63
+++A GA+KD T +GL +V S ++L+VAIVKAT H E P +++H+R+I T
Sbjct: 7 WRRAYGALKDTTKVGLVRVNSD--YAELDVAIVKATNHVECPPKDRHLRKIFLATSAIRP 64
Query: 64 RAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMS 123
RA ++ C++ +S+RL+KT+NWTVALK L++I RLL +GDP + +E+ +++G R++ +S
Sbjct: 65 RADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG-RIMQIS 123
Query: 124 DFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPACARA 183
+F+D S +WD S +VRTYAL+L+ERLE F + + + EA P +
Sbjct: 124 NFKDDSSPVAWDCSGWVRTYALFLEERLE-----------CFRVLKYDIEAERLPKVSPG 172
Query: 184 -----TPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIY 238
+ RD+ E L ++ LQQ+L R + C+P G+AK+N ++ AL V+KESF++Y
Sbjct: 173 QEKGYSKTRDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVY 232
Query: 239 YDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEV 298
I E + L+++F E+ +++K +I+ R Q L +FY CK + +AR+ ++P +
Sbjct: 233 CAINEGIINLVEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVL 292
Query: 299 ERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDNDKDAETTNQEDMNETKA 358
L M++++RD + LT P+ D E + + +
Sbjct: 293 REPPQSFLTTMEEYMRDAPQMVDVTSG-PLLLTYTPDDGLTSEDVGPSHEEHETSSPSDS 351
Query: 359 LPAP-EESTPAEEEKKEENVKQETKDTEKEADLLNLGEDS----ATCDEQADKLALALFD 413
P EE+ + + Q DT+ DLL L +D+ A D+ A LAL D
Sbjct: 352 AVVPSEETQLSSQSPPSVETPQNFIDTD---DLLGLHDDTPDPLAILDQNALALALVSND 408
Query: 414 SGNAPVDQAGAGRTAWEAFKDETADWETALVQSASN-LNHQTA-ALGGGFDMLLLDGMYQ 471
++P + +A + + WE ALV + SN ++ T L GG D L L+ +Y
Sbjct: 409 VDSSPF-------SFGQARDLDPSGWELALVTTPSNDISAATERQLAGGLDTLTLNSLYD 461
Query: 472 QGATAVAMASA 482
GA A A
Sbjct: 462 DGALRAAQQPA 472
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 289/549 (52%), Gaps = 50/549 (9%)
Query: 4 SKFKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCY- 62
+ F+KA+GA+KD T++ +AKV S DL+VAIVKAT H E +E+HIR I S T
Sbjct: 5 NSFRKAVGAIKDSTTVSIAKVNSE--FKDLDVAIVKATNHVESAPKERHIRRIFSATSVV 62
Query: 63 -SRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLN 121
RA ++ C++ ++KRL+KT+NW VA+K LI+I R L EGDP + +E+ + RG +L
Sbjct: 63 QPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG-HILR 121
Query: 122 MSDFRDTSRSNSWDYSAFVRTYALYLDERLE------FRMQGRRGKRSMFGIDEDEEEAS 175
+S+F+D + +WD SA++RTYAL+L+ERLE + ++ R + ++ + +
Sbjct: 122 ISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFNA 181
Query: 176 SAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESF 235
S + R + E L ++ LQQ+L R + C+P GSA +N ++ AL V+KESF
Sbjct: 182 S-----QTYRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESF 236
Query: 236 QIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEY 295
+IY I + + L+D F E+ D+VK +I+ R +Q + L FY +CK + +AR+ ++
Sbjct: 237 KIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQF 296
Query: 296 PEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDN------DKDAETTN 349
P + + L M+D+I++ +K +++Q E EQE+++ ++ AE N
Sbjct: 297 PTLRQPPPSFLATMEDYIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADN 356
Query: 350 QEDMNETKALPAPEESTPAEEEKKEENVKQETKDTEKEADLLNLGEDSATCDEQADK--L 407
Q++ +E EE E+ ++E+ DT+ DLL L E + E D+ L
Sbjct: 357 QKENSEGDQPLIEEEEEDQEKIEEEDAKPSFLIDTD---DLLGLNEINPKAAEIEDRNAL 413
Query: 408 ALALFDSGNAPVDQAGAGRTAWEAFKDETADWETALV------QSASNLNHQTAALGGGF 461
ALA++ G+ +A + + WE ALV + + L GGF
Sbjct: 414 ALAIYPPGH----EAPGPSNILSLIETGGSGWELALVTPQNNNNNNNPRPAPNTKLAGGF 469
Query: 462 DMLLLDGMYQQGATAVAMASAEASGSASSVALGSAGRPAMLALPAPPTTQAGATLPTDPF 521
D LLLD +Y+ SA ++ G G A P P Q DPF
Sbjct: 470 DNLLLDSLYEDD-------SARRQIQLTNAGYGHGGIDTTAAPPNPFQMQ------QDPF 516
Query: 522 AASCAVAPP 530
A S +APP
Sbjct: 517 AMSNNIAPP 525
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 197/315 (62%), Gaps = 14/315 (4%)
Query: 4 SKFKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCY- 62
+ F+KA GA+KD T++GLAKV S DL++AIVKAT H E P +E+H+R+I S T
Sbjct: 5 TSFRKAYGALKDTTTVGLAKVNSE--FKDLDIAIVKATNHVESPPKERHVRKIFSATSVI 62
Query: 63 -SRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIF-FSTRRGTRLL 120
RA ++ C++ +SKRL+KT+NW VA+K LI+I R L EGDP + +E+ +S RR +L
Sbjct: 63 QPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRR--HIL 120
Query: 121 NMSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPAC 180
+S+F+D + +WD SA+VRTYAL+L+ERLE R + E E ++ A
Sbjct: 121 RISNFKDDTSPLAWDCSAWVRTYALFLEERLE-------CYRVLKYDIEAERLPKASGAA 173
Query: 181 ARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYD 240
++ R + E L ++ LQQ+L R + C+P G+A +N ++ AL V+KESF+IY
Sbjct: 174 SKTHRTRMLSGEDLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCA 233
Query: 241 ITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVER 300
I + + L+D F E+ D+VK +I+ R +Q + L FY +CK + +AR+ ++P + +
Sbjct: 234 INDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQ 293
Query: 301 ITYKKLELMDDFIRD 315
L M+++I++
Sbjct: 294 PPPSFLATMEEYIKE 308
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 251/477 (52%), Gaps = 59/477 (12%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCYSR- 64
++ +GA+KD T++ LAKV S +L++AIVKAT H E P++E++IR I +R
Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSD--YKELDIAIVKATNHVERPSKERYIRAIFMAISATRP 68
Query: 65 -AYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMS 123
A ++ C++ +++RL++T NW VALKTLI+I R L E D + +E+ +R + +LNMS
Sbjct: 69 RADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMS 128
Query: 124 DFRDTSRSNSWDYSAFVRTYALYLDERLE-FRMQGRRGKRSMFGIDEDEEEASSAPACAR 182
F+D S N+W YSA+VR YAL+L+ERLE FR+ + ++ D
Sbjct: 129 HFKDDSGPNAWAYSAWVRFYALFLEERLECFRVLK-------YDVEVDPPR--------- 172
Query: 183 ATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDIT 242
+D+ L ++ LQ++L R L C+P G+A N ++ +AL V+ ES +IY +T
Sbjct: 173 ---TKDLDTPDLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALT 229
Query: 243 EILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERIT 302
+ + L+D+F +++ D+VK D++ R KQ L F+ CK+V + R + ++E+
Sbjct: 230 DGIDNLVDKFFDMQRNDAVKALDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPP 289
Query: 303 YKKLELMDDFIRDKSALAQSKKNVDFQLTNEPEQEQDDNDKDAETTNQEDMNETKALPAP 362
L+ M++++++ A KK Q+ E + K + A
Sbjct: 290 TSFLQAMEEYVKEAPLAAGVKKE---QVV-------------------EKLTAPKEILAI 327
Query: 363 EESTPAE--EEK--KEENVKQET-KDTEKEADLLNLGEDSATCDEQADKLALALFDSGNA 417
E P + EEK E VK E K EK+ DLL++ + + E +K ALAL
Sbjct: 328 EYEIPPKVVEEKPASPEPVKAEAEKPVEKQPDLLSMDDPAPMVSELEEKNALAL---AIV 384
Query: 418 PVDQAGAGRTAWEAFKDETADWETALVQSASNLNHQTAA---LGGGFDMLLLDGMYQ 471
PV T + + WE ALV + S+ N AA L GG D L LD +Y+
Sbjct: 385 PVSVEQPHSTT-DFTNGNSTGWELALVTAPSS-NEGAAADSKLAGGLDKLTLDSLYE 439
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 161/339 (47%), Gaps = 19/339 (5%)
Query: 4 SKFKKAIGAVKDKTSIGLAKVGSSN--SLSDLEVAIVKATRHEEYPAEEKHIREILSLTC 61
+KF++ +G KD SIG A V + N + D+EVA+V+AT H++ P ++K + EIL L
Sbjct: 7 AKFRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEILFLVS 66
Query: 62 YSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLN 121
+ I IS+RL KT++ VA KTL+L RLL + EQ++ + G +
Sbjct: 67 NTPGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSIEQQLHIAHTSGHLQIG 126
Query: 122 MSDFRDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPACA 181
S F + S S+ F++ Y YL ER+ + + + GK E S +
Sbjct: 127 CSWFMMSLDSRSF---VFLQNYVAYLQERVGW-IINQAGKL--------EPVMSGGTKFS 174
Query: 182 RATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDI 241
R ++ ++ +F + Q+ + + L C P + + +V A ++KESFQ+Y
Sbjct: 175 R---YKEKSMDLVFHILPKCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTY 231
Query: 242 TEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERI 301
++ + L+ +L P + + S+Q +L Y C+ +S +YP V+ I
Sbjct: 232 SDGMTALVSMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGFAGMKSLDYPSVQAI 291
Query: 302 TYKKLELMDDF--IRDKSALAQSKKNVDFQLTNEPEQEQ 338
+ + +++ K + S D NE +QEQ
Sbjct: 292 SMDHIVALEECSSYGGKRGFSLSTNLRDAITCNELKQEQ 330
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 152/319 (47%), Gaps = 41/319 (12%)
Query: 6 FKKAIGAVKDKTS---IGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCY 62
+K+A A+KD+ S +G ++ SS +DLE AI+KAT H++ + + +
Sbjct: 4 WKRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKWIRS 63
Query: 63 SRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNM 122
S + V IS R+N T++W VALK+L+L+ +L P+ E RR ++
Sbjct: 64 SPLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVLCCKVPSVVGEF----RRLP--FDL 117
Query: 123 SDFRD--TSRSNSWDYSAFVRTYALYLDERLEF------RMQGRRGKRSMFGIDEDEEEA 174
SDF D + S +W ++ FVRTY +L F R++G +RS+ E+
Sbjct: 118 SDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFLSDQIHRLRG-NNRRSL-------EKT 169
Query: 175 SSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKES 234
S D I+ L RIQ LQ +L+ L RP +++ A+ +V ES
Sbjct: 170 S------------DSVIQEL-ERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIES 216
Query: 235 FQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSE 294
IY I G ++ ++ V I + + Q ++L ++ +CK G++ + E
Sbjct: 217 INIY---GRICGAVMKVLPLAGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNARE 273
Query: 295 YPEVERITYKKLELMDDFI 313
P+ RI +++E ++ I
Sbjct: 274 IPQFVRIPEEEVEAIEKMI 292
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 139/303 (45%), Gaps = 37/303 (12%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLS----DLEVAIVKATRHEEYPAEEKHIREILSLTC 61
+K+A GA+KD+ + L +G S S DL+ AI+ AT H++ + + +
Sbjct: 4 WKRASGALKDRKT--LFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIR 61
Query: 62 YSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLN 121
S A + V+ +S R+N+T++W VALK L+L+ +L + QEI RR +
Sbjct: 62 SSPANLKPLVHALSSRVNRTRSWIVALKALMLVHGVLCCKVTSL-QEI----RRLP--FD 114
Query: 122 MSDFRD--TSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPA 179
+SDF D + S +W ++AF+R Y +LD+ F R + +D +E
Sbjct: 115 LSDFSDGHSRPSKTWGFNAFIRAYFSFLDQYSFFLSDQIRRRHKKPQLDSVNQE------ 168
Query: 180 CARATPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYY 239
RI+ LQ +L L RP +++ A+ VV E F IY
Sbjct: 169 ---------------LERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYG 213
Query: 240 DI-TEILGILIDRFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEV 298
I + I +LI ++V I + + Q ++L ++ +CK G++ + + P+
Sbjct: 214 RICSAIAKLLIKIHPAAGKAEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIPKF 273
Query: 299 ERI 301
I
Sbjct: 274 VTI 276
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 4 SKFKKAIGAVKDKTSIGLAKVGSSNSLS---DLEVAIVKATRHE-EYPAEEKHIREILSL 59
+ F IG +KDK S A + SSN+ S +++++AT H+ P +H+ ILS
Sbjct: 5 TSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSA 64
Query: 60 TCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEI-FFSTRRGTR 118
SRA S+ V I +RL+ T + VALK+LI+I ++ G + ++ F G
Sbjct: 65 GTGSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRN 124
Query: 119 LLNMSDFRDTSRSNSWDYSAFVRTYALYLDERL 151
L +S FRD W+ S++VR YALYL+ L
Sbjct: 125 YLKLSAFRDEKSPLMWELSSWVRWYALYLEHLL 157
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 142/358 (39%), Gaps = 53/358 (14%)
Query: 36 AIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQ 95
A+ KAT HE ++KH+ ++ T + I + + +R + +W V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNS-SWVVVFKALVTTH 83
Query: 96 RLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFR 154
L+ G+ E+ I + R T L N+S+F D S S+ +D S F+R Y+ YL+E+ +R
Sbjct: 84 HLMVHGN---ERFIQYLASRNT-LFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYR 139
Query: 155 MQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPT 214
R G D +R M E L + LQ ++ L
Sbjct: 140 QMAFDFARVKKGADGV---------------MRTMAPEKLLKSMPILQGQIDALLEFDVH 184
Query: 215 GSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQY 274
+ N V+ A + K+ +++ + + L+++F E++ +I+ R +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 275 DELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEP 334
+ F + VGI + + P++ + +E ++ Q N
Sbjct: 245 TRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLE------------------QHLNTL 285
Query: 335 EQEQDDNDKDAETTNQEDMNETKALPAP-EESTPAEEEKKEENVKQETKDTEKEADLL 391
E ++ N NE P+P +S+PA + +T DT DL
Sbjct: 286 EGKKPGN------------NEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDLF 331
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 142/358 (39%), Gaps = 53/358 (14%)
Query: 36 AIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQ 95
A+ KAT HE ++KH+ ++ T + I + + +R + +W V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNS-SWVVVFKALVTTH 83
Query: 96 RLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFR 154
L+ G+ E+ I + R T L N+S+F D S S+ +D S F+R Y+ YL+E+ +R
Sbjct: 84 HLMVHGN---ERFIQYLASRNT-LFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYR 139
Query: 155 MQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPT 214
R G D +R M E L + LQ ++ L
Sbjct: 140 QMAFDFARVKKGADGV---------------MRTMVPEKLLKSMPILQGQIDALLEFDVH 184
Query: 215 GSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQY 274
+ N V+ A + K+ +++ + + L+++F E++ +I+ R +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 275 DELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEP 334
+ F + VGI + + P++ + +E ++ Q N
Sbjct: 245 TRVSEFLKVAEQVGIDK-GDIPDLTQAPSSLMETLE------------------QHLNTL 285
Query: 335 EQEQDDNDKDAETTNQEDMNETKALPAP-EESTPAEEEKKEENVKQETKDTEKEADLL 391
E ++ N NE P+P +S+PA + +T DT D+
Sbjct: 286 EGKKPGN------------NEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDIF 331
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 141/358 (39%), Gaps = 53/358 (14%)
Query: 36 AIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQ 95
A+ KAT HE ++KH+ ++ T + I + + +R + +W V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNS-SWVVVFKALVTTH 83
Query: 96 RLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFR 154
L+ G+ E+ I + R T L N+S+F D S S+ +D S F+R Y+ YL+E+ +R
Sbjct: 84 HLMVHGN---ERFIQYLASRNT-LFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYR 139
Query: 155 MQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPT 214
R G D +R M E L + LQ ++ L
Sbjct: 140 QMAFDFARVKKGADGV---------------MRTMVPEKLLKSMPILQGQIDALLEFDVH 184
Query: 215 GSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQY 274
+ N V+ A + K+ +++ + + L+++F E++ +I+ R +
Sbjct: 185 PNELTNGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRM 244
Query: 275 DELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQLTNEP 334
+ F VGI + + P++ + +E ++ Q N
Sbjct: 245 TRVSEFLKVADEVGIDK-GDIPDLTQAPSSLMETLE------------------QHLNTL 285
Query: 335 EQEQDDNDKDAETTNQEDMNETKALPAP-EESTPAEEEKKEENVKQETKDTEKEADLL 391
E ++ N NE P+P +S+PA + +T DT D+
Sbjct: 286 EGKKPGN------------NEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDIF 331
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 40/289 (13%)
Query: 33 LEVAIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLI 92
L A+VKAT H+E + + + I S + + V++IS R+ +T++W VALK L+
Sbjct: 24 LTAAVVKATSHDELSIDTESAQFIYRHVLSSPSSLKPLVSLISSRVKRTRSWAVALKGLM 83
Query: 93 LIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRD-TSR--SNSWDYSAFVRTYALYLDE 149
L+ E G ++S F + SR S S ++ FVR Y +LD
Sbjct: 84 LMHGFFLCKSTVAES-------IGRLPFDLSSFGEGNSRIMSKSGGFNLFVRAYFAFLDR 136
Query: 150 RLEFRMQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFL 209
R G R + + EE+S R +R M+I +++ +
Sbjct: 137 RSILFHDGNRHRYN--------EESS---VLIRLVIIRKMQI------------IVDSLI 173
Query: 210 ACRPTGSAKNNRVVIVALYPVVKESFQIY----YDITEILGILIDRFMELEVPDSVKVYD 265
+P G V+ A+ VV E +IY I E+L + + + E ++K
Sbjct: 174 RIKPIGENMMIPVINEAMENVVSEIMEIYGWICRRIAEVLPNVHSKIGKTEADLALK--- 230
Query: 266 IFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIR 314
I + KQ EL ++ +CK +G++ + E P RI + +D+ +R
Sbjct: 231 IVAKSMKQGGELKKYFEFCKDLGVSNAQEIPNFVRIPEADVIHLDELVR 279
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 37 IVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQR 96
+ KAT HE ++KH+ ++ T I + + +R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 97 LLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFRM 155
L+ G+ E+ I + R T L N+S+F D S +D S F+R Y+ YL+E+ + +R
Sbjct: 85 LMVYGN---ERFIQYLASRNT-LFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ 140
Query: 156 QG---RRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACR 212
+ KR G+ +R M E L + +Q ++ L
Sbjct: 141 VAFDFTKVKRGADGV------------------MRTMNTEKLLKTVPIIQNQMDALLDFN 182
Query: 213 PTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSK 272
+ N V+ A + K++ +++ E + L++++ +++ + DI+ +
Sbjct: 183 VNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLT 242
Query: 273 QYDELDSFYGWCKTVGIAR 291
+ + F + VGI R
Sbjct: 243 RMTRISEFLKVAEQVGIDR 261
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 37 IVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQR 96
+ KAT HE ++KH+ ++ T I + + +R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 97 LLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFRM 155
L+ G+ E+ I + R T L N+S+F D S +D S F+R Y+ YL+E+ + +R
Sbjct: 85 LMVYGN---ERFIQYLASRNT-LFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ 140
Query: 156 QG---RRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACR 212
+ KR G+ +R M E L + +Q ++ L
Sbjct: 141 VAFDFTKVKRGADGV------------------MRTMNTEKLLKTVPIIQNQMDALLDFN 182
Query: 213 PTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSK 272
+ N V+ A + K++ +++ E + L++++ +++ + DI+ +
Sbjct: 183 VNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLT 242
Query: 273 QYDELDSFYGWCKTVGIAR 291
+ + F + VGI R
Sbjct: 243 RMTRISEFLKVAEQVGIDR 261
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 37 IVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQR 96
+ KAT HE ++KH+ ++ T I + + +R + +W V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNS-SWVVVFKSLITTHH 84
Query: 97 LLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER-LEFRM 155
L+ G+ E+ I + R T L N+S+F D S +D S F+R Y+ YL+E+ + +R
Sbjct: 85 LMVYGN---ERFIQYLASRNT-LFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ 140
Query: 156 QG---RRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACR 212
+ KR G+ +R M E L + +Q ++ L
Sbjct: 141 VAFDFTKVKRGADGV------------------MRTMNTEKLLKTVPIIQNQMDALLDFN 182
Query: 213 PTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSK 272
+ N V+ A + K++ +++ E + L++++ +++ + DI+ +
Sbjct: 183 VNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLT 242
Query: 273 QYDELDSFYGWCKTVGIAR 291
+ + F + VGI R
Sbjct: 243 RMTRISEFLKVAEQVGIDR 261
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 31 SDLEVAIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKT 90
S L I KAT E ++KH+ +L T I + N++ +R + NWTV K
Sbjct: 35 SQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANLLIER-TQNPNWTVVYKA 93
Query: 91 LILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRD-TSRSNSWDYSAFVRTYALYLDE 149
LI I ++ G+ + Q + ++ T N++ F D + +D S VR YA Y+ E
Sbjct: 94 LITIHNIMCYGNERFSQ--YLASCNTT--FNLTAFVDKVGGAGGYDMSTHVRRYAKYIGE 149
Query: 150 RLE-FRM------QGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQ 202
++ +RM + +RG+ +R M + L I LQ
Sbjct: 150 KINTYRMCAFDFCKVKRGREDGL--------------------LRTMHTDKLLKTIPILQ 189
Query: 203 QVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVK 262
++ L T S NN V+ + + ++ +++ + + +++++ ++
Sbjct: 190 NQIDALLEFSVTTSELNNGVINCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRD 249
Query: 263 VYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERITYKKLELMD 310
D + + D++ F ++VGI R E P++ R LE ++
Sbjct: 250 ALDTYKSFLTRLDKVAEFLRVAESVGIDR-GEIPDLTRAPASLLEALE 296
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 33 LEVAIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLI 92
L ++ KAT E ++KH+ ++ T I N++ +R ++ NW V K+LI
Sbjct: 24 LAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLIER-SQNANWVVVYKSLI 82
Query: 93 LIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSN-----------SWDYSAFVR 141
L++ G+ + Q + ++ T N+S F D +D S F+R
Sbjct: 83 TTHHLMAYGNERFMQ--YLASSNST--FNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIR 138
Query: 142 TYALYLDER-LEFRMQG------RRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHL 194
YA YL+E+ L +R +RGK EE S +R M E L
Sbjct: 139 RYAKYLNEKSLSYRAMAFDFCKVKRGK----------EEGS----------LRSMNAEKL 178
Query: 195 FSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFME 254
+ LQ L+ L + +N V+ ++ + ++ +++ + + L++++ +
Sbjct: 179 LKTLPVLQAQLDALLEFDCQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFD 238
Query: 255 LEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVER 300
+ + D++ + + D + F + VGI + + P++ +
Sbjct: 239 MNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGIDK-GDIPDLTK 283
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 135/314 (42%), Gaps = 55/314 (17%)
Query: 6 FKKAIGAVKDKTSIGLAKVGSSNSLSDLEVAIVKATRHEEYPAEEKHIREILSLTCYSRA 65
+++ GA+KDK S+ A + A++KAT H + + ++++ I + +
Sbjct: 8 WRRVSGAIKDKLSLITA------TDEKFTAAVIKATSHNDVSMDIENVQFIYRYIQSNPS 61
Query: 66 YISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDF 125
+ +S R+ T+NWTVALK L+L+ L G + G ++S F
Sbjct: 62 SFKPIIRAVSLRVEHTRNWTVALKCLMLLHGLFFSGIMTVDSI-------GRLPFDLSGF 114
Query: 126 --RDTSRSNSWDYSAFVRTYALYLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPACARA 183
R + S + ++ FVR Y ++LDE RS+ +++
Sbjct: 115 GRRKSRFSRTGRFNIFVRAYFMFLDE------------RSILYYNKNM------------ 150
Query: 184 TPVRDMKIEHLFSRIQHLQQVLERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITE 243
+++E I +Q++++ + +P G +VI A+ V+ E I I
Sbjct: 151 -----IRLEI----IVKMQRIVDSLMRIKPIGETP---LVIEAMEYVISEVVLINGHICR 198
Query: 244 -ILGILID---RFMELEVPDSVKVYDIFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVE 299
G L D +E+ ++ +I + Q ++L ++ +C+ G+ + E +
Sbjct: 199 GFAGFLSDVQSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRGFGVTNAQETSNIL 258
Query: 300 RITYKKLELMDDFI 313
RIT ++ ++D +
Sbjct: 259 RITESQMIVLDKLL 272
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 137/292 (46%), Gaps = 29/292 (9%)
Query: 30 LSDLEVAIVK-ATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVAL 88
+S L +VK AT+ + P ++K++ ILS T +R + + + RL+ T WT+
Sbjct: 1 MSSLYTKLVKGATKIKMAPPKQKYVDPILSGTSSARG-LQEITHALDIRLSDTA-WTIVY 58
Query: 89 KTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSW---DYSAFVRTYAL 145
K LI++ ++ +G E+++ + R + L++ R S + W D A R Y
Sbjct: 59 KALIVLHLMIQQG----EKDV--TLRHYSHNLDVFQLRKISHTTKWSSNDMRALQR-YDE 111
Query: 146 YLDERLEFRMQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVL 205
YL R E GR G+D + SS ++ D +++H ++ L+ +
Sbjct: 112 YLKTRCE--EYGR------LGMDHLRDNYSSLKLGSKNQLSMDEELDH----VESLEIQI 159
Query: 206 ERFLACRPTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYD 265
+ + + S N +++ A +V++ +Y + E + L++ F EL + + + D
Sbjct: 160 NALIRNKYSVSDLENHLLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLD 219
Query: 266 IFCRVSKQYDELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKS 317
++ K + ++ + +G A + P ++ IT K + +++ +R+++
Sbjct: 220 LY----KDFVDMTEYVVRYLKIGKAVGLKIPVIKHITTKLINSLEEHLREET 267
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 152/362 (41%), Gaps = 44/362 (12%)
Query: 34 EVAIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLIL 93
E A+ KAT+ + + KH+ IL T + + + +RL K ++WT+ KTLI+
Sbjct: 11 ERAVKKATKVKLAAPKYKHVEIILEATTEDPETLENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 94 IQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDERLEF 153
+L EG P R +L S + N ++YS F L ER
Sbjct: 70 FHVMLKEGAPNTTIVALSQRPRILEVLKASSLLAQGK-NIYNYSRF-------LSERA-- 119
Query: 154 RMQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEH-LFSRIQHLQQVLERFLACR 212
+ GR G D + AP +R+MK+E+ L ++ +Q L R + C+
Sbjct: 120 KQYGRLGV--------DYAQVGDAPKKK----IREMKLENGLLRNVEGIQAQLRRLIKCQ 167
Query: 213 PTGSAKNNRVVIVALYPVVKESFQIYYDITEILGIL--IDRFMELEVPDSVKVYDIFCRV 270
+N + I A +V + ++ + +G++ ++ + E+ D+ + I+
Sbjct: 168 FVAEEIDNDIAITAFRLLVGDLLVLFKAVN--IGVINVLEHYFEMGHHDAAQSLRIYKTF 225
Query: 271 SKQYDELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFIRDKSALAQSKKNVDFQL 330
Q +++ ++ +++ P ++ +++++ D DF+
Sbjct: 226 VNQTEDIINYLSTARSLEFVTKFPVPNIKHAPISLTASLEEYLNDP----------DFE- 274
Query: 331 TNEPEQEQDDNDKDAETT----NQEDMNETKALPAPEESTPAEEEKKEENVKQETKDTEK 386
N + Q+ + E T + + + K++P + + + +KE V+QE +E+
Sbjct: 275 ENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNES-SSTIQKENTVQQEASSSEE 333
Query: 387 EA 388
EA
Sbjct: 334 EA 335
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 10 IGAVKDKTSIGLAKV---GSSNSLSDLEVAIVKAT-RHEEYPAEEKHIREILSLTCYSRA 65
IG KDK SIG A++ S ++ + +A++K+T R P ++ ++S YS +
Sbjct: 9 IGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVIS---YSNS 65
Query: 66 -YISACVNIISKRLNKTKNWTVALKTLILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSD 124
Y A + RL TKN VA K+LI+I +L+ +E G L +++
Sbjct: 66 RYAPAAFSAALWRLRVTKNAIVATKSLIVIHKLIKSSRDKFE-----GLGHGRNNLKLNE 120
Query: 125 FRDTSRSNSWDYSAFVRTYALYLD 148
F D S + + + S ++R Y YLD
Sbjct: 121 FSDKSSNLTLELSQWIRWYGQYLD 144
>sp|P33338|SLA2_YEAST Protein SLA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SLA2 PE=1 SV=5
Length = 968
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 105/263 (39%), Gaps = 29/263 (11%)
Query: 31 SDLEVAIVKATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKT 90
SDL+ A+ KA EE + KH+R + T ++ S V K L + K
Sbjct: 6 SDLQKALKKACSVEETAPKRKHVRACIVYTWDHQS--SKAVFTTLKTLPLANDEVQLFKM 63
Query: 91 LILIQRLLSEGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDER 150
LI++ +++ EG P+ E R R L S YS +R Y YL +
Sbjct: 64 LIVLHKIIQEGHPSALAEAI-RDRDWIRSLG------RVHSGGSSYSKLIREYVRYLVLK 116
Query: 151 LEFRMQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERF-- 208
L+F R F E EE S + + P D E + + LQ L+ F
Sbjct: 117 LDFHAHHRGFNNGTF---EYEEYVS---LVSVSDP--DEGYETILD-LMSLQDSLDEFSQ 167
Query: 209 -LACRPTGSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDS---VKVY 264
+ +N I AL P++ ES+ IY IT +L R M ++ D+ +
Sbjct: 168 IIFASIQSERRNTECKISALIPLIAESYGIYKFITSML-----RAMHRQLNDAEGDAALQ 222
Query: 265 DIFCRVSKQYDELDSFYGWCKTV 287
+ R Q+ L FY C +V
Sbjct: 223 PLKERYELQHARLFEFYADCSSV 245
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 40 ATRHEEYPAEEKHIREILSLTCYSRAYISACVNIISKRLNKTKNWTVALKTLILIQRLLS 99
AT+ + P ++K++ IL T + V + R+N T WT+ K+L+++ ++
Sbjct: 11 ATKIKSAPPKQKYLDPILLGTSNEEDFYE-IVKGLDSRINDTA-WTIVYKSLLVVHLMIR 68
Query: 100 EGDPAYEQEIFFSTRRGTRLLNMSDFRDTSRSNSWDYSAFVRTYALYLDERL-EF----R 154
EG + R ++ + R ++ S S D A R Y YL R EF +
Sbjct: 69 EGSKDVALRYY---SRNLEFFDIENIRGSNGSASGDMRALDR-YDNYLKVRCREFGKIKK 124
Query: 155 MQGRRGKRSMFGIDEDEEEASSAPACARATPVRDMKIEHLFSRIQHLQQVLERFLACRPT 214
R G R++ + S +R + I ++ L+ ++ + + T
Sbjct: 125 DYVRDGYRTL-------KLNSGNYGSSRN---KQHSINIALDHVESLEVQIQALIKNKYT 174
Query: 215 GSAKNNRVVIVALYPVVKESFQIYYDITEILGILIDRFMELEVPDSVKVYDIFCRVSKQY 274
+N ++I ++++ +Y + E + L++ F EL ++ + D++
Sbjct: 175 QYDLSNELIIFGFKLLIQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYKTFVDLT 234
Query: 275 DELDSFYGWCKTVGIARSSEYPEVERITYKKLELMDDFI 313
+ + + KT G+ + P ++ IT K + +++ +
Sbjct: 235 EHVVRYLKSGKTAGL----KIPVIKHITTKLVRSLEEHL 269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,461,743
Number of Sequences: 539616
Number of extensions: 8959604
Number of successful extensions: 52681
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 650
Number of HSP's that attempted gapping in prelim test: 44551
Number of HSP's gapped (non-prelim): 5281
length of query: 583
length of database: 191,569,459
effective HSP length: 123
effective length of query: 460
effective length of database: 125,196,691
effective search space: 57590477860
effective search space used: 57590477860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)