BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007974
(583 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 190/322 (59%), Gaps = 60/322 (18%)
Query: 219 SMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSG 278
S++TVG SHCGSNQ S+ ++ +S S+R K E TSS G SG
Sbjct: 146 SVITVGPSHCGSNQ-----------STNIHQATTLPVSMSDRSKN-VEERLDTSSGGSSG 193
Query: 279 SSFNRTSKQSTGDNS--LKRKSRDAVDSECQSEA---AGFESG----AGNKTAQRSGSCR 329
S+ R +K++ S + RK + +D++ +S + G S GNK++QRSGS R
Sbjct: 194 CSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTR 253
Query: 330 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQ 389
RSRAAEVHNLSERRRRDRINE+M+ALQELIPHC++TDKAS+LDEAI+YLKSLQ+QL Q
Sbjct: 254 RSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQL---Q 310
Query: 390 VMWMGSGM--------APLMFPGMQH--YMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQS 439
VMWMGSGM +P+MFPG+Q Y+++M M + M S+ P++++S
Sbjct: 311 VMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAM----------QSQMQLSQFPVMNRS 360
Query: 440 MSMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP--------MQ-ANSQP 490
A + ++CQ NPV Q Q QN +EQ ARYMG P MQ QP
Sbjct: 361 ---APQNHPGLVCQ----NPVQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQP 413
Query: 491 MNMFRFGSPTMQNQIVSLPSSS 512
+M FGSP +S P+++
Sbjct: 414 ADMLGFGSPAGPQSQLSAPATT 435
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 1 MNPCIPDWNFEGDIPISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQ 60
M DWNFE + +S + + ++ELVELLW++G VVL SQA +R+PS+ +Q
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQA--RREPSVQVQTHKQ 58
Query: 61 VQKQTLRGSGSC--GNSSNL-------IQDDETVSWIHCPIEDSFE 97
+TLR + N + + D ETVSWI P +D +
Sbjct: 59 ---ETLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVID 101
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 177/327 (54%), Gaps = 50/327 (15%)
Query: 207 SGNLTQGEVRECSMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETI 266
S + + E+ + S+ TVG SHCGSN DLD+S + N + + ++P+ +
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKN--IEEKLNPNASSSSGGS 202
Query: 267 EPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSG 326
+S + T D KRK + D E+ GNK+ QRSG
Sbjct: 203 SGCSFGKDIKEMAS----GRCITTDR--KRKRINHTD-----ESVSLSDAIGNKSNQRSG 251
Query: 327 SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 386
S RRSRAAEVHNLSERRRRDRINE+M+ALQELIPHC+KTDKAS+LDEAI+YLKSLQLQL
Sbjct: 252 SNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQL- 310
Query: 387 MSQVMW------MGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSM 440
QVMW + AP+MFPG+Q + + +P+ R P++DQS
Sbjct: 311 --QVMWMGSGMAAAAASAPMMFPGVQPQQF----------IRQIQSPVQLPRFPVMDQS- 357
Query: 441 SMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP-MQANS--QPMNMFRFG 497
A N ++CQ NPV QN ++++ARY+G P MQA + QPM M RF
Sbjct: 358 --AIQNNPGLVCQ----NPV------QNQIISDRFARYIGGFPHMQAATQMQPMEMLRFS 405
Query: 498 SPTMQNQIVSLPSSSCVPFSGGAATDN 524
SP Q PSS + G+ D+
Sbjct: 406 SPAGQQS--QQPSSVPTKTTDGSRLDH 430
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 8 WNFEGDIPISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLR 67
W+FE + +S + + +ELVELLW++G VVL SQ H E Q QKQ
Sbjct: 6 WSFEENYSLSTNRRSIRPQDELVELLWRDGQVVLQSQT---------HREQTQTQKQD-- 54
Query: 68 GSGSCGNSSNLIQDDETVSWI-HCPIEDSFE-KDFYSQLFSELPP 110
SS ++D ETVSWI + P ED FE DF S FS + P
Sbjct: 55 HHEEALRSSTFLEDQETVSWIQYPPDEDPFEPDDFSSHFFSTMDP 99
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 241/521 (46%), Gaps = 111/521 (21%)
Query: 1 MNPCIPDWNFEGDIPISNQ-----------MKPMGQDNELVELLWQNGHVVLSSQAQTQR 49
M+ +PD++ + D ++N + MG+D++L+ELLWQNG VV+ +Q +
Sbjct: 1 MHHFVPDFDTDDDY-VNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVVQNQRLHTK 59
Query: 50 KPSLNHNEPRQVQKQTLRGSGSCGNSSNLIQDDETVSWIHCPIEDSFEKDFYSQL-FSEL 108
KPS + P ++ + + IQ+DE SW+H P+ D DF S L FS
Sbjct: 60 KPS---SSPPKLLPSMDPQQQPSSDQNLFIQEDEMTSWLHYPLRDD---DFCSDLLFSA- 112
Query: 109 PPSGPMEVDKHTRQLREEKMVKFDPPGAVTSSQHPNVNHSVVPELQRNAMPPPRFEVHDA 168
T ++ PP + T+ P V RN M
Sbjct: 113 -------APTATATATVSQVTAARPPVSSTNESRPPV---------RNFM---------- 146
Query: 169 APQNKNLGDLGKLVNFSQSTAPPKGELGPCSGQFDRKRSGN----LTQGEVRECSMMT-- 222
NFS+ G F+ R G L++ VRE + ++
Sbjct: 147 --------------NFSR-----------LRGDFNNGRGGESGPLLSKAVVRESTQVSPS 181
Query: 223 ----VGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSG 278
+S G + D S + G + K ++ + IE T TSSS S
Sbjct: 182 ATPSAAASESGLTRRTDGTDSSAVAGGGAYNRKGKAVAMT----APAIEITGTSSSVVSK 237
Query: 279 SSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHN 338
S + T + KRK R+A ++ ++E+ E+ + + S +RSRAAEVHN
Sbjct: 238 SEIE---PEKTNVDDRKRKEREATTTD-ETESRSEETKQARVS---TTSTKRSRAAEVHN 290
Query: 339 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMGSGMA 398
LSER+RRDRINE+M+ALQELIP CNK+DKASMLDEAIEY+KSLQLQ+QM M MG GM
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM---MSMGCGMM 347
Query: 399 PLMFPGMQHYMSRMGMGMG-----PPPLPSVTNPMHFSRVPLVDQSMSMAQAQNRAVMCQ 453
P+M+PGMQ YM M MGMG PPP M ++ PL Q+ V
Sbjct: 348 PMMYPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYPV--H 405
Query: 454 ASVLNPVNYQNQMQN---------SNFTEQYARYMGFHPMQ 485
AS + V NQ + + +T+ Y ++ G HP Q
Sbjct: 406 ASDPSRVFVPNQQYDPTSGQPQYPAGYTDPYQQFRGLHPTQ 446
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 207/414 (50%), Gaps = 52/414 (12%)
Query: 27 NELVELLWQNGHVVLSSQAQTQRK---PSLNHNEPRQVQKQTLRGSGSCGNS-------- 75
+E+VEL+W+NG + SQ+ R P N + R++ G+GS
Sbjct: 27 DEVVELVWENGQISTQSQSSRSRNIPPPQANSSRAREI------GNGSKTTMVDEIPMSV 80
Query: 76 ----SNLIQDDETVSWI-HCPIEDSFEKDFYSQLFSELPPS---GPMEVDKHTRQLREEK 127
+ L QDD+ V W+ H P D + DF + S + + M V++ L + +
Sbjct: 81 PSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTVNEQESDMAVNQTAFPLFQRR 140
Query: 128 MVKFDPPGAVTSSQHPNV-NHSVVPELQRNAMP-----PPRFEVHDAAPQNKNLGDLGKL 181
+ A +SSQ+ +HS+ + +P P RF N L
Sbjct: 141 KDGNESAPAASSSQYNGFQSHSLYGSDRARDLPSQQTNPDRFTQTQEPLITSNKP---SL 197
Query: 182 VNFSQSTAPPKGELGPCSGQFDRKRSGNLTQGEVRECSMMTVGSSHCGSNQVAYDLDMSR 241
VNFS P + D K + V + ++ S ++V L+ S
Sbjct: 198 VNFSHFLRPATFAKTTNNNLHDTKEKSPQSPPNVFQTRVLGAKDSE---DKV---LNESV 251
Query: 242 ASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDA 301
AS++ ++ +IS K + E V SS GSG+S + S+ + SLKRK +
Sbjct: 252 ASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPSESPSL--SLKRKHSNI 309
Query: 302 VDSECQSEAAGFESGAGNKTA--QRSG-SCRRSRAAEVHNLSERRRRDRINEKMRALQEL 358
D +C SE ESG G K A R+G +RSR+AEVHNLSERRRRDRINEKMRALQEL
Sbjct: 310 QDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQEL 369
Query: 359 IPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMGSG--MAP-LMF-PGMQHY 408
IP+CNK DKASMLDEAIEYLKSLQLQ+ Q+M M SG + P +MF PGM HY
Sbjct: 370 IPNCNKVDKASMLDEAIEYLKSLQLQV---QIMSMASGYYLPPAVMFPPGMGHY 420
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 191/431 (44%), Gaps = 106/431 (24%)
Query: 16 ISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNS 75
IS + MG+D+ +VELL ++ VV SSQ QT PS + P + LRGSGS
Sbjct: 15 ISPEKYIMGEDD-IVELLGKSSQVVTSSQTQT---PSCD---PPLI----LRGSGSGDGE 63
Query: 76 SN----------------LIQDDETVSWIHCPIEDSFEKDFYSQLFSELPPSGPMEVDKH 119
N IQ+DE SW+H P + L+S+L SG
Sbjct: 64 GNGPLPQPPPPLYHQQSLFIQEDEMASWLHQPNRQDY-------LYSQLLYSG------- 109
Query: 120 TRQLREEKMVKFDPPGAVTSSQHPNVNHSVVPELQRNAMPPPRFEVHDAA--PQNKNLGD 177
+S HP S+ P PPPR + AA P L +
Sbjct: 110 ------------------VASTHPQSLASLEPP------PPPRAQYILAADRPTGHILAE 145
Query: 178 LGKLVNFSQSTAPPKGELGPCSGQFDRKRSGNLTQGEVREC-SMMTVGSSHCGSNQVAYD 236
+ NF R+R GN+ G V S T+ SS S +
Sbjct: 146 R-RAENFMN---------------ISRQR-GNIFLGGVEAVPSNSTLLSSATESIPATHG 188
Query: 237 LDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSL-- 294
+ SRA+ +G V RGK IE T S G + +Q + +
Sbjct: 189 TE-SRATVTGGVSRTFAVPGLGPRGKAVAIETAGTQSWGLCKAETEPVQRQPATETDITD 247
Query: 295 --KRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKM 352
KRK+R+ + E Q G + A+ S S +RSRAA +H LSERRRR +INE M
Sbjct: 248 ERKRKTREETNVENQ----------GTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMM 297
Query: 353 RALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMGSGMA-PLMFPG--MQHYM 409
+ALQEL+P C KTD++SMLD+ IEY+KSLQ Q+QM MG M P+M+ G Q YM
Sbjct: 298 KALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQM---FSMGHVMIPPMMYAGNIQQQYM 354
Query: 410 SRMGMGMGPPP 420
M MGM PP
Sbjct: 355 PHMAMGMNRPP 365
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 12/148 (8%)
Query: 276 GSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQ-----RSGSCRR 330
S S F+R + + SLKRK D + E + + + + Q R +R
Sbjct: 168 ASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKR 227
Query: 331 SRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQV 390
R+ EVH L ER+RRD N+KMRALQ+L+P+C K DKAS+LDEAI+Y+++LQLQ+QM
Sbjct: 228 KRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQM--- 284
Query: 391 MWMGSGMA--PLMFPGMQHYMSRMGMGM 416
M MG+G+ P M P M HY S MG+GM
Sbjct: 285 MSMGNGLIRPPTMLP-MGHY-SPMGLGM 310
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 92/174 (52%), Gaps = 29/174 (16%)
Query: 260 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGN 319
+GK +E T SSG + Q ++ LK + E G
Sbjct: 199 KGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKAR----------------EETHGT 242
Query: 320 KTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLK 379
+ A+ S S +RSR AE+HNL+ERRRR++INEKM+ LQ+LIP CNK+ K S LD+AIEY+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 380 SLQLQLQMSQVMWMGSGMAPLMFPG-MQHYMSRMGMGMGPP----PLPSVTNPM 428
SLQ Q+Q M+P+M G Q +M M M M P P P + PM
Sbjct: 303 SLQSQIQ--------GMMSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFPM 348
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 30/105 (28%)
Query: 25 QDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNSSN------- 77
+++++VELLWQ+G VV ++Q Q +++ P LRGSGS N
Sbjct: 18 REDDIVELLWQSGQVVGTNQTHRQ-----SYDPP-----PILRGSGSGRGEENAPLSQPP 67
Query: 78 --------LIQDDETVSWIHCPIEDSFEKDFY-SQLFSELPPSGP 113
IQ+ E SW+H S+ ++++ S+L + P + P
Sbjct: 68 PHLHQQNLFIQEGEMYSWLH----HSYRQNYFCSELLNSTPATHP 108
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 332 RAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVM 391
RAAEVHNLSE+RRR RINEKM+ALQ LIP+ NKTDKASMLDEAIEYLK LQLQ+QM M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQM-LTM 255
Query: 392 WMGSGMAPLMFPG 404
G + PL PG
Sbjct: 256 RNGINLHPLCLPG 268
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 24/175 (13%)
Query: 318 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 377
G + A+ S S +RSRAAE+HNL+ERRRR++INE+M+ LQ+LIP CNK+ K SML++ IEY
Sbjct: 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEY 195
Query: 378 LKSLQLQL-QMSQVMWMGSGMAPLMFP-GMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPL 435
+KSL++Q+ Q M MG P P Q +M+ +G PP P F +
Sbjct: 196 VKSLEMQINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYPPPRYP-------FPNIQT 248
Query: 436 VDQSMSMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQANSQP 490
D S V Q+ NPV+ Q QM Y +++G H MQ + P
Sbjct: 249 FDPS---------RVWLQSPQPNPVSNQPQM------NPYGQFVGHHQMQQSLPP 288
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 20/108 (18%)
Query: 322 AQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSL 381
A++ S +R+ A+ HNLSE++RR +INEKM+ALQ+LIP+ NKTDKASMLDEAIEYLK L
Sbjct: 83 AKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 382 QLQLQMSQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMH 429
QLQ+Q VM G+G+ P LP V P H
Sbjct: 143 QLQVQTLAVMN--------------------GLGLNPMRLPQVPPPTH 170
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 258 SERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGA 317
S+R +T + TS+S GS DN++ D DS C S +
Sbjct: 156 SQRLTMDTYDVGFTSTSMGSH------------DNTI-----DDHDSVCHSRPQMEDEEE 198
Query: 318 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 377
+ S S +RSRAA +HN SER+RRD+IN++M+ LQ+L+P+ +KTDKASMLDE IEY
Sbjct: 199 KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEY 258
Query: 378 LKSLQLQLQMSQVMWMGS 395
LK LQ Q+ M M M S
Sbjct: 259 LKQLQAQVSMMSRMNMPS 276
>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119
PE=2 SV=2
Length = 544
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 127/258 (49%), Gaps = 32/258 (12%)
Query: 260 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKR-KSRDAVDSECQSEAAGFESGAG 318
RGK E TS SG + + R Q + + K R+ +E Q G
Sbjct: 294 RGKEVATETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQ----------G 343
Query: 319 NKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYL 378
+ A S S +RSRAA++HNLSERRRR+RINE+M+ LQEL+P C KTDK SML++ IEY+
Sbjct: 344 TEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYV 403
Query: 379 KSLQLQLQMSQVMWMGSGMAPLMFPGMQHYMSRMGMGMG----PP---PLPSVT--NPMH 429
KSLQLQ+QM + Q +M M MGM PP P P T P H
Sbjct: 404 KSLQLQIQMMSMGHGMMPPMMHEG-NTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGH 462
Query: 430 FSRV----PLVDQSMSMAQAQNRAVMCQASVL-NPVNYQNQMQNSNFTEQYARYMGFHPM 484
+ V P + QA + + + S+ NPV NQ + + Y++++G H M
Sbjct: 463 MAGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPV--PNQPRFPAYINPYSQFVGLHQM 520
Query: 485 QANSQPMNMFRFGSPTMQ 502
Q P+ G PT Q
Sbjct: 521 QQPPLPLQ----GQPTSQ 534
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 26 DNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNSSN--LIQDDE 83
++++VELLW++G VV S Q Q P + ++T+ S IQ+DE
Sbjct: 108 EDDVVELLWKSGQVVQSIQTQRPIPPPIFRGSGSGGGEETVLPLPPLHPSHQNIFIQEDE 167
Query: 84 TVSWIHCPIEDSFEKDFYS 102
SW++ P+ +D++S
Sbjct: 168 MASWLYHPL----RQDYFS 182
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 54/67 (80%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 387
RR +A + H+++ER RR+RI E+M+ALQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 388 SQVMWMG 394
+ +G
Sbjct: 200 LSMSRLG 206
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 65/95 (68%), Gaps = 5/95 (5%)
Query: 304 SECQSEAAGFESGAGNKTAQRSGS----CRRSRAAEVHNLSERRRRDRINEKMRALQELI 359
++ QS+A + G TAQ RR +A + H+++ER RR+RI E+M++LQEL+
Sbjct: 105 TQTQSQATA-SATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELV 163
Query: 360 PHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMG 394
P+ NKTDKASMLDE I+Y+K LQLQ+++ + +G
Sbjct: 164 PNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 198
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 54/67 (80%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 387
RR +A + H+++ER RR+RI E+M++LQEL+P+ NKTDKASMLDE IEY++ LQLQ+++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 388 SQVMWMG 394
+ +G
Sbjct: 161 LSMSRLG 167
>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
Length = 363
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Query: 324 RSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQL 383
R +R R AE +N ER +R+ IN+KMR LQ L+P+ +K D SMLDEAI Y+ +LQL
Sbjct: 180 RKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQL 239
Query: 384 QLQMSQVMWMGSGMAP--LMFPGMQHYMSRMGMGMG 417
Q+QM M MG+ +M P +Y S+MG+ MG
Sbjct: 240 QVQM---MTMGNRFVTPSMMMPLGPNY-SQMGLAMG 271
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 7/96 (7%)
Query: 314 ESGAGNKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRALQELIPHCNKTDKASML 371
E G +K +G R SR A +L R+RR+RINE++R LQ L+P+ K D ++ML
Sbjct: 223 EDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTML 282
Query: 372 DEAIEYLKSLQLQLQM--SQVMWMGSGMAPLMFPGM 405
+EA++Y+K LQLQ+++ S +WM AP+ + GM
Sbjct: 283 EEAVQYVKFLQLQIKLLSSDDLWM---YAPIAYNGM 315
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 12/112 (10%)
Query: 303 DSECQSEAAGFESGAG-----NKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRAL 355
+S C + G E + +K +G R SR A +L R+RR+RINE++R L
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 295
Query: 356 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQM--SQVMWMGSGMAPLMFPGM 405
Q L+P+ K D ++ML+EA+ Y+K LQLQ+++ S +WM AP+ F GM
Sbjct: 296 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPIAFNGM 344
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 14/125 (11%)
Query: 269 TVTSSSGGSGSSF-----NRTSKQS-TGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTA 322
+VT+S+ G+ S+ R+ K + TGD R + D+E + E+G N
Sbjct: 105 SVTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSN--- 161
Query: 323 QRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQ 382
RR RAA +HN SERRRRDRIN++MR LQ+L+P +K DK S+LD+ IE+LK LQ
Sbjct: 162 -----GRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ 216
Query: 383 LQLQM 387
Q+Q
Sbjct: 217 AQVQF 221
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 11/78 (14%)
Query: 340 SERRRRD-RINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMGSGMA 398
S+RRRRD +++ KMR LQ+L+P+C+KTDK S+LD+ IEY+K+LQLQLQM + G+
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTV----GVN 196
Query: 399 PLMFPGMQHYMSRMGMGM 416
P P +G GM
Sbjct: 197 PYFLPAT------LGFGM 208
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 255 ISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE 314
+ +E +E + T +++ GS S + S N+ K + R A +S E G E
Sbjct: 57 VDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKE--GVE 114
Query: 315 SGAGNKTAQRSGS------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 362
K Q+ GS RR +A + H+L+ER RR++I+E+MR LQ L+P C
Sbjct: 115 GRKSKK--QKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGC 172
Query: 363 NK-TDKASMLDEAIEYLKSLQLQLQMSQVMWMGSGMAPLMF 402
+K T KA MLDE I Y+++LQ Q++ + + ++P+++
Sbjct: 173 DKVTGKALMLDEIINYVQTLQTQVEFLSMKL--TSISPVVY 211
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 271 TSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGS--- 327
+ SSGG+G + + S+ S K++ R D E + + + + A ++ S
Sbjct: 152 SQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query: 328 -------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDE 373
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE
Sbjct: 212 PSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDE 271
Query: 374 AIEYLKSLQLQLQMSQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLP 422
I Y++SLQ Q++ + S + P++ ++ +++ + P P
Sbjct: 272 IINYVQSLQCQIEFLSMKL--SAVNPVLDFNLESLLAKDALQSSAPTFP 318
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 387 M 387
Sbjct: 268 F 268
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 387 MSQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSMAQAQ 446
M + S L F M + PS N MH +V +D S
Sbjct: 320 FLS-MKLSSVNTRLDF--------NMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGD 370
Query: 447 NRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQAN 487
+ Q LNP N + N T + ++ P A+
Sbjct: 371 HHNKNLQ---LNPDISSNNVINPLETSETRSFISHLPTLAH 408
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
Query: 387 M 387
Sbjct: 365 F 365
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 297 KSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQ 356
+S + +S +A G S K+ +R R A++ +L R+RR+RIN++++ LQ
Sbjct: 104 QSLSSYNSSDDEKALGLVSNTS-KSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQ 162
Query: 357 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQM--SQVMWMGSGMAPLMFPGM 405
L+P+ K D ++ML++A+ Y+K LQLQ+++ S+ +WM APL G+
Sbjct: 163 SLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWM---YAPLAHNGL 210
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++I E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 387 M 387
Sbjct: 363 F 363
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++I+E+M LQ+L+P CN+ T KA MLDE I Y++SLQ Q++
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 387 M 387
Sbjct: 253 F 253
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+++ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 387 M 387
Sbjct: 234 F 234
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 29/177 (16%)
Query: 226 SHCGSNQVAYDLDMSRAS-------SSGLNDDVRKVISPS-ERGKTETIEPTVTSSSGGS 277
S G NQ D D++ A+ S L+ V + IS + +R + E+ + S+ G S
Sbjct: 36 SFVGPNQFG-DADLTTAANGDPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGAS 94
Query: 278 GSSFNRTSKQSTGDNSLKRKSRDAV-DSECQSEAAGFESGAGNKTAQRSGS-----CRRS 331
G+N KR+ D V D + ++E+ G E+ + + + RR
Sbjct: 95 -----------EGEN--KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRG 141
Query: 332 RAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQM 387
+A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ Q++
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 387 M----SQVMWMGSGMAPLM--FP 403
+V+ G+ P + FP
Sbjct: 215 FLSMKLEVVNSGASTGPTIGVFP 237
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Query: 283 RTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSER 342
+ + S+ N++ + + VD + S ++ E + ++ + + + A + +L R
Sbjct: 125 KKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGT-ATDPQSLYAR 183
Query: 343 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM--SQVMWMGSGMAPL 400
+RR++INE+++ LQ L+P+ K D ++ML+EA+ Y+K LQLQ+++ S +WM APL
Sbjct: 184 KRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPL 240
Query: 401 MFPGM 405
+ G+
Sbjct: 241 AYNGL 245
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 387 M 387
Sbjct: 203 F 203
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++ LQ Q++
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 387 M 387
Sbjct: 247 F 247
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 15/138 (10%)
Query: 276 GSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE---------SGAGNKTAQRSG 326
G G F R G S KR S D VD+ C S F S T+ R
Sbjct: 89 GKGPGFLRPEG---GHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPR 145
Query: 327 -SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 385
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+M+DE ++Y+K L+LQ+
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQV 205
Query: 386 QMSQVMWMG--SGMAPLM 401
++ + +G +APL+
Sbjct: 206 KVLSMSRLGGAGAVAPLV 223
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+++ER RR +INE+++ LQ+++P C KT A+MLDE I Y++SLQ Q++
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 387 M 387
Sbjct: 209 F 209
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR +INE++R LQ+++P C K A+MLDE I Y++SLQ Q++
Sbjct: 147 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Query: 387 M 387
Sbjct: 207 F 207
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 12/123 (9%)
Query: 291 DNSLKRKSRDAVDSECQSEAAGFESGAGNKTA-----QRSG-----SCRRSRAAEVHNLS 340
D + KR D +D+ C S F ++ A Q+S RR +A + H+++
Sbjct: 99 DETGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIA 158
Query: 341 ERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMSQVMWMG--SGMA 398
ER RR+RI E++R+LQEL+P NKTD+A+M+DE ++Y+K L+LQ+++ + +G +A
Sbjct: 159 ERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVA 218
Query: 399 PLM 401
PL+
Sbjct: 219 PLV 221
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTD-KASMLDEAIEYLKSLQLQLQ 386
RR +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I ++++LQ Q++
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
Query: 387 M 387
M
Sbjct: 247 M 247
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 386
+R +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 387 M 387
Sbjct: 166 F 166
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 337 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 386
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ ++Q
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ 455
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 316 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 375
G+ K +G R + H L+ER+RR ++NE++ AL L+P KTDKA++L++AI
Sbjct: 112 GSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAI 171
Query: 376 EYLKSLQ---LQLQMSQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSR 432
++LK LQ +L+ +V+ + ++ Q Y+ +
Sbjct: 172 KHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDE 231
Query: 433 VPLVDQSMSMAQAQ 446
V + Q+M M +A+
Sbjct: 232 VSIFKQTMPMIEAR 245
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 329 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K+LQ Q+Q
Sbjct: 184 KRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQ 242
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 316 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 375
GA +G+ + A + H +SER+RR+++NE L+ L+P ++ +KAS+L E I
Sbjct: 398 GAWESCGGATGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETI 457
Query: 376 EYLKSLQLQLQ 386
YLK LQ ++Q
Sbjct: 458 AYLKELQRRVQ 468
>sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis thaliana GN=BHLH109
PE=2 SV=1
Length = 185
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 329 RRSRAAEVHNLSERRRRDRINEKMRALQELIP-HCNKTDKASMLDEAIEYLKSLQLQLQM 387
+R R+ E + E++RR I +K+ LQ L+P HC K D AS L+ IEY+KSL+ Q+
Sbjct: 64 KRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQV-- 121
Query: 388 SQVMWMGSGMAPLMFP 403
VM M P+ P
Sbjct: 122 -DVMSMAYTTTPVYTP 136
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 337 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 386
H + E++RR+++NE+ L+++IP NK DK S+LD+ IEYL+ L+ ++Q
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQ 491
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 339 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 387
L+ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K LQ+Q+++
Sbjct: 214 LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKV 262
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 328 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 386
+R A +++ER RR RI+E+MR LQEL+P+ +K T+ + MLD A++Y+K LQ Q +
Sbjct: 281 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYK 340
Query: 387 M 387
+
Sbjct: 341 I 341
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 316 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 375
G G K S R A+ H L+ER+RR++++EK AL L+P K DK ++LD+AI
Sbjct: 99 GRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158
Query: 376 EYLKSLQLQLQ 386
+K LQ QL+
Sbjct: 159 SRMKQLQEQLR 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 222,352,043
Number of Sequences: 539616
Number of extensions: 9423956
Number of successful extensions: 29450
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 28136
Number of HSP's gapped (non-prelim): 1210
length of query: 583
length of database: 191,569,459
effective HSP length: 123
effective length of query: 460
effective length of database: 125,196,691
effective search space: 57590477860
effective search space used: 57590477860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)