BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007967
(583 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 162/233 (69%), Gaps = 13/233 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG------FEESAIGSI 54
MS HPN++ Y SFVV LW+VM ++ GS L ++K G +ES I +I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGD--RQRSRNTF 112
L+E L+ L+YLH+ G IHRDVKAGNILL +G V++ADFGVSA + GD R + R TF
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPG 172
VGTPCWMAPEV++ GY+ KADIWSFGITA+ELA G AP+ KYPPMKVL++T+QN PP
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 173 L-----DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
L D + KK+ KSF++M+++CL KD KRPTA +LL+H FF+ AK E
Sbjct: 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 161/229 (70%), Gaps = 13/229 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG------FEESAIGSI 54
MS HPN++ Y SFVV LW+VM ++ GS L ++K G +ES I +I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGD--RQRSRNTF 112
L+E L+ L+YLH+ G IHRDVKAGNILL +G V++ADFGVSA + GD R + R TF
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPG 172
VGTPCWMAPEV++ GY+ KADIWSFGITA+ELA G AP+ KYPPMKVL++T+QN PP
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 173 L-----DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAK 216
L D + KK+ KSF++M+++CL KD KRPTA +LL+H FF+ AK
Sbjct: 242 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 138/212 (65%), Gaps = 11/212 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D V + Y S++ S LW++M ++ GS L L++ F+E I ++LKE LK
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILK 131
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL G VKLADFGV+ + DT Q RNTFVGTP WMA
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNTFVGTPFWMA 188
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+Q S Y+SKADIWS GITA+ELA G P S PM+VL + +N PP L D
Sbjct: 189 PEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGD---- 243
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
F+KSFKE + CL KD + RPTA++LLKH F
Sbjct: 244 FTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 141/212 (66%), Gaps = 11/212 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D P V + Y S++ D+ LW++M ++ GS L L++ D E+ I +IL+E LK
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILREILK 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL +G VKLADFGV+ + DT Q RNTFVGTP WMA
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMA 172
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV++ S Y+SKADIWS GITA+ELA G P S+ PMKVL + +N PP L+ +
Sbjct: 173 PEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---- 227
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+SK KE V CL K+ + RPTA++LLKH F
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 141/212 (66%), Gaps = 11/212 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D P V + Y S++ D+ LW++M ++ GS L L++ D E+ I +IL+E LK
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILREILK 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL +G VKLADFGV+ + DT Q RNTFVGTP WMA
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMA 192
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV++ S Y+SKADIWS GITA+ELA G P S+ PMKVL + +N PP L+ +
Sbjct: 193 PEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---- 247
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+SK KE V CL K+ + RPTA++LLKH F
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 140/212 (66%), Gaps = 11/212 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D P V + Y S++ D+ LW++M ++ GS L L++ D E+ I +IL+E LK
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILREILK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL +G VKLADFGV+ + DT Q RN FVGTP WMA
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMA 187
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV++ S Y+SKADIWS GITA+ELA G P S+ PMKVL + +N PP L+ +
Sbjct: 188 PEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---- 242
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+SK KE V CL K+ + RPTA++LLKH F
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 140/212 (66%), Gaps = 11/212 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D P V + Y S++ D+ LW++M ++ GS L L++ D E+ I +IL+E LK
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD---ETQIATILREILK 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL +G VKLADFGV+ + DT Q RN FVGTP WMA
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMA 172
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV++ S Y+SKADIWS GITA+ELA G P S+ PMKVL + +N PP L+ +
Sbjct: 173 PEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN---- 227
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+SK KE V CL K+ + RPTA++LLKH F
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 136/211 (64%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S D P + R + S++ + LW++M ++ GS L L+K EE+ I +IL+E LK
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILK 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
LDYLH + IHRD+KA N+LL G VKLADFGV+ + DT Q RN FVGTP WMA
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNXFVGTPFWMA 184
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV++ S Y+ KADIWS GITA+ELA G P S PM+VL + +N+PP L + +
Sbjct: 185 PEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTL----EGQ 239
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
SK FKE V CL KD RPTA++LLKH F
Sbjct: 240 HSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 133/216 (61%), Gaps = 7/216 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M D P+V++ Y S+ +++LW+VM + GS ++++ + E I +IL+ TLK
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLK 136
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L+YLH IHRD+KAGNILL+T G KLADFGV+ + D RN +GTP WMA
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL---TDXMAKRNXVIGTPFWMA 193
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+Q GYN ADIWS GITA+E+A G P++ PM+ + M N PP + + +
Sbjct: 194 PEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP--TFRKPEL 250
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAK 216
+S +F + V CLVK +R TA +LL+H F + AK
Sbjct: 251 WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 133/233 (57%), Gaps = 17/233 (7%)
Query: 6 HPNVIRAYCSFV------VDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
H N+ Y +F+ +D LW+VM F GS L+K + +E I I +E L
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ L +LH+ IHRD+K N+LL N VKL DFGVSA + T R RNTF+GTP WM
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWM 196
Query: 120 APEVL----QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
APEV+ P + Y+ K+D+WS GITA+E+A G P PM+ L + +N P L
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL-- 254
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFAD 228
+ KK+SK F+ + CLVK+ ++RP E+L+KH F + +P E V+ D
Sbjct: 255 -KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD-QPNERQVRIQLKD 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 131/211 (62%), Gaps = 10/211 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
DHPN+++ +F ++NLW+++ F A G+ +M + + ES I + K+TL AL+Y
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNY 150
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH IHRD+KAGNIL +G +KLADFGVSA +T QR R++F+GTP WMAPEV+
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDSFIGTPYWMAPEVV 207
Query: 125 QPGSG----YNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
+ Y+ KAD+WS GIT +E+A P + PM+VLL ++ PP L + +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSR 265
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
+S +FK+ + CL K+ R T +LL+H F
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 131/211 (62%), Gaps = 10/211 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
DHPN+++ +F ++NLW+++ F A G+ +M + + ES I + K+TL AL+Y
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNY 150
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH IHRD+KAGNIL +G +KLADFGVSA +T QR R++F+GTP WMAPEV+
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQR-RDSFIGTPYWMAPEVV 207
Query: 125 QPGSG----YNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
+ Y+ KAD+WS GIT +E+A P + PM+VLL ++ PP L + +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSR 265
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
+S +FK+ + CL K+ R T +LL+H F
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 9/211 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
DHPN+++ +F ++NLW+++ F A G+ +M + + ES I + K+TL AL+Y
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNY 123
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH IHRD+KAGNIL +G +KLADFGVSA +T + R++F+GTP WMAPEV+
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 125 QPGSG----YNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
+ Y+ KAD+WS GIT +E+A P + PM+VLL ++ PP L + +
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSR 239
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
+S +FK+ + CL K+ R T +LL+H F
Sbjct: 240 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
DHPN+++ +F ++NLW+++ F A G+ +M + + ES I + K+TL AL+Y
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNY 150
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH IHRD+KAGNIL +G +KLADFGVSA +T QR R+ F+GTP WMAPEV+
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDXFIGTPYWMAPEVV 207
Query: 125 QPGSG----YNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
+ Y+ KAD+WS GIT +E+A P + PM+VLL ++ PP L + +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSR 265
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
+S +FK+ + CL K+ R T +LL+H F
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 126/260 (48%), Gaps = 46/260 (17%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L +HPN++ +F+ D+ LWVV FMA GS L+ + DG E AI IL+ LKAL
Sbjct: 66 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 125
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF----VGTPCW 118
DY+H G++HR VKA +IL+ +G V L+ + M G RQR + F V W
Sbjct: 126 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 185
Query: 119 MAPEVLQPG-SGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGL---- 173
++PEVLQ GY++K+DI+S GITA ELA+GH PF P ++LL + P L
Sbjct: 186 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 245
Query: 174 -------------------------------------DYDRDKKFSKSFKEMVAMCLVKD 196
+ + FS F V CL ++
Sbjct: 246 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 305
Query: 197 QTKRPTAEKLLKHSFFKHAK 216
RP+A LL HSFFK K
Sbjct: 306 PDARPSASTLLNHSFFKQIK 325
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 126/260 (48%), Gaps = 46/260 (17%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L +HPN++ +F+ D+ LWVV FMA GS L+ + DG E AI IL+ LKAL
Sbjct: 82 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF----VGTPCW 118
DY+H G++HR VKA +IL+ +G V L+ + M G RQR + F V W
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 201
Query: 119 MAPEVLQPG-SGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGL---- 173
++PEVLQ GY++K+DI+S GITA ELA+GH PF P ++LL + P L
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261
Query: 174 -------------------------------------DYDRDKKFSKSFKEMVAMCLVKD 196
+ + FS F V CL ++
Sbjct: 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321
Query: 197 QTKRPTAEKLLKHSFFKHAK 216
RP+A LL HSFFK K
Sbjct: 322 PDARPSASTLLNHSFFKQIK 341
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 120/212 (56%), Gaps = 9/212 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
+PN++ S++V LWVVM ++A GS L + + +E I ++ +E L+AL++L
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H IHRD+K+ NILL +G VKL DFG A Q R+T VGTP WMAPEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y K DIWS GI A+E+ G P+ P++ L + N P L +K S F
Sbjct: 190 R-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIF 246
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
++ + CL D KR +A++LL+H F K AKP
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
+PN++ S++V LWVVM ++A GS L + + +E I ++ +E L+AL++L
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H IHRD+K+ NILL +G VKL DFG A Q R+ VGTP WMAPEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVT 189
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y K DIWS GI A+E+ G P+ P++ L + N P L +K S F
Sbjct: 190 R-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIF 246
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
++ + CL D KR +A++LL+H F K AKP
Sbjct: 247 RDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 9/212 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
+PN++ S++V LWVVM ++A GS L + + +E I ++ +E L+AL++L
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H IHR++K+ NILL +G VKL DFG A Q R+T VGTP WMAPEV+
Sbjct: 134 HSNQVIHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVT 190
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y K DIWS GI A+E+ G P+ P++ L + N P L +K S F
Sbjct: 191 R-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIF 247
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
++ + CL D KR +A++L++H F K AKP
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
+PN++ S++V LWVVM ++A GS L + + +E I ++ +E L+AL++L
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H IHRD+K+ NILL +G VKL DFG A Q R+ VGTP WMAPEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSEMVGTPYWMAPEVVT 189
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y K DIWS GI A+E+ G P+ P++ L + N P L +K S F
Sbjct: 190 R-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIF 246
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
++ + CL D KR +A++LL+H F K AKP
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
+PN++ S++V LWVVM ++A GS L + + +E I ++ +E L+AL++L
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H IHRD+K+ NILL +G VKL DFG A Q R+ VGTP WMAPEV+
Sbjct: 134 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVT 190
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y K DIWS GI A+E+ G P+ P++ L + N P L +K S F
Sbjct: 191 R-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIF 247
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
++ + CL D KR +A++L++H F K AKP
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 207 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 263
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 320
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 321 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 377
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 378 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 130 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 186
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 243
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 244 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 300
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 301 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 143
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 144 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 200
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 201 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 257
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 258 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 141
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 198
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 199 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 255
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 256 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 288
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 132
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 189
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 190 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 246
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 247 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL L
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIAAVCLAVLQALSVL 136
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A + R R VGTP WMAPE++
Sbjct: 137 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAPELIS 193
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
Y + DIWS GI +E+ G P+ PP+K + M N PP L K S S
Sbjct: 194 -RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSL 250
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
K + LV+D +R TA +LLKH F A PP
Sbjct: 251 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 283
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 127/215 (59%), Gaps = 10/215 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
++ DHP +++ ++ D LW+++ F G+ +M + G E I + ++ L+
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL++LH + IHRD+KAGN+L+ G ++LADFGVSA T + R++F+GTP WMA
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQKRDSFIGTPYWMA 185
Query: 121 PEVL----QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
PEV+ + Y+ KADIWS GIT +E+A P + PM+VLL ++ PP L
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--L 243
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
K+S F++ + + L K+ RP+A +LL+H F
Sbjct: 244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 127/215 (59%), Gaps = 10/215 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
++ DHP +++ ++ D LW+++ F G+ +M + G E I + ++ L+
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL++LH + IHRD+KAGN+L+ G ++LADFGVSA T + R++F+GTP WMA
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQKRDSFIGTPYWMA 177
Query: 121 PEVL----QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
PEV+ + Y+ KADIWS GIT +E+A P + PM+VLL ++ PP L
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--L 235
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
K+S F++ + + L K+ RP+A +LL+H F
Sbjct: 236 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 11/218 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWVVM F+ G+ L I E I ++ L+AL YL
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGA---LTDIVTHTRMNEEQIATVCLSVLRALSYL 157
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL ++G +KL+DFG A R VGTP WMAPEV+
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA---QVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD-KKFSKS 184
Y ++ DIWS GI +E+ G P+ PP++ + + PP + +D K S
Sbjct: 215 -RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRV---KDLHKVSSV 270
Query: 185 FKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
+ + + LV++ ++R TA++LL H F K A PP V
Sbjct: 271 LRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIV 308
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN I+ ++ + W+VM + GS L+++ ++ +E I ++ L+ L
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLA 168
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRDVKAGNILL G+VKL DFG ++ M N FVGTP WMAPEV
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWMAPEV 221
Query: 124 L--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
+ Y+ K D+WS GIT +ELA P M L QN P L + +
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHW 278
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
S+ F+ V CL K RPT+E LLKH F +PP
Sbjct: 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 315
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN I+ ++ + W+VM + GS L+++ ++ +E I ++ L+ L
Sbjct: 72 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLA 129
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRDVKAGNILL G+VKL DFG ++ M N FVGTP WMAPEV
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWMAPEV 182
Query: 124 L--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
+ Y+ K D+WS GIT +ELA P M L QN P L + +
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHW 239
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
S+ F+ V CL K RPT+E LLKH F +PP
Sbjct: 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 9/217 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NV+ Y S++V LWV+M F+ G+ L I Q E I ++ + L+AL YL
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGA---LTDIVSQVRLNEEQIATVCEAVLQALAYL 157
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG IHRD+K+ +ILL +G VKL+DFG A R VGTP WMAPEV+
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA---QISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
S Y ++ DIWS GI +E+ G P+ P++ + + PP L K S
Sbjct: 215 -RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL--KNSHKVSPVL 271
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
++ + LV+D +R TA++LL H F PE V
Sbjct: 272 RDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLV 308
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 14/231 (6%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D P +++ + +F+ ++++++ M M G+C +K Q E +G + +KAL Y
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 65 L-HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
L + G IHRDVK NILLD G +KL DFG+S + D + RS G +MAPE
Sbjct: 140 LKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCAAYMAPER 195
Query: 124 LQP----GSGYNSKADIWSFGITALELAHGHAPFSKYPP-MKVLLMTIQNAPPGLDYDRD 178
+ P Y+ +AD+WS GI+ +ELA G P+ +VL +Q PP L
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL--PGH 253
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
FS F+ V CL KD KRP KLL+HSF K + E+ V F D+
Sbjct: 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDV 304
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 13/216 (6%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAY---QDGFEESAIGSILKETLKA 61
D P +++ Y + + + W+ M M+ S K Y D E +G I T+KA
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 62 LDYLHRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L++L I HRD+K NILLD +G +KL DFG+S + D+ + R G +MA
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD----AGCRPYMA 193
Query: 121 PEVLQPGS---GYNSKADIWSFGITALELAHGHAPFSKYPPM-KVLLMTIQNAPPGLDYD 176
PE + P + GY+ ++D+WS GIT ELA G P+ K+ + L ++ PP L
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+++FS SF V +CL KD++KRP ++LLKH F
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 15/219 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKET 58
M +D P + Y + + ++W+ M M + S K G E +G I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 59 LKALDYLH-RQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+KAL++LH + IHRDVK N+L++ G VK+ DFG+S + D+ ++ G
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS----VAKTIDAGCKP 218
Query: 118 WMAPEVLQP---GSGYNSKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTIQNAPPGL 173
+MAPE + P GY+ K+DIWS GIT +ELA P+ + P + L ++ P L
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
D KFS F + + CL K+ +RPT +L++H FF
Sbjct: 279 PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 118/218 (54%), Gaps = 18/218 (8%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 123
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D N FVGT +M+PE L
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----EMANEFVGTRSYMSPERL 178
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKV--LLMTIQNAPPGLDYDRDKKFS 182
Q G+ Y+ ++DIWS G++ +E+A G P PPM + LL I N PP FS
Sbjct: 179 Q-GTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP--PKLPSAVFS 232
Query: 183 KSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
F++ V CL+K+ +R ++L+ H+F K + E+
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 270
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 122/230 (53%), Gaps = 32/230 (13%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 120
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 175
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF-------SKYPPMKV--LLMTIQNAPP---- 171
Q G+ Y+ ++DIWS G++ +E+A G P PPM + LL I N PP
Sbjct: 176 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLP 234
Query: 172 -GLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
G+ FS F++ V CL+K+ +R ++L+ H+F K + E+
Sbjct: 235 SGV-------FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 277
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 15/219 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKET 58
M +D P + Y + + ++W+ M M + S K G E +G I
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 59 LKALDYLH-RQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+KAL++LH + IHRDVK N+L++ G VK+ DFG+S + D +++ G
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----DVAKDIDAGCKP 174
Query: 118 WMAPEVLQP---GSGYNSKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTIQNAPPGL 173
+MAPE + P GY+ K+DIWS GIT +ELA P+ + P + L ++ P L
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 234
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
D KFS F + + CL K+ +RPT +L++H FF
Sbjct: 235 PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 26/224 (11%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 139
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 140 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 194
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF-SKYPPMKV--LLMTIQNAPP-----GLDYD 176
Q G+ Y+ ++DIWS G++ +E+A G P S M + LL I N PP G+
Sbjct: 195 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGV--- 250
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
FS F++ V CL+K+ +R ++L+ H+F K + E+
Sbjct: 251 ----FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 290
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 123/239 (51%), Gaps = 16/239 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+DHPN+++ Y F N ++VM G +I ++ F E I+K+ L
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD--EIIHRMKFNEVDAAVIIKQVLS 147
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+ YLH+ +HRD+K N+LL++ + ++K+ DFG+SA +F+ + + R +GT
Sbjct: 148 GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKKMKER---LGTAY 203
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
++APEVL+ Y+ K D+WS G+ L G+ PF ++ L ++ D
Sbjct: 204 YIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYTFDSPE 260
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRV 236
K S+ K+++ L D +R +A++ L+H + K S K+ +LP L N +
Sbjct: 261 WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM----CSKKESGIELPSLANAI 315
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+I+ + F ++V F G +I + F+E +I+K+ L +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE--QIINRHKFDECDAANIMKQILSGIC 160
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV---VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH+ +HRD+K NILL+ +K+ DFG+S+ F + R R +GT ++A
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKDYKLRDR---LGTAYYIA 216
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ YN K D+WS G+ L G+ PF + + ++ D++ K
Sbjct: 217 PEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-IKKVEKGKYYFDFNDWKN 273
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
S KE++ + L D KR TAE+ L + K
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 52/256 (20%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 183
Query: 67 RQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
+ I HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE LQ
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQ 238
Query: 126 PGSGYNSKADIWSFGITALELAHGHAP--------------------------------- 152
G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 239 -GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 297
Query: 153 -FSKY-----PPMKV--LLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAE 204
S Y PPM + LL I N PP FS F++ V CL+K+ +R +
Sbjct: 298 PLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVNKCLIKNPAERADLK 355
Query: 205 KLLKHSFFKHAKPPEL 220
+L+ H+F K + E+
Sbjct: 356 QLMVHAFIKRSDAEEV 371
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ + P V++ +C+F D L++VM +M G ++LM E E +
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVL 185
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
ALD +H G IHRDVK N+LLD +G +KLADFG M +TG +T VGTP +++
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--MVHCDTAVGTPDYIS 243
Query: 121 PEVL--QPGSGYNSK-ADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
PEVL Q G GY + D WS G+ E+ G PF + I + L +
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA-DSLVGTYSKIMDHKNSLCFPE 302
Query: 178 DKKFSKSFKEMVAMCLVKDQTK--RPTAEKLLKHSFFKH 214
D + SK K ++ L + + R E++ +H FFK+
Sbjct: 303 DAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 341
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 64/262 (24%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 147
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 202
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAP-------------------------------- 152
Q G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 203 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261
Query: 153 --FSKY-----PPMKV--LLMTIQNAPP-----GLDYDRDKKFSKSFKEMVAMCLVKDQT 198
+K+ PPM + LL I N PP G+ FS F++ V CL+K+
Sbjct: 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPA 314
Query: 199 KRPTAEKLLKHSFFKHAKPPEL 220
+R ++L+ H+F K + E+
Sbjct: 315 ERADLKQLMVHAFIKRSDAEEV 336
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 64/262 (24%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 120
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 175
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAP-------------------------------- 152
Q G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 176 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234
Query: 153 --FSKY-----PPMKV--LLMTIQNAPP-----GLDYDRDKKFSKSFKEMVAMCLVKDQT 198
S Y PPM + LL I N PP G+ FS F++ V CL+K+
Sbjct: 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPA 287
Query: 199 KRPTAEKLLKHSFFKHAKPPEL 220
+R ++L+ H+F K + E+
Sbjct: 288 ERADLKQLMVHAFIKRSDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 64/262 (24%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 120
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 175
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAP-------------------------------- 152
Q G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 176 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234
Query: 153 --FSKY-----PPMKV--LLMTIQNAPP-----GLDYDRDKKFSKSFKEMVAMCLVKDQT 198
S Y PPM + LL I N PP G+ FS F++ V CL+K+
Sbjct: 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPA 287
Query: 199 KRPTAEKLLKHSFFKHAKPPEL 220
+R ++L+ H+F K + E+
Sbjct: 288 ERADLKQLMVHAFIKRSDAEEV 309
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 64/262 (24%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 120
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 175
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAP-------------------------------- 152
Q G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 176 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234
Query: 153 --FSKY-----PPMKV--LLMTIQNAPP-----GLDYDRDKKFSKSFKEMVAMCLVKDQT 198
S Y PPM + LL I N PP G+ FS F++ V CL+K+
Sbjct: 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPA 287
Query: 199 KRPTAEKLLKHSFFKHAKPPEL 220
+R ++L+ H+F K + E+
Sbjct: 288 ERADLKQLMVHAFIKRSDAEEV 309
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 64/262 (24%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + +K L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL- 120
Query: 67 RQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
R+ H +HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +M+PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERL 175
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAP-------------------------------- 152
Q G+ Y+ ++DIWS G++ +E+A G P
Sbjct: 176 Q-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234
Query: 153 --FSKY-----PPMKV--LLMTIQNAPP-----GLDYDRDKKFSKSFKEMVAMCLVKDQT 198
S Y PPM + LL I N PP G+ FS F++ V CL+K+
Sbjct: 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGV-------FSLEFQDFVNKCLIKNPA 287
Query: 199 KRPTAEKLLKHSFFKHAKPPEL 220
+R ++L+ H+F K + E+
Sbjct: 288 ERADLKQLMVHAFIKRSDAEEV 309
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETLKA 61
+D P + Y + + ++W+ + + S K G E +G I +KA
Sbjct: 90 VDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 148
Query: 62 LDYLH-RQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L++LH + IHRDVK N+L++ G VK DFG+S + D +++ G + A
Sbjct: 149 LEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD----DVAKDIDAGCKPYXA 204
Query: 121 PEVLQP---GSGYNSKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTIQNAPPGLDYD 176
PE + P GY+ K+DIWS GIT +ELA P+ + P + L ++ P L D
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 264
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
KFS F + + CL K+ +RPT +L +H FF
Sbjct: 265 ---KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 143
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N+FVGT ++
Sbjct: 144 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYV 202
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 203 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 256
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 257 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N+FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSASKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 120
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 121 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 180 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 233
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 234 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 119
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 120 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 178
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 179 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 232
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 233 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 118
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 119 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 178 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 231
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 140
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 141 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANAFVGTAQYV 199
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 200 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 253
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 117
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 118 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 176
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 177 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 230
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 231 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 143
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 144 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 202
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 203 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 256
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 257 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 140
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 141 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 199
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 200 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 253
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 140
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 141 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 199
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 200 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 253
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSAXKS-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 140
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 141 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 199
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 200 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 253
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 139
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N+FVGT ++
Sbjct: 140 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYV 198
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 199 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 252
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 253 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLM--KIAYQDGFEESAIGSILKETLKALD 63
HP++I S+ S +++V M +G + K+A E SI++ L+A+
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLEAVS 214
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH +HRD+K NILLD N ++L+DFG S C + G++ R GTP ++APE+
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRE---LCGTPGYLAPEI 270
Query: 124 L-----QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI----QNAPPGLD 174
L + GY + D+W+ G+ L G PF + +L M + Q + P D
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD 330
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
DR S + K++++ L D R TAE+ L+H FF+
Sbjct: 331 -DR----SSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 142
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 143 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 201
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 202 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPE 255
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 124
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 125 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 183
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 184 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 237
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 238 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 139
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 140 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 198
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 199 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 252
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 253 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y F D L+ + + G L ++ KI F+E+ E +
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 147
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 148 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 206
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD +
Sbjct: 207 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPE 260
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
KF +++V LV D TKR E+ L H FF+
Sbjct: 261 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ + P V++ + +F D L++VM +M G ++LM E E +
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 179
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
ALD +H G IHRDVK N+LLD +G +KLADFG CM + +T VGTP +++
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYIS 237
Query: 121 PEVL--QPGSGYNSK-ADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
PEVL Q G GY + D WS G+ E+ G PF + I N L +
Sbjct: 238 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPD 296
Query: 178 DKKFSKSFKEMVAMCLVKDQTK--RPTAEKLLKHSFFKH 214
D SK K ++ L + + R E++ +H FFK+
Sbjct: 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 117/260 (45%), Gaps = 56/260 (21%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ Y +F D + + M M GS ++K A + E +G + L+ L YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLR 131
Query: 67 RQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
+ I HRDVK NIL+++ G +KL DFGVS + D+ N+FVGT +MAPE LQ
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMAPERLQ 186
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPF-------------------------------- 153
G+ Y+ ++DIWS G++ +ELA G P
Sbjct: 187 -GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 245
Query: 154 -----------SKYPPMKV--LLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKR 200
P M + LL I N PP + F+ F+E V CL+K+ +R
Sbjct: 246 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAER 303
Query: 201 PTAEKLLKHSFFKHAKPPEL 220
+ L H+F K ++ E+
Sbjct: 304 ADLKMLTNHTFIKRSEVEEV 323
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ + P V++ + +F D L++VM +M G ++LM E E +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 184
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
ALD +H G IHRDVK N+LLD +G +KLADFG CM + +T VGTP +++
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 121 PEVL--QPGSGYNSK-ADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
PEVL Q G GY + D WS G+ E+ G PF + I N L +
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPD 301
Query: 178 DKKFSKSFKEMVAMCLVKDQTK--RPTAEKLLKHSFFKH 214
D SK K ++ L + + R E++ +H FFK+
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 340
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F N ++VM G +I + F E I+K+ L
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH+ +HRD+K N+LL++ + ++K+ DFG+SA F+ G + + R +GT ++A
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER---LGTAYYIA 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ Y+ K D+WS G+ L G+ PF ++ L ++ D +
Sbjct: 175 PEVLRK--KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKFSFDPPDWTQ 231
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S K++V + L + +KR +AE+ L H
Sbjct: 232 VSDEAKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ + P V++ + +F D L++VM +M G ++LM E E +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 184
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
ALD +H G IHRDVK N+LLD +G +KLADFG CM + +T VGTP +++
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 121 PEVL--QPGSGYNSK-ADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
PEVL Q G GY + D WS G+ E+ G PF + I N L +
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPD 301
Query: 178 DKKFSKSFKEMVAMCLVKDQTK--RPTAEKLLKHSFFKH 214
D SK K ++ L + + R E++ +H FFK+
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 340
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F N ++VM G +I + F E I+K+ L
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH+ +HRD+K N+LL++ + ++K+ DFG+SA F+ G + + R +GT ++A
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER---LGTAYYIA 191
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ Y+ K D+WS G+ L G+ PF ++ L ++ D +
Sbjct: 192 PEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKFSFDPPDWTQ 248
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S K++V + L + +KR +AE+ L H
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I+ ++ ++ ++V M +G + + E I++ L+ + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H+ +HRD+K NILLD + +KL DFG S C D G++ RS GTP ++APE+++
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRS---VCGTPSYLAPEIIE 196
Query: 126 PGS-----GYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI----QNAPPGLDYD 176
GY + D+WS G+ L G PF M +L M + Q P D
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD-- 254
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+S + K++V+ LV KR TAE+ L H FF+
Sbjct: 255 ---DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
MS +DHP ++ Y +F D L+ + + G L ++ KI F+E+ E +
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIV 145
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
AL+YLH +G IHRD+K NILL+ + +++ DFG +A + +Q N FVGT ++
Sbjct: 146 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYV 204
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
+PE+L S S +D+W+ G +L G PF + I+ L+YD
Sbjct: 205 SPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPA 258
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEK------LLKHSFFK 213
F +++V LV D TKR E+ L H FF+
Sbjct: 259 AFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I+ ++ ++ ++V M +G + + E I++ L+ + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 127
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H+ +HRD+K NILLD + +KL DFG S C D G++ R GTP ++APE+++
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE---VCGTPSYLAPEIIE 183
Query: 126 PGS-----GYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI----QNAPPGLDYD 176
GY + D+WS G+ L G PF M +L M + Q P D
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD-- 241
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+S + K++V+ LV KR TAE+ L H FF+
Sbjct: 242 ---DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I+ ++ ++ ++V M +G + + E I++ L+ + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H+ +HRD+K NILLD + +KL DFG S C D G++ R GTP ++APE+++
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE---VCGTPSYLAPEIIE 196
Query: 126 PGS-----GYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI----QNAPPGLDYD 176
GY + D+WS G+ L G PF M +L M + Q P D
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD-- 254
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+S + K++V+ LV KR TAE+ L H FF+
Sbjct: 255 ---DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +++ + +F + L++++ F+ G +++ + F E + L E ALD
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALALD 140
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH G I+RD+K NILLD G +KL DFG+S ++ D ++ +F GT +MAPEV
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G+ AD WSFG+ E+ G PF
Sbjct: 198 VNR-RGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +++ + +F + L++++ F+ G +++ + F E + L E ALD
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALALD 140
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH G I+RD+K NILLD G +KL DFG+S ++ D ++ +F GT +MAPEV
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G+ AD WSFG+ E+ G PF
Sbjct: 198 VNR-RGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP + +C+F NL+ VM ++ G ++ ++ ++ F+ S E + L +
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQF 134
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G ++RD+K NILLD +G +K+ADFG+ GD + N F GTP ++APE+L
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM-LGDAK--TNEFCGTPDYIAPEIL 191
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
G YN D WSFG+ E+ G +PF
Sbjct: 192 L-GQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP + +C+F NL+ VM ++ G ++ ++ ++ F+ S E + L +
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQF 133
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G ++RD+K NILLD +G +K+ADFG+ GD + N F GTP ++APE+L
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM-LGDAK--TNXFCGTPDYIAPEIL 190
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
G YN D WSFG+ E+ G +PF
Sbjct: 191 L-GQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETLKA 61
++HPNVI+ Y SF+ D+ L +V+ G ++K + E + + A
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
L+++H + +HRD+K N+ + GVVKL D G+ + + ++ VGTP +M+P
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSP 205
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD--RDK 179
E + +GYN K+DIWS G E+A +PF K+ L ++ DY
Sbjct: 206 ERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQCDYPPLPSD 261
Query: 180 KFSKSFKEMVAMCLVKDQTKRP 201
+S+ +++V MC+ D KRP
Sbjct: 262 HYSEELRQLVNMCINPDPEKRP 283
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +++ + +F + L++++ F+ G +++ + F E + L E ALD
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALALD 141
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH G I+RD+K NILLD G +KL DFG+S ++ D ++ +F GT +MAPEV
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 198
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G+ AD WSFG+ E+ G PF
Sbjct: 199 VNR-RGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 127/236 (53%), Gaps = 19/236 (8%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P ++ + +F ++ L +++ ++ G ++ ++ F E + + E + AL++LH
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELF--THLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 67 RQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQP 126
+ G I+RD+K NILLD+NG V L DFG+S F + +R+ + F GT +MAP++++
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYD-FCGTIEYMAPDIVRG 234
Query: 127 G-SGYNSKADIWSFGITALELAHGHAPFS----KYPPMKVLLMTIQNAPPGLDYDRDKKF 181
G SG++ D WS G+ EL G +PF+ K ++ +++ PP ++
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-----YPQEM 289
Query: 182 SKSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
S K+++ L+KD KR A+++ +H FF+ +L+ KK+ A P+
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPV 345
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP V++ + +F + L++++ F+ G +++ + F E + L E LD
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH G I+RD+K NILLD G +KL DFG+S + D ++ +F GT +MAPEV
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEV 201
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G++ AD WS+G+ E+ G PF
Sbjct: 202 VNR-QGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAY---QDGFEESAIGSILKETLK 60
+ H N+++ SF + + + M + GS L++ + +D E IG K+ L+
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILE 133
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT-NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
L YLH +HRD+K N+L++T +GV+K++DFG S + TF GT +M
Sbjct: 134 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI---NPCTETFTGTLQYM 190
Query: 120 APEVLQPG-SGYNSKADIWSFGITALELAHGHAPFSKYPP-----MKVLLMTIQNAPPGL 173
APE++ G GY ADIWS G T +E+A G PF + KV + + P
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP-- 248
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ S K + C D KR A LL F K
Sbjct: 249 -----ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRD 74
+F D+NL++VM + G L L+ ++D E L E + A+D +H+ ++HRD
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLS-KFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD 200
Query: 75 VKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSG----Y 130
+K NIL+D NG ++LADFG + + G Q S VGTP +++PE+LQ G Y
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS--VAVGTPDYISPEILQAMEGGKGRY 258
Query: 131 NSKADIWSFGITALELAHGHAPF 153
+ D WS G+ E+ +G PF
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPF 281
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSC-LHLMKIAYQDGFEESAIGSILKETL 59
M ++HP ++ + SF + ++++V+ + G HL + + F+E + + E +
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELV 125
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
ALDYL Q IHRD+K NILLD +G V + DF ++A + R+ T GT +M
Sbjct: 126 MALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMAGTKPYM 181
Query: 120 APEVL--QPGSGYNSKADIWSFGITALELAHGHAPF 153
APE+ + G+GY+ D WS G+TA EL G P+
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAY---QDGFEESAIGSILKETLK 60
+ H N+++ SF + + + M + GS L++ + +D E IG K+ L+
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILE 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT-NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
L YLH +HRD+K N+L++T +GV+K++DFG S + TF GT +M
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL---AGINPCTETFTGTLQYM 176
Query: 120 APEVLQPG-SGYNSKADIWSFGITALELAHGHAPFSKYPP-----MKVLLMTIQNAPPGL 173
APE++ G GY ADIWS G T +E+A G PF + KV + + P
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP-- 234
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ S K + C D KR A LL F K
Sbjct: 235 -----ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+S++ HP +IR + +F ++++M ++ G L++ + + F E
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCL 117
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL+YLH + I+RD+K NILLD NG +K+ DFG + + D GTP ++A
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------TYXLCGTPDYIA 171
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNA----PPGLDYD 176
PEV+ YN D WSFGI E+ G+ PF MK I NA PP
Sbjct: 172 PEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNAELRFPPF---- 225
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHA 215
F++ K++++ + +D ++R E + H +FK
Sbjct: 226 ----FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DHPN+IR Y +F ++++++VM G ++ ++ F ES I+K+ L
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLS 134
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
A+ Y H+ HRD+K N L T + +KL DFG++A F G R++ VGTP
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTK---VGTPY 190
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
+++P+VL+ Y + D WS G+ L G+ PFS P +++ I+
Sbjct: 191 YVSPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSA-PTDXEVMLKIREGTFTFPEKD 247
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
S + ++ L K +R T+ + L+H +F+
Sbjct: 248 WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DHPN+IR Y +F ++++++VM G ++ ++ F ES I+K+ L
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLS 117
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
A+ Y H+ HRD+K N L T + +KL DFG++A F G R++ VGTP
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTK---VGTPY 173
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
+++P+VL+ Y + D WS G+ L G+ PFS P +++ I+
Sbjct: 174 YVSPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSA-PTDXEVMLKIREGTFTFPEKD 230
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
S + ++ L K +R T+ + L+H +F+
Sbjct: 231 WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 22/220 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I + ++VV M G L KI Q F E ++L K ++YL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLD--KILRQKFFSEREASAVLFTITKTVEYL 132
Query: 66 HRQGHIHRDVKAGNIL-LDTNG---VVKLADFGVSACMFDTGDRQRSRNTFVGTPCW--- 118
H QG +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLMTPCYTAN 185
Query: 119 -MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTIQNAPPGLD 174
+APEVL+ GY++ DIWS G+ + G+ PF+ P P ++ L I + L
Sbjct: 186 FVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI-LARIGSGKFSLS 243
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
S + K++V+ L D +R TA +L+H + H
Sbjct: 244 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETLKA 61
+ HPN+++ SF + +L++VM + G +I Q G F+E I + A
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFK--RINAQKGVLFQEDQILDWFVQICLA 137
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
L ++H + +HRD+K+ NI L +G V+L DFG++ + T + R+ +GTP +++P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA---CIGTPYYLSP 194
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNA---PPGLDYDRD 178
E+ + YN+K+DIW+ G EL F MK L++ I + P L Y D
Sbjct: 195 EICE-NKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPPVSLHYSYD 252
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+ +V+ ++ RP+ +L+ F
Sbjct: 253 ------LRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRD 74
+F +++L++VM + G L L+ ++D E + E + A+D +H+ ++HRD
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLS-KFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRD 216
Query: 75 VKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQP---GSG-Y 130
+K N+LLD NG ++LADFG M D G Q S VGTP +++PE+LQ G G Y
Sbjct: 217 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS--VAVGTPDYISPEILQAMEDGMGKY 274
Query: 131 NSKADIWSFGITALELAHGHAPF 153
+ D WS G+ E+ +G PF
Sbjct: 275 GPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRD 74
+F +++L++VM + G L L+ ++D E + E + A+D +H+ ++HRD
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLS-KFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRD 200
Query: 75 VKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQP---GSG-Y 130
+K N+LLD NG ++LADFG M D G Q S VGTP +++PE+LQ G G Y
Sbjct: 201 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS--VAVGTPDYISPEILQAMEDGMGKY 258
Query: 131 NSKADIWSFGITALELAHGHAPF 153
+ D WS G+ E+ +G PF
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP + + +C F L+ VM F+ G + I F+E+ E + AL +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLM--FHIQKSRRFDEARARFYAAEIISALMF 139
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G I+RD+K N+LLD G KLADFG+ G + TF GTP ++APE+L
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYIAPEIL 196
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
Q Y D W+ G+ E+ GHAPF
Sbjct: 197 QE-MLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ + S+ ++V G +I + F E I+K+ +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFD--EIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K NILL++ + +K+ DFG+S C F + + R +GT ++A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIA 191
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ Y+ K D+WS G+ L G PF + L ++ D + +
Sbjct: 192 PEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRT 248
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH--AKPPELSVKKLFADLPPL 232
S K+++ L + R TA + L+H + + ++ P +S DLP L
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS------DLPSL 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I + ++++V M G L KI Q F E +L K ++YL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLD--KILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 66 HRQGHIHRDVKAGNIL-LDTNG---VVKLADFGVSACMFDTGDRQRSRNTFVGTPCW--- 118
H QG +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCYTAN 190
Query: 119 -MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTIQNAPPGLD 174
+APEVL+ GY+ DIWS GI + G+ PF+ P P ++ L I + L
Sbjct: 191 FVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKFTLS 248
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S++ K++V+ L D +R TA+++L+H
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I + ++++V M G L KI Q F E +L K ++YL
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLD--KILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 66 HRQGHIHRDVKAGNIL-LDTNG---VVKLADFGVSACMFDTGDRQRSRNTFVGTPCW--- 118
H QG +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCYTAN 190
Query: 119 -MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTIQNAPPGLD 174
+APEVL+ GY+ DIWS GI + G+ PF+ P P ++ L I + L
Sbjct: 191 FVAPEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKFTLS 248
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S++ K++V+ L D +R TA+++L+H
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 12/232 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HP ++ +F L++++ +++ G M++ + F E L E AL
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQLEREGIFMEDTACFYLAEISMALG 135
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH++G I+RD+K NI+L+ G VKL DFG+ G +TF GT +MAPE+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHTFCGTIEYMAPEI 192
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTIQNAPPGLDYDRDKK 180
L SG+N D WS G ++ G PF+ + + +L N PP L +
Sbjct: 193 LMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K K A L A ++ H FF+H EL +K+ PL
Sbjct: 252 LKKLLKRNAASRL---GAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+D+P+V+ + F D ++VV+ S L L K + E +++T++ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK--RRKAVTEPEARYFMRQTIQGVQ 156
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRD+K GN+ L+ + VK+ DFG++ + G+R++ T GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---TLCGTPNYIAPEV 213
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + DIWS G L G PF + + +N +Y + +
Sbjct: 214 LC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RP+ +LL FF P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP ++ + F +S L+ V+ ++ G + M+ Q E E AL+Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNY 168
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G I+RD+K N+LLD+ G +KL D+G+ GD + +TF GTP ++APE+L
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEIL 225
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G Y D W+ G+ E+ G +PF
Sbjct: 226 R-GEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I + ++VV G L KI Q F E ++L K ++YL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLD--KILRQKFFSEREASAVLFTITKTVEYL 132
Query: 66 HRQGHIHRDVKAGNIL-LDTNG---VVKLADFGVSACMFDTGDRQRSRNTFVGTPCW--- 118
H QG +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLXTPCYTAN 185
Query: 119 -MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTIQNAPPGLD 174
+APEVL+ GY++ DIWS G+ G+ PF+ P P ++ L I + L
Sbjct: 186 FVAPEVLER-QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEI-LARIGSGKFSLS 243
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
S + K++V+ L D +R TA +L+H + H
Sbjct: 244 GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVH 283
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ A + FE + I ++T + +DYL
Sbjct: 67 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEV- 123
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 182
Query: 124 -LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
+Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K K ++A CL K + +RP+ ++L
Sbjct: 243 PKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + ++ NL +V + EGS L+ + F+ + I ++T + +DYL
Sbjct: 91 HVNIL-LFMGYMTKDNLAIVTQW-CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEV- 123
H + IHRD+K+ NI L VK+ DFG++ +G +Q + T G+ WMAPEV
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLWMAPEVI 206
Query: 124 -LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR-DKKF 181
+Q + ++ ++D++S+GI EL G P+S ++ + D + K
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266
Query: 182 SKSFKEMVAMCLVKDQTKRP------TAEKLLKHSF 211
K+ K +VA C+ K + +RP ++ +LL+HS
Sbjct: 267 PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L+++M + + G + +A+ E+ A S ++ +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEA-RSKFRQIVS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G + +TF G+P + A
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL---DTFCGSPPYAA 178
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 179 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 12/232 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HP ++ +F L++++ +++ G M++ + F E L E AL
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQLEREGIFMEDTACFYLAEISMALG 135
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+LH++G I+RD+K NI+L+ G VKL DFG+ G + F GT +MAPE+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHXFCGTIEYMAPEI 192
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTIQNAPPGLDYDRDKK 180
L SG+N D WS G ++ G PF+ + + +L N PP L +
Sbjct: 193 LMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K K A L A ++ H FF+H EL +K+ PL
Sbjct: 252 LKKLLKRNAASRL---GAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETLKA 61
+DHPN+I+ + F N+++VM G L + A G E + ++K+ + A
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 62 LDYLHRQGHIHRDVKAGNILL-DT--NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
L Y H Q +H+D+K NIL DT + +K+ DFG+ A +F + + S N GT +
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL-AELFKSD--EHSTNA-AGTALY 192
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
MAPEV + + K DIWS G+ L G PF+ +V P +Y +
Sbjct: 193 MAPEVFKRDVTF--KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP---NYAVE 247
Query: 179 -KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHA 215
+ + +++ L KD +RP+A ++L H +FK A
Sbjct: 248 CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ +TF G+P + A
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGNKL---DTFCGSPPYAA 181
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 182 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ A + FE + I ++T + +DYL
Sbjct: 79 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPE 122
H + IHRD+K+ NI L + VK+ DFG++ R + F G+ WMAPE
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPE 192
Query: 123 V--LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK- 179
V +Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
K K ++A CL K + +RP+ ++L
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+D+P+V+ + F D ++VV+ S L L K + E +++T++ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK--RRKAVTEPEARYFMRQTIQGVQ 156
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEV 213
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + DIWS G L G PF + + +N +Y + +
Sbjct: 214 LC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RP+ +LL FF P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+D+P+V+ + F D ++VV+ S L L K + E +++T++ +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK--RRKAVTEPEARYFMRQTIQGVQ 156
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX---LCGTPNYIAPEV 213
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + DIWS G L G PF + + +N +Y + +
Sbjct: 214 LC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 267
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RP+ +LL FF P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM +M G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +K+ADFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ +TF G+P + A
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAA 180
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 181 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ +TF G+P + A
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAA 180
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 181 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM +M G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +K+ADFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP ++ + F +S L+ V+ ++ G + M+ Q E E AL+Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNY 136
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G I+RD+K N+LLD+ G +KL D+G+ GD + + F GTP ++APE+L
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEIL 193
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G Y D W+ G+ E+ G +PF
Sbjct: 194 R-GEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+D+P+V+ + F D ++VV+ S L L K + E +++T++ +
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK--RRKAVTEPEARYFMRQTIQGVQ 140
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEV
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEV 197
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + DIWS G L G PF + + +N +Y + +
Sbjct: 198 LC-KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHINP 251
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RP+ +LL FF P
Sbjct: 252 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 286
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ +TF G+P + A
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAA 180
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 181 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 71 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T T GTP ++A
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 183
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 289
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F ++V G +I + F E I+++ L +
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGIT 164
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K N+LL++ + +++ DFG+S F+ + + + +GT ++A
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDK---IGTAYYIA 220
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ K D+WS G+ L G PF+ + L ++ + + KK
Sbjct: 221 PEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKK 277
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRV 236
S+S K+++ L + R +A L H + + ++SV D+P L N +
Sbjct: 278 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV-----DVPSLDNAI 328
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 72 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T T GTP ++A
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 184
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 290
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 72 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T T GTP ++A
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 184
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 290
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 72 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T T GTP ++A
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 184
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 290
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F ++V G +I + F E I+++ L +
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGIT 163
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K N+LL++ + +++ DFG+S F+ + + + +GT ++A
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDK---IGTAYYIA 219
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ K D+WS G+ L G PF+ + L ++ + + KK
Sbjct: 220 PEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKK 276
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRV 236
S+S K+++ L + R +A L H + + ++SV D+P L N +
Sbjct: 277 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV-----DVPSLDNAI 327
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 78 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T T GTP ++A
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 190
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 251 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 296
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +V+ + F + ++VV+ S L L K + E L++ +
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQ 131
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLHR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ T GTP ++APEV
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEV 188
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 189 LS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINP 242
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RPT +LL FF P
Sbjct: 243 VAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +V+ + F + ++VV+ S L L K + E L++ +
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQ 135
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLHR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ T GTP ++APEV
Sbjct: 136 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEV 192
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
L G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 193 LS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINP 246
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ L D T RPT +LL FF
Sbjct: 247 VAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ A + FE + I ++T + +DYL
Sbjct: 79 HVNIL-LFMGYSTAPQLAIVTQW-CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPE 122
H + IHRD+K+ NI L + VK+ DFG++ R + F G+ WMAPE
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPE 192
Query: 123 V--LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK- 179
V +Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
K K ++A CL K + +RP+ ++L
Sbjct: 253 NCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F ++V G +I + F E I+++ L +
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGIT 140
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K N+LL++ + +++ DFG+S F+ + + + +GT ++A
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDK---IGTAYYIA 196
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ K D+WS G+ L G PF+ + L ++ + + KK
Sbjct: 197 PEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKK 253
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRV 236
S+S K+++ L + R +A L H + + ++SV D+P L N +
Sbjct: 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV-----DVPSLDNAI 304
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP ++ + F +S L+ V+ ++ G + M+ Q E E AL+Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNY 121
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G I+RD+K N+LLD+ G +KL D+G+ GD + + F GTP ++APE+L
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEIL 178
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G Y D W+ G+ E+ G +PF
Sbjct: 179 R-GEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H +V+ + F + ++VV+ S L L K + E L++ + YL
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYL 133
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
HR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ T GTP ++APEVL
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTPNYIAPEVLS 190
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 191 -KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 244
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RPT +LL FF P
Sbjct: 245 ASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGS--CLHLMKIAYQDGF--EESAIGSILKET 58
++ HP+++ ++ D L++V FM +G+ C ++K A GF E+ +++
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFM-DGADLCFEIVKRA-DAGFVYSEAVASHYMRQI 139
Query: 59 LKALDYLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
L+AL Y H IHRDVK N+LL + + VKL DFGV+ + ++G R VGT
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---VGT 196
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
P +MAPEV++ Y D+W G+ L G PF Y + L I ++
Sbjct: 197 PHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNP 253
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ S+S K++V L+ D +R T + L H + K
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L HP++I+ Y ++ ++VM +++ G I EE + ++ L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY--ICKHGRVEEMEARRLFQQILS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+DY HR +HRD+K N+LLD + K+ADFG+S M D G+ R T G+P + A
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLR---TSCGSPNYAA 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEV+ + DIWS G+ L G PF ++ P T+ G + +
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGVFYIPE 232
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
++S ++ L D KR T + + +H +FK P L
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
+HP ++ + F +S L+ V+ ++ G + M+ Q E E AL+Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNY 125
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
LH +G I+RD+K N+LLD+ G +KL D+G+ GD + + F GTP ++APE+L
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEIL 182
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPF 153
+ G Y D W+ G+ E+ G +PF
Sbjct: 183 R-GEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ + S+ ++V G +I + F E I+K+ +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFD--EIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K NILL++ + +K+ DFG+S C F + + R +GT ++A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIA 191
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ Y+ K D+WS G+ L G PF + L ++ D + +
Sbjct: 192 PEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRT 248
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S K+++ L + R TA + L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 31/221 (14%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---RFDEQRTATYITELAN 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL +NG +K+ADFG S + R+T GT ++
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRDTLCGTLDYLP 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PE+++ G ++ K D+WS G+ E G PF + T Q Y R +
Sbjct: 179 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISR 224
Query: 181 FSKSF--------KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+F +++++ L + ++R T ++L+H + K
Sbjct: 225 VEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ + S+ ++V G +I + F E I+K+ +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFD--EIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K NILL++ + +K+ DFG+S C F + + R +GT ++A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIA 191
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL+ Y+ K D+WS G+ L G PF + L ++ D + +
Sbjct: 192 PEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRT 248
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S K+++ L + R TA + L+H
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 211 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T + T GTP ++A
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPTYLA 323
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 384 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 429
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 17/231 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HP +I+ +F + ++V+ M G K+ +E+ + L A+
Sbjct: 197 LNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G IHRD+K N+LL + + ++K+ DFG S + +T + T GTP ++A
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR----TLCGTPTYLA 309
Query: 121 PEVLQP--GSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PEVL +GYN D WS G+ G+ PFS++ L I + +
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADL 229
+ S+ ++V LV D R T E+ L+H + + +K+ F DL
Sbjct: 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE-----DMKRKFQDL 415
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 31/221 (14%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---RFDEQRTATYITELAN 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL +NG +K+ADFG S + R T GT ++
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PE+++ G ++ K D+WS G+ E G PF + T Q Y R +
Sbjct: 179 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISR 224
Query: 181 FSKSF--------KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+F +++++ L + ++R T ++L+H + K
Sbjct: 225 VEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +E + ++ +
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIVS 117
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ +TF G+P + A
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAA 173
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 174 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 4 IDHPNVIRAYCSFV--VDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETL 59
+ HPN++R Y + ++ L++VM + G ++ ++ +E + ++ +
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 60 KALDYLHRQ---GH--IHRDVKAGNILLDTNGVVKLADFGVSACM-FDTGDRQRSRNTFV 113
AL HR+ GH +HRD+K N+ LD VKL DFG++ + DT + TFV
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----TFV 177
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGL 173
GTP +M+PE + S YN K+DIWS G EL PF+ + ++ + +
Sbjct: 178 GTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI 236
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
Y ++S E++ L RP+ E++L++
Sbjct: 237 PY----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +K+ADFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLAGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 145
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 200
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 201 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 254
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 255 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L+++M + + G + +A+ E+ A S ++ +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEA-RSKFRQIVS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G + + F G P + A
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL---DAFCGAPPYAA 181
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 182 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLXGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 172
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+YLH I+RD+K N+L+D G +++ DFG + + + + T GTP ++
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGATWTLCGTPEYL 226
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 227 APEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH---- 281
Query: 180 KFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 282 -FSSDLKDLLRNLLQVDLTKR 301
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H +V+ + F + ++VV+ S L L K + E L++ + YL
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYL 155
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
HR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEVL
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTPNYIAPEVLS 212
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 213 -KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 266
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ L D T RPT +LL FF
Sbjct: 267 ASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L HP++I+ Y ++ ++VM +++ G I EE + ++ L
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY--ICKHGRVEEMEARRLFQQILS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+DY HR +HRD+K N+LLD + K+ADFG+S M D G+ R G+P + A
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRDS---CGSPNYAA 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEV+ + DIWS G+ L G PF ++ P T+ G + +
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGVFYIPE 232
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
++S ++ L D KR T + + +H +FK P L
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYL 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H +V+ + F + ++VV+ S L L K + E L++ + YL
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYL 157
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
HR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEVL
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTPNYIAPEVLS 214
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 215 -KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 268
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ L D T RPT +LL FF
Sbjct: 269 ASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIV 146
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 199
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 200 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 255
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 256 --FSSDLKDLLRNLLQVDLTKR 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 136
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 191
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 192 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 245
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 246 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ + F G+P + A
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DEFCGSPPYAA 180
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 181 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN+I+ F + + +V+ + G +I + + E +K+ L+A+
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFD--RIVEKGYYSERDAADAVKQILEAVA 162
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L T + +K+ADFG+S + + Q T GTP + A
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCA 218
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PE+L+ G Y + D+WS GI L G PF + + I N +
Sbjct: 219 PEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDE 277
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S + K++V +V D KR T + L+H
Sbjct: 278 VSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+ + Y F ++V G +I + F E I+++ L +
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGIT 140
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y H+ +HRD+K N+LL++ + +++ DFG+S F+ + + + +GT ++A
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKXKDK---IGTAYYIA 196
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ K D+WS G+ L G PF+ + L ++ + + KK
Sbjct: 197 PEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKK 253
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRV 236
S+S K+++ L + R +A L H + + ++SV D+P L N +
Sbjct: 254 VSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISV-----DVPSLDNAI 304
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 4 IDHPNVIRAYCSFV--VDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETL 59
+ HPN++R Y + ++ L++VM + G ++ ++ +E + ++ +
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 60 KALDYLHRQ---GH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
AL HR+ GH +HRD+K N+ LD VKL DFG++ + D + FVG
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE---FVG 178
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLD 174
TP +M+PE + S YN K+DIWS G EL PF+ + ++ + +
Sbjct: 179 TPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
Y ++S E++ L RP+ E++L++
Sbjct: 238 Y----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFAEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R T GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIV 172
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 225
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 281
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 282 --FSSDLKDLLRNLLQVDLTKR 301
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +++HPN+++ + + L++VM + + G + +A+ E+ A ++ +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAK-FRQIVS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ + F G P + A
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DAFCGAPPYAA 180
Query: 121 PEVLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
PE+ Q G Y+ + D+WS G+ L G PF
Sbjct: 181 PELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLM-KIAYQDGFEESAIGSILKETL 59
M + HPN++ + NL +V +++ GS L+ K ++ +E S+ +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 60 KALDYLHRQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
K ++YLH + +HR++K+ N+L+D VK+ DFG+S T S + GTP
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---LSSKSAAGTPE 204
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
WMAPEVL+ N K+D++SFG+ ELA P+ P +V+ A G R
Sbjct: 205 WMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKR 257
Query: 178 ---DKKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKPP 218
+ + ++ C + KRP+ + L K A PP
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 138
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 191
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 192 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 247
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 248 --FSSDLKDLLRNLLQVDLTKR 267
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKV 161
+APE++ GYN D W+ G+ E+A G+ PF P+++
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G L K++ F+E + + E
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS---KFDEQRTATYITELAN 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 180 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 234 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 137
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R T GTP +
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEY 190
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 191 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 246
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 247 --FSSDLKDLLRNLLQVDLTKR 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEII-ISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 90 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 147
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL 124
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV+
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 205
Query: 125 --QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 265
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 266 PKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H +V+ + F + ++VV+ S L L K + E L++ + YL
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
HR IHRD+K GN+ L+ + VK+ DFG++ + G+R++ GTP ++APEVL
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTPNYIAPEVLS 188
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
G++ + D+WS G L G PF + L +N +Y K +
Sbjct: 189 -KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYSIPKHINPVA 242
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
++ L D T RPT +LL FF P
Sbjct: 243 ASLIQKMLQTDPTARPTINELLNDEFFTSGYIP 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL 124
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV+
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 206
Query: 125 --QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R+T GT ++
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDTLCGTLDYLP 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 176 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 229
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 230 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ ++A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S C + R T GT ++
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSS----RRTTLSGTLDYLP 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 176 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 229
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 230 --VTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L HP++I+ Y S++++VM +++ G I +E + ++ L
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDY--ICKNGRLDEKESRRLFQQILS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+DY HR +HRD+K N+LLD + K+ADFG+S M D G+ R G+P + A
Sbjct: 128 GVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRXS---CGSPNYAA 183
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+ + DIWS G+ L G PF + L I + G+ Y +
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICD---GIFYT-PQY 238
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
+ S ++ L D KR T + + +H +FK P L
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYL 278
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 145
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R+ GT ++
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTLDYLP 200
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 201 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 254
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 255 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 180 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 234 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE ++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 180 PEXIE-GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 234 --VTEGARDLISRLLKHNPSQRPXLREVLEH 262
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I H N++ + ++L++VM ++ G +I + + E +++++ L A+
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFD--RIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 64 YLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLHR G +HRD+K N+L D + ++DFG+S M GD +T GTP ++A
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVM---STACGTPGYVA 190
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ A L G+ PF K L I A D
Sbjct: 191 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK-LFEQILKAEYEFDSPYWDD 248
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S S K+ + + KD KR T E+ +H
Sbjct: 249 ISDSAKDFIRNLMEKDPNKRYTCEQAARH 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 65 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL 124
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV+
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 180
Query: 125 --QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 241 PKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL 124
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 183
Query: 125 --QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL 124
H + IHRD+K+ NI L + VK+ DFG++ +G Q + G+ WMAPEV+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVI 183
Query: 125 --QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KF 181
Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 4 IDHPNVIRAYCSFV--VDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKETL 59
+ HPN++R Y + ++ L++VM + G ++ ++ +E + ++ +
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 60 KALDYLHRQ---GH--IHRDVKAGNILLDTNGVVKLADFGVSACM-FDTGDRQRSRNTFV 113
AL HR+ GH +HRD+K N+ LD VKL DFG++ + DT + FV
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----AFV 177
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGL 173
GTP +M+PE + S YN K+DIWS G EL PF+ + ++ + +
Sbjct: 178 GTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI 236
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
Y ++S E++ L RP+ E++L++
Sbjct: 237 PY----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKAL 62
++ P +++ SF +SNL++V+ + G HL +I F E + +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLTF 155
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCWMAP 121
+YLH I+RD+K N+L+D G +K+ADFG + R + R GTP ++AP
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAP 208
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ GYN D W+ G+ E+A G+ PF P+++ + + F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-----F 262
Query: 182 SKSFKEMVAMCLVKDQTKR 200
S K+++ L D TKR
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPE 122
H + IHRD+K+ NI L + VK+ DFG++ R + F G+ WMAPE
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPE 204
Query: 123 V--LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK- 179
V +Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 265 NCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 83 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 140
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPE 122
H + IHRD+K+ NI L + VK+ DFG++ R + F G+ WMAPE
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPE 196
Query: 123 V--LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK- 179
V +Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 256
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 257 NCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLM-KIAYQDGFEESAIGSILKETL 59
M + HPN++ + NL +V +++ GS L+ K ++ +E S+ +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 60 KALDYLHRQGH--IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
K ++YLH + +HRD+K+ N+L+D VK+ DFG+S GTP
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPE 204
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
WMAPEVL+ N K+D++SFG+ ELA P+ P +V+ A G R
Sbjct: 205 WMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKR 257
Query: 178 ---DKKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKPP 218
+ + ++ C + KRP+ + L K A PP
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 30 AEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVK 89
EGS L+ + FE + I ++T + +DYLH + IHRD+K+ NI L + VK
Sbjct: 85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
Query: 90 LADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL--QPGSGYNSKADIWSFGITALEL 146
+ DFG++ +G Q + G+ WMAPEV+ Q + Y+ ++D+++FGI EL
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 147 AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KFSKSFKEMVAMCLVKDQTKRPTAEK 205
G P+S ++ + D + + K+ K ++A CL K + +RP +
Sbjct: 203 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 262
Query: 206 LL 207
+L
Sbjct: 263 IL 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN++ + +L+++M ++ G +I + + E ++ + L A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFD--RIVEKGFYTERDASRLIFQVLDAVK 130
Query: 64 YLHRQGHIHRDVKAGNIL---LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L LD + + ++DFG+S M D G +T GTP ++A
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ A L G+ PF K L I A D
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYWDD 244
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
S S K+ + + KD KR T E+ L+H +
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 30 AEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVK 89
EGS L+ + FE + I ++T + +DYLH + IHRD+K+ NI L + VK
Sbjct: 85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
Query: 90 LADFGVSACMFD-TGDRQRSRNTFVGTPCWMAPEVL--QPGSGYNSKADIWSFGITALEL 146
+ DFG++ +G Q + + G+ WMAPEV+ Q + Y+ ++D+++FGI EL
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 147 AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK-KFSKSFKEMVAMCLVKDQTKRPTAEK 205
G P+S ++ + D + + K+ K ++A CL K + +RP +
Sbjct: 203 MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ 262
Query: 206 LL 207
+L
Sbjct: 263 IL 264
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEA 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN++ + +L+++M ++ G +I + + E ++ + L A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFD--RIVEKGFYTERDASRLIFQVLDAVK 130
Query: 64 YLHRQGHIHRDVKAGNIL---LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L LD + + ++DFG+S M D G +T GTP ++A
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ A L G+ PF K L I A D
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYWDD 244
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
S S K+ + + KD KR T E+ L+H +
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 179 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 233 --VTEGARDLISRLLKHNPSQRPMLREVLEH 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN++ + +L+++M ++ G +I + + E ++ + L A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFD--RIVEKGFYTERDASRLIFQVLDAVK 130
Query: 64 YLHRQGHIHRDVKAGNIL---LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L LD + + ++DFG+S M D G +T GTP ++A
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ A L G+ PF K L I A D
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYWDD 244
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S S K+ + + KD KR T E+ L+H
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIV 144
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 197
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 253
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 254 --FSSDLKDLLRNLLQVDLTKR 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++A G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+AP ++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG++ R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN++ + +L+++M ++ G +I + + E ++ + L A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFD--RIVEKGFYTERDASRLIFQVLDAVK 130
Query: 64 YLHRQGHIHRDVKAGNIL---LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L LD + + ++DFG+S M D G +T GTP ++A
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ A L G+ PF K L I A D
Sbjct: 187 PEVLAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYWDD 244
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S S K+ + + KD KR T E+ L+H
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 144
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 197
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 253
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 254 --FSSDLKDLLRNLLQVDLTKR 273
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 118
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 173
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 174 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 227
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 228 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM ++ G HL +I F E + +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIV 172
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+L+D G +++ DFG + R + R GTP +
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 225
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ +
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-----VRFP 279
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 280 SHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D P ++ +F L ++ M G LH ++ F E+ + E + L++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGD-LH-YHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
+H + ++RD+K NILLD +G V+++D G+ AC F ++ + VGT +MAPEVL
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVL 362
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
Q G Y+S AD +S G +L GH+PF ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D P ++ +F L ++ M G LH ++ F E+ + E + L++
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGD-LH-YHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
+H + ++RD+K NILLD +G V+++D G+ AC F ++ + VGT +MAPEVL
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVL 361
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
Q G Y+S AD +S G +L GH+PF ++
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 393
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H N++ + + L +V + EGS L+ + FE + I ++T + +DYL
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQW-CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPE 122
H + IHRD+K+ NI L + VK+ DFG++ R + F G+ WMAPE
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPE 176
Query: 123 VL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK- 179
V+ Q + Y+ ++D+++FGI EL G P+S ++ + D + +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
K+ K ++A CL K + +RP ++L
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 116
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R T GT ++
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLP 171
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 172 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 225
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 226 --VTEGARDLISRLLKHNPSQRPMLREVLEH 254
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D P ++ +F L ++ M G LH ++ F E+ + E + L++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGD-LH-YHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
+H + ++RD+K NILLD +G V+++D G+ AC F ++ + VGT +MAPEVL
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVL 362
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
Q G Y+S AD +S G +L GH+PF ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D P ++ +F L ++ M G LH ++ F E+ + E + L++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGD-LH-YHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
+H + ++RD+K NILLD +G V+++D G+ AC F ++ + VGT +MAPEVL
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVGTHGYMAPEVL 362
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
Q G Y+S AD +S G +L GH+PF ++
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 121
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+A+FG S + R T GT ++
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGTLDYLP 176
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 177 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 230
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 231 --VTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V+ +M++GS L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G L K++ F+E + + E
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS---KFDEQRTATYITELAN 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLXGTLDYLP 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 180 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 234 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H ++ + Y + +++V+ + G I QD E + ++ + A+ Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDY--IISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H QG+ HRD+K N+L D +KL DFG+ C G++ T G+ + APE++Q
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL--CAKPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSF 185
S S+AD+WS GI L G PF M + ++ YD K S S
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK-----YDVPKWLSPSS 237
Query: 186 KEMVAMCLVKDQTKRPTAEKLLKHSFF--KHAKPPELSVKKLFADL 229
++ L D KR + + LL H + + P E K F L
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHL 283
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGS--CLHLMKIAYQDGF--EESAIGSILKET 58
++ HP+++ ++ D L++V FM +G+ C ++K A GF E+ +++
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFM-DGADLCFEIVKRA-DAGFVYSEAVASHYMRQI 141
Query: 59 LKALDYLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
L+AL Y H IHRDVK +LL + + VKL FGV+ + ++G R VGT
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGT 198
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
P +MAPEV++ Y D+W G+ L G PF Y + L I ++
Sbjct: 199 PHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNP 255
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ S+S K++V L+ D +R T + L H + K
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +++ DFG++ R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 121
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLP 176
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 177 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 230
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 231 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 67 MKKIRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-SILKETL 59
+S ++HPN+++ Y + + + + +VM + GS +++ A + +A S +
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 60 KALDYLHR---QGHIHRDVKAGNILLDTNG-VVKLADFGVSACMFDTGDRQRSRNTFVGT 115
+ + YLH + IHRD+K N+LL G V+K+ DFG +AC D Q G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGS 167
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTIQNAPPGL 173
WMAPEV + GS Y+ K D++S+GI E+ PF + P +++ P L
Sbjct: 168 AAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 226
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
K K + ++ C KD ++RP+ E+++K
Sbjct: 227 ----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTELCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+A+FG S + R T GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLP 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 176 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 229
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 230 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++HPN+++ + + L++V + + G + +A+ E+ A ++ + A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAK-FRQIVSAV 126
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
Y H++ +HRD+KA N+LLD + +K+ADFG S F G++ + F G P + APE
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN-EFTFGNKL---DAFCGAPPYAAPE 182
Query: 123 VLQPGSGYNS-KADIWSFGITALELAHGHAPF 153
+ Q G Y+ + D+WS G+ L G PF
Sbjct: 183 LFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V+ +M++GS L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-SILKETL 59
+S ++HPN+++ Y + + + + +VM + GS +++ A + +A S +
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 60 KALDYLHR---QGHIHRDVKAGNILLDTNG-VVKLADFGVSACMFDTGDRQRSRNTFVGT 115
+ + YLH + IHRD+K N+LL G V+K+ DFG +AC D Q G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGS 166
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTIQNAPPGL 173
WMAPEV + GS Y+ K D++S+GI E+ PF + P +++ P L
Sbjct: 167 AAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 225
Query: 174 DYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
K K + ++ C KD ++RP+ E+++K
Sbjct: 226 ----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++VM +M++G L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLP 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 180 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 234 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R+ GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PE+++ G ++ K D+WS G+ E G PF T Q+ Y R +
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQDT-----YKRISR 220
Query: 181 FSKSF--------KEMVAMCLVKDQTKRPTAEKLLKHSF 211
+F +++++ L + ++RP ++L+H +
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P +++ SF +SNL++VM + G HL +I F E + +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 151
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +++ DFG + R + R GTP +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-------RVKGRTWXLCGTPEY 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 261 --FSSDLKDLLRNLLQVDLTKR 280
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 15/218 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGS--CLHLMKIAYQDGF--EESAIGSILKET 58
++ HP+++ ++ D L++V FM +G+ C ++K A GF E+ +++
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFM-DGADLCFEIVKRA-DAGFVYSEAVASHYMRQI 139
Query: 59 LKALDYLHRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
L+AL Y H IHRDVK +LL + + VKL FGV+ + ++G R VGT
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGT 196
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
P +MAPEV++ Y D+W G+ L G PF Y + L I ++
Sbjct: 197 PHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNP 253
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ S+S K++V L+ D +R T + L H + K
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
++ +++++ L + ++RP ++L+H +
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P + + SF +SNL++VM + G HL +I F E + +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ HPN++R + S + + +++ + G I ++ + E+ +++ L+A+
Sbjct: 77 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE--DIVAREYYSEADASHCIQQILEAV 134
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ H+ G +HRD+K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTPGYL 191
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y D+W+ G+ L G+ PF ++ A P ++D
Sbjct: 192 SPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD- 249
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
+ K+++ L + +KR TA + LKH + H
Sbjct: 250 --TVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 284
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P + + SF +SNL++VM + G HL +I F E + +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETL 59
+ ++ P + + SF +SNL++VM + G HL +I F E + +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIV 152
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN-TFVGTPCW 118
+YLH I+RD+K N+++D G +K+ DFG + R + R GTP +
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-------RVKGRTWXLCGTPEY 205
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+APE++ GYN D W+ G+ E+A G+ PF P+++ + +
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 261
Query: 179 KKFSKSFKEMVAMCLVKDQTKR 200
FS K+++ L D TKR
Sbjct: 262 --FSSDLKDLLRNLLQVDLTKR 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 124
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NIL+ VK+ DFG++ + D+G+ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P+ V ++ PP
Sbjct: 185 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-- 241
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK--HAKPPE 219
R + S +V L K+ R ++ + + +PPE
Sbjct: 242 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 234 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG+ + D R F P W
Sbjct: 293 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF---PIKWT 349
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P YP M V + G
Sbjct: 350 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCP 404
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 405 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DHPN+++ Y F ++V G +I + F E I+++ L +
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGIT 146
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y+H+ +HRD+K N+LL++ + +++ DFG+S F+ + + + +GT ++A
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDK---IGTAYYIA 202
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ K D+WS G+ L G PF+ + L ++ + + KK
Sbjct: 203 PEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKYTFELPQWKK 259
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
S+S K+++ L + R +A L H + +
Sbjct: 260 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 58 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 174 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 229 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTXLCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 56 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 171
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 172 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 226
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 227 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKAL 62
+ HP ++ + SF L+ V+ ++ G HL + + F E E AL
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASAL 152
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH ++RD+K NILLD+ G + L DFG+ + + + +TF GTP ++APE
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPE 209
Query: 123 VL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
VL QP Y+ D W G E+ +G PF + + I N P L
Sbjct: 210 VLHKQP---YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQL----KPN 261
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAE----KLLKHSFF 212
+ S + ++ L KD+TKR A+ ++ H FF
Sbjct: 262 ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGS---------- 53
++H V+R Y +++ N M + + S L + ++G I S
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 54 --ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGD--RQRSR 109
+ ++ L+AL Y+H QG IHRD+K NI +D + VK+ DFG++ + + D + S+
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 110 N---------TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFS----KY 156
N + +GT ++A EVL YN K D++S GI E+ + PFS +
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235
Query: 157 PPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+K L PP D+D +K K K+++ + + D KRP A LL
Sbjct: 236 NILKKLRSVSIEFPP--DFDDNK--MKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + TF GTP ++APEVL+
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLE 181
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 182 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 232
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 233 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 284
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 316 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 431
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 432 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 486
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 124
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NI++ VK+ DFG++ + D+G+ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P+ V ++ PP
Sbjct: 185 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-- 241
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK--HAKPPE 219
R + S +V L K+ R ++ + + +PPE
Sbjct: 242 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLP 177
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 178 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 231
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ +++++ L + ++RP ++L+H
Sbjct: 232 --VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETLK 60
S + HPN++R Y F + +++++ + G+ L K++ F+E + + E
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELAN 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+LL + G +K+ADFG S + R GT ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTIQNAPPGLDYDRD 178
PE+++ G ++ K D+WS G+ E G PF + Y + ++ P
Sbjct: 175 PEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF----- 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
++ +++++ L + ++RP ++L+H +
Sbjct: 229 --VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + TF GTP ++APEVL+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLE 178
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 179 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 229
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 281
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 134
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N L++ GVVK++DFG+S + D + + F P W PE
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF---PVRWSPPE 191
Query: 123 VLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
VL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 192 VLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPHLA 246
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 247 SEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 4 IDHPNVIRAYCSFVVDSN---LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+DHPNV++ + D N L++V + +G +M++ E ++ +K
Sbjct: 93 LDHPNVVKL-VEVLDDPNEDHLYMVFELVNQGP---VMEVPTLKPLSEDQARFYFQDLIK 148
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
++YLH Q IHRD+K N+L+ +G +K+ADFGVS F D S NT VGTP +MA
Sbjct: 149 GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN-EFKGSDALLS-NT-VGTPAFMA 205
Query: 121 PEVL-QPGSGYNSKA-DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
PE L + ++ KA D+W+ G+T G PF +++ + + L++
Sbjct: 206 PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD---ERIMCLHSKIKSQALEFPDQ 262
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
++ K+++ L K+ R ++ H
Sbjct: 263 PDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + TF GTP ++APEVL+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLE 178
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
Y D W G+ E+ G PF +++LM P + S
Sbjct: 179 DND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 229
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 281
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 50 AIGSILKETLKALDYLHRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRS 108
I I+K L + Y+H + +I HRDVK NIL+D NG VKL+DFG S M D + S
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG-S 210
Query: 109 RNTFVGTPCWMAPEVLQPGSGYN-SKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ 167
R GT +M PE S YN +K DIWS GI + + PFS +K+ L+ +
Sbjct: 211 R----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS----LKISLVELF 262
Query: 168 N 168
N
Sbjct: 263 N 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 233 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 348
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P YP M V + G
Sbjct: 349 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCP 403
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD+ A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 124
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NI++ VK+ DFG++ + D+G+ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P+ V ++ PP
Sbjct: 185 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-- 241
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK--HAKPPE 219
R + S +V L K+ R ++ + + +PPE
Sbjct: 242 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 233 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 348
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P YP M V + G
Sbjct: 349 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCP 403
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN+I + F +++ +++ ++ G + A ++ E LK+ L +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 122
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH + H D+K NI+L V +KL DFG+ A + G+ +N F GTP ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGN--EFKNIF-GTPEFV 178
Query: 120 APEVL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
APE++ +P +AD+WS G+ L G +PF + L ++YD
Sbjct: 179 APEIVNYEP---LGLEADMWSIGVITYILLSGASPFLGETKQETL-----TNISAVNYDF 230
Query: 178 DKKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+++ S+ K+ + LVKD +R T + L+HS+ K
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 124
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NI++ VK+ DFG++ + D+G+ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P+ V ++ PP
Sbjct: 185 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-- 241
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK--HAKPPE 219
R + S +V L K+ R ++ + + +PPE
Sbjct: 242 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
D + + + +F ++ L++VM + G L L+ + + L E + A+D
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS-KFGERIPAEMARFYLAEIVMAIDS 177
Query: 65 LHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
+HR G++HRD+K NILLD G ++LADFG +C+ D VGTP +++PE+L
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 125 QP------GSGYNSKADIWSFGITALELAHGHAPF 153
Q Y + D W+ G+ A E+ +G PF
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ HPN++R + S + + +++ + G I ++ + E+ +++ L+A+
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE--DIVAREYYSEADASHCIQQILEAV 123
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ H+ G +HR++K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTPGYL 180
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y D+W+ G+ L G+ PF ++ A P ++D
Sbjct: 181 SPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD- 238
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
+ K+++ L + +KR TA + LKH + H
Sbjct: 239 --TVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++G L +K + + +
Sbjct: 67 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 183 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C KD +RPT E L +F +P
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 60 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 175
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 176 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 230
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+IR +V +M GS ++ DG F + +L+
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVG 161
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL G++HRD+ A N+L+D+N V K++DFG+S + D D + W
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + + ++S +D+WSFG+ E LA+G P+ V I + G
Sbjct: 222 APEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV----ISSVEEGYRLPAP 276
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ +RP +++
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + ++++ +MA+GS L +K + + +
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R+ +IHRD++A N+L+ + + K+ADFG++ + D R F P W
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---PIKWT 178
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G + K+D+WSFGI E+ +G P+ V+ Q G R
Sbjct: 179 APEAINFGC-FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ----GYRMPRV 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ MC + +RPT + L
Sbjct: 234 ENCPDELYDIMKMCWKEKAEERPTFDYL 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M +GS L +K + + + +
Sbjct: 58 MKKLKHDKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R +IHRD+++ NIL+ + K+ADFG++ + D R F P W
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF---PIKWT 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ +VL + G
Sbjct: 174 APEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL----EQVERGYRMPCP 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ S E++ C KD +RPT E L +F +P
Sbjct: 229 QDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 30/231 (12%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKALDYL 65
P + + + F L+ VM ++ G + H+ ++ F+E E L +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFL 458
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL- 124
+G I+RD+K N++LD+ G +K+ADFG+ C + D ++ F GTP ++APE++
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTK-XFCGTPDYIAPEIIA 515
Query: 125 -QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
QP Y D W+FG+ E+ G APF ++ +++ + + K
Sbjct: 516 YQP---YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH---------NVAYPK 563
Query: 184 SF-KEMVAMC---LVKDQTKR----PTAEKLLK-HSFFKHAKPPELSVKKL 225
S KE VA+C + K KR P E+ +K H+FF++ +L K++
Sbjct: 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 614
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M++GS L +K + + +
Sbjct: 233 MKKLRHEKLVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 348
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P YP M V + G
Sbjct: 349 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCP 403
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLE 178
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 179 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 229
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG---FEESAIGSILKETLK 60
+ HPN+I +F SN+ +V FM +++ +D S I + + TL+
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMETD-----LEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L+YLH+ +HRD+K N+LLD NGV+KLADFG++ G R+ V T + A
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYXHQVVTRWYRA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL 146
PE+L Y D+W+ G EL
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL+
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLE 183
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 184 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 234
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 235 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 70 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 185
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 186 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 240
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 241 DNCPEELYQLMRLCWKERPEDRPTFDYL 268
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+IR +V +M GS ++ DG F + +L+
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVG 161
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL G++HRD+ A N+L+D+N V K++DFG+S + D D + W
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT 221
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + + ++S +D+WSFG+ E LA+G P+ V I + G
Sbjct: 222 APEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV----ISSVEEGYRLPAP 276
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ +RP +++
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 183
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 184 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 238
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLE 178
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 179 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 229
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 281
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 134
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC---WMA 120
YL + +HRD+ A N L++ GVVK++DFG+S + D D S VG+ W
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS---VGSKFPVRWSP 189
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEVL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 190 PEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPH 244
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 114
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC---WMA 120
YL + +HRD+ A N L++ GVVK++DFG+S + D + VG+ W
Sbjct: 115 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP 169
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEVL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 170 PEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPH 224
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YL + +HRD+ A N L++ GVVK++DFG+S + D + SR + W PEV
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSRGSKFPVR-WSPPEV 177
Query: 124 LQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFS 182
L S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R S
Sbjct: 178 LMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPHLAS 232
Query: 183 KSFKEMVAMCLVKDQTKRPTAEKLL 207
+ ++ C + +RPT + LL
Sbjct: 233 EKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + +++V +++ G L+ ++ ++ G E S + + + +
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCE 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC--- 117
+ +L IHRD+ A N L+D + VK++DFG++ + D D+ S VGT
Sbjct: 116 GMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSS---VGTKFPVK 170
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
W APEV Y+SK+D+W+FGI E+ + G P+ Y +V+L Q G
Sbjct: 171 WSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ----GHRLY 225
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
R S + +++ C + KRPT ++LL
Sbjct: 226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC---WMA 120
YL + +HRD+ A N L++ GVVK++DFG+S + D D S VG+ W
Sbjct: 119 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS---VGSKFPVRWSP 173
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEVL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 174 PEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPH 228
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 229 LASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 15/217 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M ++HPNV++ D L + ++ G+ ++K + + S S K+
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK-SMDSQYPWSQRVSFAKDIAS 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR-----------QRSR 109
+ YLH IHRD+ + N L+ N V +ADFG++ M D + ++ R
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNA 169
T VG P WMAPE++ G Y+ K D++SFGI E+ Y P + N
Sbjct: 180 YTVVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--NV 236
Query: 170 PPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
LD SF + C D KRP+ KL
Sbjct: 237 RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + +F L VM + G ++ + F E E + AL+YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQ 125
H + ++RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL+
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLE 178
Query: 126 PGSGYNSKADIWSFGITALELAHGHAPFSKYPP---MKVLLMTIQNAPPGLDYDRDKKFS 182
+ Y D W G+ E+ G PF +++LM P + S
Sbjct: 179 -DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--------RTLS 229
Query: 183 KSFKEMVAMCLVKDQTKR-----PTAEKLLKHSFFKHAKPPELSVKKLFADLPPL 232
K ++A L KD +R A+++++H FF ++ KKL LPP
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL---LPPF 281
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC---WMA 120
YL + +HRD+ A N L++ GVVK++DFG+S + D D S VG+ W
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS---VGSKFPVRWSP 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEVL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 175 PEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPH 229
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 230 LASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 71 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 186
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 187 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 241
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 242 DNCPEELYQLMRLCWKERPEDRPTFDYL 269
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 30/231 (12%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKALDYL 65
P + + + F L+ VM ++ G + H+ ++ F+E E L +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFL 137
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL- 124
+G I+RD+K N++LD+ G +K+ADFG+ C + D ++ F GTP ++APE++
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTK-XFCGTPDYIAPEIIA 194
Query: 125 -QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
QP Y D W+FG+ E+ G APF ++ +++ + + K
Sbjct: 195 YQP---YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH---------NVAYPK 242
Query: 184 SF-KEMVAMC---LVKDQTKR----PTAEKLLK-HSFFKHAKPPELSVKKL 225
S KE VA+C + K KR P E+ +K H+FF++ +L K++
Sbjct: 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 293
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H +++ Y ++++ +MA G L+ ++ + F+ + + K+ +A++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAME 125
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC---WMA 120
YL + +HRD+ A N L++ GVVK++DFG+S + D D S VG+ W
Sbjct: 126 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS---VGSKFPVRWSP 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PEVL S ++SK+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 181 PEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRPH 235
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
S+ ++ C + +RPT + LL
Sbjct: 236 LASEKVYTIMYSCWHEKADERPTFKILL 263
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ HPN++R + S + ++V + G I ++ + E+ + + L+++
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE--DIVAREYYSEADASHCIHQILESV 143
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+++H+ +HRD+K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFGFAGTPGYL 200
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y DIW+ G+ L G+ PF K+ A P ++D
Sbjct: 201 SPEVLRKDP-YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD- 258
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ K ++ L + KR TA++ LKH
Sbjct: 259 --TVTPEAKNLINQMLTINPAKRITADQALKH 288
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF---PIKWT 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 178 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 178 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 124
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NI++ VK+ DFG++ + D+G+ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P V ++ PP
Sbjct: 185 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSA-- 241
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK--HAKPPE 219
R + S +V L K+ R ++ + + +PPE
Sbjct: 242 -RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGD--RQRSRN- 110
+ ++ L+AL Y+H QG IHRD+K NI +D + VK+ DFG++ + + D + S+N
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 111 --------TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFS----KYPP 158
+ +GT ++A EVL YN K D++S GI E+ + PFS +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+K L PP D+D +K K K+++ + + D KRP A LL
Sbjct: 238 LKKLRSVSIEFPP--DFDDNK--MKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + ++++ FMA+GS L +K + + +
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R+ +IHRD++A N+L+ + + K+ADFG++ + D R F P W
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---PIKWT 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G + K+++WSFGI E+ +G P+ P + + G R
Sbjct: 178 APEAINFGC-FTIKSNVWSFGILLYEIVTYGKIPY----PGRTNADVMSALSQGYRMPRM 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ MC + +RPT + L
Sbjct: 233 ENCPDELYDIMKMCWKEKAEERPTFDYL 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + + +V +M++GS L +K + + +
Sbjct: 57 MKKLRHEKLVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIKWT 172
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 173 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 227
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 268
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 64 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 180 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 234
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 235 DNCPEELYQLMRLCWKERPEDRPTFDYL 262
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 156
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 214
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 215 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 272
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 273 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 63 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 178
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 179 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 233
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 234 DNCPEELYQLMRLCWKERPEDRPTFDYL 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M +GS L +K + + +
Sbjct: 64 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWT 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P+ P V + G
Sbjct: 180 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCP 234
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 72 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 187
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 188 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 242
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 243 DNCPEELYQLMRLCWKERPEDRPTFDYL 270
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETLK 60
S + HPN++R Y F +++++ F G L K + G F+E + ++E
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELAD 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+L+ G +K+ADFG S R GT ++
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTLDYLP 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PE+++ G ++ K D+W G+ E G PF
Sbjct: 181 PEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETLK 60
S + HPN++R Y F +++++ F G L K + G F+E + ++E
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELAD 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+L+ G +K+ADFG S R GT ++
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTLDYLP 181
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PE+++ G ++ K D+W G+ E G PF
Sbjct: 182 PEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 129
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 188 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 245
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 246 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIKWT 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 178 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETLK 60
S + HPN++R Y F +++++ F G L K + G F+E + ++E
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFMEELAD 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
AL Y H + IHRD+K N+L+ G +K+ADFG S R GT ++
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTLDYLP 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PE+++ G ++ K D+W G+ E G PF
Sbjct: 181 PEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 183
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 184 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 238
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 146
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 205 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 262
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 263 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 67 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 183 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 237
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 238 DNCPEELYQLMRLCWKERPEDRPTFDYL 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ HPN++R + S + ++V + G I ++ + E+ +++ L+++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE--DIVAREYYSEADASHCIQQILESV 116
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
++ H G +HRD+K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYL 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y D+W+ G+ L G+ PF ++ A P ++D
Sbjct: 174 SPEVLRKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD- 231
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+ K+++ L + KR TA + LKH +
Sbjct: 232 --TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 57 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 172
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 173 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 227
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 228 DNCPEELYQLMRLCWKERPEDRPTFDYL 255
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H +++ Y + V + +++V +M +GS L +K + + +
Sbjct: 64 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ Y+ R ++HRD++A NIL+ N V K+ADFG++ + D R F P W
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF---PIKWT 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE G + K+D+WSFGI EL G P YP M V + G
Sbjct: 180 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCP 234
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL--LKHSFFKHAKP 217
+ +S +++ C K+ +RPT E L +F +P
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + ++++ FM G+ L ++ + + + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTA 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKV 161
PE L ++ K+D+W+FG+ E+A +G +P+ P +V
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I H N++ + ++ ++VM ++ G +I + + E ++++ L A+
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFD--RILERGVYTEKDASLVIQQVLSAVK 120
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
YLH G +HRD+K N+L T N + + DFG+S ++ +T GTP ++A
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-----EQNGIMSTACGTPGYVA 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEVL Y+ D WS G+ L G+ PF + K L I+ +
Sbjct: 176 PEVLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYEFESPFWDD 233
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+S K+ + L KD +R T EK L H
Sbjct: 234 ISESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 1 MSLIDHPNVI-RAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKET 58
++L+D P + + + F L+ VM ++ G + H+ ++ F+E E
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEI 129
Query: 59 LKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
L +LH++G I+RD+K N++LD+ G +K+ADFG+ C D +R F GTP +
Sbjct: 130 SIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM--CKEHMMDGVTTRE-FCGTPDY 186
Query: 119 MAPEVL--QPGSGYNSKADIWSFGITALELAHGHAPF 153
+APE++ QP Y D W++G+ E+ G PF
Sbjct: 187 IAPEIIAYQP---YGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN+I + F +++ +++ ++ G + A ++ E LK+ L +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 143
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH + H D+K NI+L V +KL DFG+ A + G+ +N F GTP ++
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGN--EFKNIF-GTPEFV 199
Query: 120 APEVL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
APE++ +P +AD+WS G+ L G +PF + L ++YD
Sbjct: 200 APEIVNYEP---LGLEADMWSIGVITYILLSGASPFLGETKQETL-----TNISAVNYDF 251
Query: 178 DKKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+++ S+ K+ + LVKD +R + L+HS+ K
Sbjct: 252 DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHRD++A NIL+ K+ADFG++ + D R F P W
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 178 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 232
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ ++ ++V +M G+ L ++ ++ + + +
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N VVK+ADFG+S M TGD + W A
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 199
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L + ++ K+D+W+FG+ E+A +G +P+
Sbjct: 200 PESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPN+I + F +++ +++ ++ G + A ++ E LK+ L +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 129
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH + H D+K NI+L V +KL DFG+ A + G+ +N F GTP ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGN--EFKNIF-GTPEFV 185
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE++ +AD+WS G+ L G +PF + L ++YD D+
Sbjct: 186 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGETKQETL-----TNISAVNYDFDE 239
Query: 180 KF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
++ S+ K+ + LVKD +R + L+HS+ K
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTA 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKV 161
PE L ++ K+D+W+FG+ E+A +G +P+ P +V
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+I + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TAVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG++ + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNL----WVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILKE 57
++HP ++ Y + ++ ++VM ++ + L I + +G + AI ++ +
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYV---DGVTLRDIVHTEGPMTPKRAI-EVIAD 141
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+AL++ H+ G IHRDVK NI++ VK+ DFG++ + D+G+ +GT
Sbjct: 142 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN--APPGLDY 175
+++PE + G ++++D++S G E+ G PF+ P+ V ++ PP
Sbjct: 202 YLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-- 258
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKR 200
R + S +V L K+ R
Sbjct: 259 -RHEGLSADLDAVVLKALAKNPENR 282
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ HPN++R + S + ++V + G I ++ + E+ +++ L+++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE--DIVAREYYSEADASHCIQQILESV 116
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
++ H G +HRD+K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYL 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y D+W+ G+ L G+ PF ++ A P ++D
Sbjct: 174 SPEVLRKDP-YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD- 231
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
+ K+++ L + KR TA + LKH +
Sbjct: 232 --TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + ++++ FM G+ L ++ + + + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTA 181
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 182 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G +HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + SF L VM + G ++ + F E E + ALDYL
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 66 HRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
H + ++ +RD+K N++LD +G +K+ DFG+ G + TF GTP ++APEVL
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVL 324
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKS 184
+ + Y D W G+ E+ G PF K+ + + + +F ++
Sbjct: 325 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRFPRT 374
Query: 185 F----KEMVAMCLVKDQTKR-----PTAEKLLKHSFF 212
K +++ L KD +R A+++++H FF
Sbjct: 375 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + SF L VM + G ++ + F E E + ALDYL
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 66 HRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
H + ++ +RD+K N++LD +G +K+ DFG+ G + TF GTP ++APEVL
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVL 321
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKS 184
+ Y D W G+ E+ G PF K+ + + + +F ++
Sbjct: 322 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRFPRT 371
Query: 185 F----KEMVAMCLVKDQTKR-----PTAEKLLKHSFF 212
K +++ L KD +R A+++++H FF
Sbjct: 372 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V +M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+ + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+ HP++I+ Y +++ +V+ + A G I + E ++ +
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDY--IVEKKRMTEDEGRRFFQQIIC 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++Y HR +HRD+K N+LLD N VK+ADFG+S M D + S G+P + A
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAA 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PEV+ + D+WS GI + G PF
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++R + S +S ++V + G I ++ + E+ +++ L+++
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIA 142
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y H G +HR++K N+LL + VKLADFG++ + D+ + + F GTP +++
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLS 198
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PEVL+ Y+ DIW+ G+ L G+ PF
Sbjct: 199 PEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + ++++ FM G+ L ++ + + + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 185
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + ++++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 7 PNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH 66
P VI + + S + +++ + A G L + E+ + ++K+ L+ + YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 67 RQGHIHRDVKAGNILLDTN---GVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ +H D+K NILL + G +K+ DFG+S G R +GTP ++APE+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELRE-IMGTPEYLAPEI 204
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK--KF 181
L + D+W+ GI A L +PF + L Q +DY +
Sbjct: 205 LNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---VNVDYSEETFSSV 260
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
S+ + + LVK+ KRPTAE L HS+ +
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 4 IDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKE 57
+ H NVI F S+L ++VMPFM L KI + F E I ++ +
Sbjct: 98 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD----LQKIMGME-FSEEKIQYLVYQ 152
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
LK L Y+H G +HRD+K GN+ ++ + +K+ DFG++ D + + +V T
Sbjct: 153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMT--GYVVTRW 206
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ-NAPPGLDYD 176
+ APEV+ YN DIWS G E+ G F + L ++ PG ++
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266
Query: 177 RD------------------KKFSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSF 211
+ K F++ F +++ L D KR TA + L H F
Sbjct: 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326
Query: 212 FKHAKPPE 219
F+ + PE
Sbjct: 327 FEPFRDPE 334
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + ++++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+ HP++I+ Y V+ S ++M G+ L I +D E ++ +
Sbjct: 62 LRLLRHPHIIKLYD--VIKSKDEIIMVIEYAGNEL-FDYIVQRDKMSEQEARRFFQQIIS 118
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++Y HR +HRD+K N+LLD + VK+ADFG+S M D + S G+P + A
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAA 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+ + D+WS G+ + PF + VL I N Y K
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKF 229
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK-----HAKPPEL 220
S ++ L+ + R + ++++ +FK + PP+L
Sbjct: 230 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 274
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+ HP++I+ Y V+ S ++M G+ L I +D E ++ +
Sbjct: 58 LRLLRHPHIIKLYD--VIKSKDEIIMVIEYAGNEL-FDYIVQRDKMSEQEARRFFQQIIS 114
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++Y HR +HRD+K N+LLD + VK+ADFG+S M D + S G+P + A
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAA 170
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+ + D+WS G+ + PF + VL I N Y K
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKF 225
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK-----HAKPPEL 220
S ++ L+ + R + ++++ +FK + PP+L
Sbjct: 226 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 270
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTFTAHAGAKFPIKWTA 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKV 161
PE L ++ K+D+W+FG+ E+A +G +P+ P +V
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPAFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
L+ H N++R + S + ++V + G I ++ + E+ +++ L+A+
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE--DIVAREYYSEADASHCIQQILEAV 116
Query: 63 DYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ H+ G +HRD+K N+LL + VKLADFG++ + Q++ F GTP ++
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYL 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAP--PGLDYDR 177
+PEVL+ Y DIW+ G+ L G+ PF K+ A P ++D
Sbjct: 174 SPEVLRK-EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD- 231
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
+ K ++ L + KR TA + LKH +
Sbjct: 232 --TVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++ F L +V + + + LH + YQ G E + SI +TL+A++
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEY-CDHTVLHELD-RYQRGVPEHLVKSITWQTLQAVN 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H+ IHRDVK NIL+ + V+KL DFG + + D V T + +PE+
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE---VATRWYRSPEL 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTIQNAPPGLD--YDR 177
L + Y D+W+ G EL G P S + ++ T+ + P +
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 178 DKKFSK-------------------SFKEMVAM--CLVKDQTKRPTAEKLLKHSFFKHAK 216
++ FS S+ + + CL D T+R T E+LL H +F++ +
Sbjct: 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292
Query: 217 PPE 219
E
Sbjct: 293 EIE 295
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 46/242 (19%)
Query: 6 HPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
H NVI F D L ++VMPFM L K+ + E I ++ + L
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQML 138
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT--FVGTPC 117
K L Y+H G IHRD+K GN+ ++ + +K+ DFG++ RQ V T
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA--------RQADSEMXGXVVTRW 190
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTIQNAPPG--- 172
+ APEV+ Y DIWS G E+ G F + L +M + PP
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 173 --LDYDRDKKFSKSFKE-------------------MVAMCLVKDQTKRPTAEKLLKHSF 211
L D K + K E ++ LV D +R TA + L H +
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310
Query: 212 FK 213
F+
Sbjct: 311 FE 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V M GS ++ + F + +L+
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 129
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 188 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 245
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 246 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPNVI + + ++ FM GS ++ DG F + +L+
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIA 145
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMF-DTGDRQRSRNTFVGTPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + DT D + P
Sbjct: 146 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLD 174
W APE +Q + S +D+WS+GI E +++G P+ V+ Q+ PP +D
Sbjct: 206 WTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMD 264
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
+ +++ C KD+ RP
Sbjct: 265 C------PSALHQLMLDCWQKDRNHRP 285
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + H ++R Y + V ++++ +M GS + +K + + + + +
Sbjct: 58 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ ++ + +IHR+++A NIL+ K+ADFG++ + D R F P W
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWT 173
Query: 120 APEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE + G+ + K+D+WSFGI E+ HG P+ +V IQN G R
Sbjct: 174 APEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 228
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
+ +++ +C + RPT + L
Sbjct: 229 DNCPEELYQLMRLCWKERPEDRPTFDYL 256
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+ HP++I+ Y V+ S ++M G+ L I +D E ++ +
Sbjct: 67 LRLLRHPHIIKLYD--VIKSKDEIIMVIEYAGNEL-FDYIVQRDKMSEQEARRFFQQIIS 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++Y HR +HRD+K N+LLD + VK+ADFG+S M D + S G+P + A
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAA 179
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+ + D+WS G+ + PF + VL I N Y K
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKF 234
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S ++ L+ + R + ++++ +FK P L
Sbjct: 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 274
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 185
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+ L+ HP++I+ Y V+ S ++M G+ L I +D E ++ +
Sbjct: 68 LRLLRHPHIIKLYD--VIKSKDEIIMVIEYAGNEL-FDYIVQRDKMSEQEARRFFQQIIS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++Y HR +HRD+K N+LLD + VK+ADFG+S M D + S G+P + A
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKK 180
PEV+ + D+WS G+ + PF + VL I N Y K
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKF 235
Query: 181 FSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S ++ L+ + R + ++++ +FK P L
Sbjct: 236 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYL 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTA 185
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 185
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 193
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 194 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 185
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 181
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 184
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 185 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 4 IDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKE 57
+ H NVI F S+L ++VMPFM + +M + F E I ++ +
Sbjct: 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLK----FSEEKIQYLVYQ 134
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
LK L Y+H G +HRD+K GN+ ++ + +K+ DFG++ D + + +V T
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMT--GYVVTRW 188
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ-NAPPGLDYD 176
+ APEV+ YN DIWS G E+ G F + L ++ PG ++
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248
Query: 177 RD------------------KKFSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSF 211
+ K F++ F +++ L D KR TA + L H F
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308
Query: 212 FKHAKPPE 219
F+ + PE
Sbjct: 309 FEPFRDPE 316
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTI----QNAPPGLDYD 176
L Y++ DIWS G E+ A F S+ + + T+ + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 41 AYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMF 100
A+ E+ + L++TL AL +LH QG +H DVK NI L G KL DFG+ +
Sbjct: 149 AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
Query: 101 DTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELA------HGHAPFS 154
G + G P +MAPE+LQ Y + AD++S G+T LE+A HG +
Sbjct: 209 TAGAGEVQE----GDPRYMAPELLQ--GSYGTAADVFSLGLTILEVACNMELPHGGEGWQ 262
Query: 155 KYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ + PP + S + ++ M L D R TAE LL
Sbjct: 263 Q--------LRQGYLPP----EFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 175
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 178
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 31/239 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKALDY 64
H NV+ F + ++V M GS L H+ K + F E ++++ ALD+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDF 126
Query: 65 LHRQGHIHRDVKAGNILLDT-NGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPC---- 117
LH +G HRD+K NIL + N V VK+ DFG+ + + GD + TPC
Sbjct: 127 LHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 118 WMAPEVLQP----GSGYNSKADIWSFGITALELAHGHAPF-------------SKYPPMK 160
+MAPEV++ S Y+ + D+WS G+ L G+ PF P +
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 161 -VLLMTIQNAPPGLDYDRD-KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
+L +IQ D+D S + K++++ LV+D +R +A ++L+H + + P
Sbjct: 247 NMLFESIQEGKYEFP-DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 181
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 445 MRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 502
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 559
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 560 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++R + S +S ++V + G I ++ + E+ +++ L+++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIA 119
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y H G +HR++K N+LL + VKLADFG++ + D+ + + F GTP +++
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLS 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PEVL+ Y+ DIW+ G+ L G+ PF
Sbjct: 176 PEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 65 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL---PIKWM 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 180 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 175
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTA 181
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 182 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 180
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGD--RQRSRN- 110
+ ++ L+AL Y+H QG IHR++K NI +D + VK+ DFG++ + + D + S+N
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 111 --------TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFS----KYPP 158
+ +GT ++A EVL YN K D +S GI E + PFS +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNI 237
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+K L PP D+D +K K K+++ + + D KRP A LL
Sbjct: 238 LKKLRSVSIEFPP--DFDDNK--XKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 175
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL---KE 57
M + H +++ + + V ++++ FMA+GS L +K D + + ++ +
Sbjct: 64 MKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLK---SDEGSKQPLPKLIDFSAQ 119
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+ + ++ ++ +IHRD++A NIL+ + V K+ADFG++ + D R F P
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PI 176
Query: 118 -WMAPEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPM 159
W APE + GS + K+D+WSFGI +E+ +G P YP M
Sbjct: 177 KWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIP---YPGM 216
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 178
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL---KE 57
M + H +++ + + V ++++ FMA+GS L +K D + + ++ +
Sbjct: 237 MKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLK---SDEGSKQPLPKLIDFSAQ 292
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+ + ++ ++ +IHRD++A NIL+ + V K+ADFG++ + D R F P
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PI 349
Query: 118 -WMAPEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPM 159
W APE + GS + K+D+WSFGI +E+ +G P YP M
Sbjct: 350 KWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIP---YPGM 389
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHRD+ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++R + S +S ++V + G I ++ + E+ +++ L+++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIA 119
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y H G +HR++K N+LL + VKLADFG++ + D+ + + F GTP +++
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLS 175
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PEVL+ Y+ DIW+ G+ L G+ PF
Sbjct: 176 PEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++R + S +S ++V + G I ++ + E+ +++ L+++
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE--DIVAREFYSEADASHCIQQILESIA 118
Query: 64 YLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
Y H G +HR++K N+LL + VKLADFG++ + D+ + + F GTP +++
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLS 174
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
PEVL+ Y+ DIW+ G+ L G+ PF
Sbjct: 175 PEVLKKDP-YSKPVDIWACGVILYILLVGYPPF 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 62 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 119
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 176
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 177 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 67 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 181
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 182 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 1 MSLIDHPNVIRAYCSFVV-----DSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL 55
+ +HPNV+R + V ++ L +V + + +L K+ + G I ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMM 126
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
+ L+ LD+LH +HRD+K NIL+ ++G +KLADFG++ Q + + V T
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVT 182
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTIQNAPPGL 173
+ APEVL S Y + D+WS G E+ F + L ++ + P
Sbjct: 183 LWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 174 DYDRD----------------KKFSKSF----KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+ RD +KF K+++ CL + KR +A L H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 214 HAKPPELSVKKLFADLPPLWN 234
E + L + LPP N
Sbjct: 302 DL---ERCKENLDSHLPPSQN 319
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 65 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 180 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 68 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 182
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 183 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHPN+IR + +V M GS ++ + F + +L+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIAS 158
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
+ YL G +HRD+ A NIL+++N V K++DFG+S + D D + + T G P W
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRW 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLDY 175
+PE + + S +D+WS+GI E +++G P+ + V+ + PP +D
Sbjct: 217 TSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD- 274
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+ +++ C KD+ RP E+++
Sbjct: 275 -----CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 93 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 150
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 207
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 208 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 175
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 65 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 180 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 127
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 183
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 184 APEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 237
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHR++ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 387
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 388 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD- 176
APE++ +P +AD+WS G+ L G +PF + T+ N ++Y+
Sbjct: 185 APEIVNYEP---LGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEF 236
Query: 177 RDKKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F++ M + G I S L + L+ L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 176
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L +VM + + G +I F E ++ + + Y
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVS-ACMFDTGDRQRSRNTFVGTPCWMAPE 122
H HRD+K N LLD + +K+ADFG S A + + + + VGTP ++APE
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK-----SAVGTPAYIAPE 186
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL------LMTIQNAPPGLDYD 176
VL AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY- 243
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S + +++ V D KR + ++ H +F P +L
Sbjct: 244 --VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADL 285
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 78/195 (40%), Gaps = 42/195 (21%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD---------------- 44
M + HPN+ R Y + + + +VM G L + + D
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 45 --------------GFEESA--------IGSILKETLKALDYLHRQGHIHRDVKAGNILL 82
GF ES I +I+++ AL YLH QG HRD+K N L
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 83 DTNGV--VKLADFGVSACMFDTGDRQ-RSRNTFVGTPCWMAPEVLQ-PGSGYNSKADIWS 138
TN +KL DFG+S + + + T GTP ++APEVL Y K D WS
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 139 FGITALELAHGHAPF 153
G+ L G PF
Sbjct: 262 AGVLLHLLLMGAVPF 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 127
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 183
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 184 APEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 237
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHR++ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 426
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 427 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F++ M + G I S L + L+ L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 175
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 70 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 127
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ +N VKL DFG+S M D+ + S+ P WM
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 185 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M I HPN+++ + +++ FM G+ L ++ + + + +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A++YL ++ IHR++ A N L+ N +VK+ADFG+S M TGD + W A
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTA 384
Query: 121 PEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
PE L ++ K+D+W+FG+ E+A +G +P+
Sbjct: 385 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F++ M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NVI + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TAVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F++ M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ +++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + SF L VM + G ++ + F E E + ALDYL
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 66 HRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
H + ++ +RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVL 183
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKS 184
+ + Y D W G+ E+ G PF K+ + + + +F ++
Sbjct: 184 E-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRFPRT 233
Query: 185 F----KEMVAMCLVKDQTKR-----PTAEKLLKHSFF 212
K +++ L KD +R A+++++H FF
Sbjct: 234 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + SF L VM + G ++ + F E E + ALDYL
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 66 HRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
H + ++ +RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVL 182
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKS 184
+ + Y D W G+ E+ G PF K+ + + + +F ++
Sbjct: 183 ED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRFPRT 232
Query: 185 F----KEMVAMCLVKDQTKR-----PTAEKLLKHSFF 212
K +++ L KD +R A+++++H FF
Sbjct: 233 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HP + SF L VM + G ++ + F E E + ALDYL
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 66 HRQGHI-HRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVL 124
H + ++ +RD+K N++LD +G +K+ DFG+ G + F GTP ++APEVL
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVL 181
Query: 125 QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKS 184
+ Y D W G+ E+ G PF K+ + + + +F ++
Sbjct: 182 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRFPRT 231
Query: 185 F----KEMVAMCLVKDQTKR-----PTAEKLLKHSFF 212
K +++ L KD +R A+++++H FF
Sbjct: 232 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPNV+ + +V+ FM G+ ++ DG F + +L+
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR--KHDGQFTVIQLVGMLRGIA 155
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + T G P
Sbjct: 156 AGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED--DPEAVYTTTGGKIPVR 213
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
W APE +Q + S +D+WS+GI E +++G P+ V I+ G
Sbjct: 214 WTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV----IKAIEEGYRLP 268
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+++ C K++ +RP E+++
Sbjct: 269 APMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L +VM + + G +I F E ++ + + Y
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
H HRD+K N LLD + +K+ DFG S + + VGTP ++APEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEV 187
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL------LMTIQNAPPGLDYDR 177
L AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S + +++ V D KR + ++ H +F P +L
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADL 285
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V F+ + M + G I S L + L+ L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 174
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTI----QNAPPGLDYD 176
L Y++ DIWS G E+ A F S+ + + T+ + PG+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D K FSK + +++ L D KR +A+ L H FF+
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NVI + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TAVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L +VM + + G +I F E ++ + + Y
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 130
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
H HRD+K N LLD + +K+ DFG S + + VGTP ++APEV
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEV 186
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL------LMTIQNAPPGLDYDR 177
L AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 242
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S + +++ V D KR + ++ H +F P +L
Sbjct: 243 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADL 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NVI + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TSVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NVI + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TSVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
++ + + YLH Q +IHRD+ A N+LLD + +VK+ DFG++ + + + R R
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--------LMTIQ 167
W APE L+ Y + +D+WSFG+T EL H S+ PP K L MT+
Sbjct: 201 VFWYAPECLKEYKFYYA-SDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQGQMTVL 258
Query: 168 NAPPGLD----YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
L+ R K ++ C + + RPT E L+
Sbjct: 259 RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HPN++R Y F +++++ + G ++ + F+E +I++E AL
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALM 137
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
Y H + IHRD+K N+LL G +K+ADFG S R T GT ++ PE+
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-----VHAPSLRRKTMCGTLDYLPPEM 192
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPF 153
++ G +N K D+W G+ EL G+ PF
Sbjct: 193 IE-GRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L ++M M G ++ F E I+++ A+ +LH HRDVK N+L
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 82 L---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ + V+KL DFG F Q + T TP ++APEVL P Y+ D+WS
Sbjct: 161 YTSKEKDAVLKLTDFG-----FAKETTQNALQTPCYTPYYVAPEVLGP-EKYDKSCDMWS 214
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G PF + P MK + Q P ++ + S+ K+++ +
Sbjct: 215 LGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW---SEVSEDAKQLIRLL 271
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L D T+R T + + H +
Sbjct: 272 LKTDPTERLTITQFMNHPWI 291
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPNVI + + ++ FM GS ++ DG F + +L+
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIA 119
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMF-DTGDRQRSRNTFVGTPC- 117
+ YL ++HR + A NIL+++N V K++DFG+S + DT D + P
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLD 174
W APE +Q + S +D+WS+GI E +++G P+ V+ Q+ PP +D
Sbjct: 180 WTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMD 238
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
+ +++ C KD+ RP
Sbjct: 239 ------CPSALHQLMLDCWQKDRNHRP 259
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 8 NVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKALDYLH 66
N++ F D+ ++V + GS L H+ K Q F E ++++ ALD+LH
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQK---QKHFNEREASRVVRDVAAALDFLH 128
Query: 67 RQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF-------VGTPC-- 117
+G HRD+K NIL ++ V V C FD G + N+ + TPC
Sbjct: 129 TKGIAHRDLKPENILCESPEKVS----PVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 118 --WMAPEVLQ----PGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKV---------- 161
+MAPEV++ + Y+ + D+WS G+ + G+ PF +
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV 244
Query: 162 ----LLMTIQNAPPGLDYDRD-KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAK 216
L +IQ D+D S K++++ LV+D +R +A ++L+H + +
Sbjct: 245 CQNKLFESIQEGKYEFP-DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQA 303
Query: 217 P 217
P
Sbjct: 304 P 304
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
H NVI + + +++ +++ ++ G + A ++ E S +K+ L ++YL
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYL 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
H + H D+K NI+L + +KL DFG++ + D +N F GTP ++AP
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF-GTPEFVAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E++ +AD+WS G+ L G +PF + T+ N + YD D++F
Sbjct: 188 EIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI-TSVSYDFDEEF 241
Query: 182 ----SKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
S+ K+ + LVK+ KR T ++ L+H
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L ++M M G ++ F E I+++ A+ +LH HRDVK N+L
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 82 L---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ + V+KL DFG F Q + T TP ++APEVL P Y+ D+WS
Sbjct: 142 YTSKEKDAVLKLTDFG-----FAKETTQNALQTPCYTPYYVAPEVLGP-EKYDKSCDMWS 195
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G PF + P MK + Q P ++ + S+ K+++ +
Sbjct: 196 LGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW---SEVSEDAKQLIRLL 252
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L D T+R T + + H +
Sbjct: 253 LKTDPTERLTITQFMNHPWI 272
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 1 MSLIDHPNVIRAYCSFVV-----DSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL 55
+ +HPNV+R + V ++ L +V + + +L K+ + G I ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMM 126
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
+ L+ LD+LH +HRD+K NIL+ ++G +KLADFG++ Q + + V T
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVT 182
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTIQNAPPGL 173
+ APEVL S Y + D+WS G E+ F + L ++ + P
Sbjct: 183 LWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 174 DYDRD----------------KKFSKSF----KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+ RD +KF K+++ CL + KR +A L H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 1 MSLIDHPNVIRAYCSFVV-----DSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL 55
+ +HPNV+R + V ++ L +V + + +L K+ + G I ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMM 126
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
+ L+ LD+LH +HRD+K NIL+ ++G +KLADFG++ Q + + V T
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVT 182
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTIQNAPPGL 173
+ APEVL S Y + D+WS G E+ F + L ++ + P
Sbjct: 183 LWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241
Query: 174 DYDRD----------------KKFSKSF----KEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D+ RD +KF K+++ CL + KR +A L H +F+
Sbjct: 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACM--FDTGDRQRSRNTFVG 114
+ + L+YLH QG +H+D+K GN+LL T G +K++ GV+ + F D R+ G
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ---G 173
Query: 115 TPCWMAPEV---LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
+P + PE+ L SG+ K DIWS G+T + G PF K L I
Sbjct: 174 SPAFQPPEIANGLDTFSGF--KVDIWSAGVTLYNITTGLYPFEGDNIYK-LFENIGKGSY 230
Query: 172 GLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ D S K M L + KR + ++ +HS+F+ PP
Sbjct: 231 AIPGDCGPPLSDLLKGM----LEYEPAKRFSIRQIRQHSWFRKKHPP 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ L + + H +HRD+K NIL+D+N +K+ DFG++ + +T Q N +GT
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTV 176
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
+ +PE + G + DI+S GI E+ G PF+ + + + IQ++ P + D
Sbjct: 177 QYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTD 235
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKR 200
K +S ++ KD+ R
Sbjct: 236 VRKDIPQSLSNVILRATEKDKANR 259
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L ++M + + G +I F E ++ L + Y
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYC 132
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
H HRD+K N LLD + +K+ DFG S + + VGTP ++APEV
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEV 188
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFS------KYPPMKVLLMTIQNAPPGLDYDR 177
L AD+WS G+T + G PF Y +++++ + P
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD----- 243
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
D + S +++ V D R + ++ HS+F P +L
Sbjct: 244 DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADL 286
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
MS++ HP ++ + +F D+ + ++ FM+ G + + E+ A+ +++ K
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-EYMRQVCK 160
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT--NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
L ++H ++H D+K NI+ T + +KL DFG++A + D ++S GT +
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEF 216
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APEV + G D+WS G+ + L G +PF + L +++ +D
Sbjct: 217 AAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAF 274
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
S+ K+ + L+ D R T + L+H + P
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 314
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
MS++ HP ++ + +F D+ + ++ FM+ G + + E+ A+ +++ K
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV-EYMRQVCK 266
Query: 61 ALDYLHRQGHIHRDVKAGNILLDT--NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
L ++H ++H D+K NI+ T + +KL DFG++A + D ++S GT +
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEF 322
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APEV + G D+WS G+ + L G +PF + L +++ +D
Sbjct: 323 AAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAF 380
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
S+ K+ + L+ D R T + L+H + P
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 445 MRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 502
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ VKL DFG+S M D+ + S+ P WM
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 559
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 560 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCL-HLMKIAYQDGFEESAIGSILKETLKALDY 64
H NV+ F + ++V M GS L H+ K + F E ++++ ALD+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDF 126
Query: 65 LHRQGHIHRDVKAGNILLDT-NGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPC---- 117
LH +G HRD+K NIL + N V VK+ DF + + + GD + TPC
Sbjct: 127 LHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 118 WMAPEVLQP----GSGYNSKADIWSFGITALELAHGHAPF-------------SKYPPMK 160
+MAPEV++ S Y+ + D+WS G+ L G+ PF P +
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 161 -VLLMTIQNAPPGLDYDRD-KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKP 217
+L +IQ D+D S + K++++ LV+D +R +A ++L+H + + P
Sbjct: 247 NMLFESIQEGKYEFP-DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 15/224 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVD-SNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
M+ + H N+++ V + L++V +MA+GS + ++ + + +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 118
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+A++YL +HRD+ A N+L+ + V K++DFG+ T + +++T W
Sbjct: 119 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL------TKEASSTQDTGKLPVKWT 172
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE L+ + +++K+D+WSFGI E+ + G P+ + P V + G D
Sbjct: 173 APEALRE-AAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAP 227
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
+ E++ C D RP+ +L + +H K EL +
Sbjct: 228 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ--LEHIKTHELHL 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
I HPNVI + + +++ ++ +A G + A ++ E LK+ L +
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVY 128
Query: 64 YLHRQGHIHRDVKAGNILLDTNGV----VKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
YLH H D+K NI+L V +K+ DFG+ A D G+ +N F GTP ++
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGN--EFKNIF-GTPEFV 184
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD-RD 178
APE++ +AD+WS G+ L G +PF + T+ N ++Y+ D
Sbjct: 185 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV-SAVNYEFED 238
Query: 179 KKFSKS---FKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
+ FS + K+ + LVKD KR T + L+H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+I + +V +M GS +K DG F + +L+
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK--KNDGQFTVIQLVGMLRGIS 134
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL G++HRD+ A NIL+++N V K++DFG+S + D D + + T G P
Sbjct: 135 AGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIR 192
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
W APE + + S +D+WS+GI E +++G P+
Sbjct: 193 WTAPEAIA-FRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
++ + + YLH Q +IHR++ A N+LLD + +VK+ DFG++ + + + R R
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL 162
W APE L+ Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 184 VFWYAPECLKEYKFYYA-SDVWSFGVTLYELL-THCDSSQSPPTKFL 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 114
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 171
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 172 SPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 226
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ S +++ C + RP +LL+
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
++ + + YLH Q +IHR++ A N+LLD + +VK+ DFG++ + + + R R
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL 162
W APE L+ Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 184 VFWYAPECLKEYKFYYA-SDVWSFGVTLYELL-THCDSSQSPPTKFL 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M DHP++++ + ++ +W++M G +++ + + +++ +
Sbjct: 65 MRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
AL YL + +HRD+ A N+L+ VKL DFG+S M D+ + S+ P WM
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWM 179
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + + S +D+W FG+ E L HG PF
Sbjct: 180 APESIN-FRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 114
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 171
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 172 SPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 226
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ S +++ C + RP +LL+
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 117
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 174
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 175 SPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 229
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ S +++ C + RP +LL+
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ HP+++ Y F + +++V+ G +K + F E+ + + + +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGML 126
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YLH G +HRD+ N+LL N +K+ADFG++ + ++ T GTP +++PE+
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGTPNYISPEI 183
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSK 183
S + ++D+WS G L G PF L N DY+ S
Sbjct: 184 -ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----NKVVLADYEMPSFLSI 237
Query: 184 SFKEMVAMCLVKDQTKRPTAEKLLKHSF 211
K+++ L ++ R + +L H F
Sbjct: 238 EAKDLIHQLLRRNPADRLSLSSVLDHPF 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V + + M + G I S L + L+ L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEI 173
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 134
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 135 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 191
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 192 SPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 246
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
+ S +++ C + RP +LL+
Sbjct: 247 RLASTHVYQIMNHCWKERPEDRPAFSRLLR 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 112
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 169
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 170 SPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 224
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ S +++ C + RP +LL+
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ D + +NT
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR---DINNIDYYKNT 216
Query: 112 FVG-TPC-WMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQN 168
G P WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 217 TNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE- 274
Query: 169 APPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 ---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVD-SNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
M+ + H N+++ V + L++V +MA+GS + ++ + + +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+A++YL +HRD+ A N+L+ + V K++DFG+ T + +++T W
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL------TKEASSTQDTGKLPVKWT 181
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE L+ +++K+D+WSFGI E+ + G P+ + P V + G D
Sbjct: 182 APEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAP 236
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
+ E++ C D RP+ +L + +H K EL +
Sbjct: 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ--LEHIKTHELHL 278
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
++HPN+++ ++ L++V + + M + G I S L + L+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
+ H +HRD+K N+L++T G +KLADFG++ G R+ V T + APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEI 177
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-------APPGLDYD 176
L Y++ DIWS G E+ A F + L + PG+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 177 RDKK----------FSKSF-------KEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
D K FSK + +++ L D KR +A+ L H FF+ P
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M + HP +++ Y + + + +V FM G ++ E+ +G L + +
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCE 115
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL IHRD+ A N L+ N V+K++DFG++ + D Q + +T P W
Sbjct: 116 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPVKWA 172
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
+PEV S Y+SK+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 173 SPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 227
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKH 209
+ S +++ C + RP +LL+
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 89 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 146
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 207 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 266 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 320
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 321 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 194 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 248
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 305
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 306 LKTEPTQRMTITEFMNHPWI 325
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 19/223 (8%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L +VM + + G +I F E ++ + + Y
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
H HRD+K N LLD + +K+ FG S + + VGTP ++APEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYIAPEV 187
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL------LMTIQNAPPGLDYDR 177
L AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S + +++ V D KR + ++ H +F P +L
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADL 285
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 200 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 254
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 255 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 311
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 312 LKTEPTQRMTITEFMNHPWI 331
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 49/318 (15%)
Query: 1 MSLIDHPNVIRAYCSFVVDSN------LWVVMPFMAEG---SCLHLMKIAYQDGFEESAI 51
M ++ HPNV+ F + + L +V+ ++ E + H K+ + I
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL--KQTMPMLLI 143
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLD-TNGVVKLADFGVSACMFDTGDRQRSRN 110
+ + L++L Y+H G HRD+K N+LLD +GV+KL DFG SA + G+ S
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGEPNVSX- 201
Query: 111 TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNA- 169
+ + + APE++ + Y + DIWS G EL G F + L+ I+
Sbjct: 202 --ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259
Query: 170 -----------PPGLDYD----RDKKFSKSFK--------EMVAMCLVKDQTKRPTAEKL 206
P +++ R FSK F+ ++++ L + R TA +
Sbjct: 260 TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA 319
Query: 207 LKHSFFKHAKPPELSVKKLFADLPPLWNRVXXXXXXXXXXXXXXXMPSAEQEAISQSEYQ 266
L H FF + E + +LPPL+N AE E +S
Sbjct: 320 LCHPFFDELRTGEARMPN-GRELPPLFNWTKEELSVRPDLISRLVPQHAEAELLS----- 373
Query: 267 RGVSAWNFD---IEDLKA 281
RG+ NF +E LK
Sbjct: 374 RGIDVHNFQPIPLESLKV 391
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVD-SNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
M+ + H N+++ V + L++V +MA+GS + ++ + + +
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+A++YL +HRD+ A N+L+ + V K++DFG+ T + +++T W
Sbjct: 113 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL------TKEASSTQDTGKLPVKWT 166
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE L+ +++K+D+WSFGI E+ + G P+ + P V + G D
Sbjct: 167 APEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAP 221
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
+ E++ C D RP+ +L + +H K EL +
Sbjct: 222 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ--LEHIKTHELHL 263
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 47/244 (19%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG------------ 52
DHPNVIR YCS D L++ L L + QD E +
Sbjct: 67 DHPNVIRYYCSETTDRFLYI---------ALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 53 -SILKETLKALDYLHRQGHIHRDVKAGNILLDT-------------NGVVKLADFGVSAC 98
S+L++ + +LH IHRD+K NIL+ T N + ++DFG+
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 99 MFDTGDR--QRSRNTFVGTPCWMAPEVLQPGSGYNSK------ADIWSFG-ITALELAHG 149
+ D+G + + N GT W APE+L+ + +K DI+S G + L+ G
Sbjct: 178 L-DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 150 HAPFS-KYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
PF KY ++ I + + D+ ++++ + D KRPTA K+L+
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 209 HSFF 212
H F
Sbjct: 296 HPLF 299
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 47/244 (19%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG------------ 52
DHPNVIR YCS D L++ L L + QD E +
Sbjct: 67 DHPNVIRYYCSETTDRFLYI---------ALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 53 -SILKETLKALDYLHRQGHIHRDVKAGNILLDT-------------NGVVKLADFGVSAC 98
S+L++ + +LH IHRD+K NIL+ T N + ++DFG+
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 99 MFDTGDR--QRSRNTFVGTPCWMAPEVLQPGSGYNSK------ADIWSFG-ITALELAHG 149
+ D+G + + N GT W APE+L+ + +K DI+S G + L+ G
Sbjct: 178 L-DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 150 HAPFS-KYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
PF KY ++ I + + D+ ++++ + D KRPTA K+L+
Sbjct: 237 KHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 209 HSFF 212
H F
Sbjct: 296 HPLF 299
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R + ++L +VM + + G +I F E ++ + + Y
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 66 HRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
H HRD+K N LLD + +K+ FG S + + ++T VGTP ++APEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDT-VGTPAYIAPEV 187
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL------LMTIQNAPPGLDYDR 177
L AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPEL 220
S + +++ V D KR + ++ H +F P +L
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADL 285
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 150 YTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 204
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 261
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 262 LKTEPTQRMTITEFMNHPWI 281
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 22 LWVVMPFMAEGSC-LHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
L +V+ M G H+ + Q GF E+ E L+ LHR+ ++RD+K NI
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
LLD +G ++++D G+ A G + R VGT +MAPEV++ Y D W+ G
Sbjct: 318 LLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGTVGYMAPEVVK-NERYTFSPDWWALG 372
Query: 141 ITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKR 200
E+ G +PF + K+ ++ + + ++FS + + + L KD +R
Sbjct: 373 CLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 201 -----PTAEKLLKHSFFKHAKPPELSVKKLFADL--PPL 232
+A ++ +H FK +L+ K+L A + PP
Sbjct: 432 LGCRGGSAREVKEHPLFK-----KLNFKRLGAGMLEPPF 465
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKA 61
+ HPN++ + L +V FM + L K+ ++ G ++S I L + L+
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKD----LKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
+ + H+ +HRD+K N+L++++G +KLADFG++ G RS V T + AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAP 188
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+VL Y++ DIWS G E+ G F
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 42 YQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD 101
+ +G + + L + + + + H IHRD+K NIL+ +GVVKL DFG + +
Sbjct: 117 FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
Query: 102 TGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPP 158
G+ V T + APE+L Y D+W+ G E+ G F S
Sbjct: 177 PGEVYDDE---VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233
Query: 159 MKVLLMTIQNAPP-------------GLDY----------DRDKKFSKSFKEMVAMCLVK 195
+ ++M + N P G+ R K S+ ++ CL
Sbjct: 234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI 293
Query: 196 DQTKRPTAEKLLKHSFFK 213
D KRP +LL H FF+
Sbjct: 294 DPDKRPFCAELLHHDFFQ 311
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
++++H NV++ Y + ++ + + + G +I G E + +
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
+ YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++AP
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
E+L+ + D+WS GI + G P+ +
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 4 IDHPNVIRAYCSF---VVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG---SILKE 57
+ HPN++R Y S+ V V++ + L Y F+ I S ++
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLK----TYLKRFKVXKIKVLRSWCRQ 137
Query: 58 TLKALDYLHRQG--HIHRDVKAGNILLDT-NGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
LK L +LH + IHRD+K NI + G VK+ D G++ T R +G
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-----TLKRASFAKAVIG 192
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLD 174
TP + APE + Y+ D+++FG LE A P+S+ + + +
Sbjct: 193 TPEFXAPEXYE--EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS 250
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
+D K KE++ C+ +++ +R + + LL H+FF+
Sbjct: 251 FD--KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 90 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 147
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 208 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 156 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 210
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 211 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 267
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 268 LKTEPTQRMTITEFMNHPWI 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 108 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 165
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 166 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 226 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 266
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKA 61
+ HPN++ + L +V FM + L K+ ++ G ++S I L + L+
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKD----LKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
+ + H+ +HRD+K N+L++++G +KLADFG++ G RS V T + AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAP 188
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+VL Y++ DIWS G E+ G F
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMK-IAYQDGFEESAIGSILKETL 59
+S ++H N+I+ F +VM GS L L I +E I ++ +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
A+ YL + IHRD+K NI++ + +KL DFG +A + +R + TF GT +
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL----ERGKLFYTFCGTIEYC 196
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNA--PPGLDYDR 177
APEVL + ++WS G+T L PF + L T++ A PP L
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYL---- 246
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
SK +V+ L +R T EKL+
Sbjct: 247 ---VSKELMSLVSGLLQPVPERRTTLEKLV 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 82 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 139
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 140 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 200 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 240
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 154 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 208
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 209 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 265
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 266 LKTEPTQRMTITEFMNHPWI 285
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 155 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 209
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 210 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 266
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 267 LKTEPTQRMTITEFMNHPWI 286
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 148 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 202
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 259
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 260 LKTEPTQRMTITEFMNHPWI 279
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 109 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 166
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 167 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 227 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 267
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 164 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 218
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 219 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 275
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 276 LKTEPTQRMTITEFMNHPWI 295
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVD-SNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
M+ + H N+++ V + L++V +MA+GS + ++ + + +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+A++YL +HRD+ A N+L+ + V K++DFG+ T + +++T W
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL------TKEASSTQDTGKLPVKWT 353
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE L+ +++K+D+WSFGI E+ + G P+ + P V + G D
Sbjct: 354 APEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAP 408
Query: 179 KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSV 222
+ +++ C D RPT +L + +H + EL +
Sbjct: 409 DGCPPAVYDVMKNCWHLDAATRPTFLQLREQ--LEHIRTHELHL 450
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 209 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 263
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 264 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 207 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 261
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 262 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 150 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 204
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 261
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 262 LKTEPTQRMTITEFMNHPWI 281
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 22 LWVVMPFMAEGSC-LHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
L +V+ M G H+ + Q GF E+ E L+ LHR+ ++RD+K NI
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
LLD +G ++++D G+ A G + R VGT +MAPEV++ Y D W+ G
Sbjct: 318 LLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGTVGYMAPEVVK-NERYTFSPDWWALG 372
Query: 141 ITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKR 200
E+ G +PF + K+ ++ + + ++FS + + + L KD +R
Sbjct: 373 CLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 201 -----PTAEKLLKHSFFKHAKPPELSVKKLFADL--PPL 232
+A ++ +H FK +L+ K+L A + PP
Sbjct: 432 LGCRGGSAREVKEHPLFK-----KLNFKRLGAGMLEPPF 465
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 89 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 146
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 207 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 247
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 90 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 147
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 208 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 87 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 144
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 145 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 205 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 245
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 88 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 145
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 146 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 206 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 246
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+ N ++KL DFG + S T TP ++APEVL P Y+ D+WS
Sbjct: 149 YTSKRPNAILKLTDFGFA----KETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWS 203
Query: 139 FGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMC 192
G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 204 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLIRNL 260
Query: 193 LVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 261 LKTEPTQRMTITEFMNHPWI 280
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 85 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 142
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
YL + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 203 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 212 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 266
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 267 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 3 LIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKAL 62
+++H NV++ Y + ++ + + + G +I G E + + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPE 122
YLH G HRD+K N+LLD +K++DFG+ A +F +R+R N GT ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
+L+ + D+WS GI + G P+ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 43/240 (17%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG------------ 52
DHPNVIR YCS D L++ L L + QD E +
Sbjct: 85 DHPNVIRYYCSETTDRFLYI---------ALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 53 -SILKETLKALDYLHRQGHIHRDVKAGNILLDT-------------NGVVKLADFGVSAC 98
S+L++ + +LH IHRD+K NIL+ T N + ++DFG+
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 99 MFDTGDR--QRSRNTFVGTPCWMAPEVLQPGSG--YNSKADIWSFG-ITALELAHGHAPF 153
+ D+G + + N GT W APE+L+ + DI+S G + L+ G PF
Sbjct: 196 L-DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 154 S-KYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
KY ++ I + + D+ ++++ + D KRPTA K+L+H F
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL-WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
M ++HPNV+ + L V++P+M G L ++ ++ + I S +
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-SFGLQVA 134
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-W 118
+ ++YL Q +HRD+ A N +LD + VK+ADFG++ + D ++ P W
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNAP-PGLDYD 176
A E LQ + +K+D+WSFG+ E L G P+ P + Q P +Y
Sbjct: 195 TALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYC 253
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D S +++ C D RPT L+
Sbjct: 254 PD-----SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKALDYLHRQGHIH 72
+F ++L +VM M G + + +D GF+E + + L++LH++ I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 73 RDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNS 132
RD+K N+LLD +G V+++D G++ + Q + GTP +MAPE+L G Y+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLL-GEEYDF 368
Query: 133 KADIWSFGITALELAHGHAPF 153
D ++ G+T E+ PF
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+K+ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKALDYLHRQGHIH 72
+F ++L +VM M G + + +D GF+E + + L++LH++ I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 73 RDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNS 132
RD+K N+LLD +G V+++D G++ + Q + GTP +MAPE+L G Y+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLL-GEEYDF 368
Query: 133 KADIWSFGITALELAHGHAPF 153
D ++ G+T E+ PF
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKALDYLHRQGHIH 72
+F ++L +VM M G + + +D GF+E + + L++LH++ I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 73 RDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNS 132
RD+K N+LLD +G V+++D G++ + Q + GTP +MAPE+L G Y+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLL-GEEYDF 368
Query: 133 KADIWSFGITALELAHGHAPF 153
D ++ G+T E+ PF
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 43/240 (17%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG------------ 52
DHPNVIR YCS D L++ L L + QD E +
Sbjct: 85 DHPNVIRYYCSETTDRFLYI---------ALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 53 -SILKETLKALDYLHRQGHIHRDVKAGNILLDT-------------NGVVKLADFGVSAC 98
S+L++ + +LH IHRD+K NIL+ T N + ++DFG+
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 99 MFDTGDR--QRSRNTFVGTPCWMAPEVLQPGSG--YNSKADIWSFG-ITALELAHGHAPF 153
+ D+G + + N GT W APE+L+ + DI+S G + L+ G PF
Sbjct: 196 L-DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 154 S-KYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
KY ++ I + + D+ ++++ + D KRPTA K+L+H F
Sbjct: 255 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 15 SFVVDSNLWVVMPFMAEGSCLHLMKIAYQD--GFEESAIGSILKETLKALDYLHRQGHIH 72
+F ++L +VM M G + + +D GF+E + + L++LH++ I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 73 RDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNS 132
RD+K N+LLD +G V+++D G++ + Q + GTP +MAPE+L G Y+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFMAPELLL-GEEYDF 368
Query: 133 KADIWSFGITALELAHGHAPF 153
D ++ G+T E+ PF
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSN-LWVVMPFMAEGSCLHLMKIAYQDG---FEESAIGSILK 56
M+ H N++ F D + L +V +M GS L +++ DG I +
Sbjct: 84 MAKCQHENLVE-LLGFSSDGDDLCLVYVYMPNGSLLD--RLSCLDGTPPLSWHMRCKIAQ 140
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+++LH HIHRD+K+ NILLD K++DFG++ + + + VGT
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQTVMXSRIVGTT 199
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTIQNAPPG 172
+MAPE L+ K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 200 AYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 173 LDY------DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
DY D D ++ + + CL + + KRP +K+
Sbjct: 258 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +D+P ++R ++ L +VM MA G LH + ++ S + +L +
Sbjct: 64 MHQLDNPYIVRLIGVCQAEA-LMLVME-MAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + +HRD+ A N+LL K++DFG+S + +R+ W A
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 121 PEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSK 155
PE + ++S++D+WS+G+T E L++G P+ K
Sbjct: 182 PECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA-IGSILKETL----- 59
H N+I + D L+V++ + ++G+ ++ G E S I + +E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 60 --------KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
+ ++YL Q IHRD+ A N+L+ N V+++ADFG++ + + +++ N
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 220 RLPVK-WMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE--- 274
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 275 -GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSN-LWVVMPFMAEGSCLHLMKIAYQDG---FEESAIGSILK 56
M+ H N++ F D + L +V +M GS L +++ DG I +
Sbjct: 84 MAKCQHENLVE-LLGFSSDGDDLCLVYVYMPNGSLLD--RLSCLDGTPPLSWHMRCKIAQ 140
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+++LH HIHRD+K+ NILLD K++DFG++ + + VGT
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQTVMXXRIVGTT 199
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTIQNAPPG 172
+MAPE L+ K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 200 AYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 173 LDY------DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
DY D D ++ + + CL + + KRP +K+
Sbjct: 258 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 208 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 260
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 261 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 311
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 312 QETAEIHLHSLSP 324
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT-- 111
++ + L+ L Y+H G IHRD+K N+ ++ + +++ DFG++ RQ
Sbjct: 136 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA--------RQADEEMTG 187
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKY------------- 156
+V T + APE++ YN DIWS G EL G A F S Y
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGT 247
Query: 157 PPMKVLL--------MTIQNAPPGLDYDRDKKFSKS---FKEMVAMCLVKDQTKRPTAEK 205
P +VL IQ+ PP D F + +++ LV D +R +A +
Sbjct: 248 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAE 307
Query: 206 LLKHSFFKHAKPPE 219
L H++F PE
Sbjct: 308 ALAHAYFSQYHDPE 321
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +D+P ++R V + +++ MA G LH + ++ S + +L +
Sbjct: 390 MHQLDNPYIVRLIG--VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 447
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + +HR++ A N+LL K++DFG+S + +R+ W A
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 121 PEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSK 155
PE + ++S++D+WS+G+T E L++G P+ K
Sbjct: 508 PECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H G IHRD+K N+ ++ + +++ DFG++ D + + +V
Sbjct: 136 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMT--GYV 189
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKY-------------PP 158
T + APE++ YN DIWS G EL G A F S Y P
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 159 MKVLL--------MTIQNAPPGLDYDRDKKFSKS---FKEMVAMCLVKDQTKRPTAEKLL 207
+VL IQ+ PP D F + +++ LV D +R +A + L
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 309
Query: 208 KHSFFKHAKPPE 219
H++F PE
Sbjct: 310 AHAYFSQYHDPE 321
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 194 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 246
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 247 --------EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 297
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 298 QETAEIHLHSLSP 310
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 164
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 165 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 217
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 218 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 268
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 269 QETAEIHLHSLSP 281
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 105 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 164
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 165 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 217
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 218 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 268
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 269 QETAEIHLHSLSP 281
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 166 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--- 217
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 218 -------DEEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 269
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 270 QETAEIHLHSLSP 282
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 166 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 218
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 219 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 269
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 270 QETAEIHLHSLSP 282
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 194 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 246
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 247 --------EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 297
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 298 QETAEIHLHSLSP 310
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSN-LWVVMPFMAEGSCLHLMKIAYQDG---FEESAIGSILK 56
M+ H N++ F D + L +V +M GS L +++ DG I +
Sbjct: 78 MAKCQHENLVE-LLGFSSDGDDLCLVYVYMPNGSLLD--RLSCLDGTPPLSWHMRCKIAQ 134
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+++LH HIHRD+K+ NILLD K++DFG++ + + VGT
Sbjct: 135 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQXVMXXRIVGTT 193
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTIQNAPPG 172
+MAPE L+ K+DI+SFG+ LE+ G ++ ++LL
Sbjct: 194 AYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 251
Query: 173 LDY------DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
DY D D ++ + + CL + + KRP +K+
Sbjct: 252 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 161 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 213
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 214 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 264
Query: 219 E 219
+
Sbjct: 265 Q 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 166 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 218
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 219 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 269
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 270 QETAEIHLHSLSP 282
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL---KE 57
M + H +++ + + V ++++ FMA+GS L +K D + + ++ +
Sbjct: 231 MKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLK---SDEGSKQPLPKLIDFSAQ 286
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+ + ++ ++ +IHRD++A NIL+ + V K+ADFG++ R F P
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA----------RVGAKF---PI 333
Query: 118 -WMAPEVLQPGSGYNSKADIWSFGITALELA-HGHAPFSKYPPM 159
W APE + GS + K+D+WSFGI +E+ +G P YP M
Sbjct: 334 KWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIP---YPGM 373
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 193 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 245
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 246 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 296
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 297 QETAEIHLHSLSP 309
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 194 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 246
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 247 --------EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 297
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 298 QETAEIHLHSLSP 310
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 134 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 194 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 246
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 247 --------EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 297
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 298 QETAEIHLHSLSP 310
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 193 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 245
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 246 --------EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 296
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 297 QETAEIHLHSLSP 309
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 193 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 245
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 246 --------EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 296
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 297 QETAEIHLHSLSP 309
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 133 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 193 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 245
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 246 --------EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 296
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 297 QETAEIHLHSLSP 309
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L +VM + G ++ F E I+K +A+ YLH HRDVK N+L
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 82 LDT---NGVVKLADFGVSACMFDTGDRQRSRNTF---VGTPCWMAPEVLQPGSGYNSKAD 135
+ N ++KL DFG + S N+ TP ++APEVL P Y+ D
Sbjct: 148 YTSKRPNAILKLTDFGFA-------KETTSHNSLTEPCYTPYYVAPEVLGP-EKYDKSCD 199
Query: 136 IWSFGITALELAHGHAPF------SKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMV 189
+WS G+ L G+ PF + P MK + Q P ++ + S+ K ++
Sbjct: 200 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS---EVSEEVKMLI 256
Query: 190 AMCLVKDQTKRPTAEKLLKHSFF 212
L + T+R T + + H +
Sbjct: 257 RNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M +HPN+IR + ++ FM G+ +++ DG F + +L+
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL--NDGQFTVIQLVGMLRGIA 128
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + + ++ G P
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLD 174
W APE + + S +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 189 WTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD 247
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
S +++ C KD+ RP
Sbjct: 248 C------PTSLHQLMLDCWQKDRNARP 268
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 208 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--- 259
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 260 -------DEEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 311
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 312 QETAEIHLHSLSP 324
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 149 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 206
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 207 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 267 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 307
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 181 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 233
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 234 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 284
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 285 QETAEIHLHSLSP 297
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 128 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 187
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 188 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 240
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 241 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 291
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 292 QETAEIHLHSLSP 304
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 180 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 232
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 233 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 283
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 284 QETAEIHLHSLSP 296
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 180 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 232
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 233 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 283
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 284 QETAEIHLHSLSP 296
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 148 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 208 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 260
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 261 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 311
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 312 QETAEIHLHSLSP 324
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 153 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 212
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 213 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 265
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 266 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 316
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 317 QETAEIHLHSLSP 329
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 181 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 233
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 234 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 284
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 285 QETAEIHLHSLSP 297
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 199
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 200 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 252
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 253 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 304 QETAEIHLHSLSP 316
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN+++ + F + ++VM + G +I + F E+ I+++ + A+ ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFE--RIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 66 HRQGHIHRDVKAGNILL---DTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC----W 118
H G +HRD+K N+L + N +K+ DFG + + N + TPC +
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-------KPPDNQPLKTPCFTLHY 175
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
APE+L +GY+ D+WS G+ + G PF +
Sbjct: 176 AAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H G IHRD+K N+ ++ + +++ DFG++ D + + +V
Sbjct: 128 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMT--GYV 181
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKY-------------PP 158
T + APE++ YN DIWS G EL G A F S Y P
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 241
Query: 159 MKVLL--------MTIQNAPPGLDYDRDKKFSKS---FKEMVAMCLVKDQTKRPTAEKLL 207
+VL IQ+ PP D F + +++ LV D +R +A + L
Sbjct: 242 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEAL 301
Query: 208 KHSFFKHAKPPE 219
H++F PE
Sbjct: 302 AHAYFSQYHDPE 313
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 161 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 213
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 214 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 264
Query: 219 E 219
+
Sbjct: 265 Q 265
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 104 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 163
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 164 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 216
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 217 --------EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 267
Query: 219 E 219
+
Sbjct: 268 Q 268
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 90 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 147
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 208 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 91 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 148
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 209 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 249
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 88 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 145
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 146 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 206 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 246
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 161 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 213
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL + RPT E++ H + + P
Sbjct: 214 --------EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 264
Query: 219 E 219
+
Sbjct: 265 Q 265
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 90 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 147
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 208 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 95 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 152
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M+D T P WMA E
Sbjct: 153 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 213 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 253
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 47 EESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQ 106
E S I + +A+++LH +G +HRD+K NI + VVK+ DFG+ M + Q
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 107 --------RSRNTF-VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFS 154
+R+T VGT +M+PE + G+ Y+ K DI+S G+ EL + PFS
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFS 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 65/273 (23%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSC--LHLMKIAYQDGFEESAIG 52
+ ++H N+I F L ++VM M C +H+ + +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-------ELDHERMS 127
Query: 53 SILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF 112
+L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TASTNFMMTPY 183
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP-------------- 158
V T + APEV+ G GY DIWS G EL G F
Sbjct: 184 VVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 159 ----MKVLLMTIQN------APPGLDY-------------DRDKKFSKSFKEMVAMCLVK 195
M L T++N A PG+ + +RDK + +++++ LV
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 196 DQTKRPTAEKLLKHSFFK--------HAKPPEL 220
D KR + ++ L+H + A PP++
Sbjct: 303 DPDKRISVDEALRHPYITVWYDPAEAEAPPPQI 335
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M F+ GS ++ +++ + + + K
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKG 129
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 190 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
Query: 40 IAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSAC 98
I + +E S + L+A+ + H G +HRD+K NIL+D N G +KL DFG A
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP 158
+ DT F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 181 LKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-- 233
Query: 159 MKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ G + R ++ S + ++ CL RPT E++ H + + P
Sbjct: 234 --------EEIIRGQVFFR-QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLP 284
Query: 219 ELSVKKLFADLPP 231
+ + + L P
Sbjct: 285 QETAEIHLHSLSP 297
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M +HPN+IR + ++ FM G+ +++ DG F + +L+
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL--NDGQFTVIQLVGMLRGIA 126
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + + ++ G P
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQNA--PPGLD 174
W APE + + S +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 187 WTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD 245
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
S +++ C KD+ RP
Sbjct: 246 C------PTSLHQLMLDCWQKDRNARP 266
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 202 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 256
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 257 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 205 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 259
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 260 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 213 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 267
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 268 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 1 MSLIDHPNVIR---AYCSFVVDSNLWVVMPF-MAEGSCLHLMKIAYQDGFEESAIGSILK 56
+ +HPNV+R + D + V + F + + A G I +++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ L+ LD+LH +HRD+K NIL+ + G VKLADFG++ Q + + V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDPVVVTL 175
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL 146
+ APEVL S Y + D+WS G E+
Sbjct: 176 WYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M +++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G+ E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M +++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G+ E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSIL--KET 58
M+ +DH N+I+ Y +F +++ +VM ++ G L + + + + +IL K+
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE---LFDRIIDESYNLTELDTILFMKQI 196
Query: 59 LKALDYLHRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ + ++H+ +H D+K NIL +K+ DFG++ R++ + F GTP
Sbjct: 197 CEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR---RYKPREKLKVNF-GTP 252
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
++APEV+ + D+WS G+ A L G +PF + L I L+ +
Sbjct: 253 EFLAPEVVNY-DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL-NNILACRWDLEDE 310
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK-HAKPPELSVKK 224
+ S+ KE ++ L+K+++ R +A + LKH + H LS +K
Sbjct: 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQK 359
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 206 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 260
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 261 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 133
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T FV
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMVPFVV 189
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 190 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 213 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 267
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 268 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+I + ++ +M GS ++ DG F + +L+
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIG 126
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + D D + + T G P
Sbjct: 127 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED--DPEAAYTTRGGKIPIR 184
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
W APE + + S +D+WS+GI E +++G P+
Sbjct: 185 WTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 213 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 267
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 268 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
HPNV+ C S L VV+P+M G + ++ + + IG L + K +
Sbjct: 91 HPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMK 148
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WMAPE 122
+L + +HRD+ A N +LD VK+ADFG++ M D T P WMA E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 123 VLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
LQ + +K+D+WSFG+ EL AP YP + +T+
Sbjct: 209 SLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E S +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 254 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 308
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 309 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+I + ++ +M GS ++ DG F + +L+
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIG 120
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + D D + + T G P
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED--DPEAAYTTRGGKIPIR 178
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
W APE + + S +D+WS+GI E +++G P+
Sbjct: 179 WTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 4 IDHPNVIRA--YCSFV-VDSNLWVVMPF-MAEGSCLHLMKIAYQDGFEESAIGSILKETL 59
+HPNV+R C+ D + V + F + + A G I ++++ L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ LD+LH +HRD+K NIL+ + G VKLADFG++ Q + V T +
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALTPVVVTLWYR 186
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL 146
APEVL S Y + D+WS G E+
Sbjct: 187 APEVLL-QSTYATPVDMWSVGCIFAEM 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
++ + + YLH Q +IHR + A N+LLD + +VK+ DFG++ + + + R R
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
W APE L+ Y + +D+WSFG+T EL
Sbjct: 179 VFWYAPECLKECKFYYA-SDVWSFGVTLYEL 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ A+ + + + + K
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICKG 129
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 190 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 5 DHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG--SILKETLKAL 62
+HPNVIR +C+ ++ + A L + Q F + ++L++T L
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCAAT----LQEYVEQKDFAHLGLEPITLLQQTTSGL 131
Query: 63 DYLHRQGHIHRDVKAGNILL---DTNGVVK--LADFGVSACMFDTGDRQRSRNTFV-GTP 116
+LH +HRD+K NIL+ + +G +K ++DFG+ G SR + V GT
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK-KLAVGRHSFSRRSGVPGTE 190
Query: 117 CWMAPEVLQPGSGYN--SKADIWSFG-ITALELAHGHAPFSKYPPMKVLLMTIQNAPPGL 173
W+APE+L N DI+S G + ++ G PF K + I L
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGACSL 247
Query: 174 DYDRDKKFSKSF-KEMVAMCLVKDQTKRPTAEKLLKHSFF 212
D +K +E++ + D KRP+A+ +LKH FF
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT 115
++ + + YLH Q +IHR + A N+LLD + +VK+ DFG++ + + + R R
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 116 PCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
W APE L+ Y + +D+WSFG+T EL
Sbjct: 178 VFWYAPECLKECKFYYA-SDVWSFGVTLYEL 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 132
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 188
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 189 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+++LH HIHRD+K+ NILLD K++DFG++ + + + VGT + A
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQXVXXSRIVGTTAYXA 194
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTIQNAPPGLDY- 175
PE L+ K+DI+SFG+ LE+ G ++ ++LL DY
Sbjct: 195 PEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 252
Query: 176 -----DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKL 206
D D ++ + + CL + + KRP +K+
Sbjct: 253 DKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 1 MSLIDHPNVIR---AYCSFVVDSNLWVVMPF-MAEGSCLHLMKIAYQDGFEESAIGSILK 56
+ +HPNV+R + D + V + F + + A G I +++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ L+ LD+LH +HRD+K NIL+ + G VKLADFG++ Q + V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTL 175
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL 146
+ APEVL S Y + D+WS G E+
Sbjct: 176 WYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 6 HPNVIR--AYCSFVVDSNL---WVVMPFMAEGSC-LHLMKIAYQDGFEESAIGSILK--- 56
HPNVIR C + + V++PFM G +L+ + G + + ++LK
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ ++YL + +HRD+ A N +L + V +ADFG+S ++ +GD R
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIY-SGDYYRQGRIAKMPV 213
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELA-HGHAPF 153
W+A E L Y SK+D+W+FG+T E+A G P+
Sbjct: 214 KWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 29/221 (13%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
+++ HPN+I + + NL +VM F G L ++ + + + +
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP---LNRVLSGKRIPPDILVNWAVQIAR 116
Query: 61 ALDYLHRQGH---IHRDVKAGNILLD--------TNGVVKLADFGVSACMFDTGDRQRSR 109
++YLH + IHRD+K+ NIL+ +N ++K+ DFG++ R+ R
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA--------REWHR 168
Query: 110 NT---FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTI 166
T G WMAPEV++ S ++ +D+WS+G+ EL G PF + V
Sbjct: 169 TTKMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
Query: 167 QNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
N L + F +++ C D RP+ +L
Sbjct: 228 MNK---LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M H N+IR + ++ +M G+ ++ +DG F + +L+
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIA 157
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL ++HRD+ A NIL+++N V K++DFG+S + D D + + T G P
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED--DPEATYTTSGGKIPIR 215
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
W APE + + S +D+WSFGI E + +G P+
Sbjct: 216 WTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 129
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 190 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 231
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 125
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 186 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 177 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 170 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 118 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 177
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 178 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 109 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 168
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 169 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 198 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 252
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 253 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 170 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 133
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 194 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 132
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 193 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 1 MSLIDHPNVIR---AYCSFVVDSNLWVVMPF-MAEGSCLHLMKIAYQDGFEESAIGSILK 56
+ +HPNV+R + D + V + F + + A G I +++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ L+ LD+LH +HRD+K NIL+ + G VKLADFG++ Q + V T
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPVVVTL 175
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL 146
+ APEVL S Y + D+WS G E+
Sbjct: 176 WYRAPEVLL-QSTYATPVDMWSVGCIFAEM 204
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 124
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 185 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 226
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 131
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 192 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 157
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLM 164
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 218 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 258
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 191
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 192 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 191
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 192 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 130
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 191 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 232
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 126
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 187 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 120 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 179
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 180 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 20/231 (8%)
Query: 3 LIDHPNVIR--AYC--SFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG--FEESAIGSILK 56
L +HPN++R AYC W+++PF G+ + ++ G E I +L
Sbjct: 82 LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL 141
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGV--SACMFDTGDRQR-SRNTFV 113
+ L+ +H +G+ HRD+K NILL G L D G AC+ G RQ + +
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 114 GTPC---WMAPEV--LQPGSGYNSKADIWSFGITALELAHGHAPFSK-YPPMKVLLMTIQ 167
C + APE+ +Q + + D+WS G + G P+ + + + +Q
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
Query: 168 NAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
N L + + S + +++ + D +RP LL S + +PP
Sbjct: 262 NQ---LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL--SQLEALQPP 307
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 126
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 187 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGSILKETL 59
M DHPN+I + ++ +M GS ++ DG F + +L+
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIG 141
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC- 117
+ YL +HRD+ A NIL+++N V K++DFG+S + D D + + T G P
Sbjct: 142 SGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED--DPEAAYTTRGGKIPIR 199
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
W APE + + S +D+WS+GI E +++G P+
Sbjct: 200 WTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD---GFEESAIGSILKETLK 60
+ H N++R + D L +V F C +K + + + S L + LK
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L + H + +HRD+K N+L++ NG +KLADFG++ G R + V T +
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRP 169
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
P+VL Y++ D+WS G ELA+ P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M +++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D +V T + APE++ GY DIWS G E+
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H N+++ Y V+ + +V+ F L + + G E S L + L +
Sbjct: 57 LKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
Y H + +HRD+K N+L++ G +K+ADFG++ G R V T + AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDV 171
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ-----------NAPPG 172
L Y++ DIWS G E+ +G F L+ + N
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 173 LDYDRD-------------KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
YD + K +S ++++ L D +R TA++ L+H++FK
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSAC--MFDTGDRQRSRNT 111
I +E +K + YLH +G +H+D+K+ N+ D NG V + DFG+ + + G R+
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRI 193
Query: 112 FVGTPCWMAPEVLQPGS--------GYNSKADIWSFGITALELAHGHAPFSKYPPMKVLL 163
G C +APE+++ S ++ +D+++ G EL PF P ++
Sbjct: 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW 253
Query: 164 MTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
P L K +++ C +Q +RPT KL+
Sbjct: 254 QMGTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRN 110
I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 111 TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
+V T + APE++ GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H N+++ Y V+ + +V+ F L + + G E S L + L +
Sbjct: 57 LKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
Y H + +HRD+K N+L++ G +K+ADFG++ G R V T + AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDV 171
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ-----------NAPPG 172
L Y++ DIWS G E+ +G F L+ + N
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 173 LDYDRD-------------KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
YD + K +S ++++ L D +R TA++ L+H++FK
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESA--------------I 51
H N+I + D L+V++ + ++G+ ++ G E +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 52 GSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNT 111
S + + ++YL + IHRD+ A N+L+ + V+K+ADFG++ + +++ N
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAP 170
+ WMAPE L Y ++D+WSFG+ E+ G +P+ P ++ + +
Sbjct: 213 RLPVK-WMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--- 267
Query: 171 PGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
G D+ + M+ C ++RPT ++L++
Sbjct: 268 -GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 1 MSLIDHPNVIRAY-----CSFVVDSNLWVVMPFMAEGSCL--HLMKIAYQDGFEESAIGS 53
M ++HPNV+ A + ++L ++ EG L +L + G +E I +
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLD---TNGVVKLADFGVSACMFDTGDRQRSRN 110
+L + AL YLH IHRD+K NI+L + K+ D G + + D+
Sbjct: 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCT 181
Query: 111 TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
FVGT ++APE+L+ Y D WSFG A E G PF
Sbjct: 182 EFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 1 MSLIDHPNVIRAY-----CSFVVDSNLWVVMPFMAEGSCL--HLMKIAYQDGFEESAIGS 53
M ++HPNV+ A + ++L ++ EG L +L + G +E I +
Sbjct: 67 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 126
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLD---TNGVVKLADFGVSACMFDTGDRQRSRN 110
+L + AL YLH IHRD+K NI+L + K+ D G + + D+
Sbjct: 127 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCT 182
Query: 111 TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
FVGT ++APE+L+ Y D WSFG A E G PF
Sbjct: 183 EFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 144
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 205 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 246
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 144
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 205 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M +++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+ H N+++ Y V+ + +V+ F L + + G E S L + L +
Sbjct: 57 LKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
Y H + +HRD+K N+L++ G +K+ADFG++ G R + T + AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDV 171
Query: 124 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQ-----------NAPPG 172
L Y++ DIWS G E+ +G F L+ + N
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 173 LDYDRD-------------KKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
YD + K +S ++++ L D +R TA++ L+H++FK
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 109/273 (39%), Gaps = 65/273 (23%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSC--LHLMKIAYQDGFEESAIG 52
+ ++H N+I F L ++VM M C +H+ + +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-------ELDHERMS 129
Query: 53 SILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTF 112
+L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TACTNFMMTPY 185
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPP-------------- 158
V T + APEV+ G GY + DIWS G EL G F
Sbjct: 186 VVTRYYRAPEVIL-GMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 159 ----MKVLLMTIQNAP------PGLDY-------------DRDKKFSKSFKEMVAMCLVK 195
M L T++N PG+ + +RDK + +++++ LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 196 DQTKRPTAEKLLKHSFFK--------HAKPPEL 220
D KR + ++ L+H + A PP++
Sbjct: 305 DPDKRISVDEALRHPYITVWYDPAEAEAPPPQI 337
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L++ M F +G+ ++ + ++ + ++ K +DY+H + IHRD+K NI
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 82 LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGI 141
L VK+ DFG+ + + G R RS+ GT +M+PE + Y + D+++ G+
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSK----GTLRYMSPEQI-SSQDYGKEVDLYALGL 223
Query: 142 TALELAH 148
EL H
Sbjct: 224 ILAELLH 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 47 EESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQ 106
E I + +A+++LH +G +HRD+K NI + VVK+ DFG+ M + Q
Sbjct: 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 107 RSRNTF---------VGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYP 157
VGT +M+PE + G+ Y+ K DI+S G+ EL + FS
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIH-GNNYSHKVDIFSLGLILFELLYS---FSTQM 277
Query: 158 PMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKH 214
++ ++N L + +K+ + MV L T+RP A +++++ F++
Sbjct: 278 ERVRIITDVRNLKFPLLF--TQKYPQEHM-MVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 45 GFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDT---NGVVKLADFGVSACMFD 101
F E I K +A+ YLH HRDVK N+L + N ++KL DFG +
Sbjct: 157 AFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---- 212
Query: 102 TGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF------SK 155
S T TP ++APEVL P Y+ D WS G+ L G+ PF +
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAI 271
Query: 156 YPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHA 215
P K + Q P ++ + S+ K ++ L + T+R T + H + +
Sbjct: 272 SPGXKTRIRXGQYEFPNPEWS---EVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTG---YV 190
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 248
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ + +++L + IHRD+ A NILL N VVK+ DFG++ ++ D R +T +
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
WMAPE + Y++K+D+WS+G+ E+ + G +P+
Sbjct: 267 -WMAPESIF-DKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D FV
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---FV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D FV
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---FV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTG---YV 190
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 248
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ + + +F+
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------RTAGTSFMM 182
Query: 115 TP-----CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
TP + APEV+ G GY DIWS G E+ G F
Sbjct: 183 TPEVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 32/192 (16%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 212
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTIQNAPP 171
T + APE++ YN DIWS G EL G F + L +M + PP
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 172 GLDYDR-----------------DKKFSKSF-------KEMVAMCLVKDQTKRPTAEKLL 207
R + F+ F +++ LV D KR TA + L
Sbjct: 273 ASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 208 KHSFFKHAKPPE 219
H +F P+
Sbjct: 333 AHPYFSQYHDPD 344
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTG---YV 190
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 248
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTG---YV 185
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 243
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTG---YV 189
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 247
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 174
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMF-DTGDRQRSRNTFVGTPCWMAPEVLQPG 127
G +H D+K N L+ +G++KL DFG++ M DT +++ VGT +M PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT--TSVVKDSQVGTVNYMPPEAIKDM 231
Query: 128 SGYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
S D+WS G + +G PF + ++ I +D +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 178 DKKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ +F K ++++ CL +D +R + +LL H + + P
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 174
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMF-DTGDRQRSRNTFVGTPCWMAPEVLQPG 127
G +H D+K N L+ +G++KL DFG++ M DT +++ VGT +M PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT--TSVVKDSQVGTVNYMPPEAIKDM 231
Query: 128 SGYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
S D+WS G + +G PF + ++ I +D +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 178 DKKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ +F K ++++ CL +D +R + +LL H + + P
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 126
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHRD+ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 187 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 132
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 188
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 189 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG---YV 206
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 264
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 325 ALAHAYFAQYHDPD 338
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 130
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 186
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 187 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 132
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 188
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 189 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C + Q + + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHERMSYL 169
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 225
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 226 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C + Q + + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHERMSYL 169
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 225
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 226 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 125
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 181
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 182 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 195
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 253
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 195
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 253
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D FV
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---FV 179
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 237
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 125
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 181
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 182 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 124
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 180
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 181 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 195
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 253
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 314 ALAHAYFAQYHDPD 327
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M + Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ G F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M C Q + + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 185
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 243
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD--TGDRQRSRNT 111
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D TG
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG-------- 181
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQN 168
+V T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV-- 239
Query: 169 APPG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTA 203
PG + + + + +S +M M LV D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 204 EKLLKHSFFKHAKPPE 219
+ L H++F P+
Sbjct: 300 AQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD---GFEESAIGSILKETLK 60
+ H N++R + D L +V F C +K + + + S L + LK
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
L + H + +HRD+K N+L++ NG +KLA+FG++ G R + V T +
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRP 169
Query: 121 PEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
P+VL Y++ D+WS G ELA+ P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG---YV 194
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 252
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 313 ALAHAYFAQYHDPD 326
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 190
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 248
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 309 ALAHAYFAQYHDPD 322
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG+ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 189
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 247
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 146
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGS 128
G +H D+K N L+ +G++KL DFG++ M +++ VGT +M PE ++ S
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 129 GYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
D+WS G + +G PF + ++ I +D + +
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNHE 258
Query: 179 KKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+F K ++++ CL +D +R + +LL H + + P
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG---YV 188
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 246
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D V T + APE++ GY DIWS G E+
Sbjct: 176 RVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+LL+T +K+ DFG++
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D V T + APE++ GY DIWS G E+
Sbjct: 177 RVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTG---YV 188
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 246
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 194
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 252
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 313 ALAHAYFAQYHDPD 326
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 188
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 246
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 182
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 240
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 241 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 300
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 301 ALAHAYFAQYHDPD 314
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 185
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 243
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 185
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 243
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 304 ALAHAYFAQYHDPD 317
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 4 IDHPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
+ H N+++ C NL ++M ++ GS ++ +++ + + + K
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKG 127
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
++YL + +IHR++ NIL++ VK+ DFG++ + + + + W AP
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 165
E L S ++ +D+WSFG+ EL + SK PP + + M
Sbjct: 188 ESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRMI 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 193
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 251
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 252 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 311
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 312 ALAHAYFAQYHDPD 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 71 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 127
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGS 128
G +H D+K N L+ +G++KL DFG++ M +++ VGT +M PE ++ S
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 129 GYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
D+WS G + +G PF + ++ I +D + +
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNHE 239
Query: 179 KKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+F K ++++ CL +D +R + +LL H + + P
Sbjct: 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 283
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 206
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 264
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 325 ALAHAYFAQYHDPD 338
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 74 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 130
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGS 128
G +H D+K N L+ +G++KL DFG++ M +++ VGT +M PE ++ S
Sbjct: 131 GIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 129 GYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
D+WS G + +G PF + ++ I +D + +
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNHE 242
Query: 179 KKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+F K ++++ CL +D +R + +LL H + + P
Sbjct: 243 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 286
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 146
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGS 128
G +H D+K N L+ +G++KL DFG++ M +++ VGT +M PE ++ S
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 129 GYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
D+WS G + +G PF + ++ I +D + +
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNHE 258
Query: 179 KKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+F K ++++ CL +D +R + +LL H + + P
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 203
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 261
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 262 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 202
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 260
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 261 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 321 ALAHAYFAQYHDPD 334
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 188
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 246
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 307 ALAHAYFAQYHDPD 320
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 202
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 260
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 261 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 321 ALAHAYFAQYHDPD 334
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 203
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 261
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 262 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 7 PNVIRAYCSFVVDSNLWV--VMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
P ++ Y + V WV M + GS L+K Q E L + L+ L+Y
Sbjct: 145 PRIVPLYGA--VREGPWVNIFMELLEGGSLGQLVK--EQGCLPEDRALYYLGQALEGLEY 200
Query: 65 LHRQGHIHRDVKAGNILLDTNGV-VKLADFGVSACMF--DTGDRQRSRNTFVGTPCWMAP 121
LH + +H DVKA N+LL ++G L DFG + C+ G + + GT MAP
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
EV+ G ++K D+WS L + +G P++++ + L PP
Sbjct: 261 EVVL-GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPP 309
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + +HRD+ A N+L+ VVK+ DFG++ + + N + WM
Sbjct: 183 KGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-WM 241
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
APE L G Y K+D+WS+GI E+ + G P+ P IQN + D
Sbjct: 242 APESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG-----FKMD 295
Query: 179 KKFSKSFKEMVAM--CLVKDQTKRPT 202
+ F + + + M C D KRP+
Sbjct: 296 QPFYATEEIYIIMQSCWAFDSRKRPS 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 180
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 238
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 239 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 299 ALAHAYFAQYHDPD 312
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 136
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 192
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELA 147
T + APEV+ G GY D+WS G E+
Sbjct: 193 TRYYRAPEVIL-GMGYKENVDLWSVGCIMGEMV 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 189
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 247
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 181
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 239
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 240 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 299
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 300 ALAHAYFAQYHDPD 313
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 70 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 126
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGS 128
G +H D+K N L+ +G++KL DFG++ M +++ VGT +M PE ++ S
Sbjct: 127 GIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 129 GYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRD 178
D+WS G + +G PF + ++ I +D + +
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNHE 238
Query: 179 KKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+F K ++++ CL +D +R + +LL H + + P
Sbjct: 239 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 282
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 180
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 238
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 239 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 299 ALAHAYFAQYHDPD 312
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 179
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 237
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 238 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 125
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVV 181
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELA 147
T + APEV+ G GY D+WS G E+
Sbjct: 182 TRYYRAPEVIL-GMGYKENVDLWSVGCIMGEMV 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 189
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 247
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 248 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 308 ALAHAYFAQYHDPD 321
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 37 LMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVS 96
L K+ I L + L+ L Y+H +HRD+K N+L++T +K+ DFG++
Sbjct: 132 LYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Query: 97 ACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
D V T + APE++ GY DIWS G E+
Sbjct: 192 RIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 179
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 237
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WM 213
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 214 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 254
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK 215
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 216 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 256
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 257 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 268 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 308
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 309 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 266 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 306
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 307 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 216 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 256
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 257 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D +V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTG---YV 179
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 237
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 298 ALAHAYFAQYHDPD 311
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 161 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WM 219
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 220 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 260
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 261 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 204 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WM 262
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 263 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 303
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 304 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 7 PNVIRAYCSFVVDSNLWV--VMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDY 64
P ++ Y + V WV M + GS L+K Q E L + L+ L+Y
Sbjct: 126 PRIVPLYGA--VREGPWVNIFMELLEGGSLGQLVK--EQGCLPEDRALYYLGQALEGLEY 181
Query: 65 LHRQGHIHRDVKAGNILLDTNGV-VKLADFGVSACMF--DTGDRQRSRNTFVGTPCWMAP 121
LH + +H DVKA N+LL ++G L DFG + C+ G + + GT MAP
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
EV+ G ++K D+WS L + +G P++++ + L PP
Sbjct: 242 EVVL-GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPP 290
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 9/229 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 69 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
PE L+ + ++ +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 242
Query: 180 KFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSVKKLFAD 228
+ ++ C RPT L F A+P ++ + F +
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMRALQDFEE 289
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 196 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WM 254
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 255 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 295
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 296 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFE--ESAIGSILKET 58
+++ H N++ + SF L ++ F+ S L + + FE E I S + +
Sbjct: 55 LNIARHRNILHLHESFESMEELVMIFEFI---SGLDIFERINTSAFELNEREIVSYVHQV 111
Query: 59 LKALDYLHRQGHIHRDVKAGNILLDT--NGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+AL +LH H D++ NI+ T + +K+ +FG A GD R T P
Sbjct: 112 CEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFT---AP 167
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
+ APEV Q ++ D+WS G L G PF +++ I NA D +
Sbjct: 168 EYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQII-ENIMNAEYTFDEE 225
Query: 177 RDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
K+ S + V LVK++ R TA + L+H + K
Sbjct: 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 46 FEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR 105
F S I +++ L L Y+HR +HRD+KA N+L+ +GV+KLADFG++ +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 106 QRSR-NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
Q +R V T + PE+L Y D+W G E+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK-WM 213
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 214 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 254
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + + WM
Sbjct: 202 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-WM 260
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 261 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 301
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 302 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ D+G++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 75 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 132
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 193 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTG------- 103
I + +TL+A+ LH IHRD+K N+L+++N +K+ DFG++ + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 104 DRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKV 161
+Q FV T + APEV+ + Y+ D+WS G EL F Y +
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 162 LLMTIQNAPPG------LDYDRDKKFSKSFK-------------------EMVAMCLVKD 196
L+ I P ++ R +++ KS +++ LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 197 QTKRPTAEKLLKHSFFKHAKPP 218
KR TA++ L+H + + P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDP 315
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 207 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 247
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 248 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 207 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 247
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 248 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 425 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 480
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 481 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQ----NAPPGLD 174
APE + ++SK+D+WSFG+ E ++G P+ +V M + P G
Sbjct: 541 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC- 598
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
+ +++ +C D RP
Sbjct: 599 -------PREMYDLMNLCWTYDVENRP 618
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 424 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 479
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 480 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTIQ----NAPPGLD 174
APE + ++SK+D+WSFG+ E ++G P+ +V M + P G
Sbjct: 540 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC- 597
Query: 175 YDRDKKFSKSFKEMVAMCLVKDQTKRP 201
+ +++ +C D RP
Sbjct: 598 -------PREMYDLMNLCWTYDVENRP 617
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 75 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 132
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 193 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 27/225 (12%)
Query: 9 VIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQ 68
+IR Y + D +++VM L K D +E S K L+A+ +H+
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIHQH 174
Query: 69 GHIHRDVKAGNILLDTNGVVKLADFGVSACMF-DTGDRQRSRNTFVGTPCWMAPEVLQPG 127
G +H D+K N L+ +G++KL DFG++ M DT +++ VG +M PE ++
Sbjct: 175 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT--TSVVKDSQVGAVNYMPPEAIKDM 231
Query: 128 SGYNSKA----------DIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
S D+WS G + +G PF + ++ I +D +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ------IINQISKLHAIIDPNH 285
Query: 178 DKKF----SKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPP 218
+ +F K ++++ CL +D +R + +LL H + + P
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R +++VM + G L ++ + ++ + ++YL
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGT------PC-W 118
+ IHRD+ A N L+ V+K++DFG+S R+ + + + P W
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNVLKISDFGMS--------REEADGVYAASGGLRQVPVKW 281
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE L G Y+S++D+WSFGI E + G +P+
Sbjct: 282 TAPEALNYGR-YSSESDVWSFGILLWETFSLGASPY 316
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 2 SLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKA 61
++++ NV+RA D ++++V +M L + + E ++ + +K
Sbjct: 70 NIVNLLNVLRADN----DRDVYLVFDYMETD----LHAVIRANILEPVHKQYVVYQLIKV 121
Query: 62 LDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDT------------------G 103
+ YLH G +HRD+K NILL+ VK+ADFG+S +
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 104 DRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
D Q +V T + APE+L + Y D+WS G E+ G F
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 46 FEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR 105
F S I +++ L L Y+HR +HRD+KA N+L+ +GV+KLADFG++ +
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 106 QRSR-NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
Q +R V T + PE+L Y D+W G E+
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M + Q + + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 69 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 126
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 187 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTG------- 103
I + +TL+A+ LH IHRD+K N+L+++N +K+ DFG++ + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 104 DRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKV 161
+Q +V T + APEV+ + Y+ D+WS G EL F Y +
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 162 LLMTIQNAPPG------LDYDRDKKFSKSFK-------------------EMVAMCLVKD 196
L+ I P ++ R +++ KS +++ LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 197 QTKRPTAEKLLKHSFFKHAKPP 218
KR TA++ L+H + + P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDP 315
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 82 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 137
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 198 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 82 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 137
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 198 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETL 59
MS ++HPN+++ Y ++ + +VM F+ G H L+ A+ + S ++ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 60 KALDYLHRQGH--IHRDVKAGNILL---DTNGVV--KLADFGVSACMFDTGDRQRSRNTF 112
++Y+ Q +HRD+++ NI L D N V K+ADFG+S S +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGL 186
Query: 113 VGTPCWMAPEVL-QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
+G WMAPE + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-E 245
Query: 172 GLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
GL + + ++ +C D KRP ++K
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 46 FEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR 105
F S I +++ L L Y+HR +HRD+KA N+L+ +GV+KLADFG++ +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 106 QRSR-NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
Q +R V T + PE+L Y D+W G E+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M + Q + + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 46 FEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR 105
F S I +++ L L Y+HR +HRD+KA N+L+ +GV+KLADFG++ +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 106 QRSR-NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
Q +R V T + PE+L Y D+W G E+
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD---GFEESAIGSILKE 57
M + H N++R Y ++ L +V FM ++ + G E + + +
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 58 TLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
L+ L + H +HRD+K N+L++ G +KL DFG++ G + ++ V T
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLW 173
Query: 118 WMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ AP+VL Y++ DIWS G E+ G F
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DH N+IR Y V+ + +V GS L ++ +Q F + + +
Sbjct: 65 MHSLDHRNLIRLY-GVVLTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAE 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
+ YL + IHRD+ A N+LL T +VK+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
PE L+ + ++ +D W FG+T E+ +G P+
Sbjct: 183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 7 PNVIRAYCSFVVDSNLWV--VMPFMAEGSCLHLMKIAYQDGF--EESAIGSILKETLKAL 62
P ++ Y + V WV M + GS L+K Q G E+ A+ L + L+ L
Sbjct: 126 PRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRAL-YYLGQALEGL 179
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGV-VKLADFGVSACMF--DTGDRQRSRNTFVGTPCWM 119
+YLH + +H DVKA N+LL ++G L DFG + C+ G + + GT M
Sbjct: 180 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 239
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
APEV+ G ++K DIWS L + +G P+++Y
Sbjct: 240 APEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M + Q + + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYL 124
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVV 180
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 181 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 80 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 135
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 136 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 196 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETL 59
MS ++HPN+++ Y ++ + +VM F+ G H L+ A+ + S ++ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 60 KALDYLHRQGH--IHRDVKAGNILL---DTNGVV--KLADFGVSACMFDTGDRQRSRNTF 112
++Y+ Q +HRD+++ NI L D N V K+ADFG S S +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGL 186
Query: 113 VGTPCWMAPEVL-QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
+G WMAPE + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-E 245
Query: 172 GLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
GL + + ++ +C D KRP ++K
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYL 65
HPN++R +++VM + G L ++ + ++ + ++YL
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYL 229
Query: 66 HRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD------TGDRQRSRNTFVGTPC-W 118
+ IHRD+ A N L+ V+K++DFG+S D G RQ P W
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQ--------VPVKW 281
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE L G Y+S++D+WSFGI E + G +P+
Sbjct: 282 TAPEALNYGR-YSSESDVWSFGILLWETFSLGASPY 316
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 22 LWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNIL 81
L++ M F +G+ ++ + ++ + ++ K +DY+H + I+RD+K NI
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 82 LDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGI 141
L VK+ DFG+ + + G R RS+ GT +M+PE + Y + D+++ G+
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSK----GTLRYMSPEQISS-QDYGKEVDLYALGL 209
Query: 142 TALELAH 148
EL H
Sbjct: 210 ILAELLH 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 7 PNVIRAYCSFVVDSNLWV--VMPFMAEGSCLHLMKIAYQDGF--EESAIGSILKETLKAL 62
P ++ Y + V WV M + GS L+K Q G E+ A+ L + L+ L
Sbjct: 110 PRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRAL-YYLGQALEGL 163
Query: 63 DYLHRQGHIHRDVKAGNILLDTNGV-VKLADFGVSACMF--DTGDRQRSRNTFVGTPCWM 119
+YLH + +H DVKA N+LL ++G L DFG + C+ G + + GT M
Sbjct: 164 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
APEV+ G ++K DIWS L + +G P+++Y
Sbjct: 224 APEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 4 IDHPNVIRAYCSFVVDSNLWV--VMPFMAEGSCLHLMKIAYQDGF--EESAIGSILKETL 59
+ P ++ Y + V WV M + GS L+K Q G E+ A+ L + L
Sbjct: 121 LSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRAL-YYLGQAL 174
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGV-VKLADFGVSACMF--DTGDRQRSRNTFVGTP 116
+ L+YLH + +H DVKA N+LL ++G L DFG + C+ G + + GT
Sbjct: 175 EGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 234
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKY 156
MAPEV+ G ++K DIWS L + +G P+++Y
Sbjct: 235 THMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGX---V 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 72 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 127
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 128 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 188 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ T D V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGX---V 203
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 261
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 262 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 322 ALAHAYFAQYHDPD 335
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 66 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 121
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 182 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DH +++R S+L +V ++ GS L ++ ++ + + + K +
Sbjct: 90 LDHAHIVR-LLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMY 147
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YL G +HR++ A N+LL + V++ADFGV A + D+Q + WMA E
Sbjct: 148 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 124 LQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFS 182
+ G Y ++D+WS+G+T EL G P++ + + P L+
Sbjct: 207 IHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLLEKGERLAQP 257
Query: 183 KSFKEMVAMCLVK----DQTKRPTAEKLLKHSFFKHAK-PPELSVKK 224
+ V M +VK D+ RPT ++ L + F + A+ PP V K
Sbjct: 258 QICTIDVYMVMVKCWMIDENIRPTFKE-LANEFTRMARDPPRYLVIK 303
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 66 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 121
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 182 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELA 147
T + APEV+ G GY DIWS G E+
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-W 118
+ +DYL ++ IHRD+ A NIL+ N V K+ADFG+S G + T P W
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVRW 197
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
MA E L S Y + +D+WS+G+ E+ G P+ ++ + P G ++
Sbjct: 198 MAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY----EKLPQGYRLEK 252
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+++ C + +RP+ ++L
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 60 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 115
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 116 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 176 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ + D R + + WM
Sbjct: 159 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WM 217
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 218 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 258
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M+ + HP +I + +F + +++ F++ G +IA +D E+ + + +++
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD--RIAAEDYKMSEAEVINYMRQAC 159
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGV--VKLADFGVSACMFDTGDRQRSRNTFVGTPC 117
+ L ++H +H D+K NI+ +T VK+ DFG++ + + T
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPDEIVKVTTATAE 215
Query: 118 WMAPEVL--QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
+ APE++ +P Y D+W+ G+ L G +PF+ ++ L ++ D
Sbjct: 216 FAAPEIVDREPVGFYT---DMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVKRCDWEFDE 271
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFK 213
D S K+ + L K+ KR T L+H + K
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQD-GFEESAIGSILKETL 59
M +D+P ++R + ++ W+++ MAE L+ K Q+ ++ I ++ +
Sbjct: 62 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVS 117
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ YL +HRD+ A N+LL T K++DFG+S + + +++ W
Sbjct: 118 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 120 APEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
APE + ++SK+D+WSFG+ E ++G P+
Sbjct: 178 APECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 75 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 132
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 189
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 190 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-W 118
+ +DYL ++ IHRD+ A NIL+ N V K+ADFG+S G + T P W
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVRW 207
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
MA E L S Y + +D+WS+G+ E+ G P+ ++ + P G ++
Sbjct: 208 MAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY----EKLPQGYRLEK 262
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+++ C + +RP+ ++L
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 74 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 131
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 73 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 78 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 72 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAK 129
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 186
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 187 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 72 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 129
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 186
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 187 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 18 VDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLH------RQGH- 70
VD +LW++ F +GS +K E I + + L YLH + GH
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMA---RGLAYLHEDIPGLKDGHK 149
Query: 71 ---IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPG 127
HRD+K+ N+LL N +ADFG+ A F+ G + VGT +MAPEVL+
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 128 SGYNSKA----DIWSFGITALELA 147
+ A D+++ G+ ELA
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 3 LIDHPNVIRAYCSFV--------VDSNLWVVMPFMAEGSCLHLMKIAYQDG-FEESAIGS 53
L HPN+++ +CS ++++ + +G + +K G +
Sbjct: 82 LSGHPNIVQ-FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 54 ILKETLKALDYLHRQG--HIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR----QR 107
I +T +A+ ++HRQ IHRD+K N+LL G +KL DFG + + D QR
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 108 --------SRNTFVGTPCWMAPEVLQPGSGY--NSKADIWSFGITALELAHGHAPFSKYP 157
+RNT TP + PE++ S + K DIW+ G L PF
Sbjct: 201 RALVEEEITRNT---TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
Query: 158 PMKVL 162
++++
Sbjct: 258 KLRIV 262
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ FG++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F L ++VM M + Q + + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T +V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----TAGTSFMMTPYVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + APEV+ G GY DIWS G E+ F
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ + D R + + WM
Sbjct: 159 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WM 217
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 218 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 258
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ + D R + + WM
Sbjct: 159 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WM 217
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 218 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 258
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+DH +++R S+L +V ++ GS L ++ ++ + + + K +
Sbjct: 72 LDHAHIVR-LLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMY 129
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEV 123
YL G +HR++ A N+LL + V++ADFGV A + D+Q + WMA E
Sbjct: 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 124 LQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFS 182
+ G Y ++D+WS+G+T EL G P++ + + P L+
Sbjct: 189 IHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLLEKGERLAQP 239
Query: 183 KSFKEMVAMCLVK----DQTKRPTAEKLLKHSFFKHAK-PPELSVKK 224
+ V M +VK D+ RPT ++ L + F + A+ PP V K
Sbjct: 240 QICTIDVYMVMVKCWMIDENIRPTFKE-LANEFTRMARDPPRYLVIK 285
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 36/169 (21%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K +++L + IHRD+ A NILL VVK+ DFG++ + D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYD 176
WMAPE + Y ++D+WSFG+ E+ A S YP +K+
Sbjct: 207 -WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI--------------- 247
Query: 177 RDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
D++F + KE M C + ++RPT +L++H
Sbjct: 248 -DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
K +++L + IHRD+ A NILL VVK+ DFG++ + D R + + WM
Sbjct: 150 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WM 208
Query: 120 APEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDK 179
APE + Y ++D+WSFG+ E+ A S YP +K+ D+
Sbjct: 209 APETIF-DRVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKI----------------DE 249
Query: 180 KFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLKH 209
+F + KE M C + ++RPT +L++H
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ DF ++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ L YLH + IHRDVK+ NILLD N V K+ DFG+S + G + GT ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG-QTHLXXVVKGTLGYI 208
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL 146
PE G K+D++SFG+ E+
Sbjct: 209 DPEYFIKGR-LTEKSDVYSFGVVLFEV 234
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWM 119
+ L YLH + IHRDVK+ NILLD N V K+ DFG+S + D+ GT ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL-DQTHLXXVVKGTLGYI 208
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL 146
PE G K+D++SFG+ E+
Sbjct: 209 DPEYFIKGR-LTEKSDVYSFGVVLFEV 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
L + L+ L Y HRQ +HRD+K N+L++ G +KLADFG++ ++ + V
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEV 161
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T + P++L + Y+++ D+W G E+A G F
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNL------WVVMPFMAEGSCLHLMKIAYQDGFEESAIGSI 54
M ++H N+I F +L ++VM M C Q + + +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ-----VIQMELDHERMSYL 131
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
L + L + +LH G IHRD+K NI++ ++ +K+ DFG++ T V
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMEPEVV 187
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELA 147
T + APEV+ G GY D+WS G E+
Sbjct: 188 TRYYRAPEVIL-GMGYKENVDLWSVGCIMGEMV 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTG------- 103
I + +TL+A+ LH IHRD+K N+L+++N +K+ DFG++ + ++
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 104 DRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF--SKYPPMKV 161
+Q V T + APEV+ + Y+ D+WS G EL F Y +
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 162 LLMTIQNAPPG------LDYDRDKKFSKSFK-------------------EMVAMCLVKD 196
L+ I P ++ R +++ KS +++ LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 197 QTKRPTAEKLLKHSFFKHAKPP 218
KR TA++ L+H + + P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDP 315
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 204
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 205 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 259
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 204
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 205 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 259
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGS---CLHLMKIAYQDGFEESAIGSILKE 57
+S+ H N++R + + +V P+MA GS CL + Q + I
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALG 147
Query: 58 TLKALDYLHRQGH---IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
+ + L YLH IHRDVKA NILLD + DFG++ M D D G
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXH-VXXAVRG 205
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
T +APE L G + K D++ +G+ LEL G F
Sbjct: 206 TIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAF 243
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 195
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 196 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 250
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 251 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 198
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 199 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 253
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 254 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLM-----KIAYQDGFEESAIGSILKET 58
H N+++ C+ + + ++M F+ GS + KI + + + +
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV------QI 135
Query: 59 LKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
K +DYL + ++HRD+ A N+L+++ VK+ DFG++ + + ++ W
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL 146
APE L Y + +D+WSFG+T EL
Sbjct: 196 YAPECLMQSKFYIA-SDVWSFGVTLHEL 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 197
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 198 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 252
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 253 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 191
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 192 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 246
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 247 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +DHP+++R + + +V M G L + ++D + + + K
Sbjct: 71 MASMDHPHLVRL-LGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL + +HRD+ A N+L+ + VK+ DFG++ + GD + P WM
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWM 186
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
A E + + ++D+WS+G+T EL G P+ P
Sbjct: 187 ALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 197
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 198 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 252
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 253 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 36/194 (18%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFV 113
++ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ T D +V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTG---YV 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTIQNAP 170
T + APE++ YN DIWS G EL G F +K++L +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV--GT 241
Query: 171 PG------LDYDRDKKFSKSFKEMVAM-------------------CLVKDQTKRPTAEK 205
PG + + + + +S +M M LV D KR TA +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 206 LLKHSFFKHAKPPE 219
L H++F P+
Sbjct: 302 ALAHAYFAQYHDPD 315
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +DHP+++R + + +V M G L + ++D + + + K
Sbjct: 94 MASMDHPHLVRLL-GVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAK 151
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-WM 119
+ YL + +HRD+ A N+L+ + VK+ DFG++ + GD + P WM
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWM 209
Query: 120 APEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
A E + + ++D+WS+G+T EL G P+ P
Sbjct: 210 ALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 194
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 195 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 249
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 250 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 73 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 73 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 6 HPNVIR--AYCSFVVDSNLWVVMPFMAEGSCLHLM-----KIAYQDGFEESAIGSILKET 58
H N+++ C+ + + ++M F+ GS + KI + + + +
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV------QI 123
Query: 59 LKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCW 118
K +DYL + ++HRD+ A N+L+++ VK+ DFG++ + + ++ W
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL 146
APE L Y + +D+WSFG+T EL
Sbjct: 184 YAPECLMQSKFYIA-SDVWSFGVTLHEL 210
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 211
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 271
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 272 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 331
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 332 SFFDELRDPNVKLPN-GRDTPALFN 355
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 226
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 227 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 281
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 282 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++M M G L ++ ++D + + + K
Sbjct: 75 MASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 132
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 189
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 190 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 188
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 248
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 249 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 308
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 309 SFFDELRDPNVKLPN-GRDTPALFN 332
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 262
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 263 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 322
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 323 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 382
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 383 SFFDELRDPNVKLPN-GRDTPALFN 406
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 217
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 277
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 338 SFFDELRDPNVKLPN-GRDTPALFN 361
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 60 KALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPC-W 118
+ +DYL ++ IHR++ A NIL+ N V K+ADFG+S G + T P W
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVRW 204
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDYDR 177
MA E L S Y + +D+WS+G+ E+ G P+ ++ + P G ++
Sbjct: 205 MAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY----EKLPQGYRLEK 259
Query: 178 DKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
+++ C + +RP+ ++L
Sbjct: 260 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 221
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 281
Query: 173 LDYDRD---------------KKFSKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ ++K F+ E +A+C L T R T + H
Sbjct: 282 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 341
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 342 SFFDELRDPNVKLPN-GRDTPALFN 365
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLH-LMKIAYQDGFEESAIGSILKETL 59
MS ++HPN+++ Y ++ + +VM F+ G H L+ A+ + S ++ +
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 60 KALDYLHRQGH--IHRDVKAGNILL---DTNGVV--KLADFGVSACMFDTGDRQRSRNTF 112
++Y+ Q +HRD+++ NI L D N V K+ADF +S S +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGL 186
Query: 113 VGTPCWMAPEVL-QPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPP 171
+G WMAPE + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-E 245
Query: 172 GLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 208
GL + + ++ +C D KRP ++K
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 219
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 279
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 280 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 339
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 340 SFFDELRDPNVKLPN-GRDTPALFN 363
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 105 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 162
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 219
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 220 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG + + R +++
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYI 196
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 197 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 81 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 138
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 195
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 196 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 4 IDHPNVIRAYCSFV--VDSNLWVVMPFMAEGSCLHLMKIAYQDG-------FEESAIGSI 54
+ HPNVI F+ D +W++ + AE H++K + S+
Sbjct: 75 LKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILL----DTNGVVKLADFGVSACMFDTGDRQRSRN 110
L + L + YLH +HRD+K NIL+ G VK+AD G + +
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 111 TFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
V T + APE+L Y DIW+ G EL
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS---YI 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 21 NLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
+L +VM ++ G CL ++ + S + + K ++YL + +HRD+ A NI
Sbjct: 87 SLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 145
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
L+++ VK+ADFG++ + D R W APE L + ++ ++D+WSFG
Sbjct: 146 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFG 204
Query: 141 ITALEL 146
+ EL
Sbjct: 205 VVLYEL 210
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS---YI 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS---YI 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 96 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 153
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 210
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 211 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 21 NLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
L +VM ++ G CL ++ + S + + K ++YL + +HRD+ A NI
Sbjct: 84 ELRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 142
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
L+++ VK+ADFG++ + D R W APE L + ++ ++D+WSFG
Sbjct: 143 LVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFG 201
Query: 141 ITALEL 146
+ EL
Sbjct: 202 VVLYEL 207
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N + + VK+ DFG++ +++T D R +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 191
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 192 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 246
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 247 DKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 74 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 131
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 196
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 252 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL--HPSFPEVS 298
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 78 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 74 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 131
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 73 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 21 NLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
+L +VM ++ G CL ++ + S + + K ++YL + +HRD+ A NI
Sbjct: 88 SLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 146
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
L+++ VK+ADFG++ + D R W APE L + ++ ++D+WSFG
Sbjct: 147 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFG 205
Query: 141 ITALEL 146
+ EL
Sbjct: 206 VVLYEL 211
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 195
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 196 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 250
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 251 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL--HPSFPEVS 297
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 77 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 134
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 191
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 192 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 74 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 131
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ + +T D R +
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPV 189
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 190 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 244
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT 202
D+ E++ MC + RP+
Sbjct: 245 DKPDNCPDMLLELMRMCWQYNPKMRPS 271
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 78 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 21 NLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNI 80
+L +VM ++ G CL ++ + S + + K ++YL + +HRD+ A NI
Sbjct: 100 SLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 158
Query: 81 LLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
L+++ VK+ADFG++ + D R W APE L + ++ ++D+WSFG
Sbjct: 159 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFG 217
Query: 141 ITALEL 146
+ EL
Sbjct: 218 VVLYEL 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ-----------------DGF 46
++HP+VI+ Y + D L +++ + GS ++ + + D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 47 EESAIG-----SILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD 101
+E A+ S + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 102 TGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMK 160
D R+ WMA E L Y +++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 161 V--LLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPT 202
+ LL T G +R S+ ++ C ++ KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ +HRD+ A N ++ + VK+ DFG++ + +T D R +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPV 198
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WM+PE L+ G + + +D+WSFG+ E+A P+ +VL ++ GL
Sbjct: 199 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-L 253
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLL 207
D+ E++ MC + RP+ +++
Sbjct: 254 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ +++T ++ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 198 -WMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 252 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL--HPSFPEVS 298
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 65 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 122
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 179
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 180 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ--DGFEESAIGSILKETLKALD 63
H +V+R + ++ D ++ + + GS + Y+ F+E+ + +L + + L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLA-------DFGVSACMFDTGD-----RQRSRNT 111
Y+H +H D+K NI + + A D+ + MF GD R S
Sbjct: 126 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 185
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTIQ 167
G ++A EVLQ + KADI++ +T + A G P ++ ++ Q
Sbjct: 186 EEGDSRFLANEVLQENYTHLPKADIFALALTVVXAA-GAEPLPRNGDQWHEIR------Q 238
Query: 168 NAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
P + + S+ F E++ + + D +RP+A L+KHS
Sbjct: 239 GRLPRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 279
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 24 VVMPFMAEGSCLHLMKIAYQDG-----FEESAIGSILKETLKALDYLHRQGHIHRDVKAG 78
V++PFM G LH +A + G + + + ++YL + IHRD+ A
Sbjct: 108 VILPFMKHGD-LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166
Query: 79 NILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
N +L + V +ADFG+S ++ +GD R W+A E L + Y +D+W+
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIY-SGDYYRQGCASKLPVKWLALESL-ADNLYTVHSDVWA 224
Query: 139 FGITALEL-AHGHAPFS 154
FG+T E+ G P++
Sbjct: 225 FGVTMWEIMTRGQTPYA 241
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 24/206 (11%)
Query: 6 HPNVIRAYCSFVVDSNLWVVM--PFMAEGSCLHLMKIAYQDG-FEESAIGSILKETLKAL 62
HP VIR F +V+ P A+ L + G E + + A+
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQ----DLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 63 DYLHRQGHIHRDVKAGNILLDT-NGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAP 121
+ H +G +HRD+K NIL+D G KL DFG A + D F GT + P
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-----EPYTDFDGTRVYSPP 207
Query: 122 EVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKF 181
E + + A +WS GI ++ G PF + + +L + P
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERD---QEILEAELHFP--------AHV 256
Query: 182 SKSFKEMVAMCLVKDQTKRPTAEKLL 207
S ++ CL + RP+ E++L
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ--DGFEESAIGSILKETLKALD 63
H +V+R + ++ D ++ + + GS + Y+ F+E+ + +L + + L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLA-------DFGVSACMFDTGD-----RQRSRNT 111
Y+H +H D+K NI + + A D+ + MF GD R S
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTIQ 167
G ++A EVLQ + KADI++ +T + A G P ++ ++ Q
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIR------Q 240
Query: 168 NAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
P + + S+ F E++ + + D +RP+A L+KHS
Sbjct: 241 GRLPRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 217
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 277
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 338 SFFDELRDPNVKLPN-GRDTPALFN 361
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DHP++++ + + W++M G H ++ ++ + + + K
Sbjct: 79 MKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICK 136
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ YL +HRD+ NIL+ + VKL DFG+S + D D ++ T + WM+
Sbjct: 137 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIK-WMS 194
Query: 121 PEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
PE + + + +D+W F + E L+ G PF
Sbjct: 195 PESIN-FRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 13 YCSFVVDSNLWVVMPFMAEGSCLHLMK-IAYQDGFEESAIGSILKETLKALDYLHRQGHI 71
YC F + ++ + MP++ S L ++ +++Q+ + + KAL +H+ G +
Sbjct: 87 YC-FRKNDHVVIAMPYLEHESFLDILNSLSFQE------VREYMLNLFKALKRIHQFGIV 139
Query: 72 HRDVKAGNILLDTN-GVVKLADFGVSACMFDT---------GDRQRSRNT---------- 111
HRDVK N L + L DFG++ DT + Q+ R +
Sbjct: 140 HRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSR 199
Query: 112 ------FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSK 155
GTP + APEVL + D+WS G+ L L G PF K
Sbjct: 200 RQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ-----------------DGF 46
++HP+VI+ Y + D L +++ + GS ++ + + D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 47 EESAIG-----SILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD 101
+E A+ S + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 102 TGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMK 160
D R+ WMA E L Y +++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSXVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 161 V--LLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPT 202
+ LL T G +R S+ ++ C ++ KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DHP++++ + + W++M G H ++ ++ + + + K
Sbjct: 63 MKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICK 120
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ YL +HRD+ NIL+ + VKL DFG+S + D D ++ T + WM+
Sbjct: 121 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIK-WMS 178
Query: 121 PEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
PE + + + +D+W F + E L+ G PF
Sbjct: 179 PESIN-FRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ--DGFEESAIGSILKETLKALD 63
H +V+R + ++ D ++ + + GS + Y+ F+E+ + +L + + L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLA-------DFGVSACMFDTGD-----RQRSRNT 111
Y+H +H D+K NI + + A D+ + MF GD R S
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTIQ 167
G ++A EVLQ + KADI++ +T + A G P ++ ++ Q
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIR------Q 240
Query: 168 NAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
P + + S+ F E++ + + D +RP+A L+KHS
Sbjct: 241 GRLPRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 4 IDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ-----------------DGF 46
++HP+VI+ Y + D L +++ + GS ++ + + D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 47 EESAIG-----SILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFD 101
+E A+ S + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 102 TGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMK 160
D R+ WMA E L Y +++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSYVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 161 V--LLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPT 202
+ LL T G +R S+ ++ C ++ KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDT-GDRQRSR 109
+ L + L+ L Y+H IHRD+K N+L++ N +K+ DFG++ + + + Q
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFG 140
+V T + APE++ Y D+WS G
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 54 ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDT-GDRQRSRNTF 112
L + L+ L Y+H IHRD+K N+L++ N +K+ DFG++ + + + Q +
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL 146
V T + APE++ Y D+WS G E+
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 195
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQN-APPG 172
+ + APE++ + Y S D+WS G EL G F + L+ I+ P
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 255
Query: 173 LDYDRDK-------KF--------SKSFK-----EMVAMC---LVKDQTKRPTAEKLLKH 209
+ R+ KF +K F+ E +A+C L T R T + H
Sbjct: 256 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 210 SFFKHAKPPELSVKKLFADLPPLWN 234
SFF + P + + D P L+N
Sbjct: 316 SFFDELRDPNVKLPN-GRDTPALFN 339
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 6 HPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQ--DGFEESAIGSILKETLKALD 63
H +V+R + ++ D ++ + + GS + Y+ F+E+ + +L + + L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLA-------DFGVSACMFDTGD-----RQRSRNT 111
Y+H +H D+K NI + + A D+ + MF GD R S
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 112 FVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF----SKYPPMKVLLMTIQ 167
G ++A EVLQ + KADI++ +T + A G P ++ ++ Q
Sbjct: 190 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIR------Q 242
Query: 168 NAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFF 212
P + + S+ F E++ + + D +RP+A L+KHS
Sbjct: 243 GRLPRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ + +T D R +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPV 196
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 252 DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL--HPSFPEVS 298
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGS---CLHLMKIAYQDGFEESAIGSILKE 57
+S+ H N++R + + +V P+MA GS CL + Q + I
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALG 139
Query: 58 TLKALDYLHRQGH---IHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
+ + L YLH IHRDVKA NILLD + DFG++ M D D G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXH-VXXAVRG 197
Query: 115 TPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+APE L G + K D++ +G+ LEL G F
Sbjct: 198 XIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAF 235
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HR++ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 197
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 198 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 252
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 253 DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL--HPSFPEVS 299
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 73 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 130
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-----SIL 55
+S +H N++R + ++++ MA G ++ + S++ +
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNG---VVKLADFGVSACMFDTGDRQRSRNTF 112
++ YL IHRD+ A N LL G V K+ DFG++ ++ G ++
Sbjct: 165 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
+ WM PE G + SK D WSFG+ E+ + G+ P+
Sbjct: 225 LPVK-WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-----SIL 55
+S +H N++R + ++++ MA G ++ + S++ +
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNG---VVKLADFGVSACMFDTGDRQRSRNTF 112
++ YL IHRD+ A N LL G V K+ DFG++ ++ G ++
Sbjct: 188 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
+ WM PE G + SK D WSFG+ E+ + G+ P+
Sbjct: 248 LPVK-WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 1 MSLIDHPNVIRAYCSF--------VVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG 52
M +DH N++R F VV NL V+ ++ E + ++A + +
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNL--VLDYVPET----VYRVARHYSRAKQTLP 120
Query: 53 SI-----LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQ 106
I + + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN 179
Query: 107 RSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
S + + + APE++ + Y S D+WS G EL G F
Sbjct: 180 VSX---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M +DHP++++ + + W++M G H ++ ++ + + + K
Sbjct: 67 MKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICK 124
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMA 120
A+ YL +HRD+ NIL+ + VKL DFG+S + D D ++ T + WM+
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIK-WMS 182
Query: 121 PEVLQPGSGYNSKADIWSFGITALE-LAHGHAPF 153
PE + + + +D+W F + E L+ G PF
Sbjct: 183 PESIN-FRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HR++ A N ++ + VK+ DFG++ +++T D R +
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPV 196
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 252 DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL--HPSFPEVS 298
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 195
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 202
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 203 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 191
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 192 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 71 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 184
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 185 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ + +T D R +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPV 193
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 194 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 248
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 249 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL--HPSFPEVS 295
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + K
Sbjct: 78 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 135
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG + + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 187
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 188 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
E + YL+ + +HRD+ A N ++ + VK+ DFG++ + +T D R +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPV 196
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE L+ G + + +D+WSFG+ E+ P+ +VL + G
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 176 DRDKKFSKSFKEMVAMCLVKDQTKRPT---AEKLLKHSFFKHAKPPELS 221
D+ + +++ MC + RPT LLK H PE+S
Sbjct: 252 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL--HPSFPEVS 298
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 9 VIRAYCSFVVDS-----NLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLKALD 63
+IR Y + D L++V+ +A+ L K E I +IL L +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPI--FLTEEHIKTILYNLLLGEN 143
Query: 64 YLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDR------------------ 105
++H G IHRD+K N LL+ + VK+ DFG++ + D
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 106 -QRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-----AHGHAPFSKYP 157
++ + V T + APE++ Y DIWS G EL +H + P +++P
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 55 LKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSRNTFV 113
+ + ++L Y+H G HRD+K N+LLD + V+KL DFG SA G+ S +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---I 183
Query: 114 GTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
+ + APE++ + Y S D+WS G EL G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIGSILKETLK 60
M+ +D+P+V R + S + ++ M G L ++ ++D + + + +
Sbjct: 68 MASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAE 125
Query: 61 ALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVG-TPC-W 118
++YL + +HRD+ A N+L+ T VK+ DFG++ + G ++ + G P W
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 182
Query: 119 MAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYP 157
MA E + Y ++D+WS+G+T EL G P+ P
Sbjct: 183 MALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMK---------IAYQDGFEESAI 51
M+ D+PN+++ V + ++ +MA G ++ +++ D + +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 52 GS-------------ILKETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSAC 98
S I ++ + YL + +HRD+ N L+ N VVK+ADFG+S
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 99 MFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
++ + N + WM PE + + Y +++D+W++G+ E+ ++G P+
Sbjct: 224 IYSADYYKADGNDAIPIR-WMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 4 IDHPNVIRAYC--SFVVDSNLWVVMPFMAEGSCLHLMK---IAYQDGFEESAIGSILKET 58
++H N+++ + + ++M F GS +++ AY G ES +L++
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDV 121
Query: 59 LKALDYLHRQGHIHRDVKAGNILL----DTNGVVKLADFGVSACMFDTGDRQRSRNTFVG 114
+ +++L G +HR++K GNI+ D V KL DFG + + D D Q + G
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFV--SLYG 177
Query: 115 TPCWMAPEVLQPG-------SGYNSKADIWSFGITALELAHGHAPFSKY 156
T ++ P++ + Y + D+WS G+T A G PF +
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 183
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 184 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K + +L + IHRD+ A NILL + K+ DFG++ + + + N +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE + Y ++D+WS+GI EL + G +P YP M V
Sbjct: 236 -WMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP---YPGMPV-------------- 276
Query: 176 DRDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLK 208
D KF K KE M C D KRPT +++++
Sbjct: 277 --DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 183
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 184 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K + +L + IHRD+ A NILL + K+ DFG++ + + + N +
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE + Y ++D+WS+GI EL + G +P YP M V
Sbjct: 229 -WMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP---YPGMPV-------------- 269
Query: 176 DRDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLK 208
D KF K KE M C D KRPT +++++
Sbjct: 270 --DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 184
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 185 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K + +L + IHRD+ A NILL + K+ DFG++ + + + N +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE + Y ++D+WS+GI EL + G +P YP M V
Sbjct: 236 -WMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP---YPGMPV-------------- 276
Query: 176 DRDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLK 208
D KF K KE M C D KRPT +++++
Sbjct: 277 --DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K + +L + IHRD+ A NILL + K+ DFG++ + + + N +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE + Y ++D+WS+GI EL + G +P YP M V
Sbjct: 231 -WMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP---YPGMPV-------------- 271
Query: 176 DRDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLK 208
D KF K KE M C D KRPT +++++
Sbjct: 272 --DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-----SIL 55
+S +H N++R + +++M MA G ++ + S++ +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNG---VVKLADFGVSACMFDTGDRQRSRNTF 112
++ YL IHRD+ A N LL G V K+ DFG++ ++ ++
Sbjct: 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
+ WM PE G + SK D WSFG+ E+ + G+ P+
Sbjct: 207 LPVK-WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 57 ETLKALDYLHRQGHIHRDVKAGNILLDTNGVVKLADFGVSACMFDTGDRQRSRNTFVGTP 116
+ K + +L + IHRD+ A NILL + K+ DFG++ + + + N +
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 117 CWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTIQNAPPGLDY 175
WMAPE + Y ++D+WS+GI EL + G +P YP M V
Sbjct: 213 -WMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP---YPGMPV-------------- 253
Query: 176 DRDKKFSKSFKEMVAM----------------CLVKDQTKRPTAEKLLK 208
D KF K KE M C D KRPT +++++
Sbjct: 254 --DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLDTN-GVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H QG +HRDVK N+++D ++L D+G+ A + G +
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 203
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 204 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-----SIL 55
+S +H N++R + +++M MA G ++ + S++ +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNG---VVKLADFGVSACMFDTGDRQRSRNTF 112
++ YL IHRD+ A N LL G V K+ DFG++ ++ ++
Sbjct: 162 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
+ WM PE G + SK D WSFG+ E+ + G+ P+
Sbjct: 222 LPVK-WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 51 IGSILKETLKALDYLHRQGHIHRDVKAGNILLD-TNGVVKLADFGVSACMFDTGDRQRSR 109
I + E LKALDY H G +HRDVK N+L+D + ++L D+G+ A + G +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGL-AEFYHPG---QEY 188
Query: 110 NTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPF 153
N V + + PE+L Y+ D+WS G + PF
Sbjct: 189 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 44 DGFEESAIGSILKETLKALDYLHRQGHIHRDVKAGNILLD--------------TNGV-- 87
+GF I E LKAL+YL + H D+K NILLD T+G
Sbjct: 132 NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191
Query: 88 ---------VKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWS 138
+KL DFG + D + + T + APEV+ G++ +D+WS
Sbjct: 192 QIYRTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVIL-NLGWDVSSDMWS 244
Query: 139 FGITALELAHGHAPFSKYPPMKVLLM---TIQNAPPGLDYDRDK 179
FG EL G F + M+ L M IQ P + Y+ K
Sbjct: 245 FGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK 288
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 1 MSLIDHPNVIRAYCSFVVDSNLWVVMPFMAEGSCLHLMKIAYQDGFEESAIG-----SIL 55
+S +H N++R + ++++ MA G ++ + S++ +
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 56 KETLKALDYLHRQGHIHRDVKAGNILLDTNG---VVKLADFGVSACMFDTGDRQRSRNTF 112
++ YL IHRD+ A N LL G V K+ DFG++ ++ ++
Sbjct: 174 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 113 VGTPCWMAPEVLQPGSGYNSKADIWSFGITALEL-AHGHAPF 153
+ WM PE G + SK D WSFG+ E+ + G+ P+
Sbjct: 234 LPVK-WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPY 273
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,128,892
Number of Sequences: 62578
Number of extensions: 624982
Number of successful extensions: 3875
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1122
Number of HSP's gapped (non-prelim): 1196
length of query: 583
length of database: 14,973,337
effective HSP length: 104
effective length of query: 479
effective length of database: 8,465,225
effective search space: 4054842775
effective search space used: 4054842775
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.4 bits)