Query 007968
Match_columns 583
No_of_seqs 258 out of 1858
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 14:55:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007968.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007968hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3b2ua2 g.3.9.1 (A:481-502) EG 13.3 45 0.0033 19.7 1.7 9 75-83 2-10 (26)
2 d2e74e1 f.23.24.1 (E:1-32) Pet 10.9 1.5E+02 0.011 17.9 3.7 16 509-524 9-24 (32)
3 d1eaka1 a.20.1.2 (A:32-107) Ge 7.9 2.3E+02 0.016 21.0 4.5 36 15-51 13-48 (76)
4 d4cpai_ g.3.2.1 (I:) Carboxype 4.3 2.6E+02 0.019 17.6 2.4 20 77-96 5-24 (37)
5 d1ju8a_ g.3.6.4 (A:) Leginsuli 3.6 2.1E+02 0.015 18.3 1.4 22 74-97 2-23 (37)
6 d1goia1 b.72.2.1 (A:447-498) C 3.2 1.8E+02 0.013 19.7 0.9 11 86-96 2-12 (52)
7 d1wm7a_ g.3.7.2 (A:) Neurotoxi 3.1 2.2E+02 0.016 16.9 1.1 13 71-83 2-14 (29)
8 d1j8ia_ d.9.1.1 (A:) Lymphotac 2.8 3.5E+02 0.025 20.4 2.5 31 536-566 54-84 (93)
9 d1n0ua5 d.58.11.1 (A:726-842) 2.5 2.9E+02 0.021 21.4 1.6 18 542-559 94-111 (117)
10 d1fgya_ b.55.1.1 (A:) Grp1 {Mo 2.5 58 0.0042 24.9 -3.0 27 6-33 4-30 (127)
No 1
>d3b2ua2 g.3.9.1 (A:481-502) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.34 E-value=45 Score=19.72 Aligned_cols=9 Identities=44% Similarity=0.981 Sum_probs=7.2
Q ss_pred CCCCCCCCC
Q 007968 75 CIPLCSDPN 83 (583)
Q Consensus 75 ~~~~~~~~~ 83 (583)
|-++|+++-
T Consensus 2 chplcsseg 10 (26)
T d3b2ua2 2 CHALCSPEG 10 (26)
T ss_dssp CCTTCCTTC
T ss_pred cccccCcCc
Confidence 778898884
No 2
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=10.86 E-value=1.5e+02 Score=17.93 Aligned_cols=16 Identities=19% Similarity=0.613 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 007968 509 LILMPMTYSVAYGLIG 524 (583)
Q Consensus 509 iv~~plt~sI~~GIa~ 524 (583)
++++.+.++|+.||++
T Consensus 9 ivfialffgiavgiif 24 (32)
T d2e74e1 9 IVFIALFFGIAVGIIF 24 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhee
Confidence 3444455555555543
No 3
>d1eaka1 a.20.1.2 (A:32-107) Gelatinase A (MMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.86 E-value=2.3e+02 Score=21.04 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=24.5
Q ss_pred hhhHHHHhhhhhhcccccccCCchhHHHHHhHHHHHH
Q 007968 15 KINTFVANSRAGKRFKLAERNTSFTTELRAGTATFLT 51 (583)
Q Consensus 15 ~~~~~~~~~~~~~~F~~~~r~t~~~~Ei~aG~~tfl~ 51 (583)
+-|...+.++|+||+.+.+++.+. .++...+..|-.
T Consensus 13 ~~d~e~A~~YL~~fgyl~~~~~~~-~~l~~ai~~~Q~ 48 (76)
T d1eaka1 13 KTDKELAVQYLNTFYGCPKESCNL-FVLKDTLKKMQK 48 (76)
T ss_dssp CCHHHHHHHHHHHHTCCCSSCCCH-HHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhCCCCcCCCcc-HHHHHHHHHHHH
Confidence 457778889999999998876543 345555544443
No 4
>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}
Probab=4.28 E-value=2.6e+02 Score=17.61 Aligned_cols=20 Identities=30% Similarity=0.788 Sum_probs=10.8
Q ss_pred CCCCCCCCCCCCCCCCCccc
Q 007968 77 PLCSDPNIALPDCTGPSYRI 96 (583)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~ 96 (583)
|+|+.|--.-.||.|.++-+
T Consensus 5 pic~kpc~t~ddcsg~~fcq 24 (37)
T d4cpai_ 5 PICNKPCKTHDDCSGAWFCQ 24 (37)
T ss_dssp TTTTCBCSSSSSSCCCSSCC
T ss_pred cccCCCcccccCccchHHHH
Confidence 34444433344788776644
No 5
>d1ju8a_ g.3.6.4 (A:) Leginsulin {Soybean (Glycine max) [TaxId: 3847]}
Probab=3.58 E-value=2.1e+02 Score=18.29 Aligned_cols=22 Identities=36% Similarity=0.774 Sum_probs=15.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccc
Q 007968 74 DCIPLCSDPNIALPDCTGPSYRIV 97 (583)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~ 97 (583)
||..+||+ |..|.|-...-|-|
T Consensus 2 ~C~G~Csp--FemPpc~s~dCRCi 23 (37)
T d1ju8a_ 2 DCNGACSP--FEVPPCRSRDCRCV 23 (37)
T ss_dssp CSCSEECS--SSSSSSSCTTSEEE
T ss_pred Cccccccc--cccCCCCCCCceEE
Confidence 67788875 45678876666655
No 6
>d1goia1 b.72.2.1 (A:447-498) Chitinase B, C-terminal domain {Serratia marcescens [TaxId: 615]}
Probab=3.16 E-value=1.8e+02 Score=19.72 Aligned_cols=11 Identities=45% Similarity=0.661 Sum_probs=6.8
Q ss_pred CCCCCCCCccc
Q 007968 86 LPDCTGPSYRI 96 (583)
Q Consensus 86 ~~~~~~~~~~~ 96 (583)
||-|++|.|-+
T Consensus 2 lPic~APAYv~ 12 (52)
T d1goia1 2 LPIMTAPAYVP 12 (52)
T ss_dssp CCBCCCCBCCT
T ss_pred CCcccccceec
Confidence 56677766643
No 7
>d1wm7a_ g.3.7.2 (A:) Neurotoxin bmp01 {Chinese scorpion (Buthus martensii karsch) [TaxId: 34649]}
Probab=3.09 E-value=2.2e+02 Score=16.91 Aligned_cols=13 Identities=31% Similarity=0.759 Sum_probs=9.7
Q ss_pred CCCCCCCCCCCCC
Q 007968 71 SASDCIPLCSDPN 83 (583)
Q Consensus 71 ~~~~~~~~~~~~~ 83 (583)
+|.||-+-|++++
T Consensus 2 ~cedcpehc~tq~ 14 (29)
T d1wm7a_ 2 TCEDCPEHCATQN 14 (29)
T ss_dssp CGGGSTTTTTTTT
T ss_pred ccccchHHhhhhh
Confidence 3557888888886
No 8
>d1j8ia_ d.9.1.1 (A:) Lymphotactin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.83 E-value=3.5e+02 Score=20.44 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=19.0
Q ss_pred HHHHHHhhhhcccccCccCCCcccccccCCC
Q 007968 536 DWAEILSRRVGIGKRSKANNPSLKEEATNGN 566 (583)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (583)
.|+-++++++.++...++|+-..++..++..
T Consensus 54 ~WVq~~ik~Ld~k~~~~~~~~~~~~~~~~~~ 84 (93)
T d1j8ia_ 54 TWVRDVVRSMDRKSNTRNNMIQTKPTGTQQS 84 (93)
T ss_dssp HHHHHHHHHHHHHTTTTSCCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHhhccCCCCCcccCCCCccCC
Confidence 4788888887766555555555555444443
No 9
>d1n0ua5 d.58.11.1 (A:726-842) Elongation factor 2 (eEF-2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.51 E-value=2.9e+02 Score=21.38 Aligned_cols=18 Identities=11% Similarity=0.023 Sum_probs=8.6
Q ss_pred hhhhcccccCccCCCccc
Q 007968 542 SRRVGIGKRSKANNPSLK 559 (583)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~ 559 (583)
+.+.|++|.-++..|++.
T Consensus 94 i~~~R~rKgL~~~~p~~~ 111 (117)
T d1n0ua5 94 VLAARKRHGMKEEVPGWQ 111 (117)
T ss_dssp HHHHHHHTTCCSSCCCGG
T ss_pred HHHHHHhCCCCCCCCCHH
Confidence 444455555444444443
No 10
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.46 E-value=58 Score=24.93 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=19.6
Q ss_pred CCCCCChhhhhhHHHHhhhhhhcccccc
Q 007968 6 EPEKPSLPTKINTFVANSRAGKRFKLAE 33 (583)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~F~~~~ 33 (583)
.|||-|++.|.... ..++-.|||.|+.
T Consensus 4 np~keG~L~K~~~~-~k~WkrR~fvL~~ 30 (127)
T d1fgya_ 4 NPDREGWLLKLGGR-VKTWKRRWFILTD 30 (127)
T ss_dssp SCSEEEEEEEECSS-SCCEEEEEEEEET
T ss_pred CCceEEEEEEECCC-CCCcEEEEEEEEC
Confidence 58899999887543 3457788888764
Done!